ATP6V0A1

General Information

Gene Name : ATP6V0A1
Gene ID : ENSG00000033627.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ATP6V0A1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ATP6V0A1	ENSG00000033627.16	39.85	29.30	34.58	ENCSR000AEF
HepG2	ATP6V0A1	ENSG00000033627.16	26.08	25.63	25.85	ENCSR985KAT
K562	ATP6V0A1	ENSG00000033627.16	103.52	106.04	104.78	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ATP6V0A1 is not avaliable on ENCORE database.

Proteins bound to RNA

ATP6V0A1 RNA is bound by 40 proteins.

CanvasJS.com

eCLIP assay for ATP6V0A1 is not avaliable on ENCORE database.

40 proteins are bound to ATP6V0A1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	40632770	40632804	+	intron-Distal,intron-Proximal	6.71275	40.77758	K562	AQR
chr17	40673254	40673421	+	3'-UTR	4.34948	39.86496	HepG2	UPF1
chr17	40632804	40632809	+	intron-Distal,intron-Proximal	6.54707	38.04753	K562	AQR
chr17	40632766	40632770	+	CDS,intron-Distal,intron-Proximal	5.16792	33.21848	K562	AQR
chr17	40674292	40674422	+	3'-UTR	4.30955	32.03991	K562	UPF1
chr17	40666003	40666084	+	intron-Proximal	5.36955	31.97360	K562	AQR
chr17	40666271	40666334	+	CDS,intron-Distal,intron-Proximal	6.97884	25.56549	K562	AQR
chr17	40674292	40674346	+	3'-UTR	5.59395	24.77308	HepG2	UPF1
chr17	40659675	40659721	+	CDS,intron-Proximal	5.23393	22.40147	HepG2	RBM22
chr17	40630541	40630636	+	CDS,intron-Distal,intron-Proximal	3.79148	20.80571	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 156 entries

eCLIP assay for ATP6V0A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ATP6V0A1 is not available on ENCORE database.
120 RBPs can affect the levels of ATP6V0A1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ATP6V0A1 is not available on ENCORE database.

120 RBPs can affect the gene expression of ATP6V0A1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ATP6V0A1	ENSG00000033627.10	3627.13020	1979.78490	0.87340	38.76850	37.46020	HepG2	SRFBP1
ATP6V0A1	ENSG00000033627.10	3459.07930	2004.88780	0.78680	38.16390	36.74160	HepG2	ZNF622
ATP6V0A1	ENSG00000033627.10	5683.46430	2596.43300	1.13010	36.65170	34.56060	K562	HNRNPC
ATP6V0A1	ENSG00000033627.10	3898.02390	1466.16190	1.41060	28.56100	26.54200	HepG2	EIF4A3
ATP6V0A1	ENSG00000033627.10	3174.30740	1326.82250	1.25840	26.11850	24.42750	HepG2	EIF2S1
ATP6V0A1	ENSG00000033627.10	2974.88400	4834.18770	-0.70040	26.00810	24.38200	K562	AGGF1
ATP6V0A1	ENSG00000033627.10	2232.94300	1382.90770	0.69110	22.55100	21.05980	HepG2	CKAP4
ATP6V0A1	ENSG00000033627.10	2765.56260	1570.66570	0.81610	20.94760	19.45990	HepG2	QKI
ATP6V0A1	ENSG00000033627.10	2775.18670	1759.98090	0.65690	19.92760	18.53990	HepG2	UTP3
ATP6V0A1	ENSG00000033627.10	2430.38790	1241.24880	0.96930	19.75250	18.06330	HepG2	HNRNPC
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 139 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ATP6V0A1 is not available on ENCORE database.

23 RBPs can affect the splicing of ATP6V0A1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40659537	40659645			40653214	40653322	40665878	40665996	-0.09100	0.00000	0.00001	excluded	K562	AKAP8L
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40630944	40631067			40630480	40630607	40632684	40632735	0.13800	0.00000	0.00115	included	K562	XRCC6
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40647051	40647206			40646351	40646491	40647643	40647734	0.15600	0.00000	0.00629	included	HepG2	SUGP2
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40647051	40647206			40646351	40646491	40647643	40647734	-0.13300	0.00000	0.00012	excluded	K562	U2AF1
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40647051	40647206			40646351	40646491	40647643	40647734	-0.13700	0.00000	0.00001	excluded	K562	U2AF2
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40630944	40631067			40630480	40630607	40632684	40632735	0.40800	0.00000	0.00000	included	K562	HNRNPC
A3SS	ATP6V0A1	ENSG00000033627.10	chr17	+	40629656	40629760			40629677	40629760	40622107	40622236	0.35200	0.00000	0.00039	longer	K562	PTBP1
MXE	ATP6V0A1	ENSG00000033627.10	chr17	+	40659537	40659645	40665878	40665996	40653214	40653322	40673044	40673462	-0.14200	0.00000	0.00016	2included	K562	EFTUD2
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40647051	40647206			40646351	40646491	40650941	40651060	-0.28800	0.00001	0.00060	excluded	HepG2	SRSF1
SE	ATP6V0A1	ENSG00000033627.10	chr17	+	40630944	40631067			40630480	40630607	40632684	40632735	0.14000	0.00001	0.00043	included	K562	RBM15

Showing 1 to 10 of 44 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ATP6V0A1

General Information

Functions

Localization

Domains (AlphaFold: ATP6V0A1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ATP6V0A1 is not avaliable on ENCORE database.

40 proteins are bound to ATP6V0A1 RNA:

eCLIP assay for ATP6V0A1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ATP6V0A1 is not available on ENCORE database.

120 RBPs can affect the gene expression of ATP6V0A1 :

The Knockdown/knockout RNA-Seq assay for ATP6V0A1 is not available on ENCORE database.

23 RBPs can affect the splicing of ATP6V0A1 :

The Knockdown/knockout RNA-Seq assay for ATP6V0A1 is not avaliable on ENCORE database.