PET100

General Information

Gene Name : PET100
Gene ID : ENSG00000229833.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PET100)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PET100	ENSG00000229833.9	29.89	58.23	44.06	ENCSR000AEF
HepG2	PET100	ENSG00000229833.9	41.47	34.93	38.20	ENCSR985KAT
K562	PET100	ENSG00000229833.9	57.64	51.90	54.77	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PET100 is not avaliable on ENCORE database.

Proteins bound to RNA

PET100 RNA is bound by 10 proteins.

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eCLIP assay for PET100 is not avaliable on ENCORE database.

10 proteins are bound to PET100 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	7695696	7695788	+	CDS,intron-Proximal	4.50666	12.46803	K562	AQR
chr19	7695475	7695545	+	CDS,intron-Distal	5.54113	8.76030	HepG2	LARP4
chr19	7695519	7695546	+	CDS,intron-Distal,intron-Proximal	5.40076	8.52455	K562	PABPC4
chr19	7695456	7695550	+	CDS,intron-Distal,intron-Proximal	3.10097	8.41726	K562	DDX55
chr19	7694719	7694807	+	CDS,intron-Proximal	3.87384	7.56654	HepG2	PRPF8
chr19	7696359	7696425	+	3'-UTR,CDS,intron-Distal	3.78297	7.16338	HepG2	LARP4
chr19	7695482	7695546	+	CDS,intron-Distal,intron-Proximal	4.22922	6.41658	K562	APOBEC3C
chr19	7695708	7695733	+	CDS,intron-Proximal	4.79199	6.34559	K562	APOBEC3C
chr19	7695473	7695542	+	CDS,intron-Distal	3.31872	6.08510	K562	SND1
chr19	7695708	7695733	+	CDS,intron-Proximal	4.94321	5.94584	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 17 entries

eCLIP assay for PET100 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PET100 is not available on ENCORE database.
84 RBPs can affect the levels of PET100.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.

84 RBPs can affect the gene expression of PET100 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PET100	ENSG00000229833.5	1155.73870	486.51080	1.24820	21.83990	20.33870	K562	PUS1
PET100	ENSG00000229833.5	258.27740	552.67660	-1.09750	12.91110	11.69820	K562	HNRNPC
PET100	ENSG00000229833.5	914.04850	490.69820	0.89730	11.78650	10.31220	K562	AKAP8L
PET100	ENSG00000229833.5	825.41600	471.56080	0.80760	10.32460	9.31870	K562	AGGF1
PET100	ENSG00000229833.5	224.12070	476.62020	-1.08860	10.18660	8.29890	K562	TIAL1
PET100	ENSG00000229833.5	195.16270	428.59780	-1.13490	10.13060	7.82730	K562	SRFBP1
PET100	ENSG00000229833.5	127.65710	291.24160	-1.18990	8.28220	7.19520	HepG2	U2AF1
PET100	ENSG00000229833.5	272.13080	465.20610	-0.77360	7.62920	6.71420	HepG2	ETF1
PET100	ENSG00000229833.5	184.55340	370.33880	-1.00480	7.77590	6.58080	HepG2	PABPC4
PET100	ENSG00000229833.5	250.37770	452.12120	-0.85260	8.07310	6.38150	K562	RCC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 88 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.

7 RBPs can affect the splicing of PET100 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PET100	ENSG00000229833.5	chr19	+	7696117	7696207	7695509	7695732	7696358	7696510	0.10600	0.00000	0.00000	included	K562	AQR
SE	PET100	ENSG00000229833.5	chr19	+	7695708	7695732	7695458	7695545	7696358	7696842	-0.08900	0.00000	0.00000	excluded	K562	U2AF2
SE	PET100	ENSG00000229833.5	chr19	+	7696117	7696207	7695708	7695732	7696358	7696510	0.09000	0.00000	0.00000	included	K562	SF3B1
SE	PET100	ENSG00000229833.5	chr19	+	7696117	7696207	7695509	7695732	7696358	7696510	0.07600	0.00000	0.00000	included	K562	HNRNPC
A5SS	PET100	ENSG00000229833.5	chr19	+	7695509	7695732	7695509	7695545	7696358	7696510	-0.16200	0.00000	0.00000	shorter	K562	U2AF2
SE	PET100	ENSG00000229833.5	chr19	+	7696117	7696207	7695708	7695732	7696358	7696510	0.05400	0.00007	0.01357	included	K562	FMR1
SE	PET100	ENSG00000229833.5	chr19	+	7696117	7696207	7695708	7695732	7696358	7696510	0.10000	0.00010	0.05388	included	HepG2	GRSF1
RI	PET100	ENSG00000229833.5	chr19	+	7695458	7695738	7695458	7695545	7695639	7695738	0.45200	0.00922	0.08269	included	K562	UTP18

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PET100

General Information

Functions

Localization

Domains (AlphaFold: PET100)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PET100 is not avaliable on ENCORE database.

10 proteins are bound to PET100 RNA:

eCLIP assay for PET100 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.

84 RBPs can affect the gene expression of PET100 :

The Knockdown/knockout RNA-Seq assay for PET100 is not available on ENCORE database.

7 RBPs can affect the splicing of PET100 :

The Knockdown/knockout RNA-Seq assay for PET100 is not avaliable on ENCORE database.