HSPBP1

General Information

Gene Name       : HSPBP1
Gene ID             : ENSG00000133265.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HSPBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HSPBP1ENSG00000133265.100.764.902.83ENCSR000AEF
HepG2HSPBP1ENSG00000133265.1033.207.6320.42ENCSR985KAT
K562HSPBP1ENSG00000133265.1027.2614.6620.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HSPBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HSPBP1 RNA is bound by 8 proteins.  







eCLIP assay for HSPBP1 is not avaliable on ENCORE database.





8 proteins are bound to HSPBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195577380855773877-3'-UTR,intron-Distal,intron-Proximal4.137586.34623K562TROVE2
chr195577386355773958-3'-UTR,intron-Distal,intron-Proximal4.199347.71026K562PABPC4
chr195579100455791037-3'-UTR,5'-UTR,intron-Distal3.662965.57640K562YBX3
chr195579103755791056-3'-UTR,5'-UTR,intron-Distal4.534665.86108K562YBX3
chr195578917755789242-CDS,intron-Distal,intron-Proximal5.171966.23414HepG2BUD13
chr195579085055790936-CDS,intron-Distal,intron-Proximal5.573037.39121HepG2RPS3
chr195577766655777796-intron-Distal,intron-Proximal3.923173.46495K562TARDBP
chr195578201755782153-intron-Distal4.486685.30489K562TARDBP
chr195577772755777951-intron-Distal,intron-Proximal5.7235011.00212K562EXOSC5
chr195578203155782140-intron-Distal6.012219.02011K562EIF4G2
chr195578233155782395-intron-Distal5.233215.14653K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HSPBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HSPBP1 is not available on ENCORE database.

  • 81 RBPs can affect the levels of HSPBP1.  








The Knockdown/knockout RNA-Seq assay for HSPBP1 is not available on ENCORE database.





81 RBPs can affect the gene expression of HSPBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HSPBP1ENSG00000133265.6557.93120392.529400.507205.022904.25060HepG2ACO1
HSPBP1ENSG00000133265.6730.30470371.344500.975608.753307.86860HepG2AKAP1
HSPBP1ENSG00000133265.6487.85750323.240800.593804.219803.49870HepG2BOP1
HSPBP1ENSG00000133265.6149.36950257.28650-0.784501.961701.30380HepG2CALR
HSPBP1ENSG00000133265.6310.79500128.582101.273207.671006.40880HepG2CNOT7
HSPBP1ENSG00000133265.6206.86240296.75600-0.520602.259701.62980HepG2CPSF6
HSPBP1ENSG00000133265.6117.19120312.01800-1.4128015.3010014.03060HepG2CELF1
HSPBP1ENSG00000133265.6479.99550355.674500.432402.148801.59090HepG2DDX3X
HSPBP1ENSG00000133265.6521.66400305.638800.771202.795102.17430HepG2DDX6
HSPBP1ENSG00000133265.6125.36930215.22160-0.779603.515402.25770HepG2AGO1
HSPBP1ENSG00000133265.6544.12690675.28590-0.311602.488001.91350HepG2ETF1
HSPBP1ENSG00000133265.6239.27500329.24080-0.460502.356501.62790HepG2FUBP3
HSPBP1ENSG00000133265.6494.05240327.597300.592603.705802.91430HepG2FXR1
HSPBP1ENSG00000133265.6230.93000308.33890-0.417102.253601.40110HepG2HNRNPA2B1
HSPBP1ENSG00000133265.6437.31590305.634800.516803.620802.85610HepG2HNRNPL
HSPBP1ENSG00000133265.6221.96460321.03690-0.532402.504101.90080HepG2HNRNPLL
HSPBP1ENSG00000133265.6462.22160327.712400.496102.410501.79700HepG2MAGOH
HSPBP1ENSG00000133265.6538.17730329.521200.707604.692203.88760HepG2MATR3
HSPBP1ENSG00000133265.6541.93310337.262700.684104.735003.91930HepG2NCBP2
HSPBP1ENSG00000133265.6468.31320332.695400.493203.565202.69990HepG2NOL12
HSPBP1ENSG00000133265.6473.90640232.107301.029703.436002.20820HepG2NONO
HSPBP1ENSG00000133265.6152.57640284.65390-0.899705.172604.16330HepG2NSUN2
HSPBP1ENSG00000133265.6198.13080317.32300-0.679505.176704.15350HepG2PRPF4
HSPBP1ENSG00000133265.6505.90000337.120300.585503.537202.88360HepG2PUM1
HSPBP1ENSG00000133265.6355.29890230.535900.623902.404901.48770HepG2RBM27
HSPBP1ENSG00000133265.6315.79580187.207000.754303.465902.27940HepG2RCC2
HSPBP1ENSG00000133265.6233.89800129.212100.856004.046903.07820HepG2RPS3A
HSPBP1ENSG00000133265.6209.93790121.673100.786902.822601.49920HepG2SART3
HSPBP1ENSG00000133265.6321.00610239.679800.421402.533501.91380HepG2SMN1
HSPBP1ENSG00000133265.6163.98400353.57110-1.108406.350205.15410HepG2SNRNP70
HSPBP1ENSG00000133265.6467.67120313.557800.576704.998904.19710HepG2SRSF5
HSPBP1ENSG00000133265.6217.71140317.63500-0.545002.992402.42280HepG2SRSF9
HSPBP1ENSG00000133265.6355.32740553.42160-0.639207.270906.51560HepG2SSB
HSPBP1ENSG00000133265.6186.16530112.433300.727403.099601.93140HepG2STIP1
HSPBP1ENSG00000133265.6476.27720356.608100.417403.120102.46690HepG2SUCLG1
HSPBP1ENSG00000133265.6172.07430350.98570-1.028406.884606.06930HepG2TAF15
HSPBP1ENSG00000133265.6206.93920312.88720-0.596402.785602.05910HepG2TARDBP
HSPBP1ENSG00000133265.6450.11660310.253200.536803.550902.54760HepG2TUFM
HSPBP1ENSG00000133265.6439.73730323.667300.442003.112302.48340HepG2UTP3
HSPBP1ENSG00000133265.6215.18090115.741000.894604.472603.06840HepG2XPO5
HSPBP1ENSG00000133265.6402.57310247.468700.701902.720002.00110HepG2XRN2
HSPBP1ENSG00000133265.6884.81280653.134500.437904.626903.92610K562AGGF1
HSPBP1ENSG00000133265.6964.07120679.606000.504302.745002.09420K562AKAP8L
HSPBP1ENSG00000133265.6622.76110971.68840-0.641805.937805.13480K562AQR
HSPBP1ENSG00000133265.6640.98580471.960400.441503.937302.77790K562BCLAF1
HSPBP1ENSG00000133265.6494.82050742.32840-0.585205.809303.61720K562CEBPZ
HSPBP1ENSG00000133265.6343.69960470.62600-0.453402.935302.12780K562CPSF6
HSPBP1ENSG00000133265.6490.42390358.052300.453803.087901.96540K562CSTF2
HSPBP1ENSG00000133265.6816.862501409.10970-0.7866014.0090011.93530K562CELF1
HSPBP1ENSG00000133265.6740.36960902.78470-0.286102.566301.93560K562DDX47
HSPBP1ENSG00000133265.6885.51960731.368300.275802.078001.33020K562DKC1
HSPBP1ENSG00000133265.6642.58730418.989100.616903.097101.73790K562EEF2
HSPBP1ENSG00000133265.6277.75490175.504000.662203.891202.95680K562EIF3G
HSPBP1ENSG00000133265.6544.92800392.381300.473704.001402.40190K562EWSR1
HSPBP1ENSG00000133265.6816.36290560.405800.542604.845303.70070K562FIP1L1
HSPBP1ENSG00000133265.6334.84780478.88760-0.516203.259502.32630K562FMR1
HSPBP1ENSG00000133265.6266.76050405.91650-0.605603.681602.61300K562FTO
HSPBP1ENSG00000133265.6629.15430467.469700.428402.392401.82210K562FXR1
HSPBP1ENSG00000133265.631.64560145.46250-2.2006010.640809.07840K562G3BP2
HSPBP1ENSG00000133265.6309.36050449.31670-0.538403.452602.56830K562GPKOW
HSPBP1ENSG00000133265.61055.18510759.742500.473804.142203.17500K562HSPD1
HSPBP1ENSG00000133265.6486.15080226.339001.102804.031902.69590K562IGF2BP2
HSPBP1ENSG00000133265.6520.48700237.688201.1307014.3265012.29570K562MAGOH
HSPBP1ENSG00000133265.6899.38790690.401500.381402.363701.39570K562MAK16
HSPBP1ENSG00000133265.6389.48290237.177900.715505.436004.08370K562MATR3
HSPBP1ENSG00000133265.6633.16780770.00480-0.282302.143801.42660K562MTPAP
HSPBP1ENSG00000133265.6624.04300399.081400.644903.895302.29920K562NONO
HSPBP1ENSG00000133265.6351.69130232.426900.597404.055302.40630K562PCBP1
HSPBP1ENSG00000133265.6622.62580999.06270-0.682203.662802.70350K562PCBP3
HSPBP1ENSG00000133265.6554.45040766.28000-0.466804.242003.24680K562POLR2G
HSPBP1ENSG00000133265.6954.20290636.221600.584705.668404.42190K562PPIG
HSPBP1ENSG00000133265.6460.87100230.942800.9967011.4468010.15710K562PTBP1
HSPBP1ENSG00000133265.61094.905501329.96200-0.280602.373901.39180K562PUM1
HSPBP1ENSG00000133265.6366.83950221.345400.728703.210102.29870K562RBM22
HSPBP1ENSG00000133265.6389.75050215.847000.852403.445801.84070K562RBM34
HSPBP1ENSG00000133265.6336.78440232.954300.531702.618401.55850K562NELFE
HSPBP1ENSG00000133265.6305.44680427.37170-0.484602.331801.44700K562SF3B1
HSPBP1ENSG00000133265.6224.37160151.117200.570102.788401.92970K562SF3B4
HSPBP1ENSG00000133265.6495.70850226.421801.1304011.9408010.47510K562SRSF1
HSPBP1ENSG00000133265.6364.41630213.889700.768603.742302.48650K562SRSF5
HSPBP1ENSG00000133265.6550.64520735.23670-0.417102.751001.39810K562SSRP1
HSPBP1ENSG00000133265.6956.90550768.647400.316002.157801.43200K562SYNCRIP
HSPBP1ENSG00000133265.6410.34030229.108800.840706.845805.68640K562TARDBP
HSPBP1ENSG00000133265.6486.00160221.013101.136707.779306.30040K562TIA1
HSPBP1ENSG00000133265.6467.14390216.985601.106206.215904.41920K562TRA2A
HSPBP1ENSG00000133265.6564.19400414.407900.445002.892601.92280K562TRIM56
HSPBP1ENSG00000133265.694.26380145.51310-0.626402.167801.45730K562U2AF2
HSPBP1ENSG00000133265.6766.02940907.15480-0.243902.035101.41280K562UPF1
HSPBP1ENSG00000133265.6580.20210776.22410-0.419903.411602.44250K562WDR3
HSPBP1ENSG00000133265.6634.52060807.18040-0.347203.581502.62650K562WDR43
HSPBP1ENSG00000133265.6578.33680411.036000.492503.031701.74580K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HSPBP1 is not available on ENCORE database.





3 RBPs can affect the splicing of HSPBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSHSPBP1ENSG00000133265.6chr19-5579076655791073557907665579107055791402557914760.137000.000000.00345longerHepG2RBM5
A3SSHSPBP1ENSG00000133265.6chr19-5577749855777674557774985577765455785765557859900.057000.000260.00206longerK562AQR
A3SSHSPBP1ENSG00000133265.6chr19-5577400755774160557740075577405055776645557767460.090000.000010.00011longerK562AQR
A3SSHSPBP1ENSG00000133265.6chr19-5579076655791073557907665579107055791402557914760.087000.000000.00433longerHepG2CDC40

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HSPBP1 is not avaliable on ENCORE database.