CRY1

General Information

Gene Name       : CRY1
Gene ID             : ENSG00000008405.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CRY1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CRY1ENSG00000008405.115.143.764.45ENCSR000AEF
HepG2CRY1ENSG00000008405.117.2513.5310.39ENCSR985KAT
K562CRY1ENSG00000008405.1116.0718.1217.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CRY1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CRY1 RNA is bound by 15 proteins.  







eCLIP assay for CRY1 is not avaliable on ENCORE database.





15 proteins are bound to CRY1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12107385503107385611-3'-UTR,intron-Distal3.1478211.67054K562PUM2
chr12107487009107487074-5'-UTR,intron-Distal4.710316.54449K562RBM15
chr12107486721107486774-5'-UTR,CDS,intron-Distal4.305057.36824K562RBM15
chr12107487074107487148-5'-UTR,intron-Distal3.692924.80676K562RBM15
chr12107393599107393679-CDS,intron-Distal,intron-Proximal3.659488.38544K562SF3B4
chr12107393629107393670-CDS,intron-Distal,intron-Proximal5.0080612.73530K562EFTUD2
chr12107393574107393651-CDS,intron-Distal,intron-Proximal3.320416.42627K562U2AF2
chr12107393556107393648-CDS,intron-Distal,intron-Proximal3.442173.54718K562PRPF8
chr12107386619107386710-CDS,intron-Distal,intron-Proximal4.598115.07478HepG2U2AF2
chr12107398883107398913-CDS,intron-Distal,intron-Proximal3.603923.02850K562YBX3
chr12107393336107393422-CDS,intron-Distal4.734314.48994K562RBM15
chr12107393363107393493-CDS,intron-Distal,intron-Proximal4.259284.62931K562SRSF1
chr12107393489107393567-CDS,intron-Distal,intron-Proximal4.457783.45943HepG2BCLAF1
chr12107391780107391825-CDS,intron-Distal3.395613.66187K562ZNF622
chr12107393571107393629-CDS,intron-Distal,intron-Proximal4.3329112.20650K562EFTUD2
chr12107386607107386710-CDS,intron-Distal,intron-Proximal3.911575.02403K562SF3B4
chr12107451999107452084-intron-Distal4.540896.23114K562TARDBP
chr12107475800107475833-intron-Distal4.164773.59909K562EXOSC5
chr12107432059107432207-intron-Distal5.088977.02715K562MATR3
chr12107443816107443922-intron-Distal4.209554.47026K562MATR3
chr12107476791107476824-intron-Distal4.068453.59909K562EXOSC5
chr12107477116107477160-intron-Distal4.706985.44508K562EXOSC5
chr12107440866107440913-intron-Distal4.583025.76606K562EXOSC5
chr12107444510107444659-intron-Distal3.859753.33944K562MATR3
chr12107480660107480786-intron-Distal4.292114.52538HepG2PTBP1
chr12107476168107476210-intron-Distal4.155043.30687K562EXOSC5
chr12107443816107443907-intron-Distal4.029843.74583HepG2PTBP1
chr12107443733107443924-intron-Distal5.1522511.02443K562PTBP1
chr12107477699107477741-intron-Distal4.107845.80877K562EXOSC5
chr12107396002107396113-intron-Distal3.643944.72639K562KHSRP
chr12107477083107477116-intron-Distal4.838505.44508K562EXOSC5
chr12107480653107480771-intron-Distal4.559775.51760K562MATR3
chr12107480653107480786-intron-Distal5.343326.40067K562PTBP1
chr12107432101107432189-intron-Distal5.9042712.01040K562PTBP1
chr12107475683107475761-intron-Distal3.709856.96387K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CRY1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CRY1 is not available on ENCORE database.

  • 85 RBPs can affect the levels of CRY1.  








The Knockdown/knockout RNA-Seq assay for CRY1 is not available on ENCORE database.





85 RBPs can affect the gene expression of CRY1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CRY1ENSG00000008405.7547.59560451.215600.279201.918901.39540HepG2ACO1
CRY1ENSG00000008405.7198.49740348.15760-0.810605.691504.32960HepG2ADAR
CRY1ENSG00000008405.7879.77710516.581500.768006.395405.62420HepG2AKAP1
CRY1ENSG00000008405.7238.49490333.40000-0.483302.145801.35050HepG2BCLAF1
CRY1ENSG00000008405.7244.62580346.57010-0.502602.757901.52570HepG2BUD13
CRY1ENSG00000008405.7350.28310451.18270-0.365202.617301.96630HepG2CKAP4
CRY1ENSG00000008405.7251.67550357.32280-0.505702.571201.90490HepG2CPSF6
CRY1ENSG00000008405.7285.62520417.33980-0.547105.103104.01800HepG2DDX19B
CRY1ENSG00000008405.7211.72280352.98440-0.737403.431702.01160HepG2DDX27
CRY1ENSG00000008405.7733.94260494.853900.568604.126703.37560HepG2DDX3X
CRY1ENSG00000008405.7693.72320425.071000.706605.344504.51190HepG2DDX6
CRY1ENSG00000008405.7209.86340338.13420-0.688104.551603.30820HepG2DHX30
CRY1ENSG00000008405.7290.81910431.70790-0.569904.553303.72190HepG2DKC1
CRY1ENSG00000008405.7228.56410347.47570-0.604305.016004.17840HepG2DNAJC2
CRY1ENSG00000008405.7357.79940261.256600.453602.476001.45340HepG2EIF3G
CRY1ENSG00000008405.7306.90060451.61490-0.557303.028602.36030HepG2EIF4A3
CRY1ENSG00000008405.7673.03800439.693300.614103.509302.73840HepG2EIF4B
CRY1ENSG00000008405.7727.87220467.062900.640004.312803.36890HepG2FIP1L1
CRY1ENSG00000008405.7178.96140357.92500-1.000003.630102.46060HepG2FTO
CRY1ENSG00000008405.7557.34040422.681000.398902.080801.50020HepG2G3BP1
CRY1ENSG00000008405.7166.61980405.06680-1.2816011.145309.92730HepG2GPKOW
CRY1ENSG00000008405.7551.07470430.821300.355102.802901.82010HepG2HDGF
CRY1ENSG00000008405.7224.22210353.94130-0.658604.060303.30020HepG2HNRNPA1
CRY1ENSG00000008405.7381.98480509.43630-0.415402.016001.39700HepG2HNRNPF
CRY1ENSG00000008405.7768.75280427.969500.844908.994607.79090HepG2HNRNPK
CRY1ENSG00000008405.7406.10850537.43850-0.404203.429702.68700HepG2HNRNPL
CRY1ENSG00000008405.7267.24430386.56140-0.532502.767802.13810HepG2HNRNPLL
CRY1ENSG00000008405.7278.65450391.08790-0.489003.553002.87400HepG2HNRNPU
CRY1ENSG00000008405.7338.04160501.65490-0.569504.275603.39230HepG2IGF2BP1
CRY1ENSG00000008405.7336.65110455.79230-0.437102.185601.60100HepG2MAGOH
CRY1ENSG00000008405.7518.98190378.035400.457102.958302.12280HepG2MSI2
CRY1ENSG00000008405.7470.36310585.04140-0.314802.000401.34910HepG2NOL12
CRY1ENSG00000008405.7205.25350342.75080-0.739804.319703.39060HepG2NSUN2
CRY1ENSG00000008405.7580.14590417.823300.473402.818002.09040HepG2PABPC4
CRY1ENSG00000008405.7239.97480326.56200-0.444502.611201.85790HepG2PRPF4
CRY1ENSG00000008405.7481.24250318.998700.593102.868701.62890HepG2PRPF6
CRY1ENSG00000008405.7326.59770558.47720-0.774007.365606.45320HepG2PUF60
CRY1ENSG00000008405.7727.85120592.852900.295902.606502.02720HepG2PUM1
CRY1ENSG00000008405.7736.47530592.417000.313902.170301.57340HepG2PUM2
CRY1ENSG00000008405.7288.06620459.60190-0.674007.062306.15510HepG2PUS1
CRY1ENSG00000008405.7798.94600473.668800.754109.625808.56050HepG2QKI
CRY1ENSG00000008405.7669.10360292.865501.191908.504507.31170HepG2RAVER1
CRY1ENSG00000008405.7352.10050732.14140-1.056109.852208.37820HepG2RPS3A
CRY1ENSG00000008405.7177.82490268.23120-0.593002.884801.92530HepG2SERBP1
CRY1ENSG00000008405.7283.61780382.62730-0.432002.062201.44760HepG2SF3B1
CRY1ENSG00000008405.7589.71520455.344200.373002.698402.11350HepG2SF3B4
CRY1ENSG00000008405.7413.16260535.50220-0.374202.899002.18220HepG2SLBP
CRY1ENSG00000008405.71789.60820832.626701.1038039.3816038.06430HepG2SRFBP1
CRY1ENSG00000008405.7419.66690551.42050-0.393903.009402.35910HepG2SRSF5
CRY1ENSG00000008405.7274.62970722.90670-1.3963031.4375030.13970HepG2SSB
CRY1ENSG00000008405.7748.12800627.112300.254501.959201.41920HepG2SUCLG1
CRY1ENSG00000008405.7608.43200427.187600.510104.509303.81990HepG2TAF15
CRY1ENSG00000008405.7271.43270505.25850-0.896403.984202.71980HepG2TBRG4
CRY1ENSG00000008405.7514.10970392.537800.389102.486501.69140HepG2TIA1
CRY1ENSG00000008405.7141.57960380.02910-1.4245017.1364016.08490HepG2TIAL1
CRY1ENSG00000008405.7349.69700221.846700.656403.917503.01530HepG2UCHL5
CRY1ENSG00000008405.7206.65350343.86730-0.734603.295602.19580HepG2UPF2
CRY1ENSG00000008405.7543.38190362.810900.582605.604204.80030HepG2UTP3
CRY1ENSG00000008405.7523.25360287.912500.861805.315903.55530HepG2XRCC5
CRY1ENSG00000008405.7523.64590322.031400.701304.170802.87720HepG2XRCC6
CRY1ENSG00000008405.7184.99110369.69740-0.998907.340206.17330HepG2XRN2
CRY1ENSG00000008405.7206.41030322.27780-0.642804.859604.01120HepG2ZC3H8
CRY1ENSG00000008405.7570.08380413.298000.463904.705404.04030HepG2ZNF622
CRY1ENSG00000008405.71950.497801387.076400.491706.016205.02870K562AKAP8L
CRY1ENSG00000008405.72663.803001861.008100.517306.243805.42210K562AQR
CRY1ENSG00000008405.71779.338201492.403300.253602.395401.58840K562DKC1
CRY1ENSG00000008405.7805.507301188.69910-0.561405.464004.50360K562EIF2S2
CRY1ENSG00000008405.7798.511101127.34310-0.497503.601602.66860K562EIF4A3
CRY1ENSG00000008405.71017.16200779.233700.384303.207101.75300K562FUS
CRY1ENSG00000008405.7860.944601172.39930-0.445502.918902.29970K562FXR1
CRY1ENSG00000008405.71022.730501584.15060-0.631308.549507.20480K562GRSF1
CRY1ENSG00000008405.71853.050001110.068900.739203.500502.07730K562HNRNPA2B1
CRY1ENSG00000008405.7427.03630881.75270-1.0460015.8308014.48620K562HNRNPC
CRY1ENSG00000008405.7555.45650787.33250-0.503304.299802.84030K562HNRNPF
CRY1ENSG00000008405.71006.957701277.40310-0.343202.493201.73460K562HSPD1
CRY1ENSG00000008405.72082.196101471.928400.500303.004602.14310K562KIF1C
CRY1ENSG00000008405.7979.111401417.46800-0.533804.208303.05110K562MATR3
CRY1ENSG00000008405.71790.594001155.801400.631405.449104.06480K562NAA15
CRY1ENSG00000008405.71763.60610970.848600.861104.637303.26440K562PABPN1
CRY1ENSG00000008405.7572.52970790.56310-0.465503.305202.30470K562PSIP1
CRY1ENSG00000008405.7996.514201379.79690-0.469503.586702.84170K562PTBP1
CRY1ENSG00000008405.72629.317601375.382400.934806.543305.74890K562PUS1
CRY1ENSG00000008405.71884.398301340.282600.491504.519703.78030K562RBM15
CRY1ENSG00000008405.7543.44160721.18750-0.408202.186901.30970K562RCC2
CRY1ENSG00000008405.71662.22900887.780900.904704.100302.55760K562SF1
CRY1ENSG00000008405.7686.47830867.70130-0.338002.339801.38430K562SRSF4
CRY1ENSG00000008405.7477.46110760.40150-0.671405.690104.30150K562TIAL1
CRY1ENSG00000008405.7638.47150807.71780-0.339202.212001.37980K562TRIM56
CRY1ENSG00000008405.71457.976801076.102800.438103.228202.02830K562U2AF1
CRY1ENSG00000008405.71388.051601111.246600.320803.028102.18780K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CRY1 is not available on ENCORE database.





5 RBPs can affect the splicing of CRY1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCRY1ENSG00000008405.7chr12-1073950571073952251073950571073951461073955411073957260.093000.000000.00000longerK562AQR
A3SSCRY1ENSG00000008405.7chr12-107386564107386668107386564107386640107386742107386814-0.149000.000340.08181shorterHepG2FTO
A5SSCRY1ENSG00000008405.7chr12-107398883107399026107398918107399026107395541107395726-0.118000.000000.00012shorterK562PUS1
A5SSCRY1ENSG00000008405.7chr12-107398883107399026107398918107399026107395541107395726-0.096000.000050.00864shorterK562UTP18
A5SSCRY1ENSG00000008405.7chr12-107398883107399026107398918107399026107395541107395726-0.091000.000530.05082shorterK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CRY1 is not avaliable on ENCORE database.