PET100

General Information

Gene Name       : PET100
Gene ID             : ENSG00000229833.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PET100)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PET100ENSG00000229833.929.8958.2344.06ENCSR000AEF
HepG2PET100ENSG00000229833.941.4734.9338.20ENCSR985KAT
K562PET100ENSG00000229833.957.6451.9054.77ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PET100 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PET100 RNA is bound by 10 proteins.  







eCLIP assay for PET100 is not avaliable on ENCORE database.





10 proteins are bound to PET100 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1976963597696425+3'-UTR,CDS,intron-Distal3.782977.16338HepG2LARP4
chr1976957887695844+3'-UTR,CDS,intron-Distal,intron-Proximal4.895794.65563K562AQR
chr1976963097696370+3'-UTR,CDS,intron-Distal,intron-Proximal3.407154.41130K562AQR
chr1976957077695731+CDS,intron-Proximal4.643544.01795HepG2LARP4
chr1976957487695797+CDS,intron-Proximal4.534895.66249K562TIA1
chr1976957087695733+CDS,intron-Proximal4.943215.94584K562PABPC4
chr1976954827695546+CDS,intron-Distal,intron-Proximal4.229226.41658K562APOBEC3C
chr1976954757695545+CDS,intron-Distal5.541138.76030HepG2LARP4
chr1976954737695542+CDS,intron-Distal3.318726.08510K562SND1
chr1976955197695546+CDS,intron-Distal,intron-Proximal5.400768.52455K562PABPC4
chr1976947197694807+CDS,intron-Proximal3.873847.56654HepG2PRPF8
chr1976954567695550+CDS,intron-Distal,intron-Proximal3.100978.41726K562DDX55
chr1976954747695546+CDS,intron-Distal,intron-Proximal4.173683.49905HepG2PPIG
chr1976957087695733+CDS,intron-Proximal4.791996.34559K562APOBEC3C
chr1976956967695788+CDS,intron-Proximal4.5066612.46803K562AQR
chr1976947837694862+intron-Distal,intron-Proximal3.184883.18246K562PRPF8
chr1976947567694838+intron-Proximal3.856933.39593HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PET100 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PET100 is not available on ENCORE database.

  • 84 RBPs can affect the levels of PET100.  








The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.





84 RBPs can affect the gene expression of PET100 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PET100ENSG00000229833.5336.49940213.489300.656302.780002.01340HepG2CNOT7
PET100ENSG00000229833.5194.45080128.754300.594702.217801.59390HepG2CPSF6
PET100ENSG00000229833.5330.28740438.68660-0.409501.952601.41830HepG2DDX3X
PET100ENSG00000229833.5280.81590376.97270-0.424801.815001.30400HepG2DDX6
PET100ENSG00000229833.5135.44940197.82650-0.546502.220201.34240HepG2DHX30
PET100ENSG00000229833.5271.81060362.26220-0.414401.811801.31970HepG2EIF2S1
PET100ENSG00000229833.5183.91240262.52180-0.513402.596801.55040HepG2EIF3G
PET100ENSG00000229833.5250.90520389.84860-0.635802.973802.26220HepG2EIF4B
PET100ENSG00000229833.5306.68370473.74140-0.627305.474304.36320HepG2EIF4G1
PET100ENSG00000229833.5289.08690453.80700-0.650603.452202.55040HepG2EIF4G2
PET100ENSG00000229833.5272.13080465.20610-0.773607.629206.71420HepG2ETF1
PET100ENSG00000229833.5215.48940310.54850-0.527202.778301.99020HepG2FUBP3
PET100ENSG00000229833.5277.38390397.94570-0.520702.788701.89420HepG2G3BP2
PET100ENSG00000229833.5128.68060208.47780-0.696102.766401.86790HepG2GEMIN5
PET100ENSG00000229833.5288.20960368.50800-0.354601.952401.34320HepG2HNRNPF
PET100ENSG00000229833.5337.53110437.37150-0.373802.282401.66200HepG2HNRNPL
PET100ENSG00000229833.5238.43650380.85950-0.675704.040403.23860HepG2IGF2BP2
PET100ENSG00000229833.5258.67570406.42930-0.651903.623802.91020HepG2MATR3
PET100ENSG00000229833.5301.18280415.97760-0.465902.285201.70750HepG2NCBP2
PET100ENSG00000229833.5116.87160248.15950-1.086302.870201.75440HepG2NONO
PET100ENSG00000229833.5184.55340370.33880-1.004807.775906.58080HepG2PABPC4
PET100ENSG00000229833.5219.35670320.28550-0.546103.673602.99550HepG2PCBP1
PET100ENSG00000229833.5242.87140325.89030-0.424202.305001.79700HepG2PTBP1
PET100ENSG00000229833.5298.31590454.51410-0.607504.267703.54620HepG2PUF60
PET100ENSG00000229833.5348.30860482.13980-0.469103.066802.35990HepG2PUM2
PET100ENSG00000229833.5274.29380352.97310-0.363801.831001.30680HepG2QKI
PET100ENSG00000229833.5194.88720291.03250-0.578501.910601.31330HepG2RAVER1
PET100ENSG00000229833.5233.03100320.33600-0.459102.317101.69460HepG2RBM25
PET100ENSG00000229833.5238.01820337.78250-0.505003.129002.47910HepG2RECQL
PET100ENSG00000229833.5181.39690285.92110-0.656502.821601.86920HepG2RPS10
PET100ENSG00000229833.5139.96280227.80760-0.702803.428502.75330HepG2RPS19
PET100ENSG00000229833.5228.14680339.31560-0.572703.848503.16920HepG2SF3B4
PET100ENSG00000229833.5340.55350435.83780-0.355902.244201.60110HepG2SLBP
PET100ENSG00000229833.5273.84310153.412000.835803.596502.70150HepG2SNRNP70
PET100ENSG00000229833.5289.51370439.18410-0.601204.683804.08180HepG2SRFBP1
PET100ENSG00000229833.5288.24400448.78380-0.638705.624704.77830HepG2SRSF5
PET100ENSG00000229833.5270.04630362.04280-0.423002.499401.83420HepG2SRSF7
PET100ENSG00000229833.5171.59710288.12290-0.747705.685204.94360HepG2SRSF9
PET100ENSG00000229833.5356.06240510.37600-0.519404.632503.86480HepG2SUCLG1
PET100ENSG00000229833.5238.72160318.31100-0.415102.299501.78050HepG2TAF15
PET100ENSG00000229833.5185.04350292.51060-0.660604.213403.19060HepG2TIA1
PET100ENSG00000229833.5127.65710291.24160-1.189908.282207.19520HepG2U2AF1
PET100ENSG00000229833.5147.32000605.71540-2.039703.289802.21200HepG2U2AF2
PET100ENSG00000229833.5327.68000470.05090-0.520502.282701.52790HepG2UBE2L3
PET100ENSG00000229833.5200.10310272.73720-0.446802.251401.69940HepG2UTP3
PET100ENSG00000229833.5221.04600156.383600.499202.379401.75080HepG2ZC3H8
PET100ENSG00000229833.5185.09220290.80380-0.651803.069801.69700HepG2ZRANB2
PET100ENSG00000229833.5825.41600471.560800.8076010.324609.31870K562AGGF1
PET100ENSG00000229833.5798.41620518.246300.623404.768603.39290K562AKAP8
PET100ENSG00000229833.5914.04850490.698200.8973011.7865010.31220K562AKAP8L
PET100ENSG00000229833.5602.49830798.70050-0.406702.312001.76820K562AQR
PET100ENSG00000229833.5717.48380514.894100.478603.657502.59560K562ATP5C1
PET100ENSG00000229833.5468.61470696.15370-0.571003.391102.68020K562DDX47
PET100ENSG00000229833.5679.94000527.914900.365002.236401.45990K562DKC1
PET100ENSG00000229833.5106.15870214.24890-1.013102.758001.75730K562EIF3A
PET100ENSG00000229833.5187.87480368.48230-0.971803.983302.42540K562EXOSC5
PET100ENSG00000229833.5737.96470474.814100.636102.489901.68670K562FIP1L1
PET100ENSG00000229833.5325.97350480.02250-0.558302.983102.24500K562G3BP2
PET100ENSG00000229833.5374.11900513.69580-0.457403.438102.16770K562GLRX3
PET100ENSG00000229833.5258.27740552.67660-1.0975012.9111011.69820K562HNRNPC
PET100ENSG00000229833.5298.15460493.54850-0.727106.103404.32290K562HNRNPF
PET100ENSG00000229833.5226.64560387.77140-0.774806.483003.64100K562HNRNPH1
PET100ENSG00000229833.5818.77240390.470601.068103.173602.17150K562HNRNPM
PET100ENSG00000229833.5413.09830573.45370-0.473203.975202.89750K562HNRNPU
PET100ENSG00000229833.5793.63940520.691100.608005.326904.10450K562KIF1C
PET100ENSG00000229833.5371.83980535.21860-0.525403.860502.16820K562LARP7
PET100ENSG00000229833.5362.63360560.55590-0.628304.785202.74420K562LIN28B
PET100ENSG00000229833.5357.47820492.83060-0.463203.062001.43290K562LSM11
PET100ENSG00000229833.5830.72160583.314200.510003.253902.25380K562MBNL1
PET100ENSG00000229833.5395.00660600.05410-0.603207.115205.99860K562NSUN2
PET100ENSG00000229833.5366.77700539.58980-0.557004.757902.82150K562PHF6
PET100ENSG00000229833.5490.09500334.238300.552103.527802.68030K562PRPF8
PET100ENSG00000229833.5304.23830495.53460-0.703805.045503.77520K562PSIP1
PET100ENSG00000229833.51155.73870486.510801.2482021.8399020.33870K562PUS1
PET100ENSG00000229833.5790.35780474.136900.737104.465603.73110K562RBM15
PET100ENSG00000229833.5250.37770452.12120-0.852608.073106.38150K562RCC2
PET100ENSG00000229833.5198.39980320.30680-0.691004.255102.90150K562SAFB
PET100ENSG00000229833.5216.60650331.17910-0.612503.407101.78300K562SDAD1
PET100ENSG00000229833.5195.16270428.59780-1.1349010.130607.82730K562SRFBP1
PET100ENSG00000229833.5163.85840251.28060-0.616802.898301.81290K562SRSF4
PET100ENSG00000229833.5252.39230409.24780-0.697306.023903.73150K562SRSF9
PET100ENSG00000229833.5259.85640360.59880-0.472702.781501.95970K562SYNCRIP
PET100ENSG00000229833.5224.12070476.62020-1.0886010.186608.29890K562TIAL1
PET100ENSG00000229833.5272.44140506.35860-0.894208.100206.28110K562TRIM56
PET100ENSG00000229833.5184.63960340.75740-0.884005.354802.85260K562TRNAU1AP
PET100ENSG00000229833.5491.95660636.25280-0.371102.908802.17240K562UPF1
PET100ENSG00000229833.5389.13270544.41690-0.484403.591902.59570K562WDR3
PET100ENSG00000229833.5438.60460566.16140-0.368302.986802.10740K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.





7 RBPs can affect the splicing of PET100 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPET100ENSG00000229833.5chr19+7696117769620776957087695732769635876965100.054000.000070.01357includedK562FMR1
SEPET100ENSG00000229833.5chr19+7696117769620776955097695732769635876965100.106000.000000.00000includedK562AQR
SEPET100ENSG00000229833.5chr19+7696117769620776957087695732769635876965100.100000.000100.05388includedHepG2GRSF1
SEPET100ENSG00000229833.5chr19+769570876957327695458769554576963587696842-0.089000.000000.00000excludedK562U2AF2
SEPET100ENSG00000229833.5chr19+7696117769620776957087695732769635876965100.090000.000000.00000includedK562SF3B1
SEPET100ENSG00000229833.5chr19+7696117769620776955097695732769635876965100.076000.000000.00000includedK562HNRNPC
A5SSPET100ENSG00000229833.5chr19+769550976957327695509769554576963587696510-0.162000.000000.00000shorterK562U2AF2
RIPET100ENSG00000229833.5chr19+7695458769573876954587695545769563976957380.452000.009220.08269includedK562UTP18

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PET100 is not avaliable on ENCORE database.