| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr3 | 50192826 | 50192937 | + | 5'-UTR,intron-Distal | 5.40893 | 23.17024 | HepG2 | DDX3X |
| chr3 | 50192554 | 50192657 | + | 5'-UTR,intron-Proximal | 4.26154 | 15.56330 | HepG2 | DDX3X |
| chr3 | 50214140 | 50214194 | + | intron-Proximal | 4.10391 | 9.40935 | HepG2 | SF3B4 |
| chr3 | 50192771 | 50192826 | + | 5'-UTR,intron-Distal | 3.89454 | 8.43072 | HepG2 | DDX3X |
| chr3 | 50192937 | 50192992 | + | 5'-UTR,intron-Distal | 4.14545 | 7.63030 | HepG2 | DDX3X |
| chr3 | 50192676 | 50192740 | + | 5'-UTR,intron-Distal,intron-Proximal | 5.86443 | 7.49422 | HepG2 | DDX3X |
| chr3 | 50226102 | 50226190 | + | 3'-UTR | 3.60405 | 6.83466 | HepG2 | UPF1 |
| chr3 | 50223534 | 50223638 | + | intron-Distal,intron-Proximal | 4.08655 | 6.81262 | HepG2 | RBFOX2 |
| chr3 | 50226280 | 50226351 | + | 3'-UTR | 4.70476 | 5.64948 | HepG2 | UPF1 |
| chr3 | 50223638 | 50223700 | + | intron-Proximal | 3.71541 | 5.55843 | HepG2 | RBFOX2 |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| SEMA3F | ENSG00000001617.7 | 314.99270 | 861.62230 | -1.45170 | 38.06990 | 36.68080 | HepG2 | SSB | |
| SEMA3F | ENSG00000001617.7 | 710.46060 | 302.19830 | 1.23320 | 21.37180 | 20.22440 | HepG2 | TIAL1 | |
| SEMA3F | ENSG00000001617.7 | 889.36600 | 450.82710 | 0.98010 | 20.32480 | 18.83940 | HepG2 | SRSF5 | |
| SEMA3F | ENSG00000001617.7 | 535.12420 | 992.39590 | -0.89100 | 19.31250 | 18.30180 | HepG2 | SRFBP1 | |
| SEMA3F | ENSG00000001617.7 | 1013.52600 | 484.33600 | 1.06520 | 17.70990 | 16.10500 | HepG2 | PUM2 | |
| SEMA3F | ENSG00000001617.7 | 210.40440 | 511.13500 | -1.28050 | 16.10990 | 14.92360 | HepG2 | TAF15 | |
| SEMA3F | ENSG00000001617.7 | 881.00400 | 512.70090 | 0.78090 | 14.56720 | 13.32260 | HepG2 | SUCLG1 | |
| SEMA3F | ENSG00000001617.7 | 679.74980 | 322.88170 | 1.07390 | 14.35200 | 13.09630 | HepG2 | RPS19 | |
| SEMA3F | ENSG00000001617.7 | 599.50410 | 323.01080 | 0.89210 | 14.25380 | 12.97080 | HepG2 | SMN1 | |
| SEMA3F | ENSG00000001617.7 | 219.22940 | 463.71950 | -1.08080 | 13.53360 | 12.35830 | HepG2 | UTP3 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE | SEMA3F | ENSG00000001617.7 | chr3 | + | 50212528 | 50212621 | 50211663 | 50211783 | 50214200 | 50214294 | 0.25800 | 0.00007 | 0.00746 | included | HepG2 | RBM22 | |||
| MXE | SEMA3F | ENSG00000001617.7 | chr3 | + | 50212528 | 50212621 | 50214200 | 50214294 | 50211663 | 50211783 | 50219716 | 50219836 | 0.15800 | 0.00068 | 0.04935 | 1included | HepG2 | SRSF7 | |
| SE | SEMA3F | ENSG00000001617.7 | chr3 | + | 50212528 | 50212621 | 50211663 | 50211783 | 50214200 | 50214294 | 0.35200 | 0.00400 | 0.04437 | included | HepG2 | U2AF2 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".