DPY19L3

General Information

Gene Name : DPY19L3
Gene ID : ENSG00000178904.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DPY19L3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DPY19L3	ENSG00000178904.18	10.37	12.55	11.46	ENCSR000AEF
HepG2	DPY19L3	ENSG00000178904.18	17.01	16.52	16.77	ENCSR985KAT
K562	DPY19L3	ENSG00000178904.18	18.05	21.16	19.61	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DPY19L3 is not avaliable on ENCORE database.

Proteins bound to RNA

DPY19L3 RNA is bound by 17 proteins.

CanvasJS.com

eCLIP assay for DPY19L3 is not avaliable on ENCORE database.

17 proteins are bound to DPY19L3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	32976286	32976383	+	3'-UTR	5.96767	18.44503	K562	TARDBP
chr19	32902174	32902273	+	CDS	3.66816	10.50604	HepG2	BCLAF1
chr19	32899180	32899266	+	CDS,intron-Proximal	3.72345	10.27253	HepG2	PPIG
chr19	32899200	32899262	+	CDS	3.20148	6.91872	HepG2	BCLAF1
chr19	32958549	32958577	+	intron-Distal,intron-Proximal	5.06631	6.75320	K562	AQR
chr19	32973364	32973483	+	3'-UTR	4.90490	6.71516	K562	TARDBP
chr19	32968376	32968437	+	3'-UTR,CDS,intron-Proximal	3.77068	6.39986	K562	SF3B4
chr19	32949040	32949079	+	CDS	4.14938	6.22576	HepG2	BCLAF1
chr19	32975496	32975575	+	3'-UTR	4.70780	6.13324	HepG2	IGF2BP1
chr19	32902162	32902283	+	CDS,intron-Proximal	3.01550	6.01489	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 39 entries

eCLIP assay for DPY19L3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DPY19L3 is not available on ENCORE database.
107 RBPs can affect the levels of DPY19L3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DPY19L3 is not available on ENCORE database.

107 RBPs can affect the gene expression of DPY19L3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DPY19L3	ENSG00000178904.14	1698.12590	867.64590	0.96870	24.82270	23.37010	HepG2	TAF15
DPY19L3	ENSG00000178904.14	572.69410	1106.15910	-0.94970	24.03910	22.55430	HepG2	PUS1
DPY19L3	ENSG00000178904.14	957.02740	2076.88760	-1.11780	22.26460	20.78380	K562	AQR
DPY19L3	ENSG00000178904.14	700.05250	1470.69090	-1.07100	22.50400	20.48910	K562	SRSF1
DPY19L3	ENSG00000178904.14	688.79600	1348.92060	-0.96970	21.91080	19.56530	K562	HNRNPU
DPY19L3	ENSG00000178904.14	1354.14340	2651.80070	-0.96960	19.98170	17.70790	K562	PUF60
DPY19L3	ENSG00000178904.14	1309.55190	785.32990	0.73760	16.75900	15.60600	HepG2	SRSF9
DPY19L3	ENSG00000178904.14	395.80910	1183.84590	-1.58060	16.25760	14.97690	HepG2	PUF60
DPY19L3	ENSG00000178904.14	617.99260	1074.59960	-0.79810	15.63130	14.37980	HepG2	UTP3
DPY19L3	ENSG00000178904.14	1014.65630	1873.15770	-0.88450	15.65300	13.88120	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DPY19L3 is not available on ENCORE database.

8 RBPs can affect the splicing of DPY19L3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DPY19L3	ENSG00000178904.14	chr19	+	32929848	32929916	32928099	32928245	32930017	32930141	0.13900	0.00000	0.00035	included	K562	HNRNPL
SE	DPY19L3	ENSG00000178904.14	chr19	+	32929848	32929916	32928099	32928245	32930017	32930141	0.20500	0.00000	0.00000	included	K562	SF3B1
SE	DPY19L3	ENSG00000178904.14	chr19	+	32929848	32929916	32928099	32928245	32930017	32930141	0.25700	0.00001	0.00101	included	HepG2	HNRNPL
SE	DPY19L3	ENSG00000178904.14	chr19	+	32958379	32958532	32955633	32955690	32959636	32959719	0.58900	0.00002	0.00250	included	HepG2	SRSF9
A3SS	DPY19L3	ENSG00000178904.14	chr19	+	32930681	32930816	32930725	32930816	32930122	32930141	-0.28400	0.00007	0.05857	shorter	K562	ZC3H8
A3SS	DPY19L3	ENSG00000178904.14	chr19	+	32958379	32959719	32959636	32959719	32955633	32955690	0.56700	0.00009	0.03914	longer	HepG2	SRSF9
SE	DPY19L3	ENSG00000178904.14	chr19	+	32958379	32958532	32955633	32955690	32959636	32959719	0.62700	0.00018	0.01765	included	HepG2	HNRNPL
SE	DPY19L3	ENSG00000178904.14	chr19	+	32929848	32929916	32928099	32928245	32930017	32930141	0.13000	0.00022	0.05020	included	K562	HNRNPA1
A3SS	DPY19L3	ENSG00000178904.14	chr19	+	32958379	32959719	32959636	32959719	32955633	32955690	0.62300	0.00022	0.08651	longer	HepG2	HNRNPL
SE	DPY19L3	ENSG00000178904.14	chr19	+	32945844	32945946	32944050	32944182	32949005	32949079	-0.45200	0.00038	0.00535	excluded	K562	AQR

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DPY19L3

General Information

Functions

Localization

Domains (AlphaFold: DPY19L3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DPY19L3 is not avaliable on ENCORE database.

17 proteins are bound to DPY19L3 RNA:

eCLIP assay for DPY19L3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DPY19L3 is not available on ENCORE database.

107 RBPs can affect the gene expression of DPY19L3 :

The Knockdown/knockout RNA-Seq assay for DPY19L3 is not available on ENCORE database.

8 RBPs can affect the splicing of DPY19L3 :

The Knockdown/knockout RNA-Seq assay for DPY19L3 is not avaliable on ENCORE database.