ZDHHC6

General Information

Gene Name       : ZDHHC6
Gene ID             : ENSG00000023041.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC6ENSG00000023041.1132.1626.9229.54ENCSR000AEF
HepG2ZDHHC6ENSG00000023041.1127.6542.6335.14ENCSR985KAT
K562ZDHHC6ENSG00000023041.1113.2516.1214.69ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC6 RNA is bound by 10 proteins.  







eCLIP assay for ZDHHC6 is not avaliable on ENCORE database.





10 proteins are bound to ZDHHC6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10114206617114206673-5'-UTR,intron-Distal,intron-Proximal4.919956.75419HepG2DDX3X
chr10114206615114206671-5'-UTR,intron-Distal,intron-Proximal4.282474.61711HepG2NCBP2
chr10114206531114206615-5'-UTR,intron-Distal3.544877.61873HepG2NCBP2
chr10114206498114206608-5'-UTR,intron-Distal4.514925.88953K562DDX3X
chr10114190623114190666-CDS,intron-Distal3.788664.51739HepG2BCLAF1
chr10114201843114201973-CDS,intron-Distal,intron-Proximal5.211775.02942K562EFTUD2
chr10114194010114194074-CDS,intron-Distal,intron-Proximal3.748635.13777HepG2PRPF8
chr10114194099114194176-CDS,intron-Distal3.725096.97808HepG2BCLAF1
chr10114192104114192207-CDS,intron-Distal,intron-Proximal5.545465.68502HepG2PRPF8
chr10114198093114198125-CDS,intron-Distal,intron-Proximal4.526884.70478HepG2BCLAF1
chr10114193955114194061-CDS,intron-Distal,intron-Proximal3.811763.88924K562PRPF8
chr10114192164114192248-CDS,intron-Distal3.117363.12941K562UCHL5
chr10114192191114192265-CDS,intron-Distal4.393914.31023HepG2LIN28B
chr10114204813114204879-intron-Distal,intron-Proximal4.294804.51735HepG2QKI
chr10114193769114193876-intron-Distal4.876196.64929HepG2QKI
chr10114203119114203267-intron-Distal,intron-Proximal4.173743.66668K562KHSRP
chr10114193978114194025-intron-Distal,intron-Proximal4.740236.77750HepG2RBM22
chr10114198219114198470-intron-Distal,intron-Proximal3.827803.45805K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC6 is not available on ENCORE database.

  • 69 RBPs can affect the levels of ZDHHC6.  








The Knockdown/knockout RNA-Seq assay for ZDHHC6 is not available on ENCORE database.





69 RBPs can affect the gene expression of ZDHHC6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC6ENSG00000023041.7629.39580451.691900.478503.109201.97730HepG2AATF
ZDHHC6ENSG00000023041.7899.98000603.055900.577503.996503.37440HepG2AKAP1
ZDHHC6ENSG00000023041.7441.56180620.69260-0.491302.687201.80020HepG2BCLAF1
ZDHHC6ENSG00000023041.7529.80380756.02610-0.513004.099603.38720HepG2BOP1
ZDHHC6ENSG00000023041.7464.50920587.25890-0.338302.337401.40420HepG2YBX3
ZDHHC6ENSG00000023041.7651.20690498.914800.384202.000601.41240HepG2DDX21
ZDHHC6ENSG00000023041.7747.26650577.693900.371202.085701.53410HepG2DDX3X
ZDHHC6ENSG00000023041.7361.69180576.69630-0.673105.799804.81540HepG2DNAJC21
ZDHHC6ENSG00000023041.7331.87420527.21980-0.667804.297403.50490HepG2EIF4A3
ZDHHC6ENSG00000023041.71137.31820868.361900.389204.465003.73470HepG2ETF1
ZDHHC6ENSG00000023041.7407.12210307.710600.403802.149801.45000HepG2FUBP3
ZDHHC6ENSG00000023041.7575.38010786.77690-0.451401.979101.43160HepG2GPKOW
ZDHHC6ENSG00000023041.7513.62350644.95850-0.328502.678501.71480HepG2HDGF
ZDHHC6ENSG00000023041.7218.32300647.58740-1.5686023.9016022.09470HepG2HNRNPC
ZDHHC6ENSG00000023041.7572.54030791.51820-0.467204.931504.00880HepG2HNRNPF
ZDHHC6ENSG00000023041.7525.85920892.66360-0.7634014.9129013.46110HepG2HNRNPL
ZDHHC6ENSG00000023041.7520.89110750.83620-0.527503.822203.09270HepG2HNRNPLL
ZDHHC6ENSG00000023041.7438.81990643.30780-0.551906.265805.38370HepG2HNRNPU
ZDHHC6ENSG00000023041.7614.40740779.42390-0.343202.335401.66800HepG2IGF2BP1
ZDHHC6ENSG00000023041.7462.97530617.53860-0.415604.138002.90310HepG2KIF1C
ZDHHC6ENSG00000023041.7639.783401062.99020-0.732506.123304.88150HepG2LARP4
ZDHHC6ENSG00000023041.7811.48320532.087300.608804.866804.00470HepG2MAGOH
ZDHHC6ENSG00000023041.7957.96130535.072000.840108.113507.07950HepG2MATR3
ZDHHC6ENSG00000023041.7936.63850612.790700.612006.682105.47870HepG2MSI2
ZDHHC6ENSG00000023041.7236.75630344.88780-0.542703.426802.05640HepG2PKM
ZDHHC6ENSG00000023041.7605.36050454.239400.414203.622002.74770HepG2PRPF4
ZDHHC6ENSG00000023041.7651.04920537.725900.275801.851001.38610HepG2PTBP1
ZDHHC6ENSG00000023041.7648.28260927.53760-0.516805.040304.26530HepG2PUF60
ZDHHC6ENSG00000023041.7707.59400984.59430-0.476607.538306.65920HepG2PUM1
ZDHHC6ENSG00000023041.7630.17390983.89240-0.642808.394407.25500HepG2PUM2
ZDHHC6ENSG00000023041.7744.53940913.73520-0.295402.265301.47970HepG2RBM15
ZDHHC6ENSG00000023041.7372.14150544.34530-0.548703.087301.96630HepG2RCC2
ZDHHC6ENSG00000023041.7781.45730598.443500.384903.373902.78900HepG2NELFE
ZDHHC6ENSG00000023041.7289.46650405.84510-0.487503.086102.44190HepG2RPS19
ZDHHC6ENSG00000023041.7361.44930572.90880-0.664508.040607.02820HepG2SAFB2
ZDHHC6ENSG00000023041.7557.24510743.17580-0.415402.767002.06060HepG2SF3B1
ZDHHC6ENSG00000023041.7710.58360889.30680-0.323703.458702.68870HepG2SLBP
ZDHHC6ENSG00000023041.7963.46600819.748900.233002.067201.61420HepG2SRFBP1
ZDHHC6ENSG00000023041.7719.37920584.362400.299802.201801.76700HepG2SRSF1
ZDHHC6ENSG00000023041.7567.57090799.67030-0.494602.939801.90380HepG2SRSF3
ZDHHC6ENSG00000023041.7558.44420915.77490-0.7136011.9256010.75130HepG2SRSF5
ZDHHC6ENSG00000023041.7643.94250777.62520-0.272101.928001.33610HepG2SRSF7
ZDHHC6ENSG00000023041.7384.86660475.40520-0.304801.969701.48930HepG2SRSF9
ZDHHC6ENSG00000023041.7974.38750711.731800.453105.832605.14070HepG2SSB
ZDHHC6ENSG00000023041.7417.11940525.23260-0.332502.173101.66520HepG2TAF15
ZDHHC6ENSG00000023041.7551.78170731.85000-0.407502.675301.96110HepG2TARDBP
ZDHHC6ENSG00000023041.7395.98000630.67550-0.671508.667807.75640HepG2TRIM56
ZDHHC6ENSG00000023041.7704.31840906.11950-0.363502.876701.98320HepG2TUFM
ZDHHC6ENSG00000023041.7897.64650647.653900.470803.447402.75160HepG2U2AF1
ZDHHC6ENSG00000023041.7267.30500413.01670-0.627703.895602.99570HepG2UCHL5
ZDHHC6ENSG00000023041.7565.34920701.70920-0.311702.587701.90880HepG2UPF1
ZDHHC6ENSG00000023041.7673.49530448.277500.587206.554505.59280HepG2ZC3H8
ZDHHC6ENSG00000023041.7545.35560771.74630-0.500906.691505.93780HepG2ZNF622
ZDHHC6ENSG00000023041.7245.21880342.23540-0.480902.639702.00060K562AKAP8L
ZDHHC6ENSG00000023041.7829.50560608.317600.447303.383202.00630K562APOBEC3C
ZDHHC6ENSG00000023041.7329.89620500.68210-0.601903.983702.93390K562BOP1
ZDHHC6ENSG00000023041.7453.41590267.019000.763806.203704.78990K562EFTUD2
ZDHHC6ENSG00000023041.7835.28030689.366300.276902.574201.66430K562EIF4G2
ZDHHC6ENSG00000023041.7402.37610218.146700.883108.561807.56810K562FXR1
ZDHHC6ENSG00000023041.7328.17490508.23000-0.631003.671502.76130K562GPKOW
ZDHHC6ENSG00000023041.7163.54260288.17090-0.817304.786704.02190K562HNRNPC
ZDHHC6ENSG00000023041.7188.13500265.84770-0.498802.483101.36920K562IGF2BP3
ZDHHC6ENSG00000023041.7262.05530434.02610-0.727903.981302.84500K562KRR1
ZDHHC6ENSG00000023041.7373.80550496.09900-0.408302.368601.56080K562METAP2
ZDHHC6ENSG00000023041.7187.02970268.51050-0.521702.739501.39600K562PCBP1
ZDHHC6ENSG00000023041.7508.11500244.427801.0556011.524709.44470K562PCBP2
ZDHHC6ENSG00000023041.7347.52810242.128600.521303.095402.24630K562POLR2G
ZDHHC6ENSG00000023041.7435.72800605.78810-0.475403.049402.18210K562PPIG
ZDHHC6ENSG00000023041.7632.56940259.837601.2835016.3255014.48340K562PRPF8
ZDHHC6ENSG00000023041.71137.70880752.179900.596906.415405.17440K562PUF60
ZDHHC6ENSG00000023041.7126.87170235.62720-0.893105.106003.75470K562RCC2
ZDHHC6ENSG00000023041.7303.17230215.778600.490502.420001.41150K562SAFB
ZDHHC6ENSG00000023041.7149.92510247.09090-0.720803.969702.67140K562SRSF5
ZDHHC6ENSG00000023041.7449.45570242.877200.887908.930607.45130K562SYNCRIP
ZDHHC6ENSG00000023041.7179.75400263.90620-0.554002.189401.36270K562TRIM56
ZDHHC6ENSG00000023041.7296.59060207.114200.517902.315701.32680K562U2AF1
ZDHHC6ENSG00000023041.7373.25280213.908900.803106.927905.66460K562U2AF2
ZDHHC6ENSG00000023041.7161.96770266.34020-0.717602.221801.31710K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC6 is not available on ENCORE database.





9 RBPs can affect the splicing of ZDHHC6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC6ENSG00000023041.7chr10-1141932981141933741141929971141930391141940541141942220.209000.000000.00027includedHepG2HNRNPK
SEZDHHC6ENSG00000023041.7chr10-114193298114193374114192997114193039114194054114194222-0.129000.000290.02929excludedHepG2TBRG4
SEZDHHC6ENSG00000023041.7chr10-114191997114192044114190581114190665114192133114192303-0.097000.000570.00759excludedK562AQR
SEZDHHC6ENSG00000023041.7chr10-114194054114194222114192997114193039114198093114198147-0.127000.000320.00467excludedK562AQR
SEZDHHC6ENSG00000023041.7chr10-1141932981141933741141929971141930391141940541141942220.465000.000290.08468includedK562UCHL5
SEZDHHC6ENSG00000023041.7chr10-114193298114193374114192997114193039114194054114194222-0.116000.000020.00453excludedHepG2PCBP2
SEZDHHC6ENSG00000023041.7chr10-1141932981141933741141929971141930391141940541141942220.152000.000770.05497includedHepG2HNRNPL
SEZDHHC6ENSG00000023041.7chr10-114193298114193374114192997114193039114194054114194222-0.073000.004530.09764excludedHepG2SF3A3
SEZDHHC6ENSG00000023041.7chr10-114193298114193396114192997114193039114194054114194222-0.271000.001010.03809excludedK562TARDBP
SEZDHHC6ENSG00000023041.7chr10-1141932981141933741141929971141930391141940541141942220.172000.000090.02082includedHepG2KHSRP
A3SSZDHHC6ENSG00000023041.7chr10-1141921331141923031141921331141922791141929971141930390.118000.001940.01252longerK562AQR
A3SSZDHHC6ENSG00000023041.7chr10-1141941351141943741141941351141942221141980931141981470.066000.000560.00412longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC6 is not avaliable on ENCORE database.