NBEAL2

General Information

Gene Name : NBEAL2
Gene ID : ENSG00000160796.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NBEAL2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NBEAL2	ENSG00000160796.16	10.37	28.18	19.27	ENCSR000AEF
HepG2	NBEAL2	ENSG00000160796.16	24.69	13.04	18.87	ENCSR985KAT
K562	NBEAL2	ENSG00000160796.16	44.85	31.24	38.05	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NBEAL2 is not avaliable on ENCORE database.

Proteins bound to RNA

NBEAL2 RNA is bound by 29 proteins.

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eCLIP assay for NBEAL2 is not avaliable on ENCORE database.

29 proteins are bound to NBEAL2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	47033450	47033480	+	intron-Proximal	5.62583	47.89150	K562	AQR
chr3	47048953	47049027	+	CDS,intron-Distal,intron-Proximal	5.66723	33.44555	K562	SF3B4
chr3	47046215	47046403	+	intron-Distal,intron-Proximal	4.96217	32.07041	K562	HNRNPK
chr3	47040438	47040499	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.10310	31.32476	K562	DDX24
chr3	47033435	47033438	+	5'-UTR,CDS,intron-Proximal	5.35334	30.29678	K562	AQR
chr3	47041910	47041939	+	intron-Proximal	7.27704	29.68635	K562	AQR
chr3	47046442	47046495	+	CDS,intron-Distal,intron-Proximal	5.68948	24.22078	K562	DDX24
chr3	47046674	47046729	+	3'-UTR,CDS	4.54373	23.29246	K562	DDX24
chr3	47041898	47041910	+	intron-Proximal	6.94536	23.09753	K562	AQR
chr3	47041893	47041898	+	3'-UTR,CDS,intron-Proximal	6.88410	22.27579	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 190 entries

eCLIP assay for NBEAL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NBEAL2 is not available on ENCORE database.
119 RBPs can affect the levels of NBEAL2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NBEAL2 is not available on ENCORE database.

119 RBPs can affect the gene expression of NBEAL2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NBEAL2	ENSG00000160796.12	1647.67470	476.02470	1.79120	78.06340	75.78050	HepG2	SF3B4
NBEAL2	ENSG00000160796.12	1554.81900	508.89180	1.61120	61.06710	59.32070	HepG2	NELFE
NBEAL2	ENSG00000160796.12	2068.50880	866.63210	1.25500	58.04370	55.89140	HepG2	SUCLG1
NBEAL2	ENSG00000160796.12	2051.01620	946.19410	1.11600	46.11230	44.38860	HepG2	ACO1
NBEAL2	ENSG00000160796.12	1711.19100	819.28500	1.06250	43.46380	41.68880	HepG2	PUM1
NBEAL2	ENSG00000160796.12	2082.25550	914.04620	1.18770	30.88800	27.78380	K562	SF3B4
NBEAL2	ENSG00000160796.12	986.91370	457.29930	1.10970	25.80340	24.45800	HepG2	PTBP1
NBEAL2	ENSG00000160796.12	1462.06890	762.02700	0.94000	25.74490	24.10810	HepG2	SRSF5
NBEAL2	ENSG00000160796.12	1360.82460	681.27620	0.99810	25.00480	23.38500	HepG2	SMN1
NBEAL2	ENSG00000160796.12	970.78610	496.90060	0.96610	20.19150	19.16130	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 142 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NBEAL2 is not available on ENCORE database.

20 RBPs can affect the splicing of NBEAL2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NBEAL2	ENSG00000160796.12	chr3	+	47033964	47034045			47033329	47033436	47035426	47035510	0.43800	0.00000	0.00000	included	HepG2	U2AF2
SE	NBEAL2	ENSG00000160796.12	chr3	+	47048555	47048645			47047808	47047939	47048730	47048840	0.05500	0.00000	0.00024	included	K562	GPKOW
SE	NBEAL2	ENSG00000160796.12	chr3	+	47048555	47048645			47047822	47047939	47048730	47048840	-0.16100	0.00000	0.00013	excluded	K562	TARDBP
RI	NBEAL2	ENSG00000160796.12	chr3	+	47048730	47049187			47048730	47048840	47049014	47049187	0.43900	0.00000	0.00006	included	K562	U2AF2
MXE	NBEAL2	ENSG00000160796.12	chr3	+	47047654	47047752	47047822	47047939	47047435	47047553	47048730	47048840	-0.10800	0.00000	0.00017	2included	K562	TARDBP
SE	NBEAL2	ENSG00000160796.12	chr3	+	47033964	47034045			47033329	47033436	47035365	47035510	-0.78100	0.00001	0.00032	excluded	K562	AQR
A3SS	NBEAL2	ENSG00000160796.12	chr3	+	47040759	47040964			47040804	47040964	47040448	47040607	0.39300	0.00001	0.00171	longer	K562	FXR1
RI	NBEAL2	ENSG00000160796.12	chr3	+	47048730	47049187			47048730	47048840	47049014	47049187	-0.21000	0.00001	0.00410	excluded	K562	SMNDC1
SE	NBEAL2	ENSG00000160796.12	chr3	+	47048555	47048645			47047822	47047939	47048730	47048840	-0.08400	0.00002	0.00062	excluded	K562	HNRNPC
RI	NBEAL2	ENSG00000160796.12	chr3	+	47048730	47049187			47048730	47048840	47049014	47049187	0.25500	0.00002	0.00046	included	K562	EFTUD2

Showing 1 to 10 of 34 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NBEAL2

General Information

Functions

Localization

Domains (AlphaFold: NBEAL2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NBEAL2 is not avaliable on ENCORE database.

29 proteins are bound to NBEAL2 RNA:

eCLIP assay for NBEAL2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NBEAL2 is not available on ENCORE database.

119 RBPs can affect the gene expression of NBEAL2 :

The Knockdown/knockout RNA-Seq assay for NBEAL2 is not available on ENCORE database.

20 RBPs can affect the splicing of NBEAL2 :

The Knockdown/knockout RNA-Seq assay for NBEAL2 is not avaliable on ENCORE database.