AGK

General Information

Gene Name       : AGK
Gene ID             : ENSG00000006530.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AGK)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AGKENSG00000006530.1645.2344.0844.66ENCSR000AEF
HepG2AGKENSG00000006530.1619.2527.3723.31ENCSR985KAT
K562AGKENSG00000006530.1658.6259.8659.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AGK is not avaliable on ENCORE database.



Proteins bound to RNA
  • AGK RNA is bound by 19 proteins.  







eCLIP assay for AGK is not avaliable on ENCORE database.





19 proteins are bound to AGK RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7141296436141296470+3'-UTR,CDS,intron-Proximal5.538677.81430K562AQR
chr7141353416141353485+3'-UTR3.160686.99055K562UPF1
chr7141321531141321596+3'-UTR,CDS,intron-Proximal5.296995.34688K562DDX24
chr7141353368141353413+3'-UTR4.888395.48218K562FAM120A
chr7141353588141353644+3'-UTR3.934185.61622K562UPF1
chr7141353538141353588+3'-UTR3.277283.85107K562UPF1
chr7141341609141341709+3'-UTR,CDS,intron-Proximal3.329024.53005K562YBX3
chr7141293823141293959+3'-UTR,intron-Distal3.931033.24603K562KHSRP
chr7141310993141311089+3'-UTR,CDS,intron-Proximal4.419603.79199HepG2PPIG
chr7141321534141321584+3'-UTR,CDS3.305323.61259K562ZNF622
chr7141353018141353081+3'-UTR3.328155.64486K562IGF2BP2
chr7141353488141353596+3'-UTR4.2984611.91928K562FAM120A
chr7141296434141296570+3'-UTR,CDS,intron-Distal,intron-Proximal3.791917.05055K562PRPF8
chr7141310996141311074+3'-UTR,CDS3.556813.75245K562BUD13
chr7141353294141353368+3'-UTR4.5528315.10596K562FAM120A
chr7141301045141301121+3'-UTR,CDS,intron-Proximal3.230016.40067K562PRPF8
chr7141301061141301120+3'-UTR,CDS,intron-Proximal4.761773.70131HepG2PRPF8
chr7141255275141255377+5'-UTR,CDS,intron-Proximal4.221035.13243HepG2GRWD1
chr7141251231141251280+5'-UTR,intron-Proximal4.853345.17615K562AQR
chr7141255257141255310+5'-UTR,CDS3.995374.26442K562DDX3X
chr7141296146141296293+intron-Distal,intron-Proximal4.464706.13339K562KHSRP
chr7141251304141251377+intron-Distal,intron-Proximal3.447918.82495K562EFTUD2
chr7141302833141302868+intron-Distal3.426747.19702K562KHSRP
chr7141265932141266013+intron-Distal4.254323.55787K562PTBP1
chr7141251258141251378+intron-Distal,intron-Proximal3.420163.50696K562BUD13
chr7141301578141301702+intron-Distal3.232136.23972K562KHSRP
chr7141251280141251359+intron-Distal,intron-Proximal4.123635.63763K562AQR
chr7141301990141302057+intron-Distal4.278413.91772K562TARDBP
chr7141301935141302075+intron-Distal3.982268.30477K562EIF4G2
chr7141251390141251487+intron-Distal3.094193.23164HepG2PRPF4
chr7141301878141301961+intron-Distal3.338923.93348K562TARDBP
chr7141301231141301307+intron-Distal4.323893.77802HepG2U2AF2
chr7141251309141251365+intron-Distal,intron-Proximal4.160703.49003K562PRPF8
chr7141302868141302930+intron-Distal3.390439.66830K562KHSRP
chr7141296470141296483+intron-Proximal4.764279.04436K562AQR
chr7141296483141296524+intron-Proximal3.429353.08090K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AGK is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AGK is not available on ENCORE database.

  • 64 RBPs can affect the levels of AGK.  








The Knockdown/knockout RNA-Seq assay for AGK is not available on ENCORE database.





64 RBPs can affect the gene expression of AGK :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AGKENSG00000006530.111004.93570686.532500.549603.792803.18410HepG2AKAP1
AGKENSG00000006530.11425.56860573.17040-0.429603.711202.83580HepG2AKAP8L
AGKENSG00000006530.11428.49880568.03580-0.406702.193101.48960HepG2ASCC1
AGKENSG00000006530.11372.60810513.41300-0.462502.405901.56980HepG2BCLAF1
AGKENSG00000006530.11360.85650539.67710-0.580703.897302.98920HepG2CIRBP
AGKENSG00000006530.11605.20440776.72100-0.360003.357502.66300HepG2CELF1
AGKENSG00000006530.11322.83180564.97090-0.807406.001905.12070HepG2DDX6
AGKENSG00000006530.11399.48080562.85210-0.494604.305403.44500HepG2DNAJC21
AGKENSG00000006530.11401.95630543.05900-0.434102.433001.87510HepG2EIF2S1
AGKENSG00000006530.11273.33910427.70460-0.645903.943902.87400HepG2EIF3D
AGKENSG00000006530.11607.27890823.95870-0.440205.019103.94770HepG2EIF4G1
AGKENSG00000006530.11516.53390789.32000-0.611705.703904.55630HepG2EIF4G2
AGKENSG00000006530.11657.612701033.18980-0.6518010.407809.36290HepG2ETF1
AGKENSG00000006530.11709.88380557.468300.348602.397301.62120HepG2EWSR1
AGKENSG00000006530.11516.62980671.20590-0.377601.957901.41350HepG2GPKOW
AGKENSG00000006530.11418.77940568.24450-0.440302.873402.21510HepG2HNRNPA1
AGKENSG00000006530.11611.27530825.34720-0.433204.670503.76950HepG2HNRNPF
AGKENSG00000006530.11609.75130760.93120-0.319503.275202.54690HepG2HNRNPL
AGKENSG00000006530.11394.14010640.54440-0.700605.756104.88170HepG2HNRNPLL
AGKENSG00000006530.11573.99090812.73170-0.501804.848103.91530HepG2IGF2BP1
AGKENSG00000006530.11546.11610828.27160-0.600907.493706.25490HepG2NOL12
AGKENSG00000006530.11296.25000567.96670-0.939009.007207.71550HepG2NSUN2
AGKENSG00000006530.11407.24480590.86750-0.536903.303001.38230HepG2PPIG
AGKENSG00000006530.11409.47100560.02880-0.451703.753602.90680HepG2PPIL4
AGKENSG00000006530.11317.55860448.15890-0.497002.542401.76740HepG2PRPF8
AGKENSG00000006530.11615.63090790.62140-0.360902.698502.10900HepG2PUF60
AGKENSG00000006530.11275.23400517.19580-0.910107.190805.49210HepG2RCC2
AGKENSG00000006530.11535.46740683.09720-0.351302.704802.16840HepG2NELFE
AGKENSG00000006530.11432.58880636.23510-0.556605.640104.79930HepG2RECQL
AGKENSG00000006530.11575.69180889.09590-0.627006.531505.54550HepG2RPLP0
AGKENSG00000006530.11431.53410559.16310-0.373803.052702.38220HepG2SAFB2
AGKENSG00000006530.11302.64610634.01100-1.0669012.3146010.92550HepG2SF3B1
AGKENSG00000006530.11796.18430667.016500.255301.853101.44370HepG2SRSF1
AGKENSG00000006530.11614.58670810.87510-0.399903.385702.62650HepG2SRSF7
AGKENSG00000006530.11389.58310542.66300-0.478104.383203.71820HepG2SRSF9
AGKENSG00000006530.11577.76090846.82790-0.551607.487206.72360HepG2SSB
AGKENSG00000006530.11767.51230887.76950-0.210001.897301.36460HepG2SUCLG1
AGKENSG00000006530.11320.06400578.31220-0.853506.473305.50520HepG2SUPV3L1
AGKENSG00000006530.11309.48900610.09840-0.9792013.0729012.12400HepG2TIAL1
AGKENSG00000006530.11464.63090615.56940-0.405803.753403.11870HepG2TRIM56
AGKENSG00000006530.11253.75500341.63040-0.429001.956301.31820HepG2UCHL5
AGKENSG00000006530.11410.99620599.18740-0.543905.795204.84350HepG2UPF1
AGKENSG00000006530.11717.29480578.493800.310202.164401.62100HepG2UTP3
AGKENSG00000006530.11384.90190569.28470-0.564703.487102.67870HepG2XRN2
AGKENSG00000006530.112601.171701963.807100.405407.428006.56310K562AGGF1
AGKENSG00000006530.112058.620102642.70150-0.360303.896402.38770K562APOBEC3C
AGKENSG00000006530.111199.926202250.76210-0.9075015.7483014.50340K562AQR
AGKENSG00000006530.111226.039201545.81670-0.334404.413403.18360K562BCLAF1
AGKENSG00000006530.111185.305101674.75740-0.498704.863503.69320K562BOP1
AGKENSG00000006530.111205.551801587.51480-0.397103.555502.09190K562CIRBP
AGKENSG00000006530.111319.394501780.69860-0.432604.955303.91190K562CPSF6
AGKENSG00000006530.112603.005203682.43250-0.500508.526206.85350K562CELF1
AGKENSG00000006530.112605.334802198.991600.244502.631701.78160K562DKC1
AGKENSG00000006530.11766.08260993.77220-0.375402.702001.37620K562DNAJC21
AGKENSG00000006530.11889.186701318.61370-0.568505.602604.27720K562EFTUD2
AGKENSG00000006530.111444.422601846.33210-0.354204.692903.78730K562EIF2S2
AGKENSG00000006530.11851.308401411.89430-0.729907.084405.31360K562EIF3D
AGKENSG00000006530.112566.105602994.95060-0.223002.629901.71170K562EIF4G2
AGKENSG00000006530.111463.425001811.91350-0.308202.324901.53890K562FMR1
AGKENSG00000006530.111128.456501535.80130-0.444603.672002.60550K562FTO
AGKENSG00000006530.111158.249801700.08970-0.553706.698305.46590K562GPKOW
AGKENSG00000006530.111231.234901530.41140-0.313802.640802.05540K562HNRNPC
AGKENSG00000006530.111510.084301894.90340-0.327503.793102.74470K562HNRNPU
AGKENSG00000006530.111110.894801659.49380-0.579007.420005.95320K562METAP2
AGKENSG00000006530.111426.549101863.66420-0.385607.803806.63780K562NSUN2
AGKENSG00000006530.111087.823101385.13640-0.348602.839301.84830K562PCBP2
AGKENSG00000006530.111033.911801283.16150-0.311601.995001.35170K562PRPF8
AGKENSG00000006530.112590.525603267.72800-0.335003.403102.49740K562PUF60
AGKENSG00000006530.112624.837502026.657800.373003.367802.77740K562PUS1
AGKENSG00000006530.111161.267701450.40710-0.320802.457401.66840K562RBM22
AGKENSG00000006530.11841.866801252.09330-0.572707.188305.58370K562RCC2
AGKENSG00000006530.111100.731501616.98850-0.554804.812903.50460K562SF3B1
AGKENSG00000006530.111186.574401444.19270-0.283502.464001.65920K562SF3B4
AGKENSG00000006530.111784.182101482.610200.267002.233901.59030K562SRSF1
AGKENSG00000006530.11956.440101242.45340-0.377402.386801.44700K562SUPV3L1
AGKENSG00000006530.111817.389301535.975700.242602.087801.37390K562SYNCRIP
AGKENSG00000006530.111148.600501500.58710-0.385703.126902.37470K562TARDBP
AGKENSG00000006530.111210.203801447.46240-0.258302.031001.33660K562TIA1
AGKENSG00000006530.11817.320201319.81270-0.691407.372705.79030K562TIAL1
AGKENSG00000006530.11981.066301314.94600-0.422603.280502.16820K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AGK is not available on ENCORE database.





1 RBPs can affect the splicing of AGK :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEAGKENSG00000006530.11chr7+1412552521412553671412929451412929851412509881412512341412963611412964410.297000.000850.024761includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AGK is not avaliable on ENCORE database.