UPP2

General Information

Gene Name       : UPP2
Gene ID             : ENSG00000007001.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UPP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UPP2ENSG00000007001.120.000.000.00ENCSR000AEF
HepG2UPP2ENSG00000007001.120.020.080.05ENCSR985KAT
K562UPP2ENSG00000007001.120.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UPP2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on UPP2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for UPP2 is not avaliable on ENCORE database.






NO known proteins are bound to UPP2 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for UPP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UPP2 is not available on ENCORE database.

  • 37 RBPs can affect the levels of UPP2.  








The Knockdown/knockout RNA-Seq assay for UPP2 is not available on ENCORE database.





37 RBPs can affect the gene expression of UPP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UPP2ENSG00000007001.843.080200.433706.634109.609708.06380HepG2BCLAF1
UPP2ENSG00000007001.836.080105.311002.764004.967503.94740HepG2CIRBP
UPP2ENSG00000007001.811.468601.632502.812401.941501.37120HepG2CKAP4
UPP2ENSG00000007001.8120.760506.474404.2212014.3981013.08460HepG2DDX3X
UPP2ENSG00000007001.830.593103.381203.177505.342303.98220HepG2DDX5
UPP2ENSG00000007001.826.107801.563404.061605.517804.62050HepG2DKC1
UPP2ENSG00000007001.89.532500.0000099999.999903.028702.29820HepG2DNAJC21
UPP2ENSG00000007001.818.787202.770702.761302.651301.82880HepG2EIF4G1
UPP2ENSG00000007001.861.406101.296805.565207.857906.15390HepG2FTO
UPP2ENSG00000007001.817.581401.468703.581403.196902.51350HepG2GPKOW
UPP2ENSG00000007001.811.966101.886002.665402.189901.54640HepG2HNRNPF
UPP2ENSG00000007001.875.564001.401505.7525018.5267017.11150HepG2HNRNPLL
UPP2ENSG00000007001.816.571500.0000099999.999905.242904.42940HepG2HNRNPU
UPP2ENSG00000007001.820.201901.857403.443104.456503.55590HepG2IGF2BP1
UPP2ENSG00000007001.821.187105.622801.913702.030001.44240HepG2IGF2BP2
UPP2ENSG00000007001.823.040305.954801.951902.229901.63900HepG2MAGOH
UPP2ENSG00000007001.815.502101.428103.440202.494301.57790HepG2MTPAP
UPP2ENSG00000007001.816.125802.282802.820402.566501.97630HepG2PCBP1
UPP2ENSG00000007001.813.573101.030003.719902.183501.48900HepG2PRPF4
UPP2ENSG00000007001.827.659300.377406.195606.300205.13390HepG2PRPF8
UPP2ENSG00000007001.855.124902.321504.5694010.423209.49230HepG2PTBP1
UPP2ENSG00000007001.890.341602.661305.0851022.1845020.71330HepG2PUF60
UPP2ENSG00000007001.884.893801.664605.6723022.8015021.35020HepG2PUS1
UPP2ENSG00000007001.8115.329502.517105.5177026.5051024.86230HepG2QKI
UPP2ENSG00000007001.825.429102.029403.647305.193604.29610HepG2RPLP0
UPP2ENSG00000007001.814.532502.247202.693002.266201.40950HepG2RPS10
UPP2ENSG00000007001.814.416600.373105.272102.954302.14480HepG2RRP9
UPP2ENSG00000007001.88.001600.0000099999.999902.520801.90110HepG2SAFB2
UPP2ENSG00000007001.836.466501.387604.715805.946104.94430HepG2SF3B1
UPP2ENSG00000007001.815.845102.419402.711202.152001.62060HepG2SF3B4
UPP2ENSG00000007001.815.735201.543803.349302.522001.77750HepG2SNRNP70
UPP2ENSG00000007001.823.552301.852403.668305.568704.63790HepG2SRSF7
UPP2ENSG00000007001.852.313106.055403.110808.842808.02650HepG2SSB
UPP2ENSG00000007001.813.933901.125803.629502.431201.42780HepG2TBRG4
UPP2ENSG00000007001.817.216100.0000099999.999905.366404.71650HepG2TIAL1
UPP2ENSG00000007001.824.644401.823403.756504.034703.28200HepG2U2AF1
UPP2ENSG00000007001.840.073106.963002.524805.768204.81770HepG2UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UPP2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of UPP2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for UPP2 is not avaliable on ENCORE database.