EFCAB14

General Information

Gene Name       : EFCAB14
Gene ID             : ENSG00000159658.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EFCAB14)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EFCAB14ENSG00000159658.1042.6339.6341.13ENCSR000AEF
HepG2EFCAB14ENSG00000159658.108.2815.7011.99ENCSR985KAT
K562EFCAB14ENSG00000159658.1028.5532.9530.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EFCAB14 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EFCAB14 RNA is bound by 20 proteins.  







eCLIP assay for EFCAB14 is not avaliable on ENCORE database.





20 proteins are bound to EFCAB14 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14714356647143618-3'-UTR,intron-Distal3.636044.40891K562FAM120A
chr14714414847144197-3'-UTR,CDS,intron-Distal3.458706.51044K562LIN28B
chr14714120047141292-3'-UTR,intron-Distal3.712849.20480K562IGF2BP2
chr14714185947141877-3'-UTR,intron-Distal3.432107.24994K562YBX3
chr14714279747142872-3'-UTR,intron-Distal4.271794.50986K562IGF2BP1
chr14712436447124410-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal6.0540220.86620K562TROVE2
chr14714401047144081-3'-UTR,intron-Distal,intron-Proximal3.022093.22526HepG2QKI
chr14714317747143248-3'-UTR,intron-Distal3.679295.02737K562IGF2BP2
chr14714183847141859-3'-UTR,intron-Distal3.8373610.75033K562YBX3
chr14714235447142407-3'-UTR,intron-Distal3.940313.08128K562IGF2BP1
chr14714362947143762-3'-UTR,intron-Distal3.9740629.26925K562PUM2
chr14714399247144077-3'-UTR,intron-Distal,intron-Proximal3.216943.57062K562IGF2BP1
chr14714377147143858-3'-UTR,intron-Distal,intron-Proximal4.1167618.49622K562PUM2
chr14714177747141826-3'-UTR,intron-Distal3.419559.30098K562YBX3
chr14714194747141999-3'-UTR,intron-Distal3.263614.23616K562TIA1
chr14714167447141711-3'-UTR,intron-Distal4.682997.23560K562PUM2
chr14714118847141289-3'-UTR,intron-Distal3.354378.66866K562IGF2BP1
chr14714215847142247-3'-UTR,intron-Distal5.0441524.78916K562PUM2
chr14714152947141601-3'-UTR,intron-Distal3.594317.39180K562TIA1
chr14714401647144104-3'-UTR,intron-Distal,intron-Proximal3.325416.39847K562QKI
chr14718415147184170-5'-UTR,intron-Distal3.671314.51666K562RBM15
chr14718459247184677-5'-UTR,intron-Distal5.3511912.37934HepG2DDX3X
chr14718470847184785-5'-UTR,intron-Distal,intron-Proximal4.419673.72434HepG2NCBP2
chr14718412847184151-5'-UTR,intron-Distal3.539793.63681K562RBM15
chr14718388647183979-5'-UTR,intron-Distal3.090625.95627K562RBM15
chr14718399747184063-5'-UTR,intron-Distal3.563444.68928K562RBM15
chr14718383947183875-5'-UTR,intron-Distal3.816063.15006K562RBM15
chr14718385747184077-5'-UTR,intron-Distal3.133287.53669HepG2QKI
chr14713093047130938-5'-UTR,CDS,intron-Distal6.5776717.27574K562TROVE2
chr14717356747173703-CDS,intron-Distal,intron-Proximal3.842627.28307HepG2BCLAF1
chr14717358147173682-CDS,intron-Distal3.975663.56019HepG2GRWD1
chr14718362747183676-CDS,intron-Distal3.877673.02850K562YBX3
chr14713092747130930-5'-UTR,CDS,intron-Distal,intron-Proximal6.5776717.27574K562TROVE2
chr14716222647162285-CDS,intron-Distal,intron-Proximal3.909557.70480K562YBX3
chr14715526147155351-CDS,intron-Distal,intron-Proximal4.094973.74511K562IGF2BP1
chr14715749447157523-CDS,intron-Distal,intron-Proximal3.202103.07653K562ZNF622
chr14715761547157688-intron-Distal,intron-Proximal3.886405.98773K562KHSRP
chr14713379347134026-5'-UTR,CDS,intron-Distal,intron-Proximal3.803565.14253HepG2GRWD1
chr14713379347133909-CDS,intron-Distal,intron-Proximal4.185766.67587HepG2DDX3X
chr14713079647130921-intron-Distal,intron-Proximal4.176913.85435K562PRPF8
chr14713390947134015-5'-UTR,CDS,intron-Distal,intron-Proximal5.1173813.13184HepG2DDX3X
chr14715768847157775-intron-Distal,intron-Proximal4.805268.06346K562KHSRP
chr14713391447133982-CDS,intron-Distal,intron-Proximal3.556153.59569K562FTO
chr14715897247159038-intron-Distal3.385063.72952K562EXOSC5
chr14715011447150143-intron-Distal,intron-Proximal4.066315.97994K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EFCAB14 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EFCAB14 is not available on ENCORE database.

  • 89 RBPs can affect the levels of EFCAB14.  








The Knockdown/knockout RNA-Seq assay for EFCAB14 is not available on ENCORE database.





89 RBPs can affect the gene expression of EFCAB14 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EFCAB14ENSG00000159658.6978.83460625.282700.646506.907505.29870HepG2AATF
EFCAB14ENSG00000159658.6635.07240852.90990-0.425503.029601.98920HepG2ADAR
EFCAB14ENSG00000159658.6888.28300643.552200.464902.979702.04560HepG2BCLAF1
EFCAB14ENSG00000159658.6648.143101169.73890-0.851808.423607.44870HepG2BOP1
EFCAB14ENSG00000159658.6767.901301355.62520-0.820007.722306.07500HepG2CCAR1
EFCAB14ENSG00000159658.61009.93660804.633000.327802.003501.33870HepG2CIRBP
EFCAB14ENSG00000159658.61165.63190821.838000.504102.593901.85440HepG2CNOT7
EFCAB14ENSG00000159658.6705.98030980.53090-0.473903.353202.67330HepG2DDX3X
EFCAB14ENSG00000159658.61914.803701219.500900.650803.706602.57870HepG2DDX59
EFCAB14ENSG00000159658.61095.57200842.203500.379302.208701.65090HepG2DDX6
EFCAB14ENSG00000159658.6687.67820858.82840-0.320602.708602.01040HepG2DNAJC21
EFCAB14ENSG00000159658.6717.80810851.26870-0.246002.230001.63210HepG2DNAJC2
EFCAB14ENSG00000159658.61118.71370809.722800.466203.498502.83640HepG2EIF2S1
EFCAB14ENSG00000159658.6728.07160978.34720-0.426305.251204.15790HepG2EIF4G1
EFCAB14ENSG00000159658.61953.459401243.291500.6518015.2644014.03510HepG2ETF1
EFCAB14ENSG00000159658.6855.57700657.523900.379802.828801.67240HepG2FASTKD2
EFCAB14ENSG00000159658.61665.263201249.161900.414702.853602.07180HepG2FIP1L1
EFCAB14ENSG00000159658.6820.81580614.336100.417903.116302.28560HepG2FUBP3
EFCAB14ENSG00000159658.61132.90550837.517800.435703.045402.34890HepG2G3BP1
EFCAB14ENSG00000159658.6853.662901217.45960-0.512101.988401.43970HepG2GPKOW
EFCAB14ENSG00000159658.61078.18490867.056500.314302.071801.50350HepG2HNRNPA1
EFCAB14ENSG00000159658.61224.40920911.419600.425805.210303.99560HepG2HNRNPA2B1
EFCAB14ENSG00000159658.6453.67620711.87410-0.650004.322402.42890HepG2HNRNPD
EFCAB14ENSG00000159658.61702.494001161.835900.551103.647102.93400HepG2HNRNPLL
EFCAB14ENSG00000159658.6426.99450958.07110-1.1659029.7817027.97250HepG2HNRNPU
EFCAB14ENSG00000159658.61160.74780851.343800.447103.418002.67510HepG2IGF2BP2
EFCAB14ENSG00000159658.61373.37840798.847800.781602.847201.85080HepG2IGF2BP3
EFCAB14ENSG00000159658.61276.40600903.079600.499104.075503.28160HepG2MAGOH
EFCAB14ENSG00000159658.61215.73860751.164800.694504.087102.99400HepG2PABPC1
EFCAB14ENSG00000159658.61473.75740827.921000.8318010.263808.89520HepG2PABPC4
EFCAB14ENSG00000159658.61226.41760880.958700.477207.200706.29630HepG2PCBP1
EFCAB14ENSG00000159658.6646.17050854.52150-0.403203.960403.09460HepG2PPIL4
EFCAB14ENSG00000159658.6928.50920561.717200.725006.740505.54070HepG2PRPF8
EFCAB14ENSG00000159658.61167.44350896.439800.381004.785004.10830HepG2PTBP1
EFCAB14ENSG00000159658.6577.59150938.75250-0.700708.546007.57420HepG2PUF60
EFCAB14ENSG00000159658.61283.19720996.483700.364705.211404.45020HepG2PUM1
EFCAB14ENSG00000159658.61286.66280847.195500.6028011.8390010.71720HepG2PUS1
EFCAB14ENSG00000159658.61315.97730863.441400.607903.219202.46190HepG2RAVER1
EFCAB14ENSG00000159658.61317.646701039.172900.342403.760403.18060HepG2RBM22
EFCAB14ENSG00000159658.6867.008001079.90890-0.316802.347001.70960HepG2RPLP0
EFCAB14ENSG00000159658.6757.71970601.737300.332402.210901.65480HepG2RPS19
EFCAB14ENSG00000159658.6473.73160841.95200-0.829703.734102.47500HepG2RPS5
EFCAB14ENSG00000159658.6786.30270555.649600.500803.094102.26930HepG2RRP9
EFCAB14ENSG00000159658.6655.06530853.20000-0.381204.175203.41200HepG2SAFB2
EFCAB14ENSG00000159658.6851.62300603.933900.495703.947002.82480HepG2SERBP1
EFCAB14ENSG00000159658.61668.508301186.329600.492003.159702.43870HepG2SF3A3
EFCAB14ENSG00000159658.6747.26160900.02790-0.268402.674201.98210HepG2SLBP
EFCAB14ENSG00000159658.61269.04640879.906900.528203.432302.35110HepG2SMNDC1
EFCAB14ENSG00000159658.62122.674701279.602900.730105.699704.56880HepG2SNRNP70
EFCAB14ENSG00000159658.61764.611201173.727500.5882013.4508012.56750HepG2SRFBP1
EFCAB14ENSG00000159658.61163.67510974.137400.256402.388301.94040HepG2SRSF1
EFCAB14ENSG00000159658.61126.99590926.829200.282002.518801.91730HepG2SRSF5
EFCAB14ENSG00000159658.61337.293101019.108200.391905.644504.96220HepG2SSB
EFCAB14ENSG00000159658.61216.60010843.559800.528205.941104.59020HepG2SUPT6H
EFCAB14ENSG00000159658.61119.81700875.656300.354703.599302.97520HepG2TAF15
EFCAB14ENSG00000159658.61227.63080930.915100.399104.259203.66670HepG2TIAL1
EFCAB14ENSG00000159658.61958.080301068.620500.8736013.6341012.20250HepG2U2AF1
EFCAB14ENSG00000159658.61909.436501053.000100.858502.499901.56760HepG2U2AF2
EFCAB14ENSG00000159658.6676.823301015.75480-0.585708.799407.82910HepG2UTP3
EFCAB14ENSG00000159658.61075.43900915.140700.232802.207001.59720HepG2ZC3H8
EFCAB14ENSG00000159658.61952.381601157.101100.7546025.7683024.52470HepG2ZNF622
EFCAB14ENSG00000159658.64202.620502595.065200.695408.066807.15230K562AQR
EFCAB14ENSG00000159658.63387.722402568.210300.399502.704801.30710K562BUD13
EFCAB14ENSG00000159658.65259.159402997.230100.811106.310804.64920K562CNOT7
EFCAB14ENSG00000159658.65465.583304427.859300.303704.263103.04370K562CELF1
EFCAB14ENSG00000159658.61237.926101541.77220-0.316702.810601.76020K562DDX3X
EFCAB14ENSG00000159658.61099.562601583.92220-0.526603.531302.06990K562EEF2
EFCAB14ENSG00000159658.61226.817601485.24020-0.275802.318701.58730K562EIF3G
EFCAB14ENSG00000159658.63030.559602456.722400.302702.096701.30730K562FTO
EFCAB14ENSG00000159658.62508.078001738.291600.528803.579202.75020K562G3BP2
EFCAB14ENSG00000159658.62673.210702228.676400.262302.898101.73110K562GLRX3
EFCAB14ENSG00000159658.62351.178101663.418400.499106.778205.88370K562HNRNPC
EFCAB14ENSG00000159658.61873.174801485.305800.334603.080701.86950K562HNRNPF
EFCAB14ENSG00000159658.61642.810002235.89190-0.444706.796005.39330K562HNRNPU
EFCAB14ENSG00000159658.62758.069903593.37790-0.381703.867302.92950K562HSPD1
EFCAB14ENSG00000159658.63969.328202322.276300.773303.062702.07510K562KRR1
EFCAB14ENSG00000159658.64625.771303839.022400.268902.532701.45490K562MSI2
EFCAB14ENSG00000159658.62881.382502343.156900.298204.814803.77090K562MTPAP
EFCAB14ENSG00000159658.62563.052401998.415000.358902.119001.36970K562NAA15
EFCAB14ENSG00000159658.63038.075302603.490000.222604.100803.21190K562NSUN2
EFCAB14ENSG00000159658.65046.152802879.476600.809306.916604.97850K562PABPC1
EFCAB14ENSG00000159658.62334.787003008.68230-0.365803.415302.48780K562PPIG
EFCAB14ENSG00000159658.65359.340004179.306100.358705.596104.03410K562PUM1
EFCAB14ENSG00000159658.63243.023502378.399300.447204.672403.99060K562PUS1
EFCAB14ENSG00000159658.62744.835302317.291900.244202.526001.95530K562RBM15
EFCAB14ENSG00000159658.61813.043401360.530000.414104.787503.48040K562RCC2
EFCAB14ENSG00000159658.62201.762701803.441100.287802.467101.44830K562SAFB
EFCAB14ENSG00000159658.63797.376602568.932200.5637013.5348011.83960K562SF3A3
EFCAB14ENSG00000159658.61697.401301289.764000.396103.666102.43830K562SRFBP1
EFCAB14ENSG00000159658.63183.426802631.922100.274403.918002.82390K562SRPK2
EFCAB14ENSG00000159658.64067.886903180.633200.354902.940701.64640K562STAU1
EFCAB14ENSG00000159658.61999.749401442.148600.471504.127202.86580K562SUPV3L1
EFCAB14ENSG00000159658.62509.638901706.338900.556502.767701.30610K562TAF15
EFCAB14ENSG00000159658.62368.633001935.358700.291402.175201.54270K562TARDBP
EFCAB14ENSG00000159658.61349.820301866.83970-0.467805.804204.55250K562TIA1
EFCAB14ENSG00000159658.62334.119601434.491600.702208.955507.20070K562TIAL1
EFCAB14ENSG00000159658.62222.958901523.768900.544706.959405.29970K562TRIM56
EFCAB14ENSG00000159658.62675.686601684.974700.667107.426705.47930K562U2AF1
EFCAB14ENSG00000159658.62970.280801740.210400.7712017.6942015.61240K562U2AF2
EFCAB14ENSG00000159658.63242.445902760.533100.232003.138802.37580K562UPF1
EFCAB14ENSG00000159658.63710.911003074.980300.271102.544301.31040K562WRN
EFCAB14ENSG00000159658.64017.865102923.276400.458705.804904.48100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EFCAB14 is not available on ENCORE database.





18 RBPs can affect the splicing of EFCAB14 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.523000.000000.00000includedK562SRSF1
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.234000.000210.01085includedK562PRPF8
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.257000.000010.00256includedK562MATR3
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.273000.000780.01667excludedHepG2U2AF1
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.219000.000140.09782excludedK562TROVE2
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.329000.000530.04786includedHepG2QKI
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.433000.000000.00000includedK562HNRNPA1
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.567000.000000.00000includedHepG2PTBP1
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.197000.001660.07425includedK562EFTUD2
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.487000.000000.00000includedHepG2MATR3
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.579000.000000.00000includedHepG2SRSF1
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.316000.000060.00501includedHepG2SF3B4
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.190000.000500.06458includedK562RBM22
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.238000.000000.00034excludedK562HNRNPU
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.431000.000000.00050includedHepG2DDX55
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.315000.000000.00000excludedK562ZC3H8
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.206000.000250.08916excludedK562NCBP2
SEEFCAB14ENSG00000159658.6chr1-471540244715421647152455471525424715525847155363-0.203000.000050.06282excludedK562PABPC4
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.406000.000000.00000includedK562PTBP1
SEEFCAB14ENSG00000159658.6chr1-4715402447154216471524554715254247155258471553630.176000.005450.07426includedK562HNRNPC
A3SSEFCAB14ENSG00000159658.6chr1-4715749847157642471574984715760947162222471623920.064000.000550.00407longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for EFCAB14 is not avaliable on ENCORE database.