SUGT1

General Information

Gene Name       : SUGT1
Gene ID             : ENSG00000165416.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SUGT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUGT1ENSG00000165416.1453.9552.3953.17ENCSR000AEF
HepG2SUGT1ENSG00000165416.1431.8553.3842.62ENCSR985KAT
K562SUGT1ENSG00000165416.1441.2339.7240.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUGT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SUGT1 RNA is bound by 10 proteins.  







eCLIP assay for SUGT1 is not avaliable on ENCORE database.





10 proteins are bound to SUGT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135326196453262055+3'-UTR,CDS4.545715.87902HepG2KHSRP
chr135326199553262035+3'-UTR4.851515.45041K562PUM2
chr135326197453262053+3'-UTR3.778787.12499K562KHSRP
chr135322697953227096+5'-UTR,CDS,intron-Proximal3.602918.88978K562DDX3X
chr135322718453227344+5'-UTR,CDS,intron-Distal,intron-Proximal3.059683.74472K562PRPF8
chr135322700453227075+5'-UTR,CDS3.089063.41227K562UCHL5
chr135322719453227239+5'-UTR,CDS,intron-Proximal3.438945.58370HepG2PPIG
chr135322719153227260+5'-UTR,CDS,intron-Proximal4.048067.26133HepG2PRPF8
chr135325424253254288+CDS4.238726.65960HepG2BCLAF1
chr135323811653238182+CDS,intron-Proximal4.895794.65563K562AQR
chr135323981753239858+CDS3.611844.46864HepG2BCLAF1
chr135326182253261888+CDS,intron-Proximal4.200714.69223K562SF3B4
chr135325413253254189+CDS3.135624.61143K562UCHL5
chr135326185453261907+CDS,intron-Proximal4.616374.64001HepG2U2AF2
chr135323618253236244+intron-Distal3.873563.47043HepG2KHSRP
chr135323609353236187+intron-Distal4.886406.94732K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUGT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUGT1 is not available on ENCORE database.

  • 65 RBPs can affect the levels of SUGT1.  








The Knockdown/knockout RNA-Seq assay for SUGT1 is not available on ENCORE database.





65 RBPs can affect the gene expression of SUGT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUGT1ENSG00000165416.10890.219701170.74280-0.395202.880102.18130HepG2CPSF6
SUGT1ENSG00000165416.101533.327801269.656300.272103.053102.38400HepG2CELF1
SUGT1ENSG00000165416.10934.641601365.04440-0.5465010.544709.24270HepG2DAZAP1
SUGT1ENSG00000165416.101625.890501291.309900.332302.178001.61580HepG2DDX3X
SUGT1ENSG00000165416.10780.821301109.15940-0.506403.582002.88690HepG2DDX6
SUGT1ENSG00000165416.10638.69490779.65360-0.287702.706302.06030HepG2DNAJC2
SUGT1ENSG00000165416.10839.21070636.085500.399702.760101.65290HepG2EFTUD2
SUGT1ENSG00000165416.101667.590301346.827500.308103.934402.96750HepG2EIF4G1
SUGT1ENSG00000165416.10900.443501327.21360-0.559703.142902.46550HepG2GPKOW
SUGT1ENSG00000165416.10700.42880902.22720-0.365303.903502.75710HepG2HDGF
SUGT1ENSG00000165416.10609.08140794.18410-0.382802.648002.01330HepG2HNRNPA1
SUGT1ENSG00000165416.10835.600301015.23050-0.280902.269401.61540HepG2HNRNPF
SUGT1ENSG00000165416.10902.954901116.67510-0.306501.932301.34320HepG2HNRNPK
SUGT1ENSG00000165416.10765.00270999.70490-0.386003.526902.71660HepG2IGF2BP1
SUGT1ENSG00000165416.10635.68070863.86760-0.442505.820504.36140HepG2KIF1C
SUGT1ENSG00000165416.10953.912501291.55700-0.437202.338301.45360HepG2MTPAP
SUGT1ENSG00000165416.10768.703201090.32240-0.504303.940303.08910HepG2PABPC4
SUGT1ENSG00000165416.10558.18590782.68750-0.487703.731302.88740HepG2PPIL4
SUGT1ENSG00000165416.101000.84980666.092000.587309.065107.78160HepG2PRPF4
SUGT1ENSG00000165416.10916.86870693.873900.401902.980102.14380HepG2PRPF8
SUGT1ENSG00000165416.101136.769201370.69530-0.270002.054301.47080HepG2PUM2
SUGT1ENSG00000165416.10875.593101177.44510-0.427303.842703.12290HepG2QKI
SUGT1ENSG00000165416.101533.94580927.767400.725304.435203.55390HepG2RAVER1
SUGT1ENSG00000165416.101922.782201263.870800.6052011.4687010.56680HepG2RBM22
SUGT1ENSG00000165416.10551.50700781.48680-0.502806.316705.40300HepG2SAFB2
SUGT1ENSG00000165416.10899.244501239.07320-0.462507.188706.14180HepG2SLBP
SUGT1ENSG00000165416.102102.653401427.496700.5586013.5213012.63630HepG2SRFBP1
SUGT1ENSG00000165416.101811.005801181.498200.616109.798009.03110HepG2SRSF1
SUGT1ENSG00000165416.10822.05660961.23870-0.225701.835101.36840HepG2SRSF9
SUGT1ENSG00000165416.101490.352201239.407100.265903.061802.52790HepG2SSB
SUGT1ENSG00000165416.101222.798101450.96860-0.246802.471201.87710HepG2SUCLG1
SUGT1ENSG00000165416.10904.727701234.29380-0.448103.801502.96700HepG2TARDBP
SUGT1ENSG00000165416.10604.64490860.30080-0.508806.706105.89560HepG2TRIM56
SUGT1ENSG00000165416.10896.039801262.45850-0.494605.157103.92390HepG2TUFM
SUGT1ENSG00000165416.101545.45770886.692900.8014011.099209.81920HepG2U2AF1
SUGT1ENSG00000165416.10663.17960528.854100.326402.014701.36670HepG2UCHL5
SUGT1ENSG00000165416.101032.26030657.332600.6510012.1860010.94300HepG2ZC3H8
SUGT1ENSG00000165416.101415.876301891.89150-0.418102.731501.51770K562ABCF1
SUGT1ENSG00000165416.101187.33090995.836800.253602.366201.83470K562AGGF1
SUGT1ENSG00000165416.101331.392701755.21390-0.398703.605502.95310K562AQR
SUGT1ENSG00000165416.101290.777101087.233100.247502.151901.35340K562ATP5C1
SUGT1ENSG00000165416.10922.158201157.37760-0.327802.162101.39750K562BOP1
SUGT1ENSG00000165416.101267.891301512.73970-0.254702.329901.32250K562CPEB4
SUGT1ENSG00000165416.10957.526501230.66440-0.362102.935902.12830K562CPSF6
SUGT1ENSG00000165416.102114.394601565.209500.433807.863906.84200K562DDX47
SUGT1ENSG00000165416.101384.583801115.047100.312203.345902.37160K562DKC1
SUGT1ENSG00000165416.10961.076101297.54900-0.433105.384204.42940K562EIF2S2
SUGT1ENSG00000165416.10647.42480424.784400.607902.847501.82690K562EIF3A
SUGT1ENSG00000165416.101007.17770745.193300.434504.356303.36740K562EIF3G
SUGT1ENSG00000165416.10950.982401252.09450-0.396903.157802.23840K562FMR1
SUGT1ENSG00000165416.101153.84350861.827500.420904.980204.20270K562FXR1
SUGT1ENSG00000165416.10860.006401175.01350-0.450304.147003.17920K562GPKOW
SUGT1ENSG00000165416.101375.551001729.23890-0.330102.840502.07580K562GRSF1
SUGT1ENSG00000165416.101416.597201099.684800.365202.932702.08070K562KIF1C
SUGT1ENSG00000165416.10579.08530754.43800-0.381602.903001.33510K562LSM11
SUGT1ENSG00000165416.10907.282401146.93080-0.338202.553601.71640K562METAP2
SUGT1ENSG00000165416.10833.737801079.87110-0.373204.409703.40890K562MTPAP
SUGT1ENSG00000165416.101019.276001199.83650-0.235302.558301.83680K562NSUN2
SUGT1ENSG00000165416.101148.67830902.229400.348302.606001.65720K562PCBP2
SUGT1ENSG00000165416.101204.50330789.492500.609306.482005.33220K562PRPF8
SUGT1ENSG00000165416.102819.878002178.521700.372203.925002.95740K562PUF60
SUGT1ENSG00000165416.101797.610202270.41020-0.336903.907702.76390K562PUM2
SUGT1ENSG00000165416.101410.179901027.648000.456403.949503.31720K562PUS1
SUGT1ENSG00000165416.10537.71340692.14870-0.364202.618701.65650K562RCC2
SUGT1ENSG00000165416.101085.34400804.341300.432203.116202.24660K562RPS19
SUGT1ENSG00000165416.10962.034801183.92830-0.299402.823002.00130K562SF3A3
SUGT1ENSG00000165416.10476.91770656.14480-0.460303.151202.03910K562SRFBP1
SUGT1ENSG00000165416.10993.19280797.933300.315702.172801.44460K562SYNCRIP
SUGT1ENSG00000165416.10755.05250942.82220-0.320402.445501.68100K562TIA1
SUGT1ENSG00000165416.10528.57220775.19050-0.552504.433403.17390K562TRIM56
SUGT1ENSG00000165416.101142.59730817.914100.482203.549102.27500K562U2AF1
SUGT1ENSG00000165416.101069.75660844.682100.340703.020202.18120K562U2AF2
SUGT1ENSG00000165416.10939.193801272.21180-0.437806.539605.48890K562UPF1
SUGT1ENSG00000165416.10851.446301088.59180-0.354502.943602.04130K562WDR3
SUGT1ENSG00000165416.101592.040101977.34500-0.312702.670701.82560K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUGT1 is not available on ENCORE database.





16 RBPs can affect the splicing of SUGT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESUGT1ENSG00000165416.10chr13+5322718053227238532269735322709353231666532317570.055000.001590.03035includedK562SRSF1
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.162000.000020.00068excludedK562SRSF1
SESUGT1ENSG00000165416.10chr13+532271805322723853226973532270935323166653231757-0.290000.000000.00000excludedK562SF3B4
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.132000.000020.05637excludedK562WRN
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.190000.001420.02754excludedHepG2U2AF1
SESUGT1ENSG00000165416.10chr13+5323223353232361532316665323175753232533532326030.075000.000030.04579includedHepG2TROVE2
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.105000.004910.09447excludedHepG2HNRNPK
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.173000.000040.00527includedHepG2AKAP1
SESUGT1ENSG00000165416.10chr13+532271805322723853226973532270935323166653231757-0.102000.000020.00034excludedK562AQR
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.152000.000010.00017excludedK562AQR
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.097000.002240.09126excludedK562EFTUD2
SESUGT1ENSG00000165416.10chr13+532356095323570553233313532333845323678353236837-0.150000.001160.02543excludedK562U2AF1
SESUGT1ENSG00000165416.10chr13+532271805322723853226973532270935323166653231757-0.130000.000000.00000excludedHepG2SF3A3
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.239000.000000.00013includedHepG2SUPV3L1
SESUGT1ENSG00000165416.10chr13+5323223353232361532316665323175753232533532326030.075000.000000.00037includedHepG2SF3B4
SESUGT1ENSG00000165416.10chr13+532271805322723853226978532270935323166653231757-0.200000.000000.00000excludedHepG2SF3B4
SESUGT1ENSG00000165416.10chr13+5322718053227238532269735322709353231666532317570.070000.000010.00106includedK562HNRNPU
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.232000.000050.01558includedHepG2DDX55
SESUGT1ENSG00000165416.10chr13+532271805322723853226973532270935323166653231757-0.128000.000010.00094excludedK562SF3B1
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.628000.000000.00000includedHepG2HNRNPC
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.245000.000030.01375includedHepG2FUS
SESUGT1ENSG00000165416.10chr13+5323560953235705532333135323338453236783532368370.589000.000000.00003includedK562HNRNPC
MXESUGT1ENSG00000165416.10chr13+5322718053227238532316665323175753226973532270935323253353232603-0.091000.005340.075902includedHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUGT1 is not avaliable on ENCORE database.