RP11-407N17.3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-407N17.3 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-407N17.3 RNA is bound by 50 proteins.

eCLIP assay for RP11-407N17.3 is not avaliable on ENCORE database.

50 proteins are bound to RP11-407N17.3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	39819911	39819978	+	3'-UTR,intron-Distal	4.95044	10.19539	HepG2	CSTF2
chr14	39819857	39819911	+	3'-UTR,intron-Distal,polyA_site	4.43077	6.48444	HepG2	CSTF2
chr14	39819714	39819805	+	3'-UTR,intron-Distal	4.03183	15.98088	HepG2	DDX55
chr14	39819726	39819816	+	3'-UTR,intron-Distal	3.10911	9.22986	HepG2	KHSRP
chr14	39819679	39819714	+	3'-UTR,intron-Distal	3.97071	4.67506	HepG2	DDX55
chr14	39819728	39819805	+	3'-UTR,intron-Distal	4.30490	4.66293	HepG2	TIA1
chr14	39819652	39819804	+	3'-UTR,intron-Distal	3.57346	5.47438	HepG2	TIAL1
chr14	39819726	39819829	+	3'-UTR,intron-Distal	3.07104	6.70516	HepG2	FUBP3
chr14	39746133	39746150	+	5'-UTR,CDS,intron-Proximal	4.08741	12.40018	HepG2	PPIG
chr14	39746121	39746170	+	5'-UTR,CDS,intron-Proximal	4.78000	14.69272	HepG2	AQR
chr14	39746083	39746179	+	5'-UTR,CDS,intron-Proximal	3.05786	10.56396	HepG2	SF3A3
chr14	39746126	39746189	+	5'-UTR,CDS,intron-Proximal	4.49975	65.93397	HepG2	U2AF2
chr14	39746129	39746186	+	5'-UTR,CDS,intron-Proximal	3.65173	13.45038	HepG2	U2AF1
chr14	39746150	39746170	+	5'-UTR,CDS,intron-Proximal	4.05041	12.40018	HepG2	PPIG
chr14	39788436	39788495	+	CDS	4.17502	39.95503	HepG2	BCLAF1
chr14	39771365	39771413	+	CDS	4.03792	4.91329	HepG2	FASTKD2
chr14	39782543	39782644	+	CDS,intron-Proximal	3.36596	11.10802	HepG2	FXR2
chr14	39764226	39764234	+	CDS,intron-Proximal	4.65408	28.74618	HepG2	BCLAF1
chr14	39771411	39771418	+	CDS	5.42481	26.90875	HepG2	BCLAF1
chr14	39764138	39764234	+	CDS,intron-Proximal	3.40818	12.96086	HepG2	ZNF800
chr14	39760259	39760301	+	CDS,intron-Distal,intron-Proximal	3.81933	8.21643	HepG2	UCHL5
chr14	39764128	39764141	+	CDS,intron-Proximal	3.97511	20.24575	HepG2	BCLAF1
chr14	39748546	39748558	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.07834	22.66710	HepG2	BCLAF1
chr14	39788413	39788421	+	CDS	5.49746	18.83305	HepG2	BCLAF1
chr14	39769181	39769189	+	CDS	5.06296	19.15489	HepG2	BCLAF1
chr14	39760261	39760277	+	CDS,intron-Distal	3.39927	12.62843	HepG2	GRWD1
chr14	39760237	39760317	+	CDS,intron-Distal,intron-Proximal	3.48599	11.71772	HepG2	PRPF8
chr14	39717164	39717220	+	CDS	6.10565	13.95734	HepG2	BCLAF1
chr14	39764146	39764195	+	CDS	3.17593	9.19564	HepG2	GRWD1
chr14	39760260	39760293	+	CDS,intron-Distal	3.75692	38.62271	HepG2	BCLAF1
chr14	39748716	39748740	+	CDS	5.20292	9.91534	HepG2	GRWD1
chr14	39782543	39782586	+	CDS,intron-Proximal	3.90739	17.95347	HepG2	BCLAF1
chr14	39773561	39773620	+	CDS,intron-Proximal	3.74478	6.34676	HepG2	PRPF8
chr14	39762474	39762485	+	CDS,intron-Proximal	3.07459	10.21024	HepG2	BCLAF1
chr14	39796067	39796095	+	CDS,intron-Proximal	3.45011	14.57368	HepG2	BCLAF1
chr14	39748539	39748546	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.27973	4.76888	HepG2	UCHL5
chr14	39777701	39777733	+	CDS	3.85955	19.82091	HepG2	BCLAF1
chr14	39716451	39716501	+	CDS	4.31936	14.24397	HepG2	BCLAF1
chr14	39709775	39709844	+	CDS	4.60136	16.88216	HepG2	BCLAF1
chr14	39818131	39818182	+	CDS,intron-Proximal	3.86406	5.81997	HepG2	LSM11
chr14	39818116	39818180	+	CDS	3.76634	6.91339	HepG2	PABPN1
chr14	39771332	39771335	+	CDS,intron-Proximal	4.17576	16.12884	HepG2	BCLAF1
chr14	39771418	39771454	+	CDS,intron-Proximal	5.19579	31.58899	HepG2	BCLAF1
chr14	39783982	39784003	+	CDS	5.71507	30.12860	HepG2	BCLAF1
chr14	39716562	39716626	+	CDS	4.64627	22.28560	HepG2	BCLAF1
chr14	39717319	39717346	+	CDS,intron-Proximal	5.05910	11.54096	HepG2	BCLAF1
chr14	39716524	39716549	+	CDS	4.00099	7.23562	HepG2	BCLAF1
chr14	39790215	39790260	+	CDS,intron-Distal	3.86058	11.15936	HepG2	PPIG
chr14	39769116	39769187	+	CDS	3.82082	11.38273	HepG2	ZNF800
chr14	39763203	39763209	+	CDS,intron-Proximal	4.91924	16.89898	HepG2	BCLAF1
chr14	39716301	39716355	+	CDS	4.76631	6.20441	HepG2	HLTF
chr14	39764141	39764191	+	CDS	4.52236	39.02284	HepG2	BCLAF1
chr14	39760257	39760301	+	CDS,intron-Distal,intron-Proximal	3.30774	17.13878	HepG2	PPIG
chr14	39764191	39764226	+	CDS	4.66487	42.90191	HepG2	BCLAF1
chr14	39762532	39762539	+	CDS	4.89502	12.48233	HepG2	BCLAF1
chr14	39762560	39762585	+	CDS	5.87523	26.69673	HepG2	BCLAF1
chr14	39748730	39748739	+	CDS	4.77130	14.21310	HepG2	BCLAF1
chr14	39772698	39772728	+	CDS	5.15521	28.56729	HepG2	BCLAF1
chr14	39769106	39769162	+	CDS	4.51731	38.00853	HepG2	BCLAF1
chr14	39816913	39816961	+	CDS,intron-Proximal	3.29048	11.44449	HepG2	BUD13
chr14	39769122	39769184	+	CDS	3.20069	3.90917	HepG2	PRPF4
chr14	39771330	39771373	+	CDS,intron-Proximal	3.20930	7.70750	HepG2	ZNF800
chr14	39769162	39769181	+	CDS	4.42707	26.05608	HepG2	BCLAF1
chr14	39763209	39763225	+	CDS	5.27157	29.47766	HepG2	BCLAF1
chr14	39819338	39819444	+	CDS,intron-Distal	3.67036	7.47848	HepG2	ZC3H11A
chr14	39796058	39796114	+	CDS,intron-Proximal	3.63798	44.72118	HepG2	U2AF2
chr14	39815120	39815144	+	CDS	3.34408	12.67896	HepG2	BCLAF1
chr14	39783942	39783979	+	CDS,intron-Proximal	3.59938	5.74981	HepG2	GRWD1
chr14	39815108	39815176	+	CDS	3.42047	5.46645	HepG2	UCHL5
chr14	39760277	39760300	+	CDS,intron-Distal	3.35962	11.40684	HepG2	GRWD1
chr14	39769067	39769076	+	CDS,intron-Proximal	5.29392	32.21573	HepG2	BCLAF1
chr14	39777739	39777759	+	CDS	4.46467	15.99938	HepG2	BCLAF1
chr14	39763225	39763243	+	CDS	4.60669	25.46606	HepG2	BCLAF1
chr14	39783987	39784002	+	CDS	3.97099	6.18214	HepG2	GRWD1
chr14	39716390	39716465	+	CDS	3.08272	3.60157	HepG2	GRWD1
chr14	39777764	39777791	+	CDS	3.47569	9.64262	HepG2	BCLAF1
chr14	39773470	39773510	+	CDS,intron-Proximal	3.35909	10.16174	HepG2	U2AF2
chr14	39815119	39815147	+	CDS	3.11413	5.41373	HepG2	PPIG
chr14	39764125	39764217	+	CDS,intron-Proximal	3.76149	4.69757	HepG2	TRA2A
chr14	39769172	39769224	+	CDS,intron-Proximal	4.00536	3.71591	HepG2	PRPF8
chr14	39760293	39760300	+	CDS,intron-Distal	3.21459	16.46798	HepG2	BCLAF1
chr14	39763243	39763260	+	CDS	4.41544	26.05608	HepG2	BCLAF1
chr14	39787203	39787213	+	CDS	5.91655	12.09921	HepG2	BCLAF1
chr14	39716377	39716423	+	CDS	4.12316	5.55255	HepG2	HLTF
chr14	39784913	39784922	+	CDS	4.79606	31.22974	HepG2	BCLAF1
chr14	39716585	39716637	+	CDS	3.18190	6.40644	HepG2	HLTF
chr14	39764199	39764221	+	CDS	3.08112	6.04751	HepG2	GRWD1
chr14	39783942	39783954	+	CDS,intron-Proximal	4.29529	14.52112	HepG2	BCLAF1
chr14	39769117	39769173	+	CDS	3.52207	10.01784	HepG2	GRWD1
chr14	39788462	39788488	+	CDS	3.92128	5.46429	HepG2	ZNF800
chr14	39815109	39815166	+	CDS	3.29318	4.79633	HepG2	G3BP1
chr14	39762568	39762585	+	CDS	3.08031	4.89942	HepG2	GRWD1
chr14	39763260	39763275	+	CDS	3.61073	18.99913	HepG2	BCLAF1
chr14	39717321	39717336	+	CDS	4.11779	3.24150	HepG2	HLTF
chr14	39783954	39783982	+	CDS	4.84881	24.88719	HepG2	BCLAF1
chr14	39773494	39773506	+	CDS,intron-Proximal	4.27188	15.11988	HepG2	BCLAF1
chr14	39796061	39796112	+	CDS,intron-Proximal	4.25406	4.08501	K562	U2AF2
chr14	39772681	39772698	+	CDS,intron-Proximal	4.72462	23.57308	HepG2	BCLAF1
chr14	39764128	39764138	+	CDS,intron-Proximal	3.43779	3.69510	HepG2	ZNF800
chr14	39784907	39784923	+	CDS,intron-Proximal	3.99477	5.75355	HepG2	LIN28B
chr14	39769106	39769180	+	CDS	3.72883	6.66856	HepG2	FXR2
chr14	39760239	39760261	+	CDS,intron-Distal	3.72389	12.47018	HepG2	GRWD1
chr14	39762473	39762482	+	CDS,intron-Proximal	3.90339	8.91582	HepG2	PPIG
chr14	39773506	39773533	+	CDS	3.90048	22.83779	HepG2	BCLAF1
chr14	39771335	39771359	+	CDS	4.97341	27.99426	HepG2	BCLAF1
chr14	39772687	39772711	+	CDS	3.85441	4.65332	HepG2	ZNF800
chr14	39760222	39760239	+	CDS,intron-Distal,intron-Proximal	4.05408	6.84754	HepG2	GRWD1
chr14	39760223	39760243	+	CDS,intron-Distal	4.31200	18.14334	HepG2	BCLAF1
chr14	39773533	39773582	+	CDS	4.19150	36.41616	HepG2	BCLAF1
chr14	39760243	39760298	+	CDS,intron-Distal	3.80206	10.14775	HepG2	ZNF800
chr14	39815218	39815230	+	CDS	4.23483	13.37200	HepG2	BCLAF1
chr14	39787147	39787203	+	CDS,intron-Proximal	5.62746	49.70934	HepG2	BCLAF1
chr14	39760243	39760260	+	CDS,intron-Distal	4.13286	34.22397	HepG2	BCLAF1
chr14	39782586	39782643	+	CDS	4.76496	40.59903	HepG2	BCLAF1
chr14	39796209	39796226	+	CDS	3.08340	7.02897	HepG2	GRWD1
chr14	39788424	39788496	+	CDS,intron-Proximal	3.62264	6.72814	HepG2	PABPN1
chr14	39748663	39748730	+	5'-UTR,CDS	3.63808	32.96509	HepG2	BCLAF1
chr14	39748540	39748546	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.13712	18.32889	HepG2	BCLAF1
chr14	39716389	39716445	+	CDS	4.41182	20.72052	HepG2	BCLAF1
chr14	39716762	39716850	+	CDS	4.14498	17.28671	HepG2	BCLAF1
chr14	39771359	39771393	+	CDS	5.45625	42.65612	HepG2	BCLAF1
chr14	39771393	39771411	+	CDS	5.97827	43.10654	HepG2	BCLAF1
chr14	39816916	39816936	+	CDS,intron-Proximal	4.86932	19.10180	HepG2	BCLAF1
chr14	39784885	39784907	+	CDS,intron-Proximal	3.75912	4.91603	HepG2	LIN28B
chr14	39784886	39784913	+	CDS,intron-Proximal	5.11543	40.21945	HepG2	BCLAF1
chr14	39816916	39816964	+	CDS,intron-Proximal	3.23995	6.68279	HepG2	PPIG
chr14	39748546	39748558	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.50872	6.16610	HepG2	UCHL5
chr14	39716480	39716641	+	CDS	3.82280	6.18214	HepG2	GRWD1
chr14	39819343	39819444	+	CDS,intron-Distal	3.87935	11.12199	HepG2	PABPN1
chr14	39736696	39736738	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.37659	18.68319	HepG2	HNRNPM
chr14	39746594	39746671	+	intron-Distal	5.49008	11.27936	HepG2	ILF3
chr14	39793098	39793146	+	intron-Distal	3.04250	4.65228	HepG2	KHSRP
chr14	39736023	39736094	+	intron-Distal	3.28807	8.21779	HepG2	FKBP4
chr14	39770217	39770278	+	intron-Distal	4.19441	19.77984	HepG2	HNRNPL
chr14	39799748	39799810	+	intron-Distal	3.92689	4.63118	HepG2	HNRNPM
chr14	39736382	39736440	+	5'-UTR,intron-Distal,intron-Proximal	3.65246	5.35412	HepG2	POLR2G
chr14	39736746	39736799	+	intron-Distal,intron-Proximal	5.75361	15.27719	HepG2	EXOSC5
chr14	39743500	39743525	+	intron-Distal	4.01186	8.92112	HepG2	HNRNPM
chr14	39742562	39742619	+	intron-Distal	3.03183	5.94437	HepG2	POLR2G
chr14	39735882	39735934	+	intron-Distal	4.50074	16.30075	HepG2	SRSF9
chr14	39736606	39736641	+	5'-UTR,intron-Distal	3.61256	19.50696	HepG2	HNRNPM
chr14	39736465	39736507	+	5'-UTR,intron-Distal,intron-Proximal	4.15215	4.75920	HepG2	FKBP4
chr14	39736696	39736744	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.54511	9.82147	HepG2	BCCIP
chr14	39736319	39736349	+	5'-UTR,intron-Distal	3.43948	7.45842	HepG2	HNRNPM
chr14	39736027	39736099	+	intron-Distal	3.16648	6.11001	HepG2	SRSF1
chr14	39736909	39736964	+	intron-Distal	4.69651	15.43131	HepG2	BCCIP
chr14	39736792	39736812	+	intron-Distal,intron-Proximal	3.26415	14.11828	HepG2	HNRNPM
chr14	39742504	39742541	+	intron-Distal	3.21406	8.49074	HepG2	HNRNPM
chr14	39740800	39740873	+	intron-Distal	3.73644	3.35727	HepG2	FUS
chr14	39736846	39736922	+	intron-Distal	4.04124	10.74050	HepG2	EXOSC5
chr14	39735946	39735976	+	intron-Distal	4.18974	17.17407	HepG2	NCBP2
chr14	39735878	39735946	+	intron-Distal	3.76289	29.75019	HepG2	NCBP2
chr14	39737329	39737376	+	intron-Distal	3.23740	4.05123	HepG2	EXOSC5
chr14	39752818	39752884	+	intron-Distal	3.55146	4.61322	HepG2	MATR3
chr14	39752342	39752445	+	intron-Distal	4.61615	3.97018	HepG2	HNRNPM
chr14	39743718	39743741	+	intron-Distal	3.25311	4.20022	HepG2	ILF3
chr14	39742567	39742593	+	intron-Distal	4.75924	45.15932	HepG2	HNRNPM
chr14	39773915	39774036	+	intron-Distal	5.03593	13.37991	HepG2	KHSRP
chr14	39737749	39737807	+	intron-Distal	3.21670	8.22881	HepG2	HNRNPM
chr14	39759983	39760091	+	intron-Distal	3.91964	9.27053	HepG2	HNRNPM
chr14	39812228	39812278	+	intron-Distal	3.66329	5.42334	HepG2	QKI
chr14	39797827	39797911	+	intron-Distal	3.61167	4.10380	HepG2	MATR3
chr14	39737351	39737422	+	intron-Distal	3.89997	22.28194	HepG2	HNRNPM
chr14	39742593	39742615	+	intron-Distal	4.90105	47.34525	HepG2	HNRNPM
chr14	39744925	39744966	+	intron-Distal	3.49060	8.56398	HepG2	U2AF2
chr14	39736535	39736564	+	5'-UTR,intron-Distal	3.84542	11.78683	HepG2	HNRNPM
chr14	39743116	39743164	+	intron-Distal	5.28154	35.22550	HepG2	HNRNPM
chr14	39765239	39765294	+	intron-Distal	3.88121	3.54208	HepG2	SUGP2
chr14	39743376	39743427	+	intron-Distal	4.94787	23.60588	HepG2	HNRNPM
chr14	39744873	39744927	+	intron-Distal	3.29913	7.19888	HepG2	SFPQ
chr14	39800011	39800053	+	intron-Distal	3.11892	4.46039	HepG2	MATR3
chr14	39740120	39740157	+	intron-Distal	3.62716	5.42728	HepG2	HNRNPM
chr14	39759392	39759433	+	intron-Distal	4.75044	5.01910	HepG2	MATR3
chr14	39782173	39782231	+	intron-Distal	3.66329	3.64762	HepG2	QKI
chr14	39735934	39735997	+	intron-Distal	5.22271	13.30815	HepG2	SRSF9
chr14	39736819	39736869	+	intron-Distal,intron-Proximal	3.81706	22.54493	HepG2	HNRNPM
chr14	39794623	39794638	+	intron-Distal	3.10540	8.72471	HepG2	HNRNPC
chr14	39736459	39736570	+	5'-UTR,intron-Distal,intron-Proximal	3.00752	24.07091	HepG2	DDX3X
chr14	39721992	39722114	+	CDS,intron-Distal	5.35982	24.61729	HepG2	BCLAF1
chr14	39737604	39737637	+	intron-Distal	6.03396	13.69104	HepG2	HNRNPM
chr14	39738736	39738746	+	intron-Distal	3.11979	15.22924	HepG2	HNRNPC
chr14	39800331	39800383	+	intron-Distal	4.52201	5.37222	HepG2	MATR3
chr14	39736058	39736103	+	intron-Distal	3.43020	6.23662	HepG2	NCBP2
chr14	39748793	39748873	+	intron-Distal,intron-Proximal	4.74007	5.34107	HepG2	KHSRP
chr14	39736044	39736074	+	intron-Distal	4.66628	15.74227	HepG2	AQR
chr14	39801689	39801728	+	intron-Distal	4.11818	3.86809	HepG2	SUGP2
chr14	39739966	39740038	+	intron-Distal	4.98906	9.77080	HepG2	HNRNPM
chr14	39728748	39728820	+	intron-Distal	3.55803	3.46325	HepG2	SUGP2
chr14	39740195	39740263	+	intron-Distal	3.03039	4.94108	HepG2	HNRNPM
chr14	39753317	39753497	+	intron-Distal	3.37163	6.23804	HepG2	HNRNPM
chr14	39736869	39736909	+	intron-Distal	4.72570	26.15608	HepG2	HNRNPM
chr14	39746671	39746711	+	intron-Distal	4.11825	4.36866	HepG2	ILF3
chr14	39742993	39743054	+	intron-Distal	4.62904	23.48798	HepG2	HNRNPM
chr14	39793314	39793415	+	intron-Distal	3.30962	10.70695	HepG2	KHSRP
chr14	39773703	39773808	+	intron-Distal	4.24556	14.73782	HepG2	KHSRP
chr14	39739871	39739916	+	intron-Distal	3.01284	8.29439	HepG2	HNRNPM
chr14	39800735	39800792	+	intron-Distal	3.50864	3.39857	HepG2	HNRNPM
chr14	39818203	39818327	+	intron-Distal,intron-Proximal	4.43603	5.45972	HepG2	TIAL1
chr14	39753184	39753216	+	intron-Distal	3.21209	3.84025	HepG2	SUGP2
chr14	39748902	39748950	+	intron-Distal	4.37976	5.42334	HepG2	QKI
chr14	39753393	39753518	+	intron-Distal	3.45432	8.80382	HepG2	SUGP2
chr14	39736909	39736958	+	intron-Distal	4.24913	61.95833	HepG2	HNRNPM
chr14	39801117	39801190	+	intron-Distal	3.25173	4.97747	HepG2	MATR3
chr14	39784346	39784394	+	intron-Distal	3.87496	6.35686	HepG2	PABPN1
chr14	39793016	39793086	+	intron-Distal	3.08139	12.64562	HepG2	U2AF2
chr14	39740341	39740401	+	intron-Distal	4.76868	14.82190	HepG2	HNRNPM
chr14	39736744	39736816	+	intron-Distal,intron-Proximal	3.77920	13.54981	HepG2	BCCIP
chr14	39744727	39744807	+	intron-Distal	3.80380	10.19216	HepG2	HNRNPM
chr14	39753627	39753707	+	intron-Distal	3.86967	5.78794	HepG2	SUGP2
chr14	39743696	39743718	+	intron-Distal	3.22589	4.20022	HepG2	ILF3
chr14	39743080	39743116	+	intron-Distal	4.39242	13.50894	HepG2	HNRNPM
chr14	39801116	39801182	+	intron-Distal	3.83897	5.78794	HepG2	SUGP2
chr14	39790976	39791025	+	intron-Distal	3.17070	5.56519	HepG2	HNRNPC
chr14	39736743	39736792	+	intron-Distal,intron-Proximal	4.52252	33.57310	HepG2	HNRNPM
chr14	39785472	39785593	+	intron-Distal	4.37976	9.10156	HepG2	QKI
chr14	39789885	39789920	+	intron-Distal	3.32389	8.80115	HepG2	U2AF2
chr14	39751349	39751400	+	intron-Distal	3.08206	4.23271	HepG2	HNRNPM
chr14	39794592	39794623	+	intron-Distal	3.21600	10.21446	HepG2	HNRNPC
chr14	39735898	39735959	+	intron-Distal	3.79654	18.98843	HepG2	DDX3X
chr14	39794586	39794592	+	intron-Distal	3.37139	6.72714	HepG2	HNRNPC
chr14	39737937	39738002	+	intron-Distal	3.71655	5.32704	HepG2	BCCIP
chr14	39801361	39801436	+	intron-Distal	3.78400	8.25026	HepG2	MATR3
chr14	39773700	39773806	+	intron-Distal	4.30526	3.02234	K562	KHSRP
chr14	39736708	39736758	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.19395	9.12574	HepG2	SRSF9
chr14	39736043	39736129	+	intron-Distal	3.09435	4.42484	HepG2	POLR2G
chr14	39745998	39746080	+	5'-UTR,intron-Distal,intron-Proximal	4.38197	13.72381	HepG2	KHSRP
chr14	39801770	39801820	+	intron-Distal	4.84351	7.65425	HepG2	SUGP2
chr14	39736367	39736445	+	5'-UTR,intron-Distal,intron-Proximal	4.38436	14.95739	HepG2	EXOSC5
chr14	39804145	39804294	+	intron-Distal	3.37567	4.04407	HepG2	ILF3
chr14	39742566	39742583	+	intron-Distal	3.05764	5.46232	HepG2	BCCIP
chr14	39802764	39802823	+	intron-Distal	3.28858	4.88763	HepG2	SUGP2
chr14	39736470	39736542	+	5'-UTR,intron-Distal,intron-Proximal	5.00013	13.86516	HepG2	EXOSC5
chr14	39735976	39736027	+	intron-Distal	3.18848	7.03549	HepG2	SRSF1
chr14	39738019	39738080	+	intron-Distal	3.65445	5.02340	HepG2	TAF15
chr14	39773824	39773915	+	intron-Distal	3.98797	4.79415	HepG2	KHSRP
chr14	39801873	39801933	+	intron-Distal	3.19993	6.59727	HepG2	SUGP2
chr14	39797822	39797909	+	intron-Distal	4.69993	5.84463	HepG2	SUGP2
chr14	39791167	39791218	+	intron-Distal	3.06996	4.34685	HepG2	HNRNPC
chr14	39793456	39793535	+	intron-Distal	3.76184	18.46781	HepG2	U2AF2
chr14	39721951	39721977	+	CDS,intron-Distal,intron-Proximal	4.52688	5.79432	HepG2	BCLAF1
chr14	39754491	39754591	+	intron-Distal	4.48593	3.67126	HepG2	NKRF
chr14	39770278	39770351	+	intron-Distal	3.82038	12.13893	HepG2	HNRNPL
chr14	39776618	39776686	+	intron-Distal	3.18896	5.18371	HepG2	HNRNPC
chr14	39760503	39760558	+	intron-Distal	3.11053	4.40947	HepG2	KHSRP
chr14	39774744	39774822	+	intron-Distal	3.84390	9.18134	HepG2	U2AF2
chr14	39735885	39735901	+	intron-Distal	3.47511	7.81383	HepG2	SRSF1
chr14	39801864	39801927	+	intron-Distal	4.93173	6.43853	HepG2	MATR3
chr14	39773103	39773191	+	intron-Distal	3.88143	3.82697	HepG2	HNRNPC
chr14	39784191	39784278	+	intron-Distal	4.06202	7.97087	HepG2	XPO5
chr14	39739661	39739764	+	intron-Distal	3.91299	5.81715	HepG2	EXOSC5
chr14	39736074	39736109	+	intron-Distal	3.33802	5.75540	HepG2	AQR
chr14	39736700	39736708	+	5'-UTR,CDS,intron-Distal	3.34117	7.32240	HepG2	SRSF9
chr14	39751400	39751443	+	intron-Distal	3.55086	3.18845	HepG2	HNRNPM
chr14	39746991	39747039	+	intron-Distal	3.86096	6.87319	HepG2	ILF3
chr14	39736675	39736746	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.28026	19.03085	HepG2	EXOSC5
chr14	39739935	39739966	+	intron-Distal	3.76593	8.25342	HepG2	HNRNPM
chr14	39742961	39742982	+	intron-Distal	4.05908	8.65817	HepG2	HNRNPM
chr14	39802584	39802652	+	intron-Distal	3.46857	7.03905	HepG2	SUGP2
chr14	39735976	39735995	+	intron-Distal	5.17092	7.49410	HepG2	NCBP2
chr14	39802965	39803006	+	intron-Distal	3.29625	4.08528	HepG2	SUGP2
chr14	39747584	39747651	+	intron-Distal	4.35487	3.41738	HepG2	PTBP1
chr14	39738037	39738100	+	intron-Distal	3.39979	8.57165	HepG2	HNRNPM
chr14	39770246	39770334	+	intron-Distal	3.13344	3.14777	HepG2	GTF2F1
chr14	39740273	39740317	+	intron-Distal	3.96680	10.19216	HepG2	HNRNPM
chr14	39735840	39735869	+	intron-Distal	3.90568	3.01533	HepG2	SRSF1
chr14	39737807	39737836	+	intron-Distal	4.77496	23.05757	HepG2	HNRNPM
chr14	39760812	39760877	+	intron-Distal	4.07581	11.25083	HepG2	U2AF2
chr14	39802411	39802491	+	intron-Distal	3.36821	7.32436	HepG2	SUGP2
chr14	39735954	39735976	+	intron-Distal	3.29082	6.63620	HepG2	SRSF1
chr14	39737836	39737868	+	intron-Distal	4.84210	18.69670	HepG2	HNRNPM
chr14	39736311	39736358	+	5'-UTR,intron-Distal	3.56572	5.61874	HepG2	STAU2
chr14	39799749	39799822	+	intron-Distal	4.44203	9.55684	HepG2	SUGP2
chr14	39800011	39800057	+	intron-Distal	4.19180	5.95943	HepG2	HNRNPM
chr14	39741826	39741915	+	intron-Distal	3.19519	7.46003	HepG2	ILF3
chr14	39735994	39736044	+	intron-Distal	6.09913	34.82134	HepG2	AQR
chr14	39737042	39737074	+	intron-Distal	4.69477	6.97031	HepG2	BCCIP
chr14	39736696	39736727	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.30143	4.75864	HepG2	DDX3X
chr14	39793086	39793158	+	intron-Distal	3.77305	14.01827	HepG2	U2AF2
chr14	39743164	39743203	+	intron-Distal	4.38633	16.00317	HepG2	HNRNPM
chr14	39818796	39818843	+	intron-Distal	4.46040	10.75955	HepG2	U2AF2
chr14	39740501	39740546	+	intron-Distal	3.30932	8.14929	HepG2	HNRNPM
chr14	39778938	39778995	+	intron-Distal	3.40886	3.16095	HepG2	U2AF2
chr14	39800155	39800191	+	intron-Distal	4.79780	6.25174	HepG2	MATR3
chr14	39737488	39737543	+	intron-Distal	4.50290	19.96690	HepG2	HNRNPM
chr14	39790283	39790347	+	intron-Distal,intron-Proximal	3.21955	3.47089	HepG2	TIAL1
chr14	39790288	39790334	+	intron-Distal,intron-Proximal	3.55623	9.36850	HepG2	U2AF2
chr14	39795971	39796014	+	intron-Proximal	4.31945	4.29306	HepG2	KHSRP
chr14	39771453	39771482	+	intron-Proximal	5.10388	4.68690	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-407N17.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-407N17.3 is not available on ENCORE database.
76 RBPs can affect the levels of RP11-407N17.3.

The Knockdown/knockout RNA-Seq assay for RP11-407N17.3 is not available on ENCORE database.

76 RBPs can affect the gene expression of RP11-407N17.3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-407N17.3	ENSG00000258941.2	155.50870	439.08590	-1.49750	3.55590	2.88180	HepG2	ACO1
RP11-407N17.3	ENSG00000258941.2	285.12450	455.64400	-0.67630	3.04730	2.00430	HepG2	ADAR
RP11-407N17.3	ENSG00000258941.2	307.85140	748.29480	-1.28140	14.35310	13.23980	HepG2	AKAP1
RP11-407N17.3	ENSG00000258941.2	973.83160	619.16160	0.65330	4.96960	3.93100	HepG2	ASCC1
RP11-407N17.3	ENSG00000258941.2	188.51410	348.56870	-0.88680	2.64930	1.73450	HepG2	BCCIP
RP11-407N17.3	ENSG00000258941.2	650.97770	302.80240	1.10410	9.88330	8.31760	HepG2	BCLAF1
RP11-407N17.3	ENSG00000258941.2	327.74760	233.56900	0.48860	2.36450	1.80640	HepG2	BOP1
RP11-407N17.3	ENSG00000258941.2	857.14290	390.48800	1.13420	19.92630	18.20530	HepG2	CALR
RP11-407N17.3	ENSG00000258941.2	1289.99100	588.24280	1.13280	17.99890	16.24170	HepG2	CIRBP
RP11-407N17.3	ENSG00000258941.2	723.76190	439.22850	0.72040	3.20740	2.50140	HepG2	CKAP4
RP11-407N17.3	ENSG00000258941.2	381.55910	214.41910	0.83140	5.88320	4.91380	HepG2	CPSF6
RP11-407N17.3	ENSG00000258941.2	303.86250	467.28670	-0.62090	2.37610	1.43680	HepG2	YBX3
RP11-407N17.3	ENSG00000258941.2	544.67090	343.39100	0.66540	4.07340	2.31390	HepG2	CSTF2T
RP11-407N17.3	ENSG00000258941.2	378.46930	593.55520	-0.64920	2.96070	2.29980	HepG2	CELF1
RP11-407N17.3	ENSG00000258941.2	851.38250	369.60660	1.20370	19.19500	17.60500	HepG2	DDX21
RP11-407N17.3	ENSG00000258941.2	714.29950	361.92730	0.98070	13.39940	11.46080	HepG2	DDX24
RP11-407N17.3	ENSG00000258941.2	431.38130	259.50400	0.73310	3.39990	1.85010	HepG2	DDX28
RP11-407N17.3	ENSG00000258941.2	1283.95160	716.83230	0.84080	6.53120	5.61160	HepG2	DDX3X
RP11-407N17.3	ENSG00000258941.2	588.58450	425.40710	0.46830	3.21450	1.82400	HepG2	DDX47
RP11-407N17.3	ENSG00000258941.2	517.07690	388.49640	0.41240	2.30890	1.38620	HepG2	DDX5
RP11-407N17.3	ENSG00000258941.2	378.25300	615.72090	-0.70290	5.04290	4.23110	HepG2	DDX6
RP11-407N17.3	ENSG00000258941.2	1025.97990	420.14780	1.28790	7.20060	6.20520	HepG2	DKC1
RP11-407N17.3	ENSG00000258941.2	579.85450	395.86270	0.55060	2.11310	1.30650	HepG2	EEF2
RP11-407N17.3	ENSG00000258941.2	605.29170	340.55510	0.82960	6.47420	4.79780	HepG2	AGO1
RP11-407N17.3	ENSG00000258941.2	1070.69880	591.95990	0.85490	9.78730	8.71290	HepG2	EIF2S1
RP11-407N17.3	ENSG00000258941.2	576.28460	349.19310	0.72270	7.23440	5.62710	HepG2	EIF3G
RP11-407N17.3	ENSG00000258941.2	1105.83690	654.21070	0.75720	7.22850	6.19570	HepG2	EIF4A3
RP11-407N17.3	ENSG00000258941.2	920.45000	636.91740	0.53110	3.06650	2.34530	HepG2	EIF4B
RP11-407N17.3	ENSG00000258941.2	958.35530	629.63860	0.60590	3.79980	2.84680	HepG2	EIF4G1
RP11-407N17.3	ENSG00000258941.2	866.65680	603.15080	0.52280	2.82290	2.00210	HepG2	EIF4G2
RP11-407N17.3	ENSG00000258941.2	497.87550	214.80730	1.21260	5.64670	4.19830	HepG2	FTO
RP11-407N17.3	ENSG00000258941.2	577.74640	391.55870	0.56110	4.41790	3.43850	HepG2	FUBP3
RP11-407N17.3	ENSG00000258941.2	1014.70690	649.96290	0.64250	6.06440	4.73660	HepG2	G3BP2
RP11-407N17.3	ENSG00000258941.2	608.87580	243.03370	1.32490	12.59210	11.32040	HepG2	GPKOW
RP11-407N17.3	ENSG00000258941.2	626.54020	463.15700	0.43580	1.99210	1.43330	HepG2	HNRNPA1
RP11-407N17.3	ENSG00000258941.2	827.37840	515.21510	0.68330	5.20410	4.27650	HepG2	HNRNPC
RP11-407N17.3	ENSG00000258941.2	377.60960	581.34630	-0.62250	7.21240	6.17060	HepG2	HNRNPL
RP11-407N17.3	ENSG00000258941.2	1143.17070	231.93400	2.30120	35.51380	33.65580	HepG2	HNRNPLL
RP11-407N17.3	ENSG00000258941.2	816.56770	622.38560	0.39170	2.42120	1.78420	HepG2	IGF2BP2
RP11-407N17.3	ENSG00000258941.2	238.74750	727.22930	-1.60690	15.95710	13.99850	HepG2	LARP4
RP11-407N17.3	ENSG00000258941.2	382.61960	663.93210	-0.79510	2.68450	2.06230	HepG2	MATR3
RP11-407N17.3	ENSG00000258941.2	511.86320	632.83900	-0.30610	2.00110	1.34970	HepG2	NOL12
RP11-407N17.3	ENSG00000258941.2	463.83720	205.67350	1.17320	11.45110	10.02130	HepG2	NSUN2
RP11-407N17.3	ENSG00000258941.2	859.99770	566.07570	0.60320	2.93840	2.31610	HepG2	PCBP1
RP11-407N17.3	ENSG00000258941.2	993.41540	511.07660	0.95880	6.29070	4.77720	HepG2	PCBP2
RP11-407N17.3	ENSG00000258941.2	1066.27400	264.19360	2.01280	37.77990	35.38130	HepG2	PRPF8
RP11-407N17.3	ENSG00000258941.2	1000.84000	576.08920	0.79670	7.93910	7.11000	HepG2	PTBP1
RP11-407N17.3	ENSG00000258941.2	1247.29650	640.81780	0.96070	18.19730	16.57380	HepG2	PUM2
RP11-407N17.3	ENSG00000258941.2	1361.15110	447.27230	1.60550	15.30140	14.05980	HepG2	PUS1
RP11-407N17.3	ENSG00000258941.2	712.89920	493.38100	0.53090	2.17940	1.54740	HepG2	RAVER1
RP11-407N17.3	ENSG00000258941.2	350.00680	812.49920	-1.21500	23.40270	22.19230	HepG2	RBM22
RP11-407N17.3	ENSG00000258941.2	902.57430	566.14930	0.67280	6.18760	5.21590	HepG2	RBM25
RP11-407N17.3	ENSG00000258941.2	848.78200	641.06050	0.40480	1.90950	1.44130	HepG2	NELFE
RP11-407N17.3	ENSG00000258941.2	941.21200	597.19040	0.65620	5.72610	4.87930	HepG2	RECQL
RP11-407N17.3	ENSG00000258941.2	967.76290	499.96590	0.95270	8.92370	7.51530	HepG2	RPS3A
RP11-407N17.3	ENSG00000258941.2	487.83110	261.32100	0.90050	5.69520	4.60600	HepG2	RRP9
RP11-407N17.3	ENSG00000258941.2	758.05060	229.55310	1.72340	13.43340	11.99800	HepG2	SF3B1
RP11-407N17.3	ENSG00000258941.2	244.97560	531.45850	-1.11730	5.93340	5.04690	HepG2	SMN1
RP11-407N17.3	ENSG00000258941.2	1891.07800	625.94580	1.59500	19.64080	18.62290	HepG2	SRSF1
RP11-407N17.3	ENSG00000258941.2	505.80560	287.60870	0.81440	5.08120	4.18300	HepG2	SRSF7
RP11-407N17.3	ENSG00000258941.2	1665.32800	796.79510	1.06340	3.58910	3.02180	HepG2	SSB
RP11-407N17.3	ENSG00000258941.2	705.72040	461.02730	0.61410	2.87480	1.64920	HepG2	SUB1
RP11-407N17.3	ENSG00000258941.2	711.09480	341.14550	1.05960	1.88000	1.30810	HepG2	SUPV3L1
RP11-407N17.3	ENSG00000258941.2	927.34760	562.79920	0.72040	4.07390	3.41390	HepG2	TAF15
RP11-407N17.3	ENSG00000258941.2	578.49260	226.13580	1.35500	10.10180	8.84390	HepG2	TARDBP
RP11-407N17.3	ENSG00000258941.2	991.86800	516.95040	0.94000	11.28220	9.62770	HepG2	TIA1
RP11-407N17.3	ENSG00000258941.2	638.83340	497.17050	0.36160	1.97770	1.53990	HepG2	TIAL1
RP11-407N17.3	ENSG00000258941.2	113.19070	201.48260	-0.83190	3.10760	2.30520	HepG2	UCHL5
RP11-407N17.3	ENSG00000258941.2	667.50590	522.20110	0.35410	2.89630	1.82760	HepG2	UTP18
RP11-407N17.3	ENSG00000258941.2	233.24830	490.49450	-1.07240	13.59060	12.41230	HepG2	UTP3
RP11-407N17.3	ENSG00000258941.2	649.82480	447.84420	0.53700	3.04680	1.89010	HepG2	XPO5
RP11-407N17.3	ENSG00000258941.2	663.10650	558.74860	0.24690	1.88800	1.41290	HepG2	ZNF622
RP11-407N17.3	ENSG00000258941.2	0.00000	12.05510	-99999.99999	3.55740	2.32590	K562	CNOT7
RP11-407N17.3	ENSG00000258941.2	0.00000	11.02520	-99999.99999	3.01650	1.52510	K562	ILF2
RP11-407N17.3	ENSG00000258941.2	0.00000	11.58160	-99999.99999	3.32350	1.94930	K562	PABPC1
RP11-407N17.3	ENSG00000258941.2	11.23610	0.00000	99999.99990	3.10300	1.43900	K562	SERBP1
RP11-407N17.3	ENSG00000258941.2	0.00000	11.29440	-99999.99999	3.29590	1.37350	K562	SMN1
RP11-407N17.3	ENSG00000258941.2	9.00540	0.00000	99999.99990	2.68740	1.76670	K562	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-407N17.3 is not available on ENCORE database.

34 RBPs can affect the splicing of RP11-407N17.3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.15400	0.00000	0.00083	included	HepG2	G3BP1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.35900	0.00016	0.00469	included	K562	SRSF1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39725116	39725250			39722274	39722375	39746137	39746269	0.18300	0.00460	0.07094	included	HepG2	U2AF1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	-0.30600	0.00000	0.00000	excluded	HepG2	U2AF1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788391	39788495	39796067	39796226	0.15900	0.00013	0.06704	included	HepG2	DHX30
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.17200	0.00001	0.00430	included	HepG2	ILF3
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.21700	0.00006	0.05780	included	HepG2	TROVE2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.20000	0.00000	0.00000	included	HepG2	DKC1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.40800	0.00000	0.00000	included	HepG2	TBRG4
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.22400	0.00000	0.00000	included	HepG2	QKI
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	-0.31300	0.00000	0.00013	excluded	HepG2	U2AF2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.19100	0.00007	0.04680	included	HepG2	SUGP2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748540	39748562			39746137	39746269	39748652	39748741	-0.23800	0.00023	0.00347	excluded	K562	AQR
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.18600	0.00000	0.00000	included	HepG2	DDX3X
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	-0.25900	0.00000	0.00001	excluded	HepG2	UCHL5
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	-0.35700	0.00001	0.00026	excluded	K562	PUS1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39760222	39760300			39748652	39748741	39762474	39762585	-0.11700	0.00016	0.00368	excluded	K562	PUS1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788389	39788495	39796067	39796226	0.25900	0.00000	0.00000	included	HepG2	NCBP2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.25300	0.00000	0.00005	included	HepG2	EFTUD2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.21600	0.00000	0.00000	included	HepG2	PTBP1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.29300	0.00023	0.02089	included	HepG2	FTO
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.29600	0.00000	0.00000	included	HepG2	MATR3
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	-0.36200	0.00007	0.00238	excluded	K562	U2AF1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788339	39788495	39796067	39796226	-0.15600	0.00002	0.00482	excluded	HepG2	DDX6
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.19900	0.00003	0.00691	included	HepG2	LARP4
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788389	39788495	39796067	39796226	-0.16000	0.00027	0.02389	excluded	HepG2	HNRNPL
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.20800	0.00000	0.00051	included	HepG2	PPIG
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.23000	0.00000	0.00000	included	HepG2	XPO5
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.29300	0.00000	0.00000	included	HepG2	SRSF1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.15500	0.00004	0.00247	included	HepG2	SF3A3
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748540	39748562			39746137	39746269	39748652	39748741	-0.05400	0.00000	0.00003	excluded	HepG2	SF3A3
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.17900	0.00000	0.00000	included	HepG2	SSB
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.17100	0.00000	0.00037	included	HepG2	IGF2BP3
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788391	39788495	39796067	39796226	0.14800	0.00017	0.01795	included	HepG2	TIAL1
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.35900	0.00015	0.03357	included	K562	EIF4G2
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.23200	0.00000	0.00000	included	HepG2	SF3B4
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748540	39748562			39746137	39746269	39748652	39748741	-0.05100	0.00000	0.00024	excluded	HepG2	SF3B4
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788391	39788495	39796067	39796226	0.18300	0.00002	0.00214	included	HepG2	HNRNPU
SE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790131	39790260			39788412	39788495	39796067	39796226	0.14200	0.00037	0.07428	included	HepG2	PRPF4
A3SS	RP11-407N17.3	ENSG00000258941.2	chr14	+	39790086	39790260			39790131	39790260	39788412	39788495	0.21800	0.00303	0.01862	longer	K562	AQR
A3SS	RP11-407N17.3	ENSG00000258941.2	chr14	+	39817946	39818181			39817989	39818181	39816916	39816975	-0.26100	0.00000	0.00000	shorter	HepG2	U2AF1
A5SS	RP11-407N17.3	ENSG00000258941.2	chr14	+	39760222	39760315			39760222	39760300	39762474	39762585	0.06800	0.00163	0.09664	longer	HepG2	SF3A3
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39788412	39788495	39790131	39790260	39787147	39787215	39796067	39796226	0.22200	0.00000	0.00000	1included	HepG2	U2AF1
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748652	39748741	39760222	39760300	39746137	39746269	39762474	39762585	0.25600	0.00130	0.02511	1included	K562	PUS1
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39788412	39788495	39790131	39790260	39787147	39787215	39796067	39796226	-0.17300	0.00006	0.01692	2included	HepG2	EFTUD2
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748652	39748741	39760222	39760300	39746137	39746269	39762474	39762585	0.13400	0.00000	0.00023	1included	HepG2	SF3A3
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39746137	39746269	39748540	39748562	39722274	39722375	39748652	39748741	0.18100	0.00064	0.02674	1included	HepG2	SF3A3
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748652	39748741	39760222	39760300	39746137	39746269	39762474	39762585	0.08200	0.00185	0.01364	1included	HepG2	U2AF2
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748652	39748741	39760222	39760315	39746137	39746269	39762474	39762585	0.58900	0.00572	0.03385	1included	HepG2	U2AF2
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39777652	39777791	39782543	39782645	39773494	39773585	39783942	39784003	0.05700	0.00278	0.01892	1included	HepG2	U2AF2
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39748652	39748741	39760222	39760300	39746137	39746269	39762474	39762585	0.05500	0.00168	0.05466	1included	HepG2	SF3B4
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39777652	39777791	39782543	39782645	39773494	39773585	39783942	39784003	0.08600	0.00001	0.00050	1included	HepG2	HNRNPUL1
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39788389	39788495	39790131	39790260	39787147	39787215	39796067	39796226	-0.26700	0.00000	0.00000	2included	HepG2	NCBP2
MXE	RP11-407N17.3	ENSG00000258941.2	chr14	+	39788412	39788495	39790131	39790260	39787147	39787215	39796067	39796226	-0.15100	0.00001	0.00061	2included	HepG2	NCBP2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-407N17.3

General Information

Functions

Localization

Domains (AlphaFold: RP11-407N17.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-407N17.3 is not avaliable on ENCORE database.

50 proteins are bound to RP11-407N17.3 RNA:

eCLIP assay for RP11-407N17.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-407N17.3 is not available on ENCORE database.

76 RBPs can affect the gene expression of RP11-407N17.3 :

The Knockdown/knockout RNA-Seq assay for RP11-407N17.3 is not available on ENCORE database.

34 RBPs can affect the splicing of RP11-407N17.3 :

The Knockdown/knockout RNA-Seq assay for RP11-407N17.3 is not avaliable on ENCORE database.