HDGF

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HDGF	ENSG00000143321.18	244.75	253.48	249.12	ENCSR000AEF
HepG2	HDGF	ENSG00000143321.18	239.34	288.02	263.68	ENCSR985KAT
K562	HDGF	ENSG00000143321.18	366.08	404.53	385.30	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	HDGF-BGKLV36-K562	ENCSR793QPX	HDGF	K562	Released		ENCSR619PCR	shRNA	KD% = 82.9,80.8
knockdown followed by RNA-seq	HDGF-BGHLV31-HepG2	ENCSR634KHL	HDGF	HepG2	Released		ENCSR538QOG	shRNA	KD% = 86.3,87.2

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
HDGF	ENCAB173GGB	A303-170A	1				BGHLV31-39, Released, ENCODE3	BGKLV36-29, Released, ENCODE3
HDGF		42105S	1			Submitted, ENCORE2	BGHLV31-39, Released, ENCODE3	BGKLV36-29, Submitted, ENCORE2

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
HDGF	K562	shRNA	ENCSR793QPX	ENCSR619PCR	HDGF-BGKLV36-29,HDGF-BGKLV36-30	NT-BGKLV36-1C,NT-BGKLV36-2C	82.9,80.8	Released	ENCODE4
HDGF	HepG2	shRNA	ENCSR634KHL	ENCSR538QOG	HDGF_BGHLV31-39,HDGF_BGHLV31-40	NT-BGHLV31-1,NT-BGHLV31-2	86.3,87.2	Released	ENCODE3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HDGF is not avaliable on ENCORE database.

Proteins bound to RNA

HDGF RNA is bound by 45 proteins.

eCLIP assay for HDGF is not avaliable on ENCORE database.

45 proteins are bound to HDGF RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	156713128	156713178	-	3'-UTR,intron-Distal,intron-Proximal	6.75545	27.46297	HepG2	UPF1
chr1	156712564	156712583	-	3'-UTR,intron-Distal,intron-Proximal	6.98233	400.00000	K562	UPF1
chr1	156712131	156712154	-	3'-UTR,intron-Distal	4.67780	400.00000	K562	UPF1
chr1	156711976	156712001	-	3'-UTR,intron-Distal	4.57408	18.02265	K562	IGF2BP2
chr1	156712668	156712721	-	3'-UTR,intron-Distal	4.62944	20.44586	HepG2	UPF1
chr1	156712762	156712880	-	3'-UTR,intron-Distal,intron-Proximal	6.92984	66.60169	HepG2	UPF1
chr1	156712972	156713029	-	3'-UTR,intron-Distal,intron-Proximal	3.37740	6.16999	HepG2	LIN28B
chr1	156712582	156712632	-	3'-UTR,intron-Distal,intron-Proximal	4.14308	9.18141	HepG2	STAU2
chr1	156712971	156713028	-	3'-UTR,intron-Distal,intron-Proximal	5.40600	23.07727	HepG2	AKAP1
chr1	156712548	156712564	-	3'-UTR,intron-Distal,intron-Proximal	6.76968	400.00000	K562	UPF1
chr1	156712255	156712317	-	3'-UTR,intron-Distal,intron-Proximal	3.70042	400.00000	K562	PABPC4
chr1	156712916	156712976	-	3'-UTR,intron-Distal,intron-Proximal	3.18235	11.47329	K562	AKAP1
chr1	156712667	156712724	-	3'-UTR,intron-Distal	5.56939	400.00000	K562	UPF1
chr1	156712213	156712263	-	3'-UTR,intron-Distal,intron-Proximal	4.80639	27.16331	HepG2	AKAP1
chr1	156713017	156713057	-	3'-UTR,intron-Distal,intron-Proximal	3.49085	13.62814	K562	LIN28B
chr1	156712583	156712631	-	3'-UTR,intron-Distal,intron-Proximal	6.13609	400.00000	K562	UPF1
chr1	156711974	156712030	-	3'-UTR,intron-Distal	5.01321	23.18844	HepG2	AKAP1
chr1	156712674	156712721	-	3'-UTR,intron-Distal	6.06004	18.04053	HepG2	AKAP1
chr1	156712679	156712710	-	3'-UTR,intron-Distal	3.57944	18.50472	K562	FAM120A
chr1	156712022	156712091	-	3'-UTR,intron-Distal	3.12759	11.59722	HepG2	PCBP2
chr1	156712452	156712514	-	3'-UTR,intron-Distal	4.80610	400.00000	K562	UPF1
chr1	156712109	156712131	-	3'-UTR,intron-Distal	4.86231	400.00000	K562	UPF1
chr1	156712220	156712302	-	3'-UTR,intron-Distal,intron-Proximal	3.59075	20.79086	K562	PCBP1
chr1	156712913	156712971	-	3'-UTR,intron-Distal,intron-Proximal	6.69384	26.51803	HepG2	AKAP1
chr1	156712916	156712974	-	3'-UTR,intron-Distal,intron-Proximal	3.03336	6.88659	HepG2	LARP4
chr1	156712001	156712023	-	3'-UTR,intron-Distal	3.75683	13.27659	K562	IGF2BP2
chr1	156712466	156712510	-	3'-UTR,intron-Distal	3.38389	12.04672	K562	AKAP1
chr1	156711936	156712023	-	3'-UTR,intron-Distal	3.20191	41.03627	K562	FAM120A
chr1	156712908	156712974	-	3'-UTR,intron-Distal,intron-Proximal	4.87046	25.88560	HepG2	UPF1
chr1	156713159	156713213	-	3'-UTR,intron-Distal	4.26837	66.84016	K562	UPF1
chr1	156713159	156713225	-	3'-UTR,intron-Distal	3.20963	14.32419	K562	AKAP1
chr1	156713053	156713139	-	3'-UTR,intron-Distal,intron-Proximal	3.70788	29.83785	K562	AKAP1
chr1	156712216	156712257	-	3'-UTR,intron-Distal,intron-Proximal	3.71099	19.32656	HepG2	PCBP2
chr1	156713149	156713227	-	3'-UTR,intron-Distal	5.58369	23.25085	HepG2	AKAP1
chr1	156712920	156712947	-	3'-UTR,intron-Distal,intron-Proximal	3.26369	38.21388	K562	UPF1
chr1	156712595	156712620	-	3'-UTR,intron-Distal,intron-Proximal	5.36066	11.32637	HepG2	AKAP1
chr1	156712530	156712610	-	3'-UTR,intron-Distal,intron-Proximal	3.92095	19.27004	K562	AKAP1
chr1	156712519	156712573	-	3'-UTR,intron-Distal,intron-Proximal	5.57959	24.23015	HepG2	UPF1
chr1	156713054	156713121	-	3'-UTR,intron-Distal,intron-Proximal	3.94238	400.00000	K562	UPF1
chr1	156711999	156712021	-	3'-UTR,intron-Distal	3.62442	10.08726	HepG2	UPF1
chr1	156712117	156712177	-	3'-UTR,intron-Distal	3.64951	41.58571	K562	FAM120A
chr1	156712517	156712576	-	3'-UTR,intron-Distal,intron-Proximal	3.69796	48.36766	K562	FAM120A
chr1	156712514	156712548	-	3'-UTR,intron-Distal,intron-Proximal	6.10037	400.00000	K562	UPF1
chr1	156712167	156712202	-	3'-UTR,intron-Distal	4.17079	400.00000	K562	UPF1
chr1	156712724	156712797	-	3'-UTR,intron-Distal	5.73478	400.00000	K562	UPF1
chr1	156712225	156712311	-	3'-UTR,intron-Distal,intron-Proximal	3.01771	23.10515	K562	AKAP1
chr1	156711982	156712075	-	3'-UTR,intron-Distal	3.19287	21.61441	K562	PCBP1
chr1	156713145	156713226	-	3'-UTR,intron-Distal	3.67242	8.46777	HepG2	LARP4
chr1	156713036	156713052	-	3'-UTR,intron-Distal,intron-Proximal	4.16892	37.70861	K562	UPF1
chr1	156712756	156712839	-	3'-UTR,intron-Distal	3.56302	4.55636	HepG2	PRPF4
chr1	156712847	156712868	-	3'-UTR,intron-Distal,intron-Proximal	5.78798	50.34236	K562	UPF1
chr1	156712989	156713030	-	3'-UTR,intron-Distal,intron-Proximal	3.44900	21.39362	K562	FAM120A
chr1	156712731	156712809	-	3'-UTR,intron-Distal	3.55206	9.61368	HepG2	GRSF1
chr1	156712099	156712195	-	3'-UTR,intron-Distal	3.76463	32.59867	K562	AKAP1
chr1	156712269	156712315	-	3'-UTR,intron-Distal,intron-Proximal	3.36350	400.00000	K562	UPF1
chr1	156712813	156712893	-	3'-UTR,intron-Distal,intron-Proximal	3.26144	6.16089	HepG2	GRSF1
chr1	156712256	156712269	-	3'-UTR,intron-Distal,intron-Proximal	3.59882	400.00000	K562	UPF1
chr1	156712738	156712824	-	3'-UTR,intron-Distal	3.06264	17.89980	K562	AKAP1
chr1	156712975	156713030	-	3'-UTR,intron-Distal,intron-Proximal	4.88726	18.92797	HepG2	UPF1
chr1	156712154	156712167	-	3'-UTR,intron-Distal	4.38351	400.00000	K562	UPF1
chr1	156712257	156712315	-	3'-UTR,intron-Distal,intron-Proximal	3.22883	17.75555	HepG2	PCBP2
chr1	156712576	156712626	-	3'-UTR,intron-Distal,intron-Proximal	4.01822	29.40937	K562	FAM120A
chr1	156712097	156712109	-	3'-UTR,intron-Distal	4.38907	51.23172	K562	UPF1
chr1	156712460	156712507	-	3'-UTR,intron-Distal	4.44031	16.18572	HepG2	AKAP1
chr1	156712113	156712193	-	3'-UTR,intron-Distal	6.96839	33.19937	HepG2	UPF1
chr1	156712539	156712568	-	3'-UTR,intron-Distal,intron-Proximal	4.13351	10.25565	HepG2	AKAP1
chr1	156712976	156713030	-	3'-UTR,intron-Distal,intron-Proximal	3.77287	12.58637	K562	AKAP1
chr1	156712081	156712110	-	3'-UTR,intron-Distal	4.05076	11.29390	HepG2	AKAP1
chr1	156712452	156712501	-	3'-UTR,intron-Distal	6.28954	21.13033	HepG2	UPF1
chr1	156713035	156713084	-	3'-UTR,intron-Distal,intron-Proximal	4.59433	24.54508	HepG2	UPF1
chr1	156712010	156712023	-	3'-UTR,intron-Distal	3.84470	59.63423	K562	UPF1
chr1	156712210	156712314	-	3'-UTR,intron-Distal,intron-Proximal	3.13509	59.86445	K562	FAM120A
chr1	156712726	156712786	-	3'-UTR,intron-Distal	3.51747	24.57789	K562	FAM120A
chr1	156712027	156712069	-	3'-UTR,intron-Distal	3.16873	6.22791	HepG2	LARP4
chr1	156712209	156712261	-	3'-UTR,intron-Distal,intron-Proximal	3.27548	7.08095	HepG2	FAM120A
chr1	156711965	156712010	-	3'-UTR,intron-Distal	4.34720	400.00000	K562	UPF1
chr1	156713044	156713139	-	3'-UTR,intron-Distal,intron-Proximal	5.15331	34.89103	HepG2	AKAP1
chr1	156712263	156712311	-	3'-UTR,intron-Distal,intron-Proximal	4.41041	24.88556	HepG2	AKAP1
chr1	156713084	156713128	-	3'-UTR,intron-Distal,intron-Proximal	4.72056	22.88750	HepG2	UPF1
chr1	156712560	156712582	-	3'-UTR,intron-Distal,intron-Proximal	3.01665	7.14933	HepG2	STAU2
chr1	156712974	156713017	-	3'-UTR,intron-Distal,intron-Proximal	3.35250	15.70095	K562	LIN28B
chr1	156713030	156713107	-	3'-UTR,intron-Distal,intron-Proximal	3.24945	44.41467	K562	FAM120A
chr1	156712729	156712762	-	3'-UTR,intron-Distal	5.27281	27.06850	HepG2	UPF1
chr1	156715145	156715163	-	3'-UTR,CDS,intron-Distal	3.32280	4.24070	HepG2	GRWD1
chr1	156712069	156712117	-	3'-UTR,intron-Distal	3.28733	7.99409	HepG2	LARP4
chr1	156712211	156712255	-	3'-UTR,intron-Distal,intron-Proximal	3.82280	400.00000	K562	UPF1
chr1	156712110	156712198	-	3'-UTR,intron-Distal	4.16007	25.93798	HepG2	AKAP1
chr1	156712901	156712979	-	3'-UTR,intron-Distal,intron-Proximal	3.79271	8.86280	K562	PCBP1
chr1	156713163	156713226	-	3'-UTR,intron-Distal	3.53601	5.51367	HepG2	G3BP1
chr1	156712743	156712804	-	3'-UTR,intron-Distal	6.25984	20.62688	HepG2	AKAP1
chr1	156713178	156713227	-	3'-UTR,intron-Distal	5.12541	22.11592	HepG2	UPF1
chr1	156712217	156712311	-	3'-UTR,intron-Distal,intron-Proximal	5.04397	34.84454	HepG2	UPF1
chr1	156711950	156712027	-	3'-UTR,intron-Distal	3.10223	10.81378	HepG2	LARP4
chr1	156712030	156712053	-	3'-UTR,intron-Distal	5.47632	11.96310	HepG2	AKAP1
chr1	156713191	156713246	-	3'-UTR,CDS,intron-Distal	3.27378	7.19724	K562	ZNF800
chr1	156712544	156712597	-	3'-UTR,intron-Distal,intron-Proximal	4.13886	17.74943	K562	RPS3
chr1	156721336	156721372	-	5'-UTR,intron-Distal,intron-Proximal	5.15785	43.30354	HepG2	DDX3X
chr1	156721470	156721536	-	5'-UTR,intron-Distal,intron-Proximal	3.92694	11.22318	K562	GTF2F1
chr1	156721473	156721541	-	5'-UTR,intron-Distal,intron-Proximal	4.58942	5.56287	HepG2	GTF2F1
chr1	156721354	156721439	-	5'-UTR,intron-Distal,intron-Proximal	4.37822	3.36507	K562	SERBP1
chr1	156721019	156721067	-	5'-UTR,intron-Distal	3.13538	3.46580	HepG2	CSTF2T
chr1	156721478	156721526	-	5'-UTR,intron-Distal,intron-Proximal	3.76644	5.40194	HepG2	FAM120A
chr1	156721205	156721277	-	5'-UTR,CDS,intron-Distal	5.50854	47.51244	HepG2	DDX3X
chr1	156721372	156721435	-	5'-UTR,intron-Distal,intron-Proximal	4.08900	33.74461	HepG2	DDX3X
chr1	156721215	156721297	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.68968	8.15566	K562	SERBP1
chr1	156721279	156721336	-	5'-UTR,intron-Distal,intron-Proximal	4.25008	38.80546	HepG2	DDX3X
chr1	156721197	156721288	-	5'-UTR,CDS,intron-Distal	3.09825	9.64045	K562	DDX3X
chr1	156721475	156721561	-	5'-UTR,intron-Distal,intron-Proximal	3.02352	5.50952	HepG2	PRPF4
chr1	156713941	156714062	-	CDS,intron-Distal,intron-Proximal	3.66802	3.67487	HepG2	FTO
chr1	156714764	156714820	-	CDS,intron-Distal,intron-Proximal	4.07927	6.78984	HepG2	AQR
chr1	156721135	156721205	-	CDS,intron-Distal,intron-Proximal	3.43318	10.19648	HepG2	DDX3X
chr1	156713973	156713988	-	CDS,intron-Distal	5.02469	37.35771	K562	UPF1
chr1	156713639	156713670	-	CDS,intron-Distal	3.59727	5.77413	K562	DDX24
chr1	156713988	156714010	-	CDS,intron-Distal	4.88821	33.92526	K562	UPF1
chr1	156714034	156714088	-	CDS,intron-Distal,intron-Proximal	3.86626	9.82220	HepG2	G3BP1
chr1	156713954	156713971	-	CDS,intron-Distal,intron-Proximal	3.09046	11.51637	K562	ZNF622
chr1	156714912	156714928	-	CDS,intron-Distal	3.05363	6.55081	K562	FXR2
chr1	156714094	156714131	-	CDS,intron-Distal,intron-Proximal	3.18616	4.84084	K562	ZNF800
chr1	156713454	156713484	-	CDS,intron-Distal,intron-Proximal	3.95324	6.50179	HepG2	BUD13
chr1	156713632	156713671	-	CDS,intron-Distal,intron-Proximal	3.25501	18.35924	K562	UCHL5
chr1	156713953	156714039	-	CDS,intron-Distal,intron-Proximal	4.01990	5.50166	HepG2	FXR2
chr1	156713626	156713670	-	CDS,intron-Distal,intron-Proximal	3.22239	3.72388	HepG2	FXR2
chr1	156713954	156713964	-	CDS,intron-Distal,intron-Proximal	3.78957	6.15559	K562	PABPC4
chr1	156721089	156721139	-	CDS,intron-Distal,intron-Proximal	3.73026	6.95612	HepG2	PRPF8
chr1	156715088	156715094	-	CDS,intron-Distal,intron-Proximal	3.37076	5.61744	K562	FXR2
chr1	156713647	156713712	-	CDS,intron-Distal,intron-Proximal	3.06563	7.85421	K562	SF3B4
chr1	156715088	156715108	-	CDS,intron-Distal,intron-Proximal	3.77361	5.73936	K562	FMR1
chr1	156713425	156713486	-	CDS,intron-Distal,intron-Proximal	3.53268	7.47194	HepG2	GRWD1
chr1	156713454	156713535	-	CDS,intron-Distal,intron-Proximal	3.06429	3.07617	K562	SRSF7
chr1	156714133	156714193	-	CDS,intron-Distal,intron-Proximal	4.41897	14.54031	K562	SF3B4
chr1	156715088	156715106	-	CDS,intron-Distal,intron-Proximal	3.38418	3.47314	HepG2	G3BP1
chr1	156713595	156713670	-	CDS,intron-Distal,intron-Proximal	5.03821	78.83589	K562	UPF1
chr1	156715112	156715131	-	CDS,intron-Distal	3.53092	7.59425	K562	YBX3
chr1	156715071	156715108	-	CDS,intron-Distal,intron-Proximal	3.02773	3.78791	K562	RBM15
chr1	156714117	156714199	-	CDS,intron-Distal,intron-Proximal	3.26656	9.31830	HepG2	AQR
chr1	156713588	156713634	-	CDS,intron-Distal,intron-Proximal	3.15873	10.20327	K562	DDX6
chr1	156715088	156715112	-	CDS,intron-Distal,intron-Proximal	3.03134	5.61593	K562	PUM1
chr1	156713627	156713660	-	CDS,intron-Distal,intron-Proximal	3.73296	3.26022	HepG2	PRPF4
chr1	156713447	156713483	-	CDS,intron-Distal,intron-Proximal	3.43324	5.99947	HepG2	G3BP1
chr1	156713970	156714020	-	CDS,intron-Distal	3.30818	7.96301	HepG2	G3BP1
chr1	156714039	156714056	-	CDS,intron-Distal	4.02269	26.53994	K562	UPF1
chr1	156713959	156713985	-	CDS,intron-Distal	3.24458	14.36470	K562	FAM120A
chr1	156713964	156714026	-	CDS,intron-Distal	4.42012	35.23900	K562	UCHL5
chr1	156713954	156713973	-	CDS,intron-Distal,intron-Proximal	4.48059	40.93678	K562	UPF1
chr1	156713905	156713980	-	CDS,intron-Distal,intron-Proximal	4.56265	13.14214	HepG2	PRPF8
chr1	156713955	156713983	-	CDS,intron-Distal	4.98556	6.07551	HepG2	LARP4
chr1	156715039	156715101	-	CDS,intron-Distal,intron-Proximal	5.06743	6.03362	HepG2	AQR
chr1	156713956	156713959	-	CDS,intron-Distal	3.48937	9.26730	K562	FAM120A
chr1	156714026	156714092	-	CDS,intron-Distal,intron-Proximal	4.13687	25.33243	K562	UCHL5
chr1	156721178	156721199	-	CDS,intron-Distal,intron-Proximal	3.68095	13.83345	K562	YBX3
chr1	156715094	156715108	-	CDS,intron-Distal	3.33290	5.35067	K562	FXR2
chr1	156713646	156713669	-	CDS,intron-Distal	3.81768	6.66357	K562	ZNF800
chr1	156721166	156721178	-	CDS,intron-Distal,intron-Proximal	3.23393	13.44335	K562	YBX3
chr1	156714762	156714818	-	CDS,intron-Distal,intron-Proximal	3.15426	6.93483	HepG2	PRPF8
chr1	156714800	156714890	-	CDS,intron-Distal	3.41948	4.08114	HepG2	UCHL5
chr1	156713953	156713962	-	CDS,intron-Distal,intron-Proximal	3.23980	12.46213	K562	UCHL5
chr1	156713663	156713669	-	CDS,intron-Distal	4.30256	10.95110	K562	PABPC4
chr1	156721199	156721212	-	CDS,intron-Distal	3.58203	9.01971	K562	YBX3
chr1	156713955	156714059	-	CDS,intron-Distal	3.67974	4.03783	HepG2	TRA2A
chr1	156714796	156714888	-	CDS,intron-Distal,intron-Proximal	3.17416	4.86633	K562	RBM15
chr1	156713398	156713456	-	CDS,intron-Distal,intron-Proximal	4.23922	14.67766	HepG2	PRPF8
chr1	156713483	156713596	-	CDS,intron-Distal,intron-Proximal	4.00815	11.88870	HepG2	G3BP1
chr1	156713598	156713668	-	CDS,intron-Distal,intron-Proximal	3.83964	7.65887	HepG2	GRWD1
chr1	156713950	156714056	-	CDS,intron-Distal,intron-Proximal	3.67794	21.59317	K562	ZNF800
chr1	156713952	156714016	-	CDS,intron-Distal,intron-Proximal	3.69666	16.76105	HepG2	PPIG
chr1	156714940	156715036	-	intron-Distal,intron-Proximal	3.88995	9.63838	HepG2	EFTUD2
chr1	156716924	156717026	-	intron-Distal	5.21289	7.33617	K562	GTF2F1
chr1	156714145	156714197	-	intron-Distal,intron-Proximal	4.31151	7.30450	K562	DROSHA
chr1	156714163	156714177	-	intron-Distal,intron-Proximal	5.45449	3.65355	K562	EFTUD2
chr1	156716936	156717032	-	intron-Distal	4.33864	8.56193	HepG2	FAM120A
chr1	156713862	156713887	-	intron-Distal,intron-Proximal	5.22183	7.28294	K562	AQR
chr1	156716785	156716861	-	intron-Distal	3.29677	3.25653	K562	CSTF2T
chr1	156713923	156713955	-	intron-Distal,intron-Proximal	4.47397	28.64455	K562	AQR
chr1	156720799	156720875	-	intron-Distal	4.28539	3.55064	HepG2	SFPQ
chr1	156714755	156714789	-	intron-Distal,intron-Proximal	5.26975	21.77316	K562	AQR
chr1	156718549	156718597	-	intron-Distal	3.00429	3.25653	K562	CSTF2T
chr1	156716785	156716878	-	intron-Distal	4.48839	10.62681	HepG2	CSTF2T
chr1	156718728	156718850	-	intron-Distal	4.38154	4.17759	HepG2	QKI
chr1	156713382	156713423	-	intron-Distal,intron-Proximal	4.29870	7.70980	K562	BUD13
chr1	156716939	156717006	-	intron-Distal	4.15372	3.58113	K562	EWSR1
chr1	156716932	156717021	-	intron-Distal	4.95615	7.92947	HepG2	CSTF2T
chr1	156716920	156716999	-	intron-Distal	4.62064	5.66217	K562	NONO
chr1	156720894	156720975	-	intron-Distal	4.26282	4.58989	K562	NONO
chr1	156713409	156713433	-	intron-Distal,intron-Proximal	4.01431	9.78274	K562	AQR
chr1	156714789	156714800	-	intron-Distal,intron-Proximal	4.37261	18.77477	K562	AQR
chr1	156714986	156715053	-	intron-Distal,intron-Proximal	3.67891	8.91060	K562	PRPF8
chr1	156713433	156713444	-	intron-Distal,intron-Proximal	3.62041	8.38394	K562	AQR
chr1	156714354	156714381	-	intron-Distal,intron-Proximal	3.00698	3.78727	K562	PRPF8
chr1	156718933	156718979	-	intron-Distal	4.00926	3.02711	K562	EWSR1
chr1	156716924	156717023	-	intron-Distal	3.61522	4.16791	HepG2	NKRF
chr1	156714143	156714206	-	intron-Distal,intron-Proximal	4.44819	8.91844	K562	GTF2F1
chr1	156714943	156715007	-	intron-Distal,intron-Proximal	3.61872	4.57180	HepG2	AQR
chr1	156718629	156718739	-	intron-Distal	4.80638	6.57498	HepG2	PCBP2
chr1	156716922	156717026	-	intron-Distal	5.29102	10.24558	K562	CSTF2T
chr1	156717251	156717301	-	intron-Distal,intron-Proximal	4.25637	3.63902	HepG2	CSTF2T
chr1	156714988	156715032	-	intron-Distal,intron-Proximal	4.05508	3.53160	K562	RBFOX2
chr1	156713401	156713409	-	intron-Distal,intron-Proximal	4.40489	10.54823	K562	AQR
chr1	156716551	156716613	-	intron-Distal	4.54885	5.84605	HepG2	CSTF2T
chr1	156713921	156713945	-	intron-Distal,intron-Proximal	4.44231	5.29191	K562	BUD13
chr1	156714143	156714205	-	intron-Distal,intron-Proximal	6.48936	13.61356	HepG2	EFTUD2
chr1	156720818	156720894	-	intron-Distal	4.59774	5.40320	K562	NONO
chr1	156713910	156713923	-	intron-Distal,intron-Proximal	6.24004	28.79722	K562	AQR
chr1	156720344	156720380	-	intron-Distal	3.79960	3.40229	HepG2	CSTF2T
chr1	156721092	156721135	-	intron-Distal,intron-Proximal	5.10331	4.65563	K562	AQR
chr1	156714140	156714199	-	intron-Distal,intron-Proximal	4.59008	6.78736	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HDGF is not avaliable on ENCORE database.

Diffrential Expression

3,150 differentially expressed genes after Knockdown/Knockout HDGF protein.

127 RBPs can affect the levels of HDGF.

3,150 differentially expressed genes after Knockdown/Knockout HDGF protein :

Only display 100 entries as example. Please click "View All" button to see all 3,150 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SCYL3	ENSG00000000457.9	170.59980	114.34840	0.57710	2.57900	1.63040	HepG2	HDGF
C1orf112	ENSG00000000460.12	232.54180	345.61620	-0.57170	4.40220	3.18900	HepG2	HDGF
GCLC	ENSG00000001084.6	1611.02090	1135.04750	0.50510	7.71620	6.18640	HepG2	HDGF
NIPAL3	ENSG00000001461.12	336.83140	236.97180	0.50720	3.56100	2.46270	HepG2	HDGF
LAS1L	ENSG00000001497.12	603.44500	791.50090	-0.39140	4.12660	2.94830	HepG2	HDGF
SEMA3F	ENSG00000001617.7	677.62770	488.01570	0.47350	5.11370	3.82730	HepG2	HDGF
CYP51A1	ENSG00000001630.11	2791.28910	5231.45980	-0.90630	41.09290	38.15180	HepG2	HDGF
DBNDD1	ENSG00000003249.9	1105.17330	810.25310	0.44770	4.40120	3.18830	HepG2	HDGF
TFPI	ENSG00000003436.10	18976.11320	10259.23180	0.88720	16.95590	14.89090	HepG2	HDGF
ARF5	ENSG00000004059.6	1043.06820	796.22140	0.38950	4.69900	3.45820	HepG2	HDGF
PLXND1	ENSG00000004399.8	3350.74440	2731.09990	0.29490	4.68170	3.44210	HepG2	HDGF
KDM1A	ENSG00000004487.11	2462.68500	2916.08050	-0.24380	3.29010	2.23070	HepG2	HDGF
ST7	ENSG00000004866.14	270.19470	357.06140	-0.40220	2.36630	1.45620	HepG2	HDGF
DVL2	ENSG00000004975.7	712.19880	867.40630	-0.28440	2.56290	1.61670	HepG2	HDGF
DHX33	ENSG00000005100.8	1021.86100	1217.65370	-0.25290	2.49460	1.56220	HepG2	HDGF
LIG3	ENSG00000005156.7	561.38550	741.64380	-0.40170	4.16940	2.98500	HepG2	HDGF
RHBDD2	ENSG00000005486.12	705.53610	548.30890	0.36360	3.36140	2.29080	HepG2	HDGF
ITGA3	ENSG00000005884.13	134.40610	67.55360	0.99240	4.86530	3.60540	HepG2	HDGF
ZFX	ENSG00000005889.11	800.08120	963.55060	-0.26820	2.48510	1.55370	HepG2	HDGF
ASB4	ENSG00000005981.8	145.21630	61.84260	1.23140	5.03990	3.76150	HepG2	HDGF
GDE1	ENSG00000006007.7	2028.45730	1587.18740	0.35380	5.51290	4.18380	HepG2	HDGF
CRLF1	ENSG00000006016.6	7941.17270	4758.03170	0.73890	9.13510	7.49340	HepG2	HDGF
OSBPL7	ENSG00000006025.7	327.65330	249.46420	0.39320	2.27930	1.38620	HepG2	HDGF
TMEM132A	ENSG00000006118.10	1448.64830	1003.58800	0.52940	9.49360	7.82090	HepG2	HDGF
CX3CL1	ENSG00000006210.6	3645.32440	2596.99010	0.48910	11.95080	10.14060	HepG2	HDGF
TNFRSF12A	ENSG00000006327.9	1345.25140	775.39800	0.79480	10.78860	9.03620	HepG2	HDGF
BAIAP2L1	ENSG00000006453.9	1026.09480	697.43080	0.55690	8.68830	7.07400	HepG2	HDGF
DBF4	ENSG00000006634.3	325.41650	479.14450	-0.55820	4.20340	3.01710	HepG2	HDGF
IFRD1	ENSG00000006652.9	1041.13880	664.19200	0.64840	11.48700	9.69660	HepG2	HDGF
ARSD	ENSG00000006756.11	433.89180	284.28280	0.60990	5.79880	4.44410	HepG2	HDGF
PAFAH1B1	ENSG00000007168.8	1646.63840	2026.34030	-0.29940	4.05400	2.88530	HepG2	HDGF
LUC7L	ENSG00000007392.12	1475.96190	1185.44490	0.31610	4.04190	2.87540	HepG2	HDGF
MYLIP	ENSG00000007944.10	172.33750	120.55930	0.51540	2.22230	1.34030	HepG2	HDGF
SPAG9	ENSG00000008294.16	3714.21730	4317.19960	-0.21700	2.97110	1.96290	HepG2	HDGF
MGST1	ENSG00000008394.8	1001.57510	1487.98080	-0.57110	9.05870	7.42100	HepG2	HDGF
CRY1	ENSG00000008405.7	551.07470	430.82130	0.35510	2.80290	1.82010	HepG2	HDGF
NFIX	ENSG00000008441.12	369.53040	526.97710	-0.51200	4.93700	3.67100	HepG2	HDGF
PKD1	ENSG00000008710.13	1773.42120	1452.56990	0.28780	2.59840	1.64660	HepG2	HDGF
RPS20	ENSG00000008988.5	5428.76010	6449.15470	-0.24850	3.98050	2.82280	HepG2	HDGF
MLXIPL	ENSG00000009950.11	2346.51920	3511.18500	-0.58140	14.45640	12.51530	HepG2	HDGF
BAZ1B	ENSG00000009954.6	2664.84180	3082.40450	-0.21000	2.54360	1.60230	HepG2	HDGF
ZNF207	ENSG00000010244.12	2933.02000	3770.38730	-0.36230	7.04560	5.57620	HepG2	HDGF
NCAPD2	ENSG00000010292.8	2725.80390	3847.89970	-0.49740	12.65850	10.81230	HepG2	HDGF
GIPR	ENSG00000010310.4	88.39120	42.09450	1.07020	2.78280	1.80320	HepG2	HDGF
SEMA3G	ENSG00000010319.2	1026.02760	807.65260	0.34520	3.85450	2.71550	HepG2	HDGF
IDS	ENSG00000010404.13	1063.22930	762.94440	0.47870	6.86430	5.41090	HepG2	HDGF
CD4	ENSG00000010610.5	80.06770	41.05270	0.96360	3.06840	2.04380	HepG2	HDGF
HIVEP2	ENSG00000010818.4	1755.06570	1245.74440	0.49440	9.36400	7.70670	HepG2	HDGF
TCEB3	ENSG00000011007.8	1242.56550	1012.37450	0.29550	3.29780	2.23710	HepG2	HDGF
LYPLA2	ENSG00000011009.6	1639.14980	1217.20270	0.42930	6.99730	5.53330	HepG2	HDGF
CLCN6	ENSG00000011021.17	1284.34650	1927.68260	-0.58580	8.20890	6.63710	HepG2	HDGF
NME2	ENSG00000011052.17	119.72720	332.08430	-1.47180	7.56220	6.04760	HepG2	HDGF
TSPAN9	ENSG00000011105.7	1589.32340	1316.99540	0.27110	2.77550	1.79790	HepG2	HDGF
ABHD5	ENSG00000011198.3	113.16990	68.61090	0.72190	2.61490	1.66130	HepG2	HDGF
MBTD1	ENSG00000011258.11	1069.56560	1341.33510	-0.32660	3.97660	2.81980	HepG2	HDGF
RNF216	ENSG00000011275.14	1556.81650	1214.57430	0.35800	4.98530	3.71280	HepG2	HDGF
PTBP1	ENSG00000011304.12	5035.52520	5999.05100	-0.25260	4.15730	2.97540	HepG2	HDGF
ANLN	ENSG00000011426.6	1495.39280	2659.23240	-0.83050	13.04960	11.17410	HepG2	HDGF
BRCA1	ENSG00000012048.15	547.10000	846.57060	-0.62980	8.27670	6.69730	HepG2	HDGF
NR1H4	ENSG00000012504.9	445.43150	673.00490	-0.59540	7.52610	6.01340	HepG2	HDGF
ELOVL5	ENSG00000012660.9	2975.56000	2372.93450	0.32640	4.90160	3.64000	HepG2	HDGF
UBR7	ENSG00000012963.9	510.58010	644.43600	-0.33590	2.78760	1.80750	HepG2	HDGF
MVP	ENSG00000013364.14	1333.90400	734.36780	0.86100	21.60120	19.31860	HepG2	HDGF
PGM3	ENSG00000013375.11	2143.60510	2653.13420	-0.30770	4.67740	3.43900	HepG2	HDGF
CLK1	ENSG00000013441.11	1763.90780	1483.72140	0.24950	2.77900	1.80070	HepG2	HDGF
TACC3	ENSG00000013810.14	1005.72240	1513.85520	-0.59000	7.60840	6.08900	HepG2	HDGF
POLA2	ENSG00000014138.4	272.30680	364.29930	-0.41990	2.81380	1.82940	HepG2	HDGF
COX15	ENSG00000014919.8	635.55860	775.39570	-0.28690	2.42770	1.50560	HepG2	HDGF
CCDC88C	ENSG00000015133.14	352.84480	507.24610	-0.52370	5.08910	3.80480	HepG2	HDGF
DPEP1	ENSG00000015413.5	390.68970	247.90160	0.65620	5.43020	4.10850	HepG2	HDGF
MATR3	ENSG00000015479.13	6292.06940	7674.48320	-0.28650	5.32450	4.01530	HepG2	HDGF
XYLT2	ENSG00000015532.5	1128.32960	792.58920	0.50940	4.68040	3.44110	HepG2	HDGF
SLC38A5	ENSG00000017483.10	936.31150	716.67520	0.38560	4.39390	3.18190	HepG2	HDGF
CD74	ENSG00000019582.10	1975.89430	1417.24450	0.47930	4.78410	3.53390	HepG2	HDGF
MRE11A	ENSG00000020922.8	505.47280	694.81010	-0.45900	2.49930	1.56630	HepG2	HDGF
PLEKHB1	ENSG00000021300.9	1716.85570	1351.76350	0.34480	4.87350	3.61300	HepG2	HDGF
SERPINB1	ENSG00000021355.8	1076.54520	1391.81020	-0.37060	4.98390	3.71180	HepG2	HDGF
CYP3A43	ENSG00000021461.12	11.75090	44.69340	-1.92730	4.95020	3.68220	HepG2	HDGF
CPS1	ENSG00000021826.10	1139.62960	1395.44080	-0.29220	3.33840	2.27090	HepG2	HDGF
ZNF839	ENSG00000022976.11	307.79970	235.41770	0.38670	2.19390	1.31670	HepG2	HDGF
ZDHHC6	ENSG00000023041.7	513.62350	644.95850	-0.32850	2.67850	1.71480	HepG2	HDGF
NDUFS1	ENSG00000023228.9	3200.83400	3871.30180	-0.27440	4.30470	3.10300	HepG2	HDGF
ERP44	ENSG00000023318.7	1442.28350	1228.07660	0.23190	2.38470	1.47090	HepG2	HDGF
BIRC3	ENSG00000023445.9	112.66110	69.64640	0.69380	2.45630	1.52950	HepG2	HDGF
ABCC2	ENSG00000023839.6	9285.02450	8106.12920	0.19580	2.85460	1.86250	HepG2	HDGF
GCLM	ENSG00000023909.5	540.06300	388.21210	0.47620	4.46470	3.24540	HepG2	HDGF
EHD2	ENSG00000024422.7	125.47770	49.37350	1.34550	7.27830	5.78670	HepG2	HDGF
DEPDC1	ENSG00000024526.12	389.05780	640.26980	-0.71870	9.94150	8.24200	HepG2	HDGF
TOMM34	ENSG00000025772.7	1373.54400	1153.25950	0.25210	2.58600	1.63600	HepG2	HDGF
RNASET2	ENSG00000026297.11	5887.81400	4474.25670	0.39600	9.19210	7.54710	HepG2	HDGF
IFNGR1	ENSG00000027697.8	1625.75760	1336.68220	0.28240	3.07350	2.04740	HepG2	HDGF
VEZT	ENSG00000028203.13	929.13040	777.46990	0.25700	2.25780	1.36930	HepG2	HDGF
HMGB3	ENSG00000029993.10	616.24250	915.22730	-0.57060	8.46650	6.87440	HepG2	HDGF
GRN	ENSG00000030582.12	5359.63520	4318.36800	0.31150	3.11360	2.08030	HepG2	HDGF
SARS	ENSG00000031698.8	2187.96880	1339.79340	0.70750	19.61480	17.43270	HepG2	HDGF
CHPF2	ENSG00000033100.10	1273.77640	838.81890	0.60260	11.23210	9.45620	HepG2	HDGF
ATP6V0A1	ENSG00000033627.10	1613.67010	1320.59260	0.28910	3.47480	2.38920	HepG2	HDGF
SLC4A7	ENSG00000033867.12	1416.82310	1196.86530	0.24330	2.55080	1.60710	HepG2	HDGF
UHRF1	ENSG00000034063.9	596.24480	1342.42190	-1.17090	37.02700	34.19860	HepG2	HDGF
TMSB10	ENSG00000034510.4	5710.61840	4496.65120	0.34470	7.06160	5.59010	HepG2	HDGF
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

127 RBPs can affect the gene expression of HDGF :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HDGF	ENSG00000143321.14	6510.44400	9242.72900	-0.50560	5.44200	4.17230	HepG2	ABCF1
HDGF	ENSG00000143321.14	4386.85860	5740.52650	-0.38800	10.39790	9.37630	HepG2	ACO1
HDGF	ENSG00000143321.14	6391.07580	9315.24160	-0.54350	5.40490	4.69070	HepG2	AKAP1
HDGF	ENSG00000143321.14	4762.82270	5767.25290	-0.27610	4.73750	3.75510	HepG2	AKAP8L
HDGF	ENSG00000143321.14	6846.49480	8341.94900	-0.28500	2.73650	1.34220	HepG2	ATP5C1
HDGF	ENSG00000143321.14	6539.54780	8969.01640	-0.45580	13.21060	11.90790	HepG2	AUH
HDGF	ENSG00000143321.14	3087.97270	4768.91070	-0.62700	7.57610	6.17630	HepG2	BCLAF1
HDGF	ENSG00000143321.14	5732.66940	6925.56810	-0.27270	2.53350	1.35660	HepG2	BUD13
HDGF	ENSG00000143321.14	5217.28140	7287.06250	-0.48200	8.99870	7.72290	HepG2	CALR
HDGF	ENSG00000143321.14	5670.70320	10293.68420	-0.86020	10.76700	8.88340	HepG2	CCAR1
HDGF	ENSG00000143321.14	3247.74210	5086.65870	-0.64730	4.62090	3.62830	HepG2	CNOT7
HDGF	ENSG00000143321.14	5089.44070	6988.35690	-0.45740	5.44060	4.50650	HepG2	CPSF6
HDGF	ENSG00000143321.14	7273.55550	6097.70640	0.25430	3.64820	2.47880	HepG2	YBX3
HDGF	ENSG00000143321.14	6670.52900	8303.52090	-0.31590	4.81430	4.01000	HepG2	CELF1
HDGF	ENSG00000143321.14	7879.74900	8927.58600	-0.18010	3.12590	2.34540	HepG2	DAZAP1
HDGF	ENSG00000143321.14	6021.81560	5309.02960	0.18170	2.84680	2.00140	HepG2	DDX19B
HDGF	ENSG00000143321.14	3801.31280	5226.24280	-0.45930	4.96340	4.08200	HepG2	DDX21
HDGF	ENSG00000143321.14	4080.54170	5038.83880	-0.30430	3.34170	1.85170	HepG2	DDX52
HDGF	ENSG00000143321.14	4910.64320	7935.81670	-0.69250	4.51280	3.27420	HepG2	DDX59
HDGF	ENSG00000143321.14	5225.02460	6757.92680	-0.37110	3.70440	2.54130	HepG2	DDX5
HDGF	ENSG00000143321.14	5858.58050	7665.31470	-0.38780	3.04740	2.40130	HepG2	DDX6
HDGF	ENSG00000143321.14	4336.22970	5492.05230	-0.34090	7.01020	6.02640	HepG2	DKC1
HDGF	ENSG00000143321.14	4276.98070	5987.38140	-0.48530	9.58970	8.34490	HepG2	DNAJC21
HDGF	ENSG00000143321.14	4780.96890	5934.66990	-0.31190	8.24190	7.19080	HepG2	DNAJC2
HDGF	ENSG00000143321.14	4286.04910	6011.98750	-0.48820	5.67780	4.39330	HepG2	EEF2
HDGF	ENSG00000143321.14	3056.43500	7368.82450	-1.26960	29.87920	28.06540	HepG2	EIF2S1
HDGF	ENSG00000143321.14	5565.00620	7012.06350	-0.33350	3.97500	2.57760	HepG2	EIF2S2
HDGF	ENSG00000143321.14	4633.91410	8143.40350	-0.81340	11.10300	9.85040	HepG2	EIF4A3
HDGF	ENSG00000143321.14	5695.06630	8007.11130	-0.49160	6.36290	4.78420	HepG2	ESF1
HDGF	ENSG00000143321.14	5791.93640	10297.96340	-0.83020	41.75660	39.94050	HepG2	ETF1
HDGF	ENSG00000143321.14	4507.72440	5609.25950	-0.31540	3.48680	2.54620	HepG2	EWSR1
HDGF	ENSG00000143321.14	3665.69630	4361.84020	-0.25080	2.59270	1.46490	HepG2	FAM120A
HDGF	ENSG00000143321.14	7237.88300	9333.11920	-0.36680	2.77620	2.00450	HepG2	FIP1L1
HDGF	ENSG00000143321.14	3471.76680	4491.54680	-0.37150	3.15310	1.80100	HepG2	FKBP4
HDGF	ENSG00000143321.14	5955.95340	7621.88880	-0.35580	2.77180	2.10600	HepG2	G3BP1
HDGF	ENSG00000143321.14	4270.36060	5527.37900	-0.37220	2.97160	1.91540	HepG2	GNB2L1
HDGF	ENSG00000143321.14	3334.16360	7921.64720	-1.24850	27.28810	25.51240	HepG2	GPKOW
HDGF	ENSG00000143321.14	502.72700	5480.38140	-3.44640	99999.99999	99999.99999	HepG2	HDGF
HDGF	ENSG00000143321.14	3421.79950	6044.74390	-0.82090	18.91640	17.47160	HepG2	HNRNPA1
HDGF	ENSG00000143321.14	7196.19490	8205.06310	-0.18930	2.36470	1.49210	HepG2	HNRNPA2B1
HDGF	ENSG00000143321.14	4516.75000	6723.71290	-0.57400	9.45270	8.23490	HepG2	HNRNPC
HDGF	ENSG00000143321.14	7323.07390	8450.18480	-0.20650	3.06530	2.31330	HepG2	HNRNPF
HDGF	ENSG00000143321.14	4491.66110	7559.79200	-0.75110	12.71790	11.49740	HepG2	HNRNPLL
HDGF	ENSG00000143321.14	5276.53210	6439.95410	-0.28750	2.97970	1.99290	HepG2	HNRNPM
HDGF	ENSG00000143321.14	4943.23680	6679.25580	-0.43420	11.91910	10.73470	HepG2	HNRNPU
HDGF	ENSG00000143321.14	6690.24260	8321.02350	-0.31470	4.14870	3.27670	HepG2	IGF2BP1
HDGF	ENSG00000143321.14	4678.05120	7747.47560	-0.72780	10.93930	9.69100	HepG2	IGF2BP2
HDGF	ENSG00000143321.14	5649.69070	6822.62970	-0.27220	7.21800	6.09410	HepG2	ILF2
HDGF	ENSG00000143321.14	5508.66330	8219.26330	-0.57730	6.98530	5.95820	HepG2	MAGOH
HDGF	ENSG00000143321.14	5851.64880	7554.41440	-0.36850	4.62130	3.59610	HepG2	MSI2
HDGF	ENSG00000143321.14	4774.74880	7710.44200	-0.69140	6.04440	4.58500	HepG2	MTPAP
HDGF	ENSG00000143321.14	5519.18370	8459.94630	-0.61620	7.41510	6.40310	HepG2	NCBP2
HDGF	ENSG00000143321.14	7639.67920	8852.61540	-0.21260	2.22450	1.54010	HepG2	NOL12
HDGF	ENSG00000143321.14	3538.56480	4955.39870	-0.48580	2.45360	1.42920	HepG2	NONO
HDGF	ENSG00000143321.14	5579.32420	6703.34640	-0.26480	2.36070	1.66740	HepG2	NSUN2
HDGF	ENSG00000143321.14	5065.95790	7534.10850	-0.57260	6.73160	5.61330	HepG2	PABPC4
HDGF	ENSG00000143321.14	5558.97730	7788.59120	-0.48650	14.75650	13.53700	HepG2	PCBP1
HDGF	ENSG00000143321.14	6566.26730	7708.45200	-0.23140	3.64080	2.76400	HepG2	PRPF4
HDGF	ENSG00000143321.14	3356.24180	4162.57820	-0.31060	2.37480	1.62380	HepG2	PRPF8
HDGF	ENSG00000143321.14	5506.60440	7925.19350	-0.52530	16.34990	15.23390	HepG2	PTBP1
HDGF	ENSG00000143321.14	5207.68990	8450.80040	-0.69840	14.45590	13.23790	HepG2	PUF60
HDGF	ENSG00000143321.14	4874.40370	8964.43530	-0.87900	28.28560	26.30100	HepG2	PUM2
HDGF	ENSG00000143321.14	4690.50940	5847.05560	-0.31800	7.27780	6.35770	HepG2	PUS1
HDGF	ENSG00000143321.14	5753.06530	8583.15740	-0.57720	14.40900	13.14060	HepG2	QKI
HDGF	ENSG00000143321.14	5072.50130	7789.77560	-0.61890	12.45000	11.08260	HepG2	RBM25
HDGF	ENSG00000143321.14	4165.52070	6529.28400	-0.64840	9.50150	7.64100	HepG2	RBM27
HDGF	ENSG00000143321.14	6439.86920	8819.97050	-0.45370	13.09220	12.07480	HepG2	NELFE
HDGF	ENSG00000143321.14	6067.69390	8214.62000	-0.43700	12.51610	11.35010	HepG2	RECQL
HDGF	ENSG00000143321.14	5843.37750	9102.86310	-0.63950	11.60910	10.37770	HepG2	RPLP0
HDGF	ENSG00000143321.14	3995.76670	5620.23470	-0.49220	3.09420	2.09730	HepG2	RPS10
HDGF	ENSG00000143321.14	3713.00430	4748.85710	-0.35500	4.23350	3.48790	HepG2	RPS19
HDGF	ENSG00000143321.14	4248.89300	6021.85700	-0.50310	6.07610	4.91580	HepG2	RPS2
HDGF	ENSG00000143321.14	3567.92370	5108.60740	-0.51780	3.94110	2.98740	HepG2	RPS3A
HDGF	ENSG00000143321.14	4587.36710	6822.41660	-0.57260	4.28110	3.43200	HepG2	SF3A3
HDGF	ENSG00000143321.14	6314.28450	7482.58530	-0.24490	2.06090	1.44650	HepG2	SF3B1
HDGF	ENSG00000143321.14	5625.02050	8251.13010	-0.55270	19.08420	17.75170	HepG2	SF3B4
HDGF	ENSG00000143321.14	5455.72770	8103.49090	-0.57080	26.33790	24.60020	HepG2	SLBP
HDGF	ENSG00000143321.14	5865.69720	6936.48570	-0.24190	5.98450	5.09470	HepG2	SMN1
HDGF	ENSG00000143321.14	6229.74120	8325.72960	-0.41840	2.48350	1.74410	HepG2	SNRNP70
HDGF	ENSG00000143321.14	7332.31520	8612.40130	-0.23210	4.47360	3.90810	HepG2	SRSF1
HDGF	ENSG00000143321.14	6445.69640	8344.22090	-0.37240	8.64380	7.61700	HepG2	SRSF5
HDGF	ENSG00000143321.14	6188.56030	8302.01440	-0.42390	11.25220	10.01220	HepG2	SRSF7
HDGF	ENSG00000143321.14	6145.90120	7006.65400	-0.18910	2.91690	2.35370	HepG2	SRSF9
HDGF	ENSG00000143321.14	4748.15270	8440.18100	-0.82990	43.88100	42.43110	HepG2	SSB
HDGF	ENSG00000143321.14	6986.68820	9489.43270	-0.44170	15.78740	14.49940	HepG2	SUCLG1
HDGF	ENSG00000143321.14	3629.16130	5371.85060	-0.56580	6.16700	5.21740	HepG2	SUPV3L1
HDGF	ENSG00000143321.14	6375.05590	7741.18390	-0.28010	4.30260	3.62710	HepG2	TAF15
HDGF	ENSG00000143321.14	5010.36180	7368.98630	-0.55660	8.28420	7.11850	HepG2	TARDBP
HDGF	ENSG00000143321.14	5418.52470	7113.07030	-0.39260	5.58170	4.40750	HepG2	TIA1
HDGF	ENSG00000143321.14	4661.00850	6489.94680	-0.47760	8.62830	7.83430	HepG2	TIAL1
HDGF	ENSG00000143321.14	6049.25630	8256.46450	-0.44880	6.95200	5.46670	HepG2	TUFM
HDGF	ENSG00000143321.14	5888.55470	7984.33140	-0.43930	4.98050	4.15140	HepG2	U2AF1
HDGF	ENSG00000143321.14	6537.72120	8739.59430	-0.41880	3.78290	2.79660	HepG2	UBE2L3
HDGF	ENSG00000143321.14	3603.86060	4918.80560	-0.44880	3.16070	2.08550	HepG2	UPF2
HDGF	ENSG00000143321.14	4919.12060	6218.94510	-0.33830	6.40060	4.87320	HepG2	UTP18
HDGF	ENSG00000143321.14	7393.79870	5841.45710	0.33990	8.58240	7.62200	HepG2	UTP3
HDGF	ENSG00000143321.14	3743.71360	6291.59540	-0.74900	7.05580	5.43100	HepG2	XRCC6
HDGF	ENSG00000143321.14	5727.19110	7607.39970	-0.40960	11.58800	10.37140	HepG2	ZC3H8
HDGF	ENSG00000143321.14	3868.09200	6654.32330	-0.78270	49.69030	48.11750	HepG2	ZNF622
HDGF	ENSG00000143321.14	17483.01930	21527.28680	-0.30020	2.93130	1.66580	K562	ABCF1
HDGF	ENSG00000143321.14	19724.67710	9943.34220	0.98810	67.07590	64.37070	K562	AGGF1
HDGF	ENSG00000143321.14	15423.52460	10926.38220	0.49720	7.51260	5.68500	K562	AKAP8
HDGF	ENSG00000143321.14	18901.88930	10346.53570	0.86930	9.10100	7.83680	K562	AKAP8L
HDGF	ENSG00000143321.14	17832.46900	14979.00010	0.25150	2.38340	1.83230	K562	AQR
HDGF	ENSG00000143321.14	16176.33480	10856.07740	0.57530	16.06670	13.66510	K562	ATP5C1
HDGF	ENSG00000143321.14	8160.75280	10611.91410	-0.37890	10.67090	8.77630	K562	BCLAF1
HDGF	ENSG00000143321.14	8997.41730	14084.75950	-0.64660	8.45300	6.88230	K562	BOP1
HDGF	ENSG00000143321.14	14350.28490	17610.40100	-0.29530	5.64500	4.01770	K562	CPEB4
HDGF	ENSG00000143321.14	10257.13410	14976.30670	-0.54610	10.95680	9.38130	K562	CPSF6
HDGF	ENSG00000143321.14	7003.37050	8050.71890	-0.20110	2.57860	1.56340	K562	CSTF2
HDGF	ENSG00000143321.14	15010.94350	11666.26510	0.36360	3.93280	2.17520	K562	DDX19B
HDGF	ENSG00000143321.14	16517.74710	11133.37870	0.56900	11.07230	9.08130	K562	DKC1
HDGF	ENSG00000143321.14	6696.56060	8255.25620	-0.30190	2.77050	1.42600	K562	DNAJC21
HDGF	ENSG00000143321.14	6750.40290	7943.70930	-0.23480	3.52860	2.14590	K562	EIF2S1
HDGF	ENSG00000143321.14	8524.95420	14888.17890	-0.80440	33.54800	31.57790	K562	EIF2S2
HDGF	ENSG00000143321.14	8057.86430	6743.43040	0.25680	3.55150	2.65620	K562	EIF3G
HDGF	ENSG00000143321.14	7919.70140	6804.24800	0.21890	2.54870	1.45710	K562	EIF4B
HDGF	ENSG00000143321.14	12234.11280	16452.18530	-0.42740	3.26450	1.47460	K562	ESF1
HDGF	ENSG00000143321.14	8441.67390	6595.27980	0.35600	5.85340	3.83670	K562	EWSR1
HDGF	ENSG00000143321.14	5617.94420	7214.31680	-0.36080	4.57650	2.46990	K562	FASTKD2
HDGF	ENSG00000143321.14	19243.92300	15473.79160	0.31450	3.15010	2.24310	K562	FIP1L1
HDGF	ENSG00000143321.14	6995.47210	9548.15770	-0.44880	4.54100	3.03030	K562	FKBP4
HDGF	ENSG00000143321.14	11173.79150	15237.71510	-0.44750	5.70880	4.47120	K562	FMR1
HDGF	ENSG00000143321.14	8872.61260	12915.19840	-0.54160	6.70260	5.21720	K562	FTO
HDGF	ENSG00000143321.14	9212.53550	7857.50170	0.22940	3.37090	2.71200	K562	FXR1
HDGF	ENSG00000143321.14	10589.25710	8599.06120	0.30030	3.21550	1.64680	K562	G3BP1
HDGF	ENSG00000143321.14	6311.14370	7957.73990	-0.33450	2.06140	1.46380	K562	G3BP2
HDGF	ENSG00000143321.14	6687.54930	9278.48060	-0.47240	4.95270	3.02510	K562	GEMIN5
HDGF	ENSG00000143321.14	10006.45200	14298.82010	-0.51500	8.32130	6.93780	K562	GPKOW
HDGF	ENSG00000143321.14	16820.29400	19839.76440	-0.23820	2.50670	1.78470	K562	GRSF1
HDGF	ENSG00000143321.14	18401.00710	10980.12910	0.74480	8.37760	6.74160	K562	KIF1C
HDGF	ENSG00000143321.14	14588.66770	10510.79180	0.47290	2.33080	1.37190	K562	MAK16
HDGF	ENSG00000143321.14	18605.05190	12300.53630	0.59690	11.39480	9.33850	K562	MBNL1
HDGF	ENSG00000143321.14	10186.22290	13957.18790	-0.45440	5.58260	4.31210	K562	METAP2
HDGF	ENSG00000143321.14	17493.70700	21232.54600	-0.27940	2.58270	1.49360	K562	MSI2
HDGF	ENSG00000143321.14	11901.71530	14429.23300	-0.27780	6.45370	5.26620	K562	MTPAP
HDGF	ENSG00000143321.14	17180.65080	8621.79670	0.99460	10.39460	8.28070	K562	NAA15
HDGF	ENSG00000143321.14	18091.52740	21734.05150	-0.26460	2.53130	1.75170	K562	PUF60
HDGF	ENSG00000143321.14	16596.84270	22650.61830	-0.44860	11.69850	9.72560	K562	PUM2
HDGF	ENSG00000143321.14	26633.55130	10260.65740	1.37600	23.70600	22.12970	K562	PUS1
HDGF	ENSG00000143321.14	21447.49600	9997.68610	1.10100	55.13380	52.36090	K562	RBM15
HDGF	ENSG00000143321.14	7200.21250	9174.21950	-0.34950	2.49220	1.71830	K562	RPS19
HDGF	ENSG00000143321.14	10687.34780	15819.48730	-0.56580	17.76240	15.84540	K562	SF3A3
HDGF	ENSG00000143321.14	10845.30580	8270.93100	0.39080	6.09930	4.79400	K562	SF3B4
HDGF	ENSG00000143321.14	20062.76520	12728.45130	0.65640	3.12650	1.79090	K562	SNRNP200
HDGF	ENSG00000143321.14	14099.75660	16207.35890	-0.20100	4.53840	3.37380	K562	SRPK2
HDGF	ENSG00000143321.14	8829.67410	10335.12880	-0.22710	2.24040	1.31200	K562	SRSF4
HDGF	ENSG00000143321.14	14840.20800	12678.88420	0.22700	2.52700	1.74400	K562	SYNCRIP
HDGF	ENSG00000143321.14	13011.11830	10078.77840	0.36830	4.48410	3.21490	K562	TRIM56
HDGF	ENSG00000143321.14	7166.16190	9229.37950	-0.36500	3.38850	2.25330	K562	UCHL5
HDGF	ENSG00000143321.14	12038.31800	16999.60000	-0.49790	18.77850	17.09180	K562	UPF1
HDGF	ENSG00000143321.14	12916.60210	16200.26580	-0.32680	2.61530	1.44960	K562	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HDGF is not available on ENCORE database.

6 RBPs can affect the splicing of HDGF :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	HDGF	ENSG00000143321.14	chr1	-	156713954	156714161			156713954	156714140	156714292	156714362	0.54000	0.00066	0.03811	longer	K562	SF3B4
A3SS	HDGF	ENSG00000143321.14	chr1	-	156713954	156714161			156713954	156714140	156714292	156714489	0.48800	0.00000	0.00004	longer	K562	AQR
RI	HDGF	ENSG00000143321.14	chr1	-	156714799	156715165			156714799	156714938	156715088	156715165	0.05100	0.00000	0.00000	included	K562	PUS1
RI	HDGF	ENSG00000143321.14	chr1	-	156714799	156715165			156714799	156714938	156715088	156715165	0.05800	0.00000	0.00000	included	HepG2	SF3A3
RI	HDGF	ENSG00000143321.14	chr1	-	156714799	156715165			156714799	156714938	156715088	156715165	0.05700	0.00000	0.00000	included	K562	AKAP8L
RI	HDGF	ENSG00000143321.14	chr1	-	156714799	156715165			156714799	156714938	156715088	156715165	0.07700	0.00000	0.00000	included	K562	AQR
MXE	HDGF	ENSG00000143321.14	chr1	-	156713954	156714140	156714799	156714938	156713443	156713670	156715088	156715165	-0.08100	0.00129	0.02993	2included	K562	SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
HDGF	Product_ID: 42105S Lot_ID: 1 Source: Cell Signaling Technology Target Name: HDGF-human
HDGF	Product_ID: A303-170A Lot_ID: 1 Source: Bethyl Labs Target Name: HDGF-human

HDGF

General Information

Functions

Localization(RBPImage: HDGF)

Domains (AlphaFold: HDGF)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HDGF is not avaliable on ENCORE database.

45 proteins are bound to HDGF RNA:

eCLIP assay for HDGF is not avaliable on ENCORE database.

Diffrential Expression

3,150 differentially expressed genes after Knockdown/Knockout HDGF protein :

127 RBPs can affect the gene expression of HDGF :

The Knockdown/knockout RNA-Seq assay for HDGF is not available on ENCORE database.

6 RBPs can affect the splicing of HDGF :

The Knockdown/knockout RNA-Seq assay for HDGF is not avaliable on ENCORE database.