TROVE2

General Information

Gene Name       : TROVE2
Gene ID             : ENSG00000116747.12
Essential Gene : No

Functions

Localization(RBPImage: TROVE2)

Domains (AlphaFold: TROVE2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TROVE2ENSG00000116747.1216.6514.7615.70ENCSR000AEF
HepG2TROVE2ENSG00000116747.127.748.968.35ENCSR985KAT
K562TROVE2ENSG00000116747.1220.5716.7218.64ENCSR000AEO

Assays

5 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 447ENCSR539ZTSTROVE2K562ReleasedENCAB703EAUENCSR687GJH  
eCLIPeCLIP: 503ENCSR993FMYTROVE2HepG2ReleasedENCAB703EAUENCSR619LRH  
knockdown followed by RNA-seq TROVE2-BGKLV19-K562ENCSR060KRDTROVE2K562ReleasedENCSR092WKG   shRNAKD% = 82.7,87.4
knockdown followed by RNA-seq TROVE2-BGHLV16-HepG2ENCSR946OFNTROVE2HepG2ReleasedENCSR689PHN   shRNAKD% = 57.7,50.8
RNA Bind-n-SeqRBNS: TROVE2ENCSR653ZTYTROVE2cell-free sampleReleasedENCSR989YKV  






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
TROVE2447K562ENCSR539ZTSENCSR687GJHENCAB703EAUA303-692A1ReleasedENCODE3
TROVE2503HepG2ENCSR993FMYENCSR619LRHENCAB703EAUA303-692A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
TROVE2ENCAB703EAUA303-692A1Released, ENCODE3Released, ENCODE3BGHLV16-61, Released, ENCODE3BGKLV19-57, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TROVE2K562shRNAENCSR060KRDENCSR092WKGTROVE2_BGKLV19-57B_rpt,TROVE2_BGKLV19-58B_rptNT_BGKLV19-1B_repeat,NT_BGKLV19-2B_repeat82.7,87.4ReleasedENCODE3
TROVE2HepG2shRNAENCSR946OFNENCSR689PHNTROVE2_BGHLV16_61,TROVE2_BGHLV16_62NT_BGHLV16_1,NT_BGHLV16_257.7,50.8ReleasedENCODE3


  RNA Bind-n-Seqn  
  GeneName    gene_aliases    Status    Project    Note  
TROVE2TROVE2ReleasedENCODE4


  Localization Image in HepG2  
    TROVE2: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Cytoplasm
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    TROVE2Product_ID: A303-692A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: TROVE2-human    		 HepG2_Bethyl_A303-692A_1_TROVE2.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using TROVE2 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-TROVE2 antibody (lanes under 'TROVE2').
    		 TROVE2_Secondary_Western.png<br>Caption: Western blot following shRNA against TROVE2 in K562 and HepG2 whole cell lysate using TROVE2 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against TROVE2. Lanes 5-7 follow the same pattern, but in HepG2. TROVE2 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_Bethyl_A303-692A_1_TROVE2.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using TROVE2 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-Ro60 antibody (lanes under 'TROVE2').
    		 TROVE2_Secondary_Western.png<br>Caption: Western blot following shRNA against TROVE2 in K562 and HepG2 whole cell lysate using TROVE2 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 2 and 3 are two different shRNAs against TROVE2. Lanes 5-7 follow the same pattern, but in HepG2. TROVE2 protein appears as the green band, GAPDH serves as a control and appears in red.








    RNA Targets
    • TROVE2 protein binds to 412 RNA regions.  




    • The binding motifs of TROVE2

      • Trulli

    Proteins bound to RNA
    • TROVE2 RNA is bound by 18 proteins.  






    TROVE2 protein has 412 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 412 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    TROVE2chr124284857442848628+7.63135400.00000K562PPHLN1intron-Distal
    TROVE2chr11118916138118916180-3.066834.58822HepG2HYOU13'-UTR,intron-Distal
    TROVE2chr146456661564566638-5.757737.05404K562ESR2intron-Distal
    TROVE2chr117511180675111830+4.92133400.00000K562RPS35'-UTR,CDS,intron-Distal,intron-Proximal
    TROVE2chr4152024172152024184+3.4816018.42490K562RPS3A3'-UTR,CDS
    TROVE2chr28559476385594809+7.1276521.13329K562ELMOD3intron-Distal
    TROVE2chr91937884519378859-5.6282451.24886HepG2RPS63'-UTR,CDS,intron-Distal
    TROVE2chr99503216595032204-3.4853512.27352K562IARS5'-UTR,CDS,intron-Distal,intron-Proximal
    TROVE2chr7103151385103151413-4.3230518.23923HepG2RELNCDS,intron-Distal
    TROVE2chr174322593143225985+3.007663.62619HepG2HEXIM15'-UTR
    TROVE2chr168152647681526525+3.422053.99710HepG2CMIPintron-Distal
    TROVE2chr185606611656066176+3.286425.15405HepG2NEDD4L3'-UTR
    TROVE2chr174846350648463542-6.6680783.79439K562LRRC59intron-Distal
    TROVE2chr12120600728120600759-3.3507112.19562K562GCN1L1CDS,intron-Distal
    TROVE2chr32331536323315403+6.8624630.44827K562UBE2E2intron-Distal
    TROVE2chr762148576214874-7.94659400.00000K562CYTH3intron-Distal
    TROVE2chr67422795774227968-5.81754400.00000HepG2EEF1A1CDS,intron-Distal
    TROVE2chr12123252704123252730+3.644175.29248K562DENRintron-Distal
    TROVE2chr173839953238399569+7.8992362.04865K562WIPF2intron-Distal
    TROVE2chr10128609364128609410+4.3780216.18886HepG2DOCK1intron-Distal
    TROVE2chr3169962629169962643+7.50751102.68433K562PRKCIintron-Distal
    TROVE2chr98092345080923476+5.9436211.96775K562PSAT1CDS
    TROVE2chr134966958649669634+6.00617400.00000K562FNDC3Aintron-Distal
    TROVE2chr67422795774227964-4.53140400.00000K562EEF1A1CDS,intron-Distal
    TROVE2chr91937889619378903-4.88894400.00000K562RPS63'-UTR,CDS,intron-Distal
    TROVE2chr3169962598169962611+5.032839.98650K562PRKCIintron-Distal
    TROVE2chr12120600873120600911-3.506064.93835K562GCN1L1CDS,intron-Distal,intron-Proximal
    TROVE2chr98092347680923495+7.4753812.95838K562PSAT1CDS
    TROVE2chr63478928134789322+5.500206.58123HepG2UHRF1BP1intron-Distal
    TROVE2chr10128609378128609414+4.5192645.68683K562DOCK1intron-Distal
    TROVE2chr13100215358100215440+3.2039011.11502K562TM9SF23'-UTR
    TROVE2chr2132241778132241791-5.246037.41581HepG2MZT2ACDS,intron-Distal
    TROVE2chr10128256372128256388-4.677054.91669K562C10orf90intron-Distal
    TROVE2chr91937948419379486-3.9008612.46642HepG2RPS6CDS,intron-Distal,intron-Proximal
    TROVE2chr63337751633377625+3.082425.74664K562KIFC13'-UTR
    TROVE2chr8101197390101197473+4.114673.04630K562SPAG1intron-Distal
    TROVE2chr752710385271120+3.030873.25603K562WIPI23'-UTR
    TROVE2chr8100540120100540157+4.965254.49449K562VPS13Bintron-Distal
    TROVE2chr194084496040844989-4.998814.49449K562C19orf47intron-Distal
    TROVE2chr65338344053383467-4.452255.01126K562GCLCintron-Distal
    TROVE2chr173854747738547519-4.864379.98748K562TOP2Aintron-Distal
    TROVE2chr14713093047130938-6.5776717.27574K562EFCAB14, ATPAF15'-UTR,CDS,intron-Distal
    TROVE2chr116406353264063553+7.2701971.46718K562KCNK4, RP11-783K16.10intron-Distal
    TROVE2chrX153662704153662737+3.847857.14377HepG2ATP6AP13'-UTR,CDS
    TROVE2chr1195959729596009+3.883505.01126K562WEE1CDS
    TROVE2chr67422796874227984-6.21723400.00000HepG2EEF1A1CDS,intron-Distal,intron-Proximal
    TROVE2chr9116971764116971788+3.833056.45544HepG2COL27A1intron-Distal
    TROVE2chr195283515452835181-5.083774.48682K562CTD-2525I3.6intron-Distal
    TROVE2chr4140265421140265429+4.2662712.51752K562NAA15CDS
    TROVE2chr183158173331581765-5.505614.91669K562NOL4intron-Distal
    TROVE2chr4152024146152024172+4.0200143.17048K562RPS3A3'-UTR,CDS
    TROVE2chr165759172257591746+5.222547.73872K562GPR114intron-Distal
    TROVE2chr124558122445581261-5.260495.92183HepG2PLEKHA8P1intron-Distal
    TROVE2chr214628608246286145-3.487803.40254K562PTTG1IPintron-Distal
    TROVE2chr116406356764063584+7.01662400.00000K562RP11-783K16.10, KCNK4intron-Distal
    TROVE2chr172667868726678706-3.476615.35822K562POLDIP2CDS,intron-Distal,intron-Proximal
    TROVE2chr3131221573131221618-3.771499.49061K562MRPL3CDS,intron-Distal
    TROVE2chr722790522279092-4.610014.07467K562FTSJ2CDS,intron-Distal,intron-Proximal
    TROVE2chr156969885069698898+4.022994.21315K562PAQR53'-UTR
    TROVE2chr79992841099928441-6.5414314.03226HepG2PMS2P1intron-Distal
    TROVE2chr6167411614167411704-3.354584.25588HepG2RP1-167A14.2intron-Distal
    TROVE2chr139200333792003349+3.833733.40254K562MIR17HGintron-Distal
    TROVE2chr203574993735749972-5.202223.65761K562MROH8intron-Distal
    TROVE2chr222220122622201269-4.367293.65761K562MAPK1intron-Distal
    TROVE2chr145005895450058974-5.1918423.57899K562RPS29intron-Distal
    TROVE2chr195577380855773877-4.137586.34623K562HSPBP13'-UTR,intron-Distal,intron-Proximal
    TROVE2chrX6490538464905413+5.7275310.83497K562MSNintron-Distal
    TROVE2chr213812007938120106+3.856813.79118HepG2SIM2CDS
    TROVE2chr10128256368128256372-4.677054.91669K562C10orf90intron-Distal
    TROVE2chr12817698028177042+3.365834.11185K562PPP1R83'-UTR,intron-Distal,intron-Proximal
    TROVE2chr155217681352176851+5.6220736.97753HepG2TMOD3intron-Distal
    TROVE2chr67422807974228083-6.25021400.00000HepG2EEF1A1CDS,intron-Distal,intron-Proximal
    TROVE2chr1771276387127684+3.614678.73513K562ACADVL3'-UTR,CDS,intron-Proximal
    TROVE2chr56401831164018331-4.428727.14198K562SREK1IP13'-UTR,intron-Distal
    TROVE2chr1113460534113460560-5.004297.87140HepG2SLC16A1CDS,intron-Distal,intron-Proximal
    TROVE2chr117778097877781064-3.388834.40634K562NDUFC2-KCTD14, NDUFC23'-UTR,CDS,intron-Distal
    TROVE2chr117511183975111851+4.8664358.43533K562RPS35'-UTR,CDS,intron-Distal,intron-Proximal
    TROVE2chrX6490578264905800+6.4221232.28230K562MSNintron-Distal
    TROVE2chr167527614075276242-3.231045.43213HepG2BCAR1intron-Distal
    TROVE2chr7103075448103075468-6.8922514.99835HepG2SLC26A5intron-Distal
    TROVE2chr9139760653139760730-3.5173122.50834K562EDF15'-UTR,CDS,intron-Distal,intron-Proximal
    TROVE2chr11107955730107955745+6.53581400.00000K562CUL5intron-Distal
    TROVE2chr168926644889266499-3.056787.26881HepG2SLC22A31intron-Distal
    TROVE2chr4152024128152024146+4.0684942.06014K562RPS3A3'-UTR,CDS
    TROVE2chr122110532211105+4.356813.22185HepG2SKIintron-Distal
    TROVE2chr123165923631659284-5.3672916.70354K562DENND5Bintron-Distal
    TROVE2chr3193373570193373577+3.151778.15049HepG2OPA1intron-Distal
    TROVE2chr1236175218236175252-3.646329.39682HepG2NID1CDS,intron-Distal,intron-Proximal
    TROVE2chr174563483745634881+3.716506.12433K562NPEPPSintron-Distal
    TROVE2chr122526074825260795+5.333734.94552K562LRMP3'-UTR,CDS,intron-Proximal
    TROVE2chrX6490537564905384+6.7275311.84464K562MSNintron-Distal
    TROVE2chr1949292954929364+4.061573.12971K562UHRF1intron-Distal
    TROVE2chr117020006470200071-6.544016.15474HepG2AP000487.6intron-Distal
    TROVE2chr175775686557756881+3.402615.59850K562CLTCCDS,intron-Distal,intron-Proximal
    TROVE2chr91937886619378883-6.77518400.00000K562RPS63'-UTR,CDS,intron-Distal
    TROVE2chr1233807493233807500+6.1855410.57524K562KCNK13'-UTR
    TROVE2chr10128609362128609373+7.3489040.64100K562DOCK1intron-Distal
    TROVE2chr172667779326677819-4.022994.68542K562POLDIP2CDS,intron-Distal,intron-Proximal
    TROVE2chr91938020019380229-3.082536.26328HepG2RPS65'-UTR,intron-Distal,intron-Proximal
    TROVE2chrX118603882118603901+5.76087400.00000K562SLC25A5CDS




    18 proteins are bound to TROVE2 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr1193054324193054425+3'-UTR,intron-Distal3.412733.00929K562LIN28B
    chr1193058031193058110+3'-UTR,intron-Distal4.094848.65685K562TIA1
    chr1193058259193058323+3'-UTR,intron-Distal3.0892112.19174K562FAM120A
    chr1193056221193056280+3'-UTR,intron-Distal3.5327930.35209K562PUM2
    chr1193054096193054191+3'-UTR,CDS,intron-Distal,intron-Proximal4.4608723.93287K562PUM2
    chr1193055292193055364+3'-UTR,intron-Distal3.2845313.02585K562FAM120A
    chr1193057318193057333+3'-UTR,intron-Distal5.0222724.75809K562FAM120A
    chr1193060033193060095+3'-UTR,intron-Distal4.292144.65489K562IGF2BP1
    chr1193058041193058107+3'-UTR,intron-Distal4.2120812.03933K562FAM120A
    chr1193054720193054792+3'-UTR,intron-Distal3.472894.41952K562IGF2BP1
    chr1193054854193054892+3'-UTR,intron-Distal3.351563.31456K562TIA1
    chr1193054862193054966+3'-UTR,intron-Distal3.304605.90347K562IGF2BP1
    chr1193059554193059610+3'-UTR,intron-Distal3.254417.43928K562YBX3
    chr1193054711193054746+3'-UTR,intron-Distal3.2608010.47129K562PUM2
    chr1193054290193054335+3'-UTR,intron-Distal3.255664.31744K562YBX3
    chr1193060757193060847+3'-UTR,CDS,intron-Proximal4.255309.86249K562IGF2BP1
    chr1193058000193058073+3'-UTR,intron-Distal5.269587.79427HepG2PTBP1
    chr1193055371193055417+3'-UTR,intron-Distal4.2540817.34284K562PUM2
    chr1193058951193058967+3'-UTR,intron-Distal3.714109.14684K562FAM120A
    chr1193057333193057368+3'-UTR,intron-Distal3.6470424.18716K562FAM120A
    chr1193057316193057334+3'-UTR,intron-Distal4.629556.32738K562HNRNPC
    chr1193038178193038324+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.855089.36623K562DDX3X
    chr1193055325193055371+3'-UTR,intron-Distal3.6696326.76815K562PUM2
    chr1193055267193055325+3'-UTR,intron-Distal3.9150331.62764K562PUM2
    chr1193056496193056551+3'-UTR,intron-Distal3.8628715.89839K562PUM2
    chr1193057988193058074+3'-UTR,intron-Distal3.8880612.82321K562PTBP1
    chr1193060316193060368+3'-UTR,intron-Distal3.874693.31904K562IGF2BP1
    chr1193060805193060856+3'-UTR,CDS3.5238311.96701K562PUM2
    chr1193060187193060257+3'-UTR,intron-Distal4.067314.34615K562LIN28B
    chr1193058863193058916+3'-UTR,intron-Distal3.3448911.29679K562FAM120A
    chr1193057334193057367+3'-UTR,intron-Distal3.272625.80388K562HNRNPC
    chr1193028743193028869+5'-UTR3.331575.68816K562FXR2
    chr1193028749193028830+5'-UTR3.454906.11569K562FMR1
    chr1193028762193028831+5'-UTR3.614456.75993K562DDX3X
    chr1193038600193038673+5'-UTR,CDS,intron-Distal3.817606.11658K562FXR2
    chr1193028837193028911+5'-UTR,intron-Proximal4.086235.65659HepG2DDX3X
    chr1193028882193028907+5'-UTR,intron-Proximal3.717647.89340K562DDX3X
    chr1193028805193028884+5'-UTR4.507675.98323K562DROSHA
    chr1193038338193038468+5'-UTR,CDS,intron-Distal,intron-Proximal3.913636.81385HepG2BCLAF1
    chr1193028868193028956+5'-UTR,intron-Proximal4.066475.34978HepG2PRPF8
    chr1193028831193028882+5'-UTR4.3333321.99127K562DDX3X
    chr1193051760193051823+CDS4.892884.41602K562FXR2
    chr1193047236193047348+intron-Distal3.817733.27714HepG2HNRNPL
    chr1193035532193035762+intron-Distal3.826013.89405HepG2PTBP1
    chr1193034902193035026+intron-Distal3.220783.81193HepG2QKI
    chr1193035042193035160+intron-Distal4.164684.21977HepG2HNRNPL
    chr1193032497193032573+intron-Distal3.327803.28806K562KHSRP
    chr1193060608193060761+intron-Distal,intron-Proximal4.3532924.42677K562QKI
    chr1193035560193035667+intron-Distal5.232127.41017K562PTBP1
    chr1193044807193044898+intron-Distal,intron-Proximal4.696567.61259K562KHSRP
    chr1193060611193060710+intron-Distal,intron-Proximal3.5052414.96714K562PUM2
    chr1193060634193060696+intron-Distal,intron-Proximal4.266823.97054K562IGF2BP1
    chr1193035707193035787+intron-Distal4.983375.81225K562PTBP1
    chr1193028937193028997+intron-Proximal3.272934.16947HepG2RBM22
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein TROVE2 and its RNA.



    Diffrential Expression
    • 2,115 differentially expressed genes after Knockdown/Knockout TROVE2 protein.  





    • 94 RBPs can affect the levels of TROVE2.  







    2,115 differentially expressed genes after Knockdown/Knockout TROVE2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 2,115 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    CYP51A1ENSG00000001630.111156.940102053.45720-0.827705.064102.96460HepG2TROVE2
    SLC7A2ENSG00000003989.122060.633303554.53740-0.786606.966204.64320HepG2TROVE2
    ASB4ENSG00000005981.8116.8903055.050401.086204.072002.18530HepG2TROVE2
    LUC7LENSG00000007392.12511.00760730.06690-0.514703.150801.48130HepG2TROVE2
    E2F2ENSG00000007968.6211.14760124.201300.765503.490101.72980HepG2TROVE2
    SPAG9ENSG00000008294.161307.145001982.96780-0.601204.678602.65040HepG2TROVE2
    CLCN6ENSG00000011021.17703.99090982.26550-0.480603.082901.43570HepG2TROVE2
    MBTD1ENSG00000011258.11590.80420835.22680-0.499503.139301.47430HepG2TROVE2
    MVPENSG00000013364.14730.16610435.423200.745705.978403.76870HepG2TROVE2
    RNASET2ENSG00000026297.111444.580102070.57710-0.519404.075602.18580HepG2TROVE2
    UHRF1ENSG00000034063.9819.95500575.975800.509403.220501.52290HepG2TROVE2
    TMSB10ENSG00000034510.43589.412302541.426300.498003.051601.41680HepG2TROVE2
    TIMP2ENSG00000035862.81052.20690750.605000.487203.232801.53220HepG2TROVE2
    PHKA2ENSG00000044446.71366.053602283.71180-0.741407.742105.33650HepG2TROVE2
    USP28ENSG00000048028.7275.34260466.73710-0.761405.158603.04390HepG2TROVE2
    KITLGENSG00000049130.9182.7864082.464001.148203.264301.55570HepG2TROVE2
    MSMO1ENSG00000052802.81306.983302175.95890-0.735404.909602.84610HepG2TROVE2
    ITIH1ENSG00000055957.6135.83010227.51440-0.744203.515801.75100HepG2TROVE2
    SLC2A3ENSG00000059804.115832.8970010094.59220-0.791309.884507.24340HepG2TROVE2
    BCAT1ENSG00000060982.10791.51830526.534900.588004.173602.26170HepG2TROVE2
    SPAG4ENSG00000061656.5257.52270441.06970-0.776303.213601.52000HepG2TROVE2
    NGFRENSG00000064300.4204.6441068.573701.577303.491501.72980HepG2TROVE2
    CTSAENSG00000064601.123470.736502493.685000.476903.789601.96420HepG2TROVE2
    ABCA7ENSG00000064687.8357.32540584.50240-0.710003.681301.88660HepG2TROVE2
    ADAT1ENSG00000065457.6205.31170116.531100.817003.735901.92350HepG2TROVE2
    MTHFD2ENSG00000065911.72065.575401056.915700.9666012.234409.35670HepG2TROVE2
    KDM4AENSG00000066135.8451.45330300.031300.589403.382601.64110HepG2TROVE2
    DDX3YENSG00000067048.121677.552402492.18700-0.571104.582202.57260HepG2TROVE2
    TRAM1ENSG00000067167.31651.915502319.67080-0.489803.715801.91270HepG2TROVE2
    KCNAB2ENSG00000069424.10357.65900220.644700.696803.935702.07290HepG2TROVE2
    RORAENSG00000069667.11475.23830765.56760-0.687905.289503.15630HepG2TROVE2
    TGFBR3ENSG00000069702.63233.499005190.55260-0.682807.302104.94170HepG2TROVE2
    JMJD6ENSG00000070495.10296.97410487.82260-0.716004.852802.80060HepG2TROVE2
    ASNSENSG00000070669.12713.32620207.869701.7788020.0495016.82350HepG2TROVE2
    SLC12A3ENSG00000070915.55.9436032.89250-2.468404.505202.51130HepG2TROVE2
    TFRCENSG00000072274.84645.871407210.40460-0.634104.740602.69280HepG2TROVE2
    P4HA2ENSG00000072682.14982.735701374.18650-0.483703.415101.66950HepG2TROVE2
    SCARB1ENSG00000073060.113036.360304213.60360-0.472703.796601.96980HepG2TROVE2
    GSDMBENSG00000073605.14269.88350417.00180-0.627703.621701.83430HepG2TROVE2
    LMAN1ENSG00000074695.54153.837205531.29240-0.413203.014301.38770HepG2TROVE2
    ENO1ENSG00000074800.926338.3620034956.27310-0.408403.162501.48740HepG2TROVE2
    WDR62ENSG00000075702.12349.92800227.268600.622603.184001.50430HepG2TROVE2
    MKRN2ENSG00000075975.11266.77170394.33190-0.563802.953401.33430HepG2TROVE2
    PIAS2ENSG00000078043.11223.81010408.01910-0.866406.082703.84960HepG2TROVE2
    C12orf5ENSG00000078237.4122.5647063.701700.944003.339801.61470HepG2TROVE2
    TP53INP2ENSG00000078804.81131.110101626.20090-0.523803.974702.10750HepG2TROVE2
    TNS1ENSG00000079308.12650.326502814.94170-2.1139052.4989048.15890HepG2TROVE2
    CEACAM1ENSG00000079385.172969.011103975.02180-0.421002.964001.34420HepG2TROVE2
    FDFT1ENSG00000079459.82646.376503807.19350-0.524704.491302.49960HepG2TROVE2
    PTPRHENSG00000080031.5506.63590734.21090-0.535203.463101.70850HepG2TROVE2
    JMJD4ENSG00000081692.8145.2085080.905700.843703.278801.56710HepG2TROVE2
    NFE2L1ENSG00000082641.114007.165605663.01600-0.499004.230902.30920HepG2TROVE2
    SMAP2ENSG00000084070.7481.20360683.80920-0.506903.059601.42110HepG2TROVE2
    HALENSG00000084110.6188.87020582.35970-1.6245020.5171017.25620HepG2TROVE2
    MGST2ENSG00000085871.4955.311501374.82310-0.525203.921202.06690HepG2TROVE2
    HSD17B2ENSG00000086696.6244.48340376.03520-0.621103.137301.47400HepG2TROVE2
    LPCAT2ENSG00000087253.7502.94260343.366100.550503.183501.50430HepG2TROVE2
    SH3BP2ENSG00000087266.11898.86920512.992700.809105.194403.07340HepG2TROVE2
    GMCL1ENSG00000087338.4411.59250632.83970-0.620604.160202.25260HepG2TROVE2
    KDM2BENSG00000089094.12423.24300618.52310-0.547303.382401.64110HepG2TROVE2
    FUSENSG00000089280.146029.130504172.265000.531003.018701.38960HepG2TROVE2
    RAB11FIP3ENSG00000090565.11622.78360926.57630-0.573203.703801.90410HepG2TROVE2
    AARSENSG00000090861.112612.880101491.689200.808609.239306.66270HepG2TROVE2
    TFENSG00000091513.1070213.3196097125.28010-0.468103.995902.12270HepG2TROVE2
    TYRO3ENSG00000092445.7318.20740495.17820-0.638004.043002.16390HepG2TROVE2
    XYLBENSG00000093217.5247.63830448.07350-0.855506.240703.97990HepG2TROVE2
    MSH2ENSG00000095002.8471.55580721.59980-0.613804.339402.39030HepG2TROVE2
    FKBP5ENSG00000096060.10857.88820599.865300.516103.450501.69930HepG2TROVE2
    DSPENSG00000096696.912145.3318016189.65240-0.414703.171001.49380HepG2TROVE2
    SCDENSG00000099194.524261.4679037854.06040-0.641806.901204.58230HepG2TROVE2
    NRP1ENSG00000099250.13733.54680494.777900.568003.737201.92350HepG2TROVE2
    HSD17B7P2ENSG00000099251.1056.69010126.10400-1.153404.625802.60800HepG2TROVE2
    SUSD2ENSG00000099994.10259.42850136.162800.929905.439103.28660HepG2TROVE2
    CRYBB2P1ENSG00000100058.8113.41250221.45830-0.965505.306503.17060HepG2TROVE2
    CARD10ENSG00000100065.10490.30210741.97030-0.597703.812501.98300HepG2TROVE2
    LGALS1ENSG00000100097.7634.89670439.468600.530703.150201.48130HepG2TROVE2
    PIK3IP1ENSG00000100100.8206.94840102.857001.008505.379803.23570HepG2TROVE2
    TIMP3ENSG00000100234.111822.535602644.82350-0.537204.466402.48050HepG2TROVE2
    PNPLA3ENSG00000100344.6134.79650235.77850-0.806604.061202.18050HepG2TROVE2
    PYGLENSG00000100504.121352.023501982.06640-0.551904.514302.51270HepG2TROVE2
    ISM2ENSG00000100593.13445.92990713.46410-0.678004.440502.46220HepG2TROVE2
    TUBB1ENSG00000101162.3538.464401240.80160-1.2043011.532708.72420HepG2TROVE2
    DIDO1ENSG00000101191.121690.247902310.18120-0.450803.276301.56560HepG2TROVE2
    RNF24ENSG00000101236.12275.69790697.96190-1.3401016.0755013.05770HepG2TROVE2
    PGK1ENSG00000102144.910340.1499013877.33790-0.424503.308101.59020HepG2TROVE2
    MAGT1ENSG00000102158.15326.77810812.72810-1.3145016.6409013.60190HepG2TROVE2
    TIMP1ENSG00000102265.7536.03070296.278100.855306.740104.43890HepG2TROVE2
    KPNA3ENSG00000102753.5854.49650612.670000.479903.037701.40690HepG2TROVE2
    AXIN1ENSG00000103126.10544.35420810.92760-0.575003.388601.64400HepG2TROVE2
    ABCC1ENSG00000103222.141188.047601661.60660-0.484003.528001.76020HepG2TROVE2
    UBFD1ENSG00000103353.111171.562602028.19000-0.791808.585506.06070HepG2TROVE2
    RBL2ENSG00000103479.10979.311701444.00590-0.560204.344802.39210HepG2TROVE2
    KIAA1199ENSG00000103888.11340.46350961.18000-1.4973021.8892018.48700HepG2TROVE2
    NDRG1ENSG00000104419.102536.605206662.51660-1.3932027.5177023.87660HepG2TROVE2
    SQLEENSG00000104549.71872.096603122.49100-0.738007.249004.89570HepG2TROVE2
    BNIP3LENSG00000104765.101994.801902702.80260-0.438203.132701.47120HepG2TROVE2
    GYS1ENSG00000104812.10618.28270900.13660-0.541903.759701.94210HepG2TROVE2
    SLC1A5ENSG00000105281.81868.447501355.405400.463003.287201.57350HepG2TROVE2
    SULT2A1ENSG00000105398.3862.453601211.81680-0.490703.350501.62050HepG2TROVE2
    PDE4CENSG00000105650.17106.49980248.11410-1.220208.231105.76610HepG2TROVE2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    94 RBPs can affect the gene expression of TROVE2 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    TROVE2ENSG00000116747.8861.36940715.743500.267102.369501.79980HepG2ACO1
    TROVE2ENSG00000116747.81469.721601040.609000.498003.618903.02110HepG2AKAP1
    TROVE2ENSG00000116747.81298.084701062.561200.288702.325901.68740HepG2AUH
    TROVE2ENSG00000116747.8355.85770665.70080-0.903602.258401.41590HepG2BCCIP
    TROVE2ENSG00000116747.8595.361501010.25330-0.762905.057304.01890HepG2CNOT7
    TROVE2ENSG00000116747.8518.41210658.56890-0.345202.613001.62520HepG2YBX3
    TROVE2ENSG00000116747.81104.07010873.819300.337303.072402.40190HepG2CELF1
    TROVE2ENSG00000116747.8760.65790939.78580-0.305102.847402.09590HepG2DAZAP1
    TROVE2ENSG00000116747.8392.13180531.44460-0.438602.857502.16950HepG2DDX21
    TROVE2ENSG00000116747.8701.12580519.765000.431703.218302.23170HepG2DDX24
    TROVE2ENSG00000116747.81294.84410996.826100.377302.500901.90370HepG2DDX3X
    TROVE2ENSG00000116747.8391.23610646.65650-0.725007.759606.63010HepG2DNAJC21
    TROVE2ENSG00000116747.8406.10500640.95910-0.658409.333508.21910HepG2DNAJC2
    TROVE2ENSG00000116747.8694.80500489.134200.506302.411901.38290HepG2AGO1
    TROVE2ENSG00000116747.81271.36990885.725800.521403.208702.47060HepG2EIF4B
    TROVE2ENSG00000116747.81591.821501220.000600.383705.535004.73370HepG2ETF1
    TROVE2ENSG00000116747.8507.70970384.946600.399202.268601.55050HepG2FUBP3
    TROVE2ENSG00000116747.8254.47070410.49030-0.689803.658502.61680HepG2GEMIN5
    TROVE2ENSG00000116747.8449.99790652.85180-0.536803.428902.71850HepG2HNRNPA1
    TROVE2ENSG00000116747.8523.61370726.18110-0.471803.472002.70140HepG2HNRNPC
    TROVE2ENSG00000116747.8575.75330765.55960-0.411102.948702.20920HepG2HNRNPF
    TROVE2ENSG00000116747.8619.28380853.84350-0.463402.231701.66000HepG2HNRNPLL
    TROVE2ENSG00000116747.8390.74840721.37970-0.8845015.0214013.70040HepG2HNRNPU
    TROVE2ENSG00000116747.8439.02560736.86480-0.7471013.0329011.57220HepG2ILF2
    TROVE2ENSG00000116747.8518.89150652.81600-0.331202.007001.31310HepG2MSI2
    TROVE2ENSG00000116747.81419.85590923.354700.620703.002202.07410HepG2PABPC1
    TROVE2ENSG00000116747.8341.30040714.03710-1.0650019.3837017.52880HepG2PARN
    TROVE2ENSG00000116747.8554.55380818.46260-0.561605.593704.77750HepG2PCBP1
    TROVE2ENSG00000116747.81071.60080782.659800.453202.360501.39820HepG2PCBP2
    TROVE2ENSG00000116747.8443.59210643.41230-0.536505.438504.43550HepG2PPIL4
    TROVE2ENSG00000116747.8795.46180505.244000.654704.937803.89290HepG2PRPF8
    TROVE2ENSG00000116747.81098.60680832.884600.399404.784904.10830HepG2PTBP1
    TROVE2ENSG00000116747.81181.28710901.888900.389204.140003.39720HepG2QKI
    TROVE2ENSG00000116747.81096.80080755.319800.538002.568501.88840HepG2RAVER1
    TROVE2ENSG00000116747.81684.223901019.686800.7239014.6164013.61540HepG2RBM22
    TROVE2ENSG00000116747.81102.45300818.577200.429404.200203.38440HepG2RBM25
    TROVE2ENSG00000116747.81090.03050926.863800.233801.930001.45970HepG2NELFE
    TROVE2ENSG00000116747.8728.334001014.39540-0.477902.799401.99510HepG2RPS3A
    TROVE2ENSG00000116747.8464.72440642.41810-0.467104.826004.01520HepG2SAFB2
    TROVE2ENSG00000116747.81137.92430867.017800.392203.063602.44520HepG2SF3B4
    TROVE2ENSG00000116747.8603.83760749.16380-0.311102.933402.27320HepG2SMN1
    TROVE2ENSG00000116747.81917.568401151.684600.7354020.3378019.30610HepG2SRFBP1
    TROVE2ENSG00000116747.81333.59590905.028900.559209.883009.11250HepG2SRSF1
    TROVE2ENSG00000116747.81267.55780909.281200.479202.240801.35230HepG2SRSF3
    TROVE2ENSG00000116747.81075.43430736.332300.546409.148308.24790HepG2SRSF9
    TROVE2ENSG00000116747.8990.98980705.854900.489402.629201.46070HepG2SUB1
    TROVE2ENSG00000116747.81099.03220813.614100.433705.140604.41550HepG2TAF15
    TROVE2ENSG00000116747.8627.06910832.00330-0.408001.934601.31360HepG2TARDBP
    TROVE2ENSG00000116747.81023.30810747.453200.453104.806103.71380HepG2TIA1
    TROVE2ENSG00000116747.8282.29530700.93930-1.3121023.6391022.44590HepG2TIAL1
    TROVE2ENSG00000116747.8465.30270707.22230-0.604007.923807.04690HepG2TRIM56
    TROVE2ENSG00000116747.8186.60890366.36370-0.973306.274004.00960HepG2TROVE2
    TROVE2ENSG00000116747.81104.69020690.004000.678906.825505.85120HepG2U2AF1
    TROVE2ENSG00000116747.8754.62840518.120000.542407.074906.08120HepG2ZC3H8
    TROVE2ENSG00000116747.8633.53510878.78340-0.472106.641805.89010HepG2ZNF622
    TROVE2ENSG00000116747.81815.226801247.868800.540604.719903.13170K562AARS
    TROVE2ENSG00000116747.82953.500402603.859400.181702.075701.57120K562AGGF1
    TROVE2ENSG00000116747.83329.506202709.431100.297202.705102.05910K562AKAP8L
    TROVE2ENSG00000116747.82492.705003081.75380-0.306003.143801.81880K562APOBEC3C
    TROVE2ENSG00000116747.84691.839003053.229600.619709.494608.51170K562AQR
    TROVE2ENSG00000116747.81383.764801664.85550-0.266802.560201.31340K562BCCIP
    TROVE2ENSG00000116747.82402.501703227.90720-0.426107.521105.67030K562CPEB4
    TROVE2ENSG00000116747.82090.797201691.241400.305902.954302.14340K562CPSF6
    TROVE2ENSG00000116747.85163.087004294.030400.265803.234802.18260K562CELF1
    TROVE2ENSG00000116747.81076.895601410.77740-0.389605.093803.28990K562DDX27
    TROVE2ENSG00000116747.81992.700102606.59350-0.387404.390703.03660K562DDX3X
    TROVE2ENSG00000116747.82059.264202642.77990-0.359904.748602.87870K562DDX6
    TROVE2ENSG00000116747.83416.294202915.558400.228602.674901.81790K562DKC1
    TROVE2ENSG00000116747.82608.539401834.357700.507904.241102.62380K562EEF2
    TROVE2ENSG00000116747.82247.564102863.28510-0.349305.593603.84630K562EIF2S1
    TROVE2ENSG00000116747.81292.481501867.27230-0.530809.397808.19090K562EIF2S2
    TROVE2ENSG00000116747.81927.238802723.30910-0.498805.322504.18570K562EIF4A3
    TROVE2ENSG00000116747.81870.218702452.54720-0.391105.404603.71280K562EIF4B
    TROVE2ENSG00000116747.81929.236302377.21080-0.301203.179701.77670K562EWSR1
    TROVE2ENSG00000116747.81365.404702354.21950-0.7859013.0669011.08420K562FIP1L1
    TROVE2ENSG00000116747.82054.065601607.666100.353403.679602.09800K562FUS
    TROVE2ENSG00000116747.82094.517602832.13760-0.435306.152105.30300K562FXR1
    TROVE2ENSG00000116747.83624.644802402.972700.592903.419102.61730K562G3BP2
    TROVE2ENSG00000116747.81640.289402488.40780-0.601309.216507.81510K562GRSF1
    TROVE2ENSG00000116747.81274.328801936.31870-0.603606.059404.61230K562HNRNPM
    TROVE2ENSG00000116747.81867.026802327.12380-0.317803.902102.83620K562HNRNPU
    TROVE2ENSG00000116747.81965.600503191.90660-0.6994011.235809.65870K562HSPD1
    TROVE2ENSG00000116747.83945.272102875.392700.456302.349401.59790K562KIF1C
    TROVE2ENSG00000116747.81879.273201378.869900.446602.482501.60150K562KRR1
    TROVE2ENSG00000116747.82703.450603285.57080-0.281302.169801.42090K562MAGOH
    TROVE2ENSG00000116747.81086.153701576.11460-0.537106.451505.08650K562METAP2
    TROVE2ENSG00000116747.81644.096802123.37490-0.369106.229405.05690K562MTPAP
    TROVE2ENSG00000116747.83274.719502257.802500.536402.702601.83150K562NAA15
    TROVE2ENSG00000116747.82686.489103588.63370-0.417705.883703.89200K562PNPT1
    TROVE2ENSG00000116747.81588.937302672.41770-0.7501011.835609.78510K562PPIG
    TROVE2ENSG00000116747.8903.444601224.49400-0.438703.618402.56570K562PSIP1
    TROVE2ENSG00000116747.83113.847603971.32740-0.350905.365004.00790K562PUM2
    TROVE2ENSG00000116747.83663.090502687.031200.446904.528303.85690K562PUS1
    TROVE2ENSG00000116747.83558.751202618.091300.442807.720906.76020K562RBM15
    TROVE2ENSG00000116747.81288.167401743.86560-0.437003.695502.51750K562RPS3
    TROVE2ENSG00000116747.82689.735602385.079700.173302.181901.34180K562SRPK2
    TROVE2ENSG00000116747.82477.599503129.10590-0.336803.129902.38180K562SRSF1
    TROVE2ENSG00000116747.81229.274301683.41220-0.453605.041403.54780K562SRSF4
    TROVE2ENSG00000116747.82498.230603167.18970-0.342302.706102.00560K562TARDBP
    TROVE2ENSG00000116747.82214.025503055.02530-0.464504.940503.79790K562TIA1
    TROVE2ENSG00000116747.8675.173401177.78180-0.802709.140807.36670K562TIAL1
    TROVE2ENSG00000116747.8864.061102153.73360-1.3176056.2584052.16360K562TROVE2
    TROVE2ENSG00000116747.81892.303902501.56440-0.402707.816906.68310K562UPF1
    TROVE2ENSG00000116747.81404.727801799.75850-0.357502.556301.40900K562XRN2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    159 alternative splicing events after Knockdown/Knockout TROVE2 protein :

    Only display 100 entries as example. Please click "View All" button to see all 159 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESAP30LENSG00000164576.7chr5+1538320151538320551538306501538307731538329611538330600.103000.000090.07794includedK562TROVE2
    SEHIRAENSG00000100084.10chr22-1938660219386715193855141938561019393308193934030.137000.000000.00420includedK562TROVE2
    SEU2SURPENSG00000163714.13chr3+1427428161427428601427416941427419061427459901427460950.081000.000000.00801includedK562TROVE2
    SEASXL1ENSG00000171456.12chr20+3095958030959677309568173095692631015930310160510.189000.000120.09202includedK562TROVE2
    SETRPM7ENSG00000092439.9chr15-5088038750880447508785885087868550881788508818530.112000.000060.05882includedK562TROVE2
    SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.164000.000000.00390includedK562TROVE2
    SESGMS1ENSG00000198964.9chr10-5210014652100224520869905208708252103251521040060.098000.000000.00505includedK562TROVE2
    SEMYSM1ENSG00000162601.5chr1-5912912159129194591270775912718359131170591313030.091000.000110.08493includedK562TROVE2
    SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306950330.144000.000000.00097includedK562TROVE2
    SESREK1ENSG00000153914.11chr5+6545189265454760654492906544942465455046654551620.139000.000020.03246includedK562TROVE2
    SEWNK1ENSG00000060237.12chr12+9770319782709712489714369873779875270.104000.000080.06618includedK562TROVE2
    SEFNBP4ENSG00000109920.8chr11-4774728847747388477460234774633047752925477531130.104000.000050.05547includedK562TROVE2
    SESTRADAENSG00000266173.1chr17-6178136461781407617810176178111161781700617819420.131000.000130.09396includedK562TROVE2
    SEPPP2R2DENSG00000175470.14chr10+1337483971337485101337479591337480591337535341337537000.104000.000050.05590includedK562TROVE2
    SECREBZFENSG00000137504.9chr11-8537422285374337853729968537350185374567853746450.121000.000000.00137includedK562TROVE2
    SEMLLT10ENSG00000078403.12chr10+2197741921977467219702602197030522002700220028790.391000.000130.09316includedK562TROVE2
    SEPMPCBENSG00000105819.9chr7+1029480421029481551029448571029449371029493981029495420.102000.000060.05882includedK562TROVE2
    SEOTUD6BENSG00000155100.6chr8+9208881992088959920860589208613992090583920908960.088000.000000.00502includedK562TROVE2
    SERP11-313J2.1ENSG00000215146.4chr10-4283594842836004428273134283368842863263428634220.628000.000070.06587includedK562TROVE2
    SENUPL2ENSG00000136243.12chr7+2323679123236866232362982323638523239076232391610.257000.000010.01738includedK562TROVE2
    SECD46ENSG00000117335.14chr1+2079635972079636902079589632079590272079668632079688580.117000.000090.07649includedK562TROVE2
    SEFANCAENSG00000187741.10chr16-8980611389806208898058858980596189806401898064670.071000.000080.06891includedK562TROVE2
    SERAD51L3-RFFLENSG00000267618.1chr17-3343314633433268334304723343056333433404334335000.271000.000060.05882includedK562TROVE2
    SEXPO1ENSG00000082898.12chr2-6175240461752468617497456174981861752626617536560.735000.000000.00035includedK562TROVE2
    SERBM39ENSG00000131051.16chr20-3432844634328519343268893432693934328745343288090.110000.000020.02779includedK562TROVE2
    SEZMYND8ENSG00000101040.15chr20-4584128645841370458394054583954245848908458489750.147000.000000.00701includedK562TROVE2
    SERPL17ENSG00000265681.2chr18-4701818947018203470179014701795447018644470187690.067000.000000.00281includedK562TROVE2
    SEC1orf63ENSG00000117616.13chr1-2557094425570989255700402557012425571640255717920.243000.000060.05882includedK562TROVE2
    SESETXENSG00000107290.9chr9-1351447891351448761351367421351403721351450011351450890.254000.000000.00502includedK562TROVE2
    SESOS1ENSG00000115904.8chr2-3921641039216455392146133921473239222263392225280.233000.000000.00155includedK562TROVE2
    SEGAPVD1ENSG00000165219.17chr9+1280974501280975311280947881280949081280992961280993740.202000.000040.04785includedK562TROVE2
    SEWDR77ENSG00000116455.9chr1-1119841201119842261119839191119840111119846461119847150.053000.000140.09643includedK562TROVE2
    SEPPIL2ENSG00000100023.13chr22+220480912204816122043020220431382204888122048954-0.065000.000000.00735excludedK562TROVE2
    SECLDND1ENSG00000080822.12chr3-982356439823572398234327982346769823589598235991-0.282000.000050.05547excludedK562TROVE2
    SEAC079466.1ENSG00000266976.1chr19+291018882910306129097594290980112910334529106136-0.111000.000000.00054excludedK562TROVE2
    SENBEAL2ENSG00000160796.12chr3+470485554704864547047847470479394704873047048840-0.052000.000140.09643excludedK562TROVE2
    SEMLXIPENSG00000175727.9chr12+122616838122616930122615390122615480122617894122618534-0.054000.000040.05002excludedK562TROVE2
    SERAB1AENSG00000138069.12chr2-653181166531821265315004653158246532510465325200-0.065000.000020.02779excludedK562TROVE2
    SEERP29ENSG00000089248.6chr12+112457559112457698112451119112451413112459953112460972-0.068000.000120.08972excludedK562TROVE2
    SEMLXENSG00000108788.7chr17+407204874072057740719636407196734072085440720961-0.146000.000010.01217excludedK562TROVE2
    SECALML4ENSG00000129007.10chr15-684918786849201968489777684899666849745868497489-0.281000.000050.05547excludedK562TROVE2
    SEPARP2ENSG00000129484.9chr14+208255542082567920825209208253082082579620826063-0.214000.000010.01643excludedK562TROVE2
    SERBM38ENSG00000132819.12chr20+559683545596838955967709559678335598259855982916-0.224000.000000.00968excludedK562TROVE2
    SESPATA5L1ENSG00000171763.13chr15+456992594569942145697517456977034570256945702689-0.105000.000100.07880excludedK562TROVE2
    SERWDD3ENSG00000122481.12chr1+957029039570301695699769956998719570976695709967-0.301000.000000.00609excludedK562TROVE2
    SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.219000.000140.09782excludedK562TROVE2
    SEOTUD3ENSG00000169914.5chr1+202329242023310920231383202314802023406220239438-0.299000.000010.01738excludedK562TROVE2
    SENDRG3ENSG00000101079.16chr20-353353743533541035317081353171873535008135350186-0.061000.000110.08522excludedK562TROVE2
    SEGIPRENSG00000010310.4chr19+461805804618064146180206461803664618096746181037-0.182000.000060.06153excludedK562TROVE2
    SEZMYND8ENSG00000101040.15chr20-458675014586788245865069458652604587803045878183-0.134000.000130.09396excludedK562TROVE2
    SEOSBPL8ENSG00000091039.12chr12-768536387685367576844630768447687688128976881398-0.234000.000050.05175excludedK562TROVE2
    SEATP6V0BENSG00000117410.9chr1+444414714444152044440615444407794444176144441845-0.085000.000000.00042excludedK562TROVE2
    SEZNF711ENSG00000147180.12chrX+845019358450218984500908845010288450255284502657-0.674000.000040.05002excludedK562TROVE2
    SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.211000.000050.05151includedHepG2TROVE2
    SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.104000.000010.02373includedHepG2TROVE2
    SEEIF4HENSG00000106682.10chr7+7360457673604636736041517360424873609070736092080.099000.000010.02400includedHepG2TROVE2
    SEZNF207ENSG00000010244.12chr17+3069368330693776306923483069250630694790306950330.184000.000050.05151includedHepG2TROVE2
    SEGTF2IENSG00000077809.8chr7+7412917674129236741253627412544074131213741312700.075000.000080.07097includedHepG2TROVE2
    SEMORF4L2ENSG00000123562.12chrX-1029396081029396571029334261029335791029400981029401880.213000.000000.00061includedHepG2TROVE2
    SEHNRNPDENSG00000138668.14chr4-8329268083292737832807218328079283294598832951090.135000.000010.02373includedHepG2TROVE2
    SEPRKRIRENSG00000137492.3chr11-7607538176075476760719997607210776076895760770160.205000.000000.01437includedHepG2TROVE2
    SESUGT1ENSG00000165416.10chr13+5323223353232361532316665323175753232533532326030.075000.000030.04579includedHepG2TROVE2
    SEAFMIDENSG00000183077.11chr17+7620168376201819761987837619883276202026762021310.244000.000000.00002includedHepG2TROVE2
    SECD46ENSG00000117335.14chr1+2079409512079409962079403572079405402079411232079411680.145000.000000.00000includedHepG2TROVE2
    SECD46ENSG00000117335.14chr1+2079635972079636902079589632079590272079668632079688580.188000.000000.00038includedHepG2TROVE2
    SECALD1ENSG00000122786.15chr7+1346204381346205161346177381346181411346258421346259880.110000.000000.01437includedHepG2TROVE2
    SEGPR126ENSG00000112414.10chr6+1427620441427620901427593481427595011427644731427674030.177000.000010.02400includedHepG2TROVE2
    SEGKENSG00000198814.8chrX+3071584830715866307147333071480030718530307185660.053000.000040.04764includedHepG2TROVE2
    SECALUENSG00000128595.12chr7+1283876061283884211283793451283794861283886261283888580.072000.000000.01437includedHepG2TROVE2
    SESDF2ENSG00000132581.5chr17-2697850326978560269758592697629426982304269825010.142000.000010.02400includedHepG2TROVE2
    SENKD1ENSG00000140807.4chr16+5065166350651716506422045064227150655512506556190.065000.000020.03230includedHepG2TROVE2
    SERP11-407N17.3ENSG00000258941.2chr14+3979013139790260397884123978849539796067397962260.217000.000060.05780includedHepG2TROVE2
    SEIGF2BP2ENSG00000073792.11chr3-1854109641854110161854104861854105501854143991854144510.132000.000000.01437includedHepG2TROVE2
    SECCNCENSG00000112237.8chr6-999920549999214999990377999914859999298799993106-0.074000.000040.04764excludedHepG2TROVE2
    SEFBXO22ENSG00000167196.9chr15+761968317619697076196322761964447620554376205631-0.217000.000050.05151excludedHepG2TROVE2
    SEARGLU1ENSG00000134884.9chr13-107209867107209964107209453107209479107211779107212005-0.131000.000040.04764excludedHepG2TROVE2
    SESLC13A5ENSG00000141485.11chr17-659084765909856588031658965765940976594259-0.136000.000010.02400excludedHepG2TROVE2
    SECANT1ENSG00000171302.12chr17-769961817699635276993921769940457700574577005875-0.292000.000050.05151excludedHepG2TROVE2
    SELYRM1ENSG00000102897.5chr16+209116192091185720911223209113262092687720927036-0.235000.000100.09332excludedHepG2TROVE2
    SESS18L1ENSG00000184402.10chr20+607293366072952160718850607189456073372760733998-0.267000.000070.07097excludedHepG2TROVE2
    SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.074000.000030.04370excludedHepG2TROVE2
    A5SSTMEM165ENSG00000134851.8chr4+5628410256284331562841025628415256290704562908100.084000.000000.00000longerK562TROVE2
    A5SSMIB2ENSG00000197530.8chr1+1558768155907915587681558862155915315593250.518000.000010.02490longerK562TROVE2
    A5SSSLC36A4ENSG00000180773.10chr11-929159719291606092916000929160609291485692914952-0.340000.000010.01171shorterK562TROVE2
    A5SSMAT2AENSG00000168906.8chr2+857700238577016685770023857701578577079285772403-0.110000.000000.00042shorterK562TROVE2
    A5SSSREK1ENSG00000153914.11chr5+654582416545842065458241654583116545961965459750-0.122000.000030.03988shorterK562TROVE2
    RIAP1G2ENSG00000213983.7chr14-2403117024031624240311702403139424031496240316240.131000.000100.08809includedHepG2TROVE2
    RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.257000.000110.08809includedHepG2TROVE2
    RIUNC50ENSG00000115446.7chr2+992250419922650299225041992251899922621899226502-0.103000.000020.02507excludedHepG2TROVE2
    RIATF4ENSG00000128272.10chr22+399165683991767639916568399167563991735839917676-0.106000.000000.00395excludedHepG2TROVE2
    RIDHRS2ENSG00000100867.10chr14+241090022411242824109002241091042411087424112428-0.163000.000000.00000excludedHepG2TROVE2
    RISGK1ENSG00000118515.7chr6-134491963134492316134491963134492053134492160134492316-0.204000.000020.02361excludedHepG2TROVE2
    RIDDX56ENSG00000136271.6chr7-4461318144613524446131814461334344613434446135240.054000.000750.06858includedK562TROVE2
    RIRREB1ENSG00000124782.15chr6+7181356718231571813567181479718210271823150.214000.000690.06584includedK562TROVE2
    RIZNF131ENSG00000172262.7chr5+4316135043162033431613504316170843161810431620330.118000.000240.03141includedK562TROVE2
    RIGMPPAENSG00000144591.13chr2+2203701792203704832203701792203702772203704162203704830.136000.001020.08587includedK562TROVE2
    RIZNF232ENSG00000167840.9chr17-5012220501316350122205012347501268850131630.352000.001030.08587includedK562TROVE2
    RIRNF181ENSG00000168894.5chr2+8582364185824139858236418582377285823929858241390.411000.000650.06270includedK562TROVE2
    RIMAT2AENSG00000168906.8chr2+8576927785769870857692778576949685769687857698700.067000.000000.00000includedK562TROVE2
    RIMIIPENSG00000116691.6chr1+120892791209018112089279120899511209008412090181-0.150000.000170.02656excludedK562TROVE2





    15 RBPs can affect the splicing of TROVE2 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930383090.426000.000000.00650includedK562TAF15
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930449491930451700.428000.001750.05640includedK562PRPF8
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.224000.004980.07578includedHepG2U2AF1
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.278000.000000.00002includedK562AKAP8L
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.411000.002970.06425includedHepG2HNRNPK
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.210000.002050.02235includedK562AQR
    SETROVE2ENSG00000116747.8chr1+193038163193038764193028551193028906193044949193045170-0.141000.002330.07472excludedK562FXR1
    SETROVE2ENSG00000116747.8chr1+193038163193038764193028551193028906193044949193045170-0.217000.000070.09744excludedK562EWSR1
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.415000.000000.00000includedK562PUS1
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.201000.002090.04097includedK562U2AF1
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.223000.000620.09876includedK562SBDS
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.170000.002430.06573includedK562UTP18
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.233000.000040.00200includedK562RBM15
    SETROVE2ENSG00000116747.8chr1+1930290031930293521930287881930289061930381631930387640.358000.000000.00000includedK562AGGF1
    SETROVE2ENSG00000116747.8chr1+193038163193038764193028551193028906193044949193045170-0.346000.000000.00088excludedK562SAFB
    SETROVE2ENSG00000116747.8chr1+193038163193038764193028551193028906193044949193045170-0.164000.003400.09915excludedK562PTBP1
    MXETROVE2ENSG00000116747.8chr1+1930381631930387641930449491930451701930291631930293521930456301930457770.156000.000250.006751includedK562U2AF1

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    No autoregularoty alternative splicing events between protein TROVE2 and its RNA.