KDM1A

General Information

Gene Name       : KDM1A
Gene ID             : ENSG00000004487.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KDM1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KDM1AENSG00000004487.1671.0270.1870.60ENCSR000AEF
HepG2KDM1AENSG00000004487.1694.09103.3598.72ENCSR985KAT
K562KDM1AENSG00000004487.16103.48113.08108.28ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KDM1A is not avaliable on ENCORE database.



Proteins bound to RNA
  • KDM1A RNA is bound by 48 proteins.  







eCLIP assay for KDM1A is not avaliable on ENCORE database.





48 proteins are bound to KDM1A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12340989523409974+3'-UTR4.6856410.86155HepG2SUB1
chr12340991123409978+3'-UTR3.738918.22414K562PABPC4
chr12340986523409910+3'-UTR4.265725.19234K562LIN28B
chr12341005323410126+3'-UTR4.720786.81704K562NOLC1
chr12340987223409921+3'-UTR4.929474.03560HepG2DDX55
chr12340986723409911+3'-UTR3.358253.60832K562PABPC4
chr12340990823409979+3'-UTR3.754706.46429K562NOLC1
chr12341004723410141+3'-UTR6.3519340.06790HepG2SUB1
chr12334601723346075+5'-UTR3.550029.03323K562RBM15
chr12334604323346072+5'-UTR3.679357.25346K562UCHL5
chr12334597823346017+5'-UTR3.579874.51666K562RBM15
chr12338251223382532+CDS,intron-Proximal3.143347.20615HepG2BCLAF1
chr12338153223381587+CDS,intron-Proximal3.857208.69282K562GPKOW
chr12339507823395133+CDS3.007524.79429HepG2GRWD1
chr12335699123357020+CDS3.545145.76104HepG2BCLAF1
chr12340608923406144+CDS4.170477.23258K562RPS3
chr12340800423408066+CDS3.9130811.76553K562FMR1
chr12338397623384016+CDS,intron-Proximal4.372799.72888HepG2GRWD1
chr12338025423380275+CDS3.049053.21309HepG2GRWD1
chr12340979423409833+CDS3.247313.63681K562RBM15
chr12339551123395637+CDS,intron-Proximal3.026796.78476HepG2AQR
chr12334627723346365+CDS3.609217.86922HepG2RPS3
chr12340801323408067+CDS,intron-Proximal3.096694.96885HepG2G3BP1
chr12337094523370978+CDS,intron-Distal3.042707.32462K562PUM1
chr12334614523346239+CDS3.504516.73521K562DDX3X
chr12334616923346280+CDS3.6016310.90153HepG2GRWD1
chr12338403323384095+CDS,intron-Proximal5.6490710.09745HepG2PRPF8
chr12339555323395592+CDS,intron-Proximal3.8361013.38158K562IGF2BP1
chr12338404723384059+CDS,intron-Proximal3.837923.53569K562LIN28B
chr12337700123377089+CDS,intron-Proximal3.822509.75237K562TIA1
chr12340978823409847+CDS3.129824.18258K562PABPC4
chr12340606823406136+CDS5.545697.71888HepG2SUB1
chr12340969523409750+CDS3.235824.96088HepG2GRWD1
chr12339862223398640+CDS3.184109.50920K562UCHL5
chr12338156123381592+CDS,intron-Proximal3.262958.03889K562YBX3
chr12334639023346443+CDS,intron-Proximal3.596316.38492K562FMR1
chr12340370423403740+CDS,intron-Proximal3.097003.97075K562NCBP2
chr12339508423395095+CDS3.7247515.69810K562YBX3
chr12338562223385661+CDS,intron-Proximal3.5774815.91747K562ZNF622
chr12340875823408783+CDS3.170633.50786HepG2G3BP1
chr12340555223405664+CDS3.577363.01092HepG2LIN28B
chr12339864023398691+CDS,intron-Proximal3.0751219.70430K562UCHL5
chr12339506523395083+CDS3.7428414.09034K562YBX3
chr12339864823398690+CDS3.2961818.29891K562ZNF622
chr12338556523385598+CDS,intron-Proximal3.586515.81849K562GRWD1
chr12334632823346390+CDS4.6552216.66678K562FMR1
chr12340803823408063+CDS5.322827.95223HepG2BCLAF1
chr12338153423381597+CDS,intron-Proximal3.119164.14951K562AQR
chr12334628023346328+CDS4.833087.92891HepG2GRWD1
chr12339862023398690+CDS3.655649.35921HepG2GRWD1
chr12339978423399792+CDS,intron-Proximal3.264886.35635K562UCHL5
chr12340965623409709+CDS,intron-Proximal3.777346.16549HepG2U2AF2
chr12339779223397852+CDS3.6826214.98443HepG2BCLAF1
chr12338397623384026+CDS,intron-Proximal3.4652310.12719K562GRWD1
chr12338157223381646+CDS4.741025.03175K562IGF2BP1
chr12340375423403798+CDS3.240796.48534K562FXR2
chr12338556523385600+CDS,intron-Proximal4.728309.74753HepG2BCLAF1
chr12334626823346384+CDS3.4463316.33152K562FXR2
chr12339516623395175+CDS,intron-Proximal4.2832614.16702K562IGF2BP1
chr12335708323357127+CDS3.7234612.17342K562ZNF800
chr12334619423346307+CDS4.104694.66169HepG2UCHL5
chr12337689023376943+CDS3.557349.22810K562PUM1
chr12340552423405609+CDS3.3555811.11962K562FMR1
chr12337699423377048+CDS,intron-Proximal3.363616.13554K562EFTUD2
chr12339513323395176+CDS,intron-Proximal3.096383.02556K562IGF2BP2
chr12340548423405521+CDS3.912143.25521K562LIN28B
chr12338397623384028+CDS,intron-Proximal3.818313.73303HepG2UCHL5
chr12339508223395166+CDS4.3364318.55843K562IGF2BP1
chr12337687823376890+CDS,intron-Proximal3.470638.15949K562PUM1
chr12338401823384057+CDS4.0843512.07231HepG2BCLAF1
chr12337687923376903+CDS,intron-Proximal3.612508.31280HepG2GRWD1
chr12340371823403754+CDS,intron-Proximal3.372207.76554K562BUD13
chr12337687623376929+CDS,intron-Proximal4.0090511.44223K562ZNF800
chr12340542023405491+CDS,intron-Proximal4.537808.75853K562SF3B4
chr12338556223385603+CDS,intron-Proximal5.3391011.96654K562LIN28B
chr12339862423398690+CDS3.592169.34811K562GRWD1
chr12335708023357129+CDS,intron-Proximal3.3635112.08600K562UCHL5
chr12339559023395647+CDS,intron-Proximal3.7748612.00653HepG2BCLAF1
chr12340382423403888+CDS,intron-Proximal4.105588.17589HepG2PRPF8
chr12334626423346325+CDS3.6221710.83708K562FMR1
chr12340965823409693+CDS,intron-Proximal3.649866.06472K562AQR
chr12338030223380360+CDS,intron-Proximal4.972745.68502HepG2PRPF8
chr12337087023370973+CDS,intron-Distal,intron-Proximal3.7209621.07709K562SF3B4
chr12340882123408907+CDS,intron-Proximal3.8636511.26073HepG2PRPF8
chr12339978423399821+CDS,intron-Proximal3.145966.39923HepG2BCLAF1
chr12338245523382498+CDS3.015704.55847HepG2G3BP1
chr12338397223384016+CDS,intron-Proximal3.037543.51295K562SRSF1
chr12338249923382531+CDS3.097816.21281HepG2GRWD1
chr12340372523403754+CDS3.568986.60490HepG2BCLAF1
chr12340799923408066+CDS4.474554.30948K562LIN28B
chr12334615923346255+CDS3.2391212.85285K562PUM1
chr12340553523405606+CDS3.419675.88509K562FXR2
chr12340871223408798+CDS,intron-Proximal4.0806211.48993K562FMR1
chr12339559923395649+CDS,intron-Proximal3.385516.68812HepG2BUD13
chr12337699623377010+CDS3.033938.73187K562ZNF622
chr12340969123409758+CDS3.093876.21565K562FXR2
chr12338397623384000+CDS,intron-Proximal4.497923.33639K562METAP2
chr12339506923395135+CDS3.6608310.38320HepG2BCLAF1
chr12339555423395648+CDS,intron-Proximal3.1180321.63920K562UCHL5
chr12339861623398627+CDS,intron-Proximal3.0978110.27886K562ZNF622
chr12339772023397772+CDS4.1878410.05563HepG2BCLAF1
chr12334618423346327+CDS3.2335310.07327HepG2ZNF800
chr12337091823370980+CDS,intron-Distal,intron-Proximal3.3346511.99038K562ZNF800
chr12338154723381602+CDS,intron-Proximal3.972107.36631K562U2AF1
chr12339555223395633+CDS,intron-Proximal4.0531524.21385K562ZNF622
chr12339778423397852+CDS3.7634711.31198HepG2GRWD1
chr12338401623384064+CDS,intron-Proximal3.081113.27172K562SRSF1
chr12339861723398693+CDS,intron-Proximal4.3691325.10440HepG2BCLAF1
chr12334617723346274+CDS3.454838.72457K562RBM15
chr12340979623409846+CDS3.545154.72530HepG2G3BP1
chr12340372823403802+CDS3.746623.36587K562FXR1
chr12334635123346391+CDS4.065705.39661K562GEMIN5
chr12338397523384018+CDS,intron-Proximal3.2878612.53083HepG2BCLAF1
chr12334625523346317+CDS3.7496916.60185K562PUM1
chr12338028323380398+CDS,intron-Proximal3.053677.56746K562EFTUD2
chr12337094923370977+CDS,intron-Distal4.680156.73025HepG2GRWD1
chr12339861623398622+CDS,intron-Proximal3.224426.35635K562UCHL5
chr12335698423357128+CDS,intron-Proximal3.649877.45446HepG2G3BP1
chr12339555423395642+CDS3.283213.92763K562TRA2A
chr12340978823409845+CDS3.692765.18092K562DDX6
chr12339564223395693+CDS,intron-Proximal3.0082210.58970K562AQR
chr12339991023400011+intron-Distal,intron-Proximal3.679737.20875K562KHSRP
chr12338973123389781+intron-Distal4.783296.41216K562EXOSC5
chr12335973423359755+intron-Distal4.779346.97375HepG2ILF3
chr12339228123392428+intron-Distal3.495158.96960K562PTBP1
chr12338983623389900+intron-Distal3.182097.52396K562TARDBP
chr12340676923406882+intron-Distal4.698615.90588K562MATR3
chr12340706623407150+intron-Distal4.635775.26569K562MATR3
chr12337524323375346+intron-Distal3.745033.94088HepG2QKI
chr12337704823377138+intron-Distal,intron-Proximal3.465856.58183K562EFTUD2
chr12335856223358617+intron-Distal5.0388011.56570HepG2PTBP1
chr12339571323395768+intron-Distal,intron-Proximal3.734653.47285K562PRPF8
chr12339465923394744+intron-Distal3.097584.40773HepG2SUGP2
chr12337881323378888+intron-Distal4.361904.32964K562HNRNPM
chr12337880523378883+intron-Distal3.8711810.49455HepG2SUGP2
chr12337888323378923+intron-Distal3.749705.54651HepG2SUGP2
chr12340356323403682+intron-Distal,intron-Proximal4.427825.34107HepG2KHSRP
chr12337932723379438+intron-Distal3.754158.38505K562MATR3
chr12340909223409147+intron-Distal4.186496.32636HepG2U2AF2
chr12337811523378161+intron-Distal4.034506.25619HepG2SUGP2
chr12335595723356040+intron-Distal3.978703.71677HepG2HNRNPL
chr12340688223406984+intron-Distal3.395605.96782K562MATR3
chr12337924623379290+intron-Distal3.813226.02877HepG2SUGP2
chr12337979123379825+intron-Distal3.325703.10640HepG2SUGP2
chr12340391423403973+intron-Distal,intron-Proximal3.578625.17284K562TIA1
chr12338380723383865+intron-Distal3.882233.58455K562U2AF2
chr12337236123372495+intron-Distal3.588734.35402HepG2SUGP2
chr12338972623389795+intron-Distal4.670443.94682K562EIF4G2
chr12337971823379753+intron-Distal3.499734.81844HepG2SUGP2
chr12335848923358635+intron-Distal5.6322127.21039K562PTBP1
chr12337945823379539+intron-Distal4.961397.29443K562MATR3
chr12337915423379198+intron-Distal3.889756.25619HepG2SUGP2
chr12339295023393010+intron-Distal4.394454.53347HepG2SUGP2
chr12338376923383821+intron-Distal3.601235.29732HepG2KHSRP
chr12335975523359785+intron-Distal4.888707.61274HepG2ILF3
chr12337798823378046+intron-Distal3.420213.35050HepG2SUGP2
chr12335846223358615+intron-Distal3.6795410.31798K562MATR3
chr12338043723380499+intron-Distal3.625065.57010K562KHSRP
chr12339878123398837+intron-Distal,intron-Proximal3.422794.76345K562KHSRP
chr12337638923376482+intron-Distal3.299515.46575K562KHSRP
chr12340139123401432+intron-Distal3.765045.32884K562KHSRP
chr12340894023409016+intron-Distal,intron-Proximal3.364566.57527HepG2U2AF2
chr12339392023393990+intron-Distal3.540653.84025HepG2SUGP2
chr12338972623389791+intron-Distal5.201858.34301K562TARDBP
chr12339570823395769+intron-Distal,intron-Proximal3.085924.63112K562AQR
chr12337525123375396+intron-Distal6.0916620.97003K562QKI
chr12337764823377716+intron-Distal4.704524.24113K562MATR3
chr12337947923379548+intron-Distal3.761068.74865HepG2SUGP2
chr12337864923378699+intron-Distal3.747706.13570K562HNRNPM
chr12340894923408994+intron-Distal,intron-Proximal4.108294.70109K562U2AF2
chr12339883723398923+intron-Distal3.903819.53244K562KHSRP
chr12339229623392408+intron-Distal3.481714.51915K562MATR3
chr12340390423403983+intron-Distal,intron-Proximal5.517019.56369K562RBM22
chr12335848023358562+intron-Distal4.3974011.31780HepG2PTBP1
chr12337864723378673+intron-Distal5.106378.60156HepG2HNRNPM
chr12336534323365460+intron-Distal5.030636.62827HepG2SUGP2
chr12339228023392434+intron-Distal5.133077.45191HepG2PTBP1
chr12339434623394407+intron-Distal4.299464.61447HepG2SUGP2
chr12340895423408988+intron-Distal,intron-Proximal3.647134.83721K562EFTUD2
chr12335968823359778+intron-Distal4.718605.08856K562ILF3
chr12338382123383868+intron-Distal4.457275.37430HepG2KHSRP
chr12340894223408988+intron-Distal,intron-Proximal4.582407.50107K562AQR
chr12338385323383882+intron-Distal,intron-Proximal3.7747711.65049K562KHSRP
chr12336574123365798+intron-Distal4.486665.04879HepG2SUGP2
chr12338371523383767+intron-Distal3.191835.12205K562KHSRP
chr12338382123383853+intron-Distal4.0368816.99029K562KHSRP
chr12339547623395531+intron-Proximal3.391923.48890K562KHSRP
chr12339566023395683+intron-Proximal4.015953.02181K562PRPF8
chr12340887723408909+intron-Proximal4.384434.21433K562PRPF8
chr12338034223380374+intron-Proximal4.219398.29266K562AQR
chr12338033323380342+intron-Proximal3.515765.75231K562AQR
chr12338033223380372+intron-Proximal4.180395.63851K562SF3B4
chr12338392023383964+intron-Proximal3.451965.82046K562SF3B4
chr12338570323385748+intron-Proximal3.465853.17610K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KDM1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KDM1A is not available on ENCORE database.

  • 115 RBPs can affect the levels of KDM1A.  








The Knockdown/knockout RNA-Seq assay for KDM1A is not available on ENCORE database.





115 RBPs can affect the gene expression of KDM1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KDM1AENSG00000004487.112044.292502636.59980-0.367102.535701.53770HepG2AKAP8
KDM1AENSG00000004487.112399.309003386.04350-0.497005.060104.01290HepG2ASCC1
KDM1AENSG00000004487.112766.786103423.88030-0.307402.760601.35860HepG2ATP5C1
KDM1AENSG00000004487.113742.173404999.27610-0.417809.339608.20180HepG2AUH
KDM1AENSG00000004487.111514.255402501.32740-0.724108.652807.17630HepG2BCLAF1
KDM1AENSG00000004487.111533.204502803.74080-0.8708016.5536015.26770HepG2BOP1
KDM1AENSG00000004487.112979.806003481.12810-0.224302.131601.44860HepG2CALR
KDM1AENSG00000004487.113897.173305046.34070-0.372802.405901.50410HepG2CCAR1
KDM1AENSG00000004487.112464.943203053.73220-0.309006.261405.33370HepG2CKAP4
KDM1AENSG00000004487.112230.417403124.43430-0.486306.378804.75760HepG2CPSF7
KDM1AENSG00000004487.112469.820002954.01040-0.258303.022201.95540HepG2YBX3
KDM1AENSG00000004487.113349.312504677.74520-0.4819010.908409.79810HepG2CELF1
KDM1AENSG00000004487.114089.034005029.56040-0.298706.883505.79200HepG2DAZAP1
KDM1AENSG00000004487.111792.449702946.56410-0.717107.773806.69460HepG2DDX21
KDM1AENSG00000004487.112758.983603920.11590-0.506805.166704.33540HepG2DDX3X
KDM1AENSG00000004487.112175.422002830.30550-0.379702.651401.89150HepG2DDX55
KDM1AENSG00000004487.111920.132103367.50230-0.8105010.222209.11630HepG2DDX6
KDM1AENSG00000004487.112030.577302797.65540-0.462305.541404.18260HepG2DHX30
KDM1AENSG00000004487.112570.072702922.24270-0.185301.991101.40240HepG2DKC1
KDM1AENSG00000004487.112061.484502900.63690-0.492709.584708.34020HepG2DNAJC21
KDM1AENSG00000004487.112051.922402874.99420-0.4866013.9413012.59480HepG2DNAJC2
KDM1AENSG00000004487.112051.894602712.11080-0.402502.682001.59470HepG2AGO1
KDM1AENSG00000004487.111861.163803237.22030-0.7986011.5271010.36780HepG2EIF2S1
KDM1AENSG00000004487.111949.504703577.48900-0.8758011.8522010.55810HepG2EIF4A3
KDM1AENSG00000004487.114119.001904962.11150-0.268704.363703.35590HepG2EIF4G1
KDM1AENSG00000004487.113477.049204753.35990-0.451105.169304.07650HepG2EIF4G2
KDM1AENSG00000004487.113499.537905739.93600-0.7139027.3948025.83270HepG2ETF1
KDM1AENSG00000004487.111727.236502195.40900-0.346003.881302.47030HepG2FAM120A
KDM1AENSG00000004487.112696.277403611.69370-0.421702.569601.49300HepG2FUS
KDM1AENSG00000004487.112142.951603348.39860-0.643907.264506.21120HepG2G3BP1
KDM1AENSG00000004487.112007.563502867.76370-0.514504.994103.61880HepG2GNB2L1
KDM1AENSG00000004487.111973.949402917.69820-0.563705.734404.83570HepG2GPKOW
KDM1AENSG00000004487.112462.685002916.08050-0.243803.290102.23070HepG2HDGF
KDM1AENSG00000004487.111385.601501904.90060-0.459202.845101.45190HepG2HNRNPA0
KDM1AENSG00000004487.112020.901202928.42550-0.535107.569306.57890HepG2HNRNPA1
KDM1AENSG00000004487.113528.783004622.38930-0.389507.904206.47080HepG2HNRNPA2B1
KDM1AENSG00000004487.112298.644503257.32230-0.502906.588805.55610HepG2HNRNPC
KDM1AENSG00000004487.112644.961403729.37480-0.4957012.0264010.67390HepG2HNRNPF
KDM1AENSG00000004487.112792.460604581.49470-0.7143034.8681032.80000HepG2HNRNPL
KDM1AENSG00000004487.111707.756202784.42060-0.705309.821408.71810HepG2HNRNPLL
KDM1AENSG00000004487.112204.043402643.16680-0.262102.145501.30770HepG2HNRNPM
KDM1AENSG00000004487.112275.481003235.78750-0.5079012.8186011.59140HepG2HNRNPU
KDM1AENSG00000004487.112562.753803672.36950-0.519008.810507.58940HepG2IGF2BP1
KDM1AENSG00000004487.112318.523603403.56270-0.553806.115205.14860HepG2IGF2BP2
KDM1AENSG00000004487.112885.727103305.25150-0.195803.056602.28880HepG2ILF2
KDM1AENSG00000004487.112460.758802792.10660-0.182302.498401.52790HepG2KIF1C
KDM1AENSG00000004487.113511.956705328.01820-0.601305.580304.38680HepG2LARP4
KDM1AENSG00000004487.112708.031903610.85740-0.415103.632702.88120HepG2MAGOH
KDM1AENSG00000004487.112708.259403631.05710-0.423003.378002.68730HepG2MATR3
KDM1AENSG00000004487.111889.672603100.61200-0.7144013.0375011.41920HepG2MSI2
KDM1AENSG00000004487.111957.914602839.92710-0.536503.469702.37720HepG2MTPAP
KDM1AENSG00000004487.112564.939703716.58080-0.535105.387904.51790HepG2NCBP2
KDM1AENSG00000004487.113261.461704987.31050-0.6127014.0702012.41200HepG2NOL12
KDM1AENSG00000004487.111320.249702058.93830-0.641103.807002.75170HepG2PABPC1
KDM1AENSG00000004487.112107.778603309.82090-0.651007.776006.58080HepG2PABPC4
KDM1AENSG00000004487.112496.283203419.03900-0.453802.723501.69180HepG2PCBP2
KDM1AENSG00000004487.112754.290003149.56440-0.193502.238901.53600HepG2PRPF4
KDM1AENSG00000004487.111767.571702183.37720-0.304802.012901.32050HepG2PRPF8
KDM1AENSG00000004487.112443.171904760.86970-0.9625024.5715023.03620HepG2PUF60
KDM1AENSG00000004487.113555.514805053.92650-0.5073019.4684018.18280HepG2PUM1
KDM1AENSG00000004487.114079.167205050.20190-0.308103.831203.04560HepG2PUM2
KDM1AENSG00000004487.112652.520903111.11730-0.230103.462302.79110HepG2PUS1
KDM1AENSG00000004487.113152.364803974.39260-0.334304.126903.10460HepG2RBM15
KDM1AENSG00000004487.112678.127403387.84220-0.339103.723902.94910HepG2RBM25
KDM1AENSG00000004487.111985.434704017.44990-1.0168024.4823022.87620HepG2RPLP0
KDM1AENSG00000004487.111818.231202390.23830-0.394604.346003.59250HepG2RPS19
KDM1AENSG00000004487.111856.941802399.02210-0.369502.978102.00050HepG2SERBP1
KDM1AENSG00000004487.112870.660103828.14860-0.415302.400601.77350HepG2SF3A3
KDM1AENSG00000004487.112147.874802755.97880-0.359703.367902.59700HepG2SF3B1
KDM1AENSG00000004487.112845.046703588.46280-0.334906.016405.20130HepG2SF3B4
KDM1AENSG00000004487.113475.283304565.04080-0.3935011.052809.80580HepG2SLBP
KDM1AENSG00000004487.112999.359403360.46260-0.164002.417701.81090HepG2SMN1
KDM1AENSG00000004487.112601.334103363.64970-0.370802.170001.33280HepG2SMNDC1
KDM1AENSG00000004487.111807.434303470.65660-0.941303.256001.81120HepG2SNRNP200
KDM1AENSG00000004487.114873.550303745.614200.379709.170008.42120HepG2SRSF1
KDM1AENSG00000004487.113274.982904700.72890-0.5214014.6401013.36220HepG2SRSF5
KDM1AENSG00000004487.112448.863703663.98740-0.5813016.3882014.93820HepG2SRSF7
KDM1AENSG00000004487.112429.835003047.28770-0.326706.018805.26110HepG2SRSF9
KDM1AENSG00000004487.114014.435004704.53670-0.228903.692403.11920HepG2SSB
KDM1AENSG00000004487.112062.360103083.49940-0.580303.940502.49330HepG2SUB1
KDM1AENSG00000004487.113726.911905345.96940-0.5205018.8591017.46930HepG2SUCLG1
KDM1AENSG00000004487.111681.901802817.53280-0.744309.035307.92820HepG2SUPV3L1
KDM1AENSG00000004487.111979.516502714.16630-0.455404.954004.02440HepG2TARDBP
KDM1AENSG00000004487.111578.698103144.20830-0.9940029.1698027.86240HepG2TIAL1
KDM1AENSG00000004487.111916.806303172.27650-0.7268024.3986022.92920HepG2TRIM56
KDM1AENSG00000004487.113696.123104651.25470-0.331603.830402.78520HepG2TUFM
KDM1AENSG00000004487.112720.927903277.00160-0.268301.875101.34720HepG2U2AF1
KDM1AENSG00000004487.111892.437704040.17600-1.094203.818402.64790HepG2U2AF2
KDM1AENSG00000004487.113558.333304923.33680-0.468404.436803.35910HepG2UBE2L3
KDM1AENSG00000004487.111176.038001664.40830-0.501104.574303.59500HepG2UCHL5
KDM1AENSG00000004487.112487.905503394.98610-0.4485011.187109.95460HepG2UPF1
KDM1AENSG00000004487.112622.692803108.28710-0.245104.208703.40720HepG2ZC3H8
KDM1AENSG00000004487.111967.643003733.82980-0.9242053.1509051.53830HepG2ZNF622
KDM1AENSG00000004487.119116.223206595.089700.4669015.0452013.83170K562AGGF1
KDM1AENSG00000004487.118833.808807247.332200.285502.925801.90670K562AKAP8
KDM1AENSG00000004487.119319.095506862.569900.441306.171505.16940K562AKAP8L
KDM1AENSG00000004487.116435.036008033.84010-0.320103.134902.51750K562AQR
KDM1AENSG00000004487.119103.038507200.639100.338106.051004.63420K562ATP5C1
KDM1AENSG00000004487.114449.705905029.85010-0.176802.309301.43360K562BCLAF1
KDM1AENSG00000004487.116979.206508232.72780-0.238303.790303.04480K562DDX47
KDM1AENSG00000004487.118743.263107384.114600.243603.410602.42430K562DKC1
KDM1AENSG00000004487.113699.493404626.99630-0.322702.774701.86080K562EFTUD2
KDM1AENSG00000004487.114511.359706373.72490-0.4986012.1343010.78190K562EIF2S2
KDM1AENSG00000004487.111857.089702773.04520-0.578403.607002.44300K562EIF3A
KDM1AENSG00000004487.114149.727405243.54490-0.337503.395702.49010K562EIF4A3
KDM1AENSG00000004487.114840.432205453.08130-0.171901.818601.30750K562FXR1
KDM1AENSG00000004487.113611.710104394.37730-0.283002.665301.88450K562GPKOW
KDM1AENSG00000004487.116327.675108493.59390-0.424706.321805.17240K562GRSF1
KDM1AENSG00000004487.113334.233705530.11200-0.7300016.0867014.72520K562HNRNPC
KDM1AENSG00000004487.115961.550007670.83050-0.363703.764802.84140K562HSPD1
KDM1AENSG00000004487.1110273.227107282.621200.496307.134305.66120K562KIF1C
KDM1AENSG00000004487.118412.407206971.488100.271002.673801.62090K562MAK16
KDM1AENSG00000004487.114951.447506199.23630-0.324203.761902.67280K562MATR3
KDM1AENSG00000004487.1110620.338608158.414400.380405.482104.11210K562MBNL1
KDM1AENSG00000004487.115293.926306284.86890-0.247504.630903.60620K562MTPAP
KDM1AENSG00000004487.118719.450705718.482300.608505.709504.28060K562NAA15
KDM1AENSG00000004487.114641.440705527.02080-0.251902.238301.36320K562PCBP2
KDM1AENSG00000004487.114343.588505582.10860-0.361903.074002.19660K562PCBP3
KDM1AENSG00000004487.113394.995904281.76950-0.334804.262303.26410K562POLR2G
KDM1AENSG00000004487.113727.425704502.60580-0.272602.159201.49290K562PRPF8
KDM1AENSG00000004487.113794.020004958.35540-0.386104.287603.12620K562PSIP1
KDM1AENSG00000004487.115032.466906035.08100-0.262102.709302.05150K562PTBP1
KDM1AENSG00000004487.119559.7102011874.71450-0.312903.214502.33660K562PUF60
KDM1AENSG00000004487.1110517.8347012375.51040-0.234703.362702.30310K562PUM2
KDM1AENSG00000004487.1110700.312106805.214200.6528011.1168010.07780K562PUS1
KDM1AENSG00000004487.119411.474406631.130100.5051012.1666010.92610K562RBM15
KDM1AENSG00000004487.113617.618504524.00460-0.322603.838802.66770K562RCC2
KDM1AENSG00000004487.113473.951904586.24920-0.400703.183202.30530K562RPS19
KDM1AENSG00000004487.113686.289104902.74320-0.411404.066902.82280K562RPS3
KDM1AENSG00000004487.113344.600404179.93250-0.321602.270301.39930K562SF3B1
KDM1AENSG00000004487.114502.224105412.63670-0.265703.092302.18550K562SF3B4
KDM1AENSG00000004487.113502.752204288.62010-0.292002.666601.66680K562SRFBP1
KDM1AENSG00000004487.113595.424104733.16570-0.396605.234403.70300K562SRSF4
KDM1AENSG00000004487.114616.619505987.83690-0.375203.661202.84290K562TARDBP
KDM1AENSG00000004487.113805.823605066.70690-0.412804.784103.46030K562TRIM56
KDM1AENSG00000004487.113056.972504058.26940-0.408803.301401.35710K562TRNAU1AP
KDM1AENSG00000004487.114484.454105211.37600-0.216702.181701.46870K562U2AF2
KDM1AENSG00000004487.113626.235404613.82800-0.347503.067201.99040K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KDM1A is not available on ENCORE database.





15 RBPs can affect the splicing of KDM1A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.190000.000000.00000excludedK562SRSF1
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.248000.000000.00000excludedK562SF3B4
SEKDM1AENSG00000004487.11chr1+233709192337097923356935233571272337687923376986-0.115000.000640.00843excludedK562AQR
SEKDM1AENSG00000004487.11chr1+2337091923370979233569612335712723376879233770130.183000.000480.07226includedHepG2TIA1
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.121000.000070.02393excludedK562GPKOW
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.172000.000000.00001excludedHepG2SF3A3
SEKDM1AENSG00000004487.11chr1+2337091923370979233569612335712723376879233770130.167000.000380.03313includedHepG2IGF2BP3
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.125000.000460.02528excludedHepG2SF3B4
SEKDM1AENSG00000004487.11chr1+2337091923370979233569612335712723376879233770130.141000.000610.06268includedHepG2TAF15
SEKDM1AENSG00000004487.11chr1+233997842339989623397717233978522340372023403853-0.054000.000350.00833excludedK562U2AF2
SEKDM1AENSG00000004487.11chr1+2337091923370979233569612335712723376879233770130.118000.000570.02444includedK562HNRNPU
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.196000.000000.00000excludedK562SF3B1
SEKDM1AENSG00000004487.11chr1+2337091923370979233569612335712723376879233770130.161000.000030.00245includedHepG2HNRNPU
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.143000.000030.01502excludedK562SERBP1
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.127000.000300.01589excludedK562PTBP1
SEKDM1AENSG00000004487.11chr1+233709192337097923356961233571272337687923377013-0.176000.000000.00001excludedK562HNRNPC
A3SSKDM1AENSG00000004487.11chr1+2339976623399896233997842339989623398616233986900.120000.000000.00000longerK562AQR
RIKDM1AENSG00000004487.11chr1+2340878523409002234087852340885923408942234090020.383000.002740.04679includedK562U2AF1
MXEKDM1AENSG00000004487.11chr1+2337091923370979233768792337701323356961233571272338156123381654-0.212000.000000.000002includedK562SF3B1
MXEKDM1AENSG00000004487.11chr1+2337091923370979233768792337701323356961233571272338156123381654-0.124000.000230.048792includedK562GPKOW

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KDM1A is not avaliable on ENCORE database.