VPS13B

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	VPS13B	ENSG00000132549.18	11.72	10.60	11.16	ENCSR000AEF
HepG2	VPS13B	ENSG00000132549.18	5.70	8.55	7.12	ENCSR985KAT
K562	VPS13B	ENSG00000132549.18	8.63	10.26	9.45	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for VPS13B is not avaliable on ENCORE database.

Proteins bound to RNA

VPS13B RNA is bound by 39 proteins.

eCLIP assay for VPS13B is not avaliable on ENCORE database.

39 proteins are bound to VPS13B RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	100568860	100568882	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.68752	3.81516	HepG2	EIF3H
chr8	100523710	100523729	+	3'-UTR,CDS	3.90638	5.65086	HepG2	BCLAF1
chr8	100533164	100533239	+	3'-UTR,CDS,intron-Proximal	4.86455	13.26617	HepG2	EIF3H
chr8	100523353	100523390	+	3'-UTR,CDS	3.85348	8.08603	HepG2	BCLAF1
chr8	100568679	100568715	+	3'-UTR,CDS,intron-Distal	4.31130	4.42137	HepG2	HLTF
chr8	100589719	100589762	+	3'-UTR,CDS	3.29702	3.08145	HepG2	HLTF
chr8	100589985	100590121	+	3'-UTR,intron-Distal,polyA_site	4.12887	4.31512	K562	KHSRP
chr8	100654630	100654658	+	3'-UTR,CDS	4.06898	5.35703	HepG2	BCLAF1
chr8	100880622	100880695	+	3'-UTR,CDS,intron-Proximal	3.47470	3.59112	HepG2	PPIG
chr8	100883639	100883693	+	3'-UTR,CDS,intron-Proximal	4.76838	5.17615	K562	AQR
chr8	100711764	100711796	+	3'-UTR,CDS	3.69886	5.97823	HepG2	BCLAF1
chr8	100568677	100568726	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.88076	11.72666	HepG2	EIF3H
chr8	100588001	100588011	+	3'-UTR,CDS	4.95778	6.37937	HepG2	BCLAF1
chr8	100889505	100889570	+	3'-UTR	4.74031	5.09993	K562	PUM2
chr8	100533166	100533230	+	3'-UTR,CDS	4.51640	11.22295	HepG2	BCLAF1
chr8	100654626	100654664	+	3'-UTR,CDS	4.64379	3.81516	HepG2	EIF3H
chr8	100589719	100589746	+	3'-UTR,CDS	5.77281	11.17302	HepG2	BCLAF1
chr8	100568678	100568738	+	3'-UTR,CDS,intron-Distal	6.25344	14.88884	HepG2	BCLAF1
chr8	100587885	100587909	+	3'-UTR,CDS,intron-Proximal	4.71979	4.29511	HepG2	EIF3H
chr8	100654472	100654524	+	3'-UTR,CDS	4.61722	8.85766	HepG2	BCLAF1
chr8	100025544	100025575	+	5'-UTR	3.86249	5.02066	HepG2	EIF3H
chr8	100025537	100025580	+	5'-UTR,intron-Proximal	3.69223	3.52645	HepG2	NCBP2
chr8	100025987	100026030	+	5'-UTR,CDS,intron-Proximal	4.21215	3.72434	HepG2	NCBP2
chr8	100025519	100025565	+	5'-UTR	4.37771	3.62829	K562	NCBP2
chr8	100155284	100155346	+	CDS	4.68336	11.61341	K562	ZNF622
chr8	100147323	100147365	+	CDS	6.34408	18.15906	HepG2	BCLAF1
chr8	100147823	100147896	+	CDS,intron-Proximal	3.72101	4.16915	HepG2	HLTF
chr8	100148934	100148980	+	CDS	4.43627	6.42098	HepG2	EIF3H
chr8	100160203	100160236	+	CDS	3.80062	9.43524	HepG2	BCLAF1
chr8	100146893	100146955	+	CDS	6.54866	21.91088	HepG2	BCLAF1
chr8	100403827	100403872	+	CDS	3.58240	8.20757	HepG2	BCLAF1
chr8	100182362	100182391	+	CDS	3.23605	3.51824	HepG2	EIF3D
chr8	100182264	100182318	+	CDS,intron-Proximal	4.34759	4.87320	K562	U2AF1
chr8	100050764	100050794	+	CDS	4.13077	8.08603	HepG2	BCLAF1
chr8	100026092	100026164	+	CDS,intron-Proximal	3.45795	11.18549	K562	DDX24
chr8	100147242	100147259	+	CDS,intron-Proximal	5.13624	6.73606	HepG2	EIF3H
chr8	100155335	100155390	+	CDS	4.81130	4.71804	HepG2	HLTF
chr8	100168941	100168970	+	CDS	4.80358	10.80414	HepG2	BCLAF1
chr8	100108538	100108560	+	CDS,intron-Proximal	4.17807	13.80747	HepG2	BCLAF1
chr8	100155259	100155394	+	CDS,intron-Proximal	6.44677	11.35548	K562	DDX24
chr8	100115306	100115349	+	CDS,intron-Proximal	4.07169	5.80935	K562	ZNF622
chr8	100168858	100168957	+	CDS	3.42699	6.85070	HepG2	EIF3D
chr8	100050675	100050731	+	CDS	4.05940	5.47804	K562	ZNF622
chr8	100454858	100455003	+	CDS,intron-Distal,intron-Proximal	4.06438	3.49003	K562	PRPF8
chr8	100050757	100050795	+	CDS,intron-Proximal	3.91919	4.19763	K562	DDX24
chr8	100147281	100147366	+	CDS,intron-Proximal	4.20855	9.73538	K562	DDX24
chr8	100155201	100155246	+	CDS,intron-Proximal	6.35940	11.96394	K562	DDX24
chr8	100123329	100123395	+	CDS,intron-Distal	3.13083	3.79741	HepG2	GRWD1
chr8	100133453	100133548	+	CDS	3.70153	9.07311	HepG2	EIF3H
chr8	100115180	100115226	+	CDS,intron-Proximal	4.15975	4.20767	HepG2	EIF3D
chr8	100026135	100026165	+	CDS,intron-Proximal	3.84736	9.12722	K562	ZNF622
chr8	100148890	100148919	+	CDS,intron-Proximal	4.05336	9.36792	K562	ZNF622
chr8	100146907	100146957	+	CDS,intron-Proximal	4.42503	10.65187	K562	DDX24
chr8	100287317	100287395	+	CDS	4.69768	4.78571	K562	UCHL5
chr8	100454628	100454642	+	CDS,intron-Proximal	3.56880	5.15500	HepG2	BCLAF1
chr8	100205101	100205222	+	CDS,intron-Proximal	3.97351	3.25872	K562	IGF2BP1
chr8	100155346	100155394	+	CDS,intron-Proximal	3.59268	6.44455	K562	ZNF622
chr8	100123352	100123399	+	CDS,intron-Distal	5.39969	18.83305	HepG2	BCLAF1
chr8	100168774	100168843	+	CDS,intron-Proximal	4.21202	5.74136	K562	DDX24
chr8	100148892	100148982	+	CDS,intron-Proximal	3.88970	8.35963	HepG2	EIF3D
chr8	100443776	100443823	+	CDS	4.90535	10.80414	HepG2	BCLAF1
chr8	100443785	100443849	+	CDS	3.67956	4.49887	K562	ZNF622
chr8	100155201	100155217	+	CDS,intron-Proximal	4.37876	3.55983	HepG2	HLTF
chr8	100147260	100147320	+	CDS	3.01284	5.11643	K562	ZNF622
chr8	100133404	100133459	+	CDS,intron-Proximal	4.58658	9.08097	K562	DDX24
chr8	100403809	100403886	+	CDS	3.82421	6.82493	K562	DDX24
chr8	100147823	100147848	+	CDS,intron-Proximal	6.41756	19.56446	HepG2	BCLAF1
chr8	100123326	100123352	+	CDS,intron-Distal	4.52340	8.85766	HepG2	BCLAF1
chr8	100148892	100148982	+	CDS,intron-Proximal	5.63793	10.30586	HepG2	HLTF
chr8	100050670	100050748	+	CDS	4.57852	18.21824	HepG2	BCLAF1
chr8	100146885	100146956	+	CDS,intron-Proximal	5.69805	10.72142	HepG2	EIF3H
chr8	100205103	100205126	+	CDS,intron-Proximal	4.80475	4.56577	HepG2	EIF3H
chr8	100287314	100287393	+	CDS	3.77405	8.30210	HepG2	EIF3H
chr8	100148896	100148982	+	CDS,intron-Proximal	7.47223	30.44519	K562	DDX24
chr8	100443779	100443822	+	CDS	3.22058	3.17151	K562	UCHL5
chr8	100108571	100108660	+	CDS	3.56711	15.02459	K562	ZNF622
chr8	100050747	100050795	+	CDS,intron-Proximal	3.28379	4.25541	HepG2	GRWD1
chr8	100454673	100454746	+	CDS	4.57278	7.36864	HepG2	EIF3H
chr8	100155201	100155216	+	CDS,intron-Proximal	3.18658	3.00074	HepG2	EIF3D
chr8	100133442	100133510	+	CDS	3.90204	15.27481	HepG2	BCLAF1
chr8	100286503	100286532	+	CDS	3.47102	7.01246	HepG2	BCLAF1
chr8	100396479	100396539	+	CDS	4.24130	14.68146	HepG2	BCLAF1
chr8	100147848	100147882	+	CDS	4.85982	11.80957	HepG2	BCLAF1
chr8	100454642	100454724	+	CDS	4.76475	19.99415	HepG2	BCLAF1
chr8	100050650	100050675	+	CDS,intron-Proximal	3.70210	3.07653	K562	ZNF622
chr8	100147242	100147281	+	CDS,intron-Proximal	3.55452	8.56897	K562	DDX24
chr8	100108560	100108611	+	CDS	5.12502	27.60183	HepG2	BCLAF1
chr8	100160204	100160239	+	CDS,intron-Proximal	4.10048	4.12139	K562	DDX24
chr8	100168887	100168908	+	CDS	3.29239	3.02345	K562	ZNF622
chr8	100133532	100133674	+	CDS,intron-Proximal	3.87460	9.86138	K562	ZNF622
chr8	100108562	100108660	+	CDS	3.80574	15.05797	HepG2	EIF3H
chr8	100108551	100108617	+	CDS	3.36125	5.96568	HepG2	GRWD1
chr8	100147823	100147893	+	CDS,intron-Proximal	3.90430	3.79347	HepG2	GRWD1
chr8	100146916	100146956	+	CDS,intron-Proximal	3.63398	4.25142	K562	BUD13
chr8	100168775	100168847	+	CDS,intron-Proximal	3.74607	5.03105	K562	BUD13
chr8	100493942	100494017	+	CDS	4.69689	8.32506	HepG2	EIF3H
chr8	100182336	100182391	+	CDS	3.78854	5.66290	HepG2	EIF3H
chr8	100133530	100133605	+	CDS	4.85763	21.78560	HepG2	BCLAF1
chr8	100168776	100168873	+	CDS,intron-Proximal	4.58188	22.74466	HepG2	BCLAF1
chr8	100443849	100443890	+	CDS	4.73465	5.24929	K562	ZNF622
chr8	100133459	100133591	+	CDS	5.43718	14.86352	K562	DDX24
chr8	100147268	100147323	+	CDS	5.66530	22.72631	HepG2	BCLAF1
chr8	100146916	100146955	+	CDS	3.26001	3.07152	HepG2	HLTF
chr8	100133641	100133673	+	CDS	5.55744	9.78571	HepG2	BCLAF1
chr8	100146913	100146955	+	CDS	3.39718	5.65306	K562	ZNF622
chr8	100182345	100182392	+	CDS,intron-Proximal	3.17027	3.63043	HepG2	GRWD1
chr8	100205103	100205121	+	CDS,intron-Proximal	3.88378	3.19863	HepG2	EIF3D
chr8	100148918	100148981	+	CDS,intron-Proximal	4.64049	42.57902	HepG2	BCLAF1
chr8	100205163	100205182	+	CDS	3.98033	5.36555	HepG2	BCLAF1
chr8	100155272	100155352	+	CDS	3.79904	4.12907	HepG2	FASTKD2
chr8	100115179	100115246	+	CDS,intron-Proximal	5.30800	11.60475	K562	DDX24
chr8	100513914	100513977	+	CDS,intron-Proximal	3.05007	3.00074	HepG2	EIF3D
chr8	100443843	100443892	+	CDS	5.31327	16.89254	HepG2	BCLAF1
chr8	100443857	100443892	+	CDS	4.71979	3.33922	HepG2	EIF3H
chr8	100168923	100168970	+	CDS	3.00752	3.17744	HepG2	GRWD1
chr8	100403827	100403929	+	CDS	3.73760	12.89019	HepG2	EIF3H
chr8	100115180	100115232	+	CDS,intron-Proximal	4.93650	7.44453	HepG2	HLTF
chr8	100155273	100155392	+	CDS	4.03593	10.23178	HepG2	EIF3H
chr8	100108598	100108659	+	CDS	4.63110	5.23563	HepG2	FXR2
chr8	100050663	100050726	+	CDS	4.63602	6.36164	K562	DDX24
chr8	100168873	100168941	+	CDS	4.61530	18.54943	HepG2	BCLAF1
chr8	100479711	100479769	+	CDS	5.28854	7.23011	HepG2	EIF3H
chr8	100147242	100147268	+	CDS,intron-Proximal	6.33903	18.79946	HepG2	BCLAF1
chr8	100050650	100050737	+	CDS,intron-Proximal	4.51285	5.42152	HepG2	GRWD1
chr8	100168859	100168951	+	CDS	5.59724	8.22235	HepG2	EIF3H
chr8	100514046	100514082	+	CDS	4.61875	7.97334	HepG2	BCLAF1
chr8	100403872	100403931	+	CDS	4.44478	16.88216	HepG2	BCLAF1
chr8	100123480	100123504	+	CDS,intron-Distal	4.06241	5.94293	HepG2	BCLAF1
chr8	100050653	100050670	+	CDS	3.73440	5.15500	HepG2	BCLAF1
chr8	100286539	100286560	+	CDS	3.12140	5.29017	HepG2	BCLAF1
chr8	100108614	100108661	+	CDS,intron-Proximal	4.74285	5.80740	HepG2	EIF3D
chr8	100148931	100148982	+	CDS,intron-Proximal	4.43842	4.91614	HepG2	GRWD1
chr8	100148919	100148985	+	CDS,intron-Proximal	4.44266	19.02394	K562	ZNF622
chr8	100147823	100147873	+	CDS,intron-Proximal	4.10452	6.81381	K562	DDX24
chr8	100155200	100155224	+	CDS,intron-Proximal	4.48340	4.77252	K562	ZNF622
chr8	100148882	100148985	+	CDS,intron-Proximal	4.11132	11.52999	K562	BUD13
chr8	100147320	100147366	+	CDS,intron-Proximal	4.37553	9.19326	K562	ZNF622
chr8	100182365	100182389	+	CDS	3.09462	6.09950	HepG2	BCLAF1
chr8	100147268	100147329	+	CDS	3.05111	5.41277	K562	UCHL5
chr8	100108595	100108661	+	CDS,intron-Proximal	3.75635	6.52093	HepG2	HLTF
chr8	100115179	100115234	+	CDS,intron-Proximal	4.89032	23.55573	HepG2	BCLAF1
chr8	100155306	100155392	+	CDS	5.89969	25.76762	HepG2	BCLAF1
chr8	100108538	100108664	+	CDS,intron-Proximal	4.38546	25.73051	K562	DDX24
chr8	100168927	100168975	+	CDS,intron-Proximal	4.73321	6.93329	K562	DDX24
chr8	100128074	100128102	+	CDS,intron-Distal	4.63086	8.80935	HepG2	BCLAF1
chr8	100287308	100287412	+	CDS,intron-Proximal	4.57620	21.85248	HepG2	BCLAF1
chr8	100155201	100155216	+	CDS,intron-Proximal	4.71707	21.87973	HepG2	BCLAF1
chr8	100026047	100026155	+	CDS	3.99195	16.47978	HepG2	EIF3H
chr8	100147823	100147869	+	CDS,intron-Proximal	3.56737	6.55026	K562	ZNF622
chr8	100155287	100155379	+	CDS	3.79953	5.55508	K562	BUD13
chr8	100115180	100115241	+	CDS,intron-Proximal	4.97837	6.81136	K562	ZNF622
chr8	100026060	100026164	+	CDS,intron-Proximal	4.25670	22.63391	HepG2	BCLAF1
chr8	100115335	100115347	+	CDS	4.38136	7.53358	HepG2	BCLAF1
chr8	100182270	100182305	+	CDS	3.36743	6.47196	HepG2	BCLAF1
chr8	100287428	100287475	+	CDS	4.70395	5.24929	K562	ZNF622
chr8	100454652	100454707	+	CDS	3.38707	3.31745	K562	ZNF622
chr8	100147242	100147364	+	CDS,intron-Proximal	4.40640	8.97451	HepG2	FASTKD2
chr8	100147924	100147961	+	CDS	3.84111	7.13692	K562	ZNF622
chr8	100147241	100147270	+	CDS,intron-Proximal	3.53612	3.80065	HepG2	PPIG
chr8	100108611	100108661	+	CDS,intron-Proximal	4.26895	23.45695	HepG2	BCLAF1
chr8	100133407	100133442	+	CDS	4.42791	12.88094	HepG2	BCLAF1
chr8	100286427	100286465	+	CDS	4.00656	9.09836	HepG2	BCLAF1
chr8	100148894	100148983	+	CDS,intron-Proximal	4.46077	6.39364	HepG2	PPIG
chr8	100155311	100155380	+	CDS	3.71741	3.34848	HepG2	PPIG
chr8	100127931	100127981	+	CDS,intron-Distal	4.88347	12.44336	HepG2	BCLAF1
chr8	100443837	100443892	+	CDS	4.68401	5.01506	HepG2	HLTF
chr8	100155199	100155216	+	CDS,intron-Proximal	4.20368	4.39669	K562	BUD13
chr8	100060740	100060793	+	intron-Distal	3.79625	3.04224	HepG2	SUGP2
chr8	100036472	100036583	+	intron-Distal	4.44893	5.18738	K562	TARDBP
chr8	100464349	100464417	+	intron-Distal	3.84602	3.54208	HepG2	SUGP2
chr8	100061283	100061333	+	intron-Distal	3.95725	3.01456	K562	EXOSC5
chr8	100038024	100038076	+	intron-Distal	5.42599	10.01162	K562	EXOSC5
chr8	100426782	100426872	+	intron-Distal	4.39449	3.59909	K562	EXOSC5
chr8	100091175	100091217	+	intron-Distal	4.84370	7.38107	K562	HNRNPM
chr8	100086887	100086929	+	intron-Distal	3.06845	3.14999	K562	EXOSC5
chr8	100549950	100550055	+	intron-Distal	3.88126	3.26999	K562	KHSRP
chr8	100090705	100090787	+	intron-Distal	4.04339	3.89786	K562	RBFOX2
chr8	100067024	100067126	+	intron-Distal	3.91590	3.29197	K562	HNRNPM
chr8	100067444	100067492	+	intron-Distal	4.95725	7.06230	K562	EXOSC5
chr8	100025625	100025713	+	intron-Distal,intron-Proximal	4.38424	5.20041	HepG2	PRPF4
chr8	100207917	100208000	+	intron-Distal	3.91957	3.23532	K562	MATR3
chr8	100087977	100088025	+	intron-Distal	5.11563	8.03988	K562	EXOSC5
chr8	100540120	100540157	+	intron-Distal	4.96525	4.49449	K562	TROVE2
chr8	100090832	100090877	+	intron-Distal	4.34855	9.10500	K562	EXOSC5
chr8	100058999	100059043	+	intron-Distal	4.78329	4.48560	K562	EXOSC5
chr8	100472989	100473135	+	intron-Distal	4.91795	7.34531	HepG2	SUGP2
chr8	100038298	100038327	+	intron-Distal	4.72350	5.12432	K562	EXOSC5
chr8	100595667	100595747	+	intron-Distal	4.19406	4.96658	K562	KHSRP
chr8	100474334	100474447	+	intron-Distal	3.91098	5.36899	HepG2	PTBP1
chr8	100034754	100034877	+	intron-Distal	4.64005	5.19823	K562	KHSRP
chr8	100049443	100049534	+	intron-Distal	4.16136	5.93583	K562	QKI
chr8	100059927	100059980	+	intron-Distal	3.64445	6.40711	K562	EXOSC5
chr8	100182098	100182214	+	intron-Distal,intron-Proximal	4.12029	4.14103	K562	KHSRP
chr8	100471866	100471943	+	intron-Distal	4.16127	4.86344	K562	AATF
chr8	100086526	100086643	+	intron-Distal	3.33882	4.08064	K562	KHSRP
chr8	100328377	100328444	+	intron-Distal	3.33263	3.11000	HepG2	HNRNPM
chr8	100292861	100292909	+	intron-Distal	4.83878	5.75114	HepG2	PTBP1
chr8	100091303	100091349	+	intron-Distal	5.23528	7.71312	K562	EXOSC5
chr8	100328254	100328327	+	intron-Distal	4.27228	3.30696	K562	EXOSC5
chr8	100116772	100116880	+	intron-Distal	5.11863	7.79030	HepG2	PCBP2
chr8	100031201	100031248	+	intron-Distal	4.91482	6.27552	K562	KHSRP
chr8	100091660	100091701	+	intron-Distal	3.60500	5.29169	K562	HNRNPM
chr8	100083473	100083567	+	intron-Distal	4.81407	6.61547	K562	HNRNPM
chr8	100087721	100087751	+	intron-Distal	3.84605	3.01445	K562	EXOSC5
chr8	100036287	100036458	+	intron-Distal	4.53532	4.31512	K562	KHSRP
chr8	100090610	100090667	+	intron-Distal	5.49081	9.68086	K562	EXOSC5
chr8	100152827	100152976	+	intron-Distal	4.37591	8.29206	HepG2	PCBP2
chr8	100426768	100426870	+	intron-Distal	3.82928	3.23532	K562	MATR3
chr8	100060738	100060789	+	intron-Distal	3.86093	5.20902	K562	EXOSC5
chr8	100091084	100091164	+	intron-Distal	4.32311	3.89786	K562	RBFOX2
chr8	100318174	100318299	+	intron-Distal	4.00124	4.31512	K562	KHSRP
chr8	100091104	100091178	+	intron-Distal	3.87837	3.45219	HepG2	RBFOX2
chr8	100305226	100305265	+	intron-Distal	6.68780	11.39978	HepG2	LARP7
chr8	100091333	100091384	+	intron-Distal	4.96209	6.19745	HepG2	HNRNPM
chr8	100508098	100508156	+	intron-Distal	7.19306	85.25574	HepG2	SUPV3L1
chr8	100305255	100305275	+	intron-Distal	3.94017	4.84244	K562	XRCC6
chr8	100091652	100091708	+	intron-Distal	4.80383	11.57958	K562	EXOSC5
chr8	100292722	100292833	+	intron-Distal	3.99043	3.22972	K562	TARDBP
chr8	100058295	100058342	+	intron-Distal	4.61131	4.48560	K562	EXOSC5
chr8	100039106	100039145	+	intron-Distal	4.27918	7.91454	K562	EXOSC5
chr8	100043935	100044012	+	intron-Distal	4.63854	5.12361	K562	EXOSC5
chr8	100084754	100084821	+	intron-Distal	4.22239	4.28571	K562	HNRNPM
chr8	100037500	100037551	+	intron-Distal	5.08302	7.38693	K562	EXOSC5
chr8	100061925	100061985	+	intron-Distal	4.13395	4.27460	K562	HNRNPM
chr8	100211944	100212004	+	intron-Distal	4.40600	3.50357	HepG2	QKI
chr8	100250474	100250534	+	intron-Distal	3.36870	3.07368	K562	TARDBP
chr8	100345897	100346032	+	intron-Distal	3.92632	6.06017	HepG2	QKI
chr8	100474341	100474448	+	intron-Distal	5.18556	5.39854	K562	PTBP1
chr8	100153698	100153800	+	intron-Distal	3.22511	3.68839	K562	KHSRP
chr8	100733742	100733859	+	intron-Distal	4.08474	7.26586	K562	KHSRP
chr8	100214181	100214268	+	intron-Distal	3.44758	6.59733	K562	KHSRP
chr8	100283374	100283509	+	intron-Distal	4.86888	8.50955	K562	QKI
chr8	100124288	100124453	+	intron-Distal	4.32688	5.44709	K562	KHSRP
chr8	100088635	100088680	+	intron-Distal	5.04221	8.03988	K562	EXOSC5
chr8	100176934	100177150	+	intron-Distal	4.02380	12.47653	K562	PTBP1
chr8	100123106	100123202	+	intron-Distal	4.23095	4.07352	K562	KHSRP
chr8	100087205	100087253	+	intron-Distal	3.50098	4.02190	K562	EXOSC5
chr8	100060745	100060795	+	intron-Distal	3.53055	4.80898	K562	HNRNPM
chr8	100090820	100090876	+	intron-Distal	5.33415	11.30381	K562	HNRNPM
chr8	100328276	100328377	+	intron-Distal	4.50217	9.98098	HepG2	HNRNPM
chr8	100305231	100305255	+	intron-Distal	3.94017	4.84244	K562	XRCC6
chr8	100253067	100253147	+	intron-Distal,intron-Proximal	4.58728	5.54528	HepG2	QKI
chr8	100508098	100508153	+	intron-Distal	7.03531	400.00000	HepG2	DHX30
chr8	100425254	100425305	+	intron-Distal	5.21903	6.73640	K562	EXOSC5
chr8	100084992	100085047	+	intron-Distal	4.67754	5.44508	K562	EXOSC5
chr8	100287787	100287850	+	intron-Distal	3.02343	3.51696	K562	KHSRP
chr8	100426776	100426866	+	intron-Distal	4.27076	3.62238	HepG2	MATR3
chr8	100129729	100129888	+	intron-Distal	4.05879	4.07991	K562	ILF3
chr8	100454889	100454972	+	intron-Distal,intron-Proximal	4.79372	6.93191	K562	KHSRP
chr8	100298217	100298322	+	intron-Distal	4.54746	11.95660	HepG2	PCBP2
chr8	100213919	100213987	+	intron-Distal	5.02923	8.57760	K562	KHSRP
chr8	100205305	100205407	+	intron-Distal,intron-Proximal	3.62887	9.10611	K562	KHSRP
chr8	100068147	100068189	+	intron-Distal	3.19422	4.46810	K562	EXOSC5
chr8	100084562	100084599	+	intron-Distal	4.44425	3.89080	K562	EXOSC5
chr8	100068914	100068994	+	intron-Distal	4.28317	4.53244	K562	HNRNPM
chr8	100294967	100295058	+	intron-Distal	3.77007	10.34114	K562	KHSRP
chr8	100091230	100091281	+	intron-Distal	5.19820	9.74359	K562	HNRNPM
chr8	100051842	100052007	+	intron-Distal	3.69406	3.02234	K562	KHSRP
chr8	100238503	100238593	+	intron-Distal	3.90600	6.74598	HepG2	QKI
chr8	100091070	100091172	+	intron-Distal	6.56914	23.36166	K562	EXOSC5
chr8	100091430	100091549	+	intron-Distal	4.67687	4.79321	K562	RBFOX2
chr8	100328270	100328338	+	intron-Distal	3.88502	3.39864	HepG2	SUGP2
chr8	100063526	100063571	+	intron-Distal	4.30747	3.30687	K562	EXOSC5
chr8	100091412	100091524	+	intron-Distal	5.53390	34.36378	K562	EXOSC5
chr8	100213990	100214061	+	intron-Distal	4.73780	7.66316	K562	KHSRP
chr8	100883277	100883337	+	intron-Distal	4.70431	4.22343	HepG2	XPO5
chr8	100074189	100074246	+	intron-Distal	3.66799	3.24603	K562	KHSRP
chr8	100229489	100229537	+	intron-Distal	4.39562	4.80665	HepG2	QKI
chr8	100517697	100517771	+	intron-Distal	3.99404	3.29248	HepG2	SUGP2
chr8	100091233	100091279	+	intron-Distal	5.56198	11.33292	K562	EXOSC5
chr8	100038732	100038753	+	intron-Distal	3.16477	3.14999	K562	EXOSC5
chr8	100229420	100229489	+	intron-Distal	4.65725	5.20135	HepG2	QKI
chr8	100091115	100091171	+	intron-Distal	4.26593	3.07980	HepG2	HNRNPM
chr8	100090723	100090787	+	intron-Distal	6.20356	19.33500	K562	EXOSC5
chr8	100073949	100074106	+	intron-Distal	3.78199	5.95946	K562	KHSRP
chr8	100090964	100091005	+	intron-Distal	3.35289	3.18845	HepG2	HNRNPM
chr8	100067281	100067325	+	intron-Distal	3.07577	4.60533	K562	EXOSC5
chr8	100058797	100058864	+	intron-Distal	4.84103	6.41304	K562	EXOSC5
chr8	100472073	100472117	+	intron-Distal	4.08036	3.42844	K562	KHSRP
chr8	100025608	100025757	+	intron-Distal,intron-Proximal	4.43066	4.14518	HepG2	GTF2F1
chr8	100328590	100328678	+	intron-Distal	4.35399	5.31529	HepG2	SUGP2
chr8	100292859	100292920	+	intron-Distal	6.59834	21.86420	K562	PTBP1
chr8	100508098	100508156	+	intron-Distal	7.90500	160.37898	HepG2	GRSF1
chr8	100036496	100036550	+	intron-Distal	3.54221	4.31658	K562	EXOSC5
chr8	100430790	100430853	+	intron-Distal	5.33359	7.91717	K562	PTBP1
chr8	100059805	100059844	+	intron-Distal	4.47002	5.12361	K562	EXOSC5
chr8	100293760	100293816	+	intron-Distal	4.02284	4.03915	HepG2	SUGP2
chr8	100058665	100058721	+	intron-Distal	3.55357	6.13018	K562	EXOSC5
chr8	100305226	100305275	+	intron-Distal	4.95556	3.85055	HepG2	XPO5
chr8	100090963	100091053	+	intron-Distal	5.65037	13.43450	K562	HNRNPM
chr8	100346171	100346274	+	intron-Distal	3.83057	3.42844	K562	KHSRP
chr8	100091005	100091058	+	intron-Distal	3.63261	3.18845	HepG2	HNRNPM
chr8	100146675	100146803	+	intron-Distal,intron-Proximal	3.42135	4.30679	K562	KHSRP
chr8	100058779	100058859	+	intron-Distal	3.46849	4.08043	K562	HNRNPM
chr8	100038127	100038152	+	intron-Distal	4.42206	4.48560	K562	EXOSC5
chr8	100088332	100088369	+	intron-Distal	4.61821	5.76606	K562	EXOSC5
chr8	100037300	100037352	+	intron-Distal	3.69008	3.72952	K562	EXOSC5
chr8	100059423	100059464	+	intron-Distal	4.98876	7.71312	K562	EXOSC5
chr8	100318126	100318234	+	intron-Distal	4.42632	5.05488	HepG2	QKI
chr8	100038624	100038697	+	intron-Distal	4.08542	10.92788	K562	EXOSC5
chr8	100031097	100031168	+	intron-Distal	3.98877	3.24603	K562	KHSRP
chr8	100328174	100328234	+	intron-Distal	4.13261	3.86368	HepG2	HNRNPM
chr8	100306956	100307113	+	intron-Distal	3.47909	4.56724	K562	KHSRP
chr8	100424358	100424396	+	intron-Distal	3.96153	3.30687	K562	EXOSC5
chr8	100231283	100231367	+	intron-Distal	4.57790	4.79321	K562	RBFOX2
chr8	100091221	100091285	+	intron-Distal	4.79466	5.72853	HepG2	HNRNPM
chr8	100090911	100090999	+	intron-Distal	5.67008	25.36223	K562	EXOSC5
chr8	100326616	100326692	+	intron-Distal	4.18960	3.92684	K562	KHSRP
chr8	100031248	100031318	+	intron-Distal	3.82502	7.64049	K562	KHSRP
chr8	100293087	100293143	+	intron-Distal	5.29332	7.72823	K562	PTBP1
chr8	100205420	100205613	+	intron-Distal	3.73068	3.78824	HepG2	KHSRP
chr8	100177372	100177460	+	intron-Distal	3.84607	3.24603	K562	KHSRP
chr8	100091528	100091568	+	intron-Distal	4.50852	10.29675	K562	EXOSC5
chr8	100091326	100091395	+	intron-Distal	4.77492	12.14324	K562	HNRNPM
chr8	100080305	100080435	+	intron-Distal	3.92828	5.39628	K562	PTBP1
chr8	100091104	100091175	+	intron-Distal	5.45354	11.55909	K562	HNRNPM
chr8	100090728	100090814	+	intron-Distal	6.01189	17.38717	K562	HNRNPM
chr8	100090700	100090775	+	intron-Distal	4.60214	3.34098	HepG2	HNRNPM
chr8	100060103	100060167	+	intron-Distal	4.11563	7.01277	K562	EXOSC5
chr8	100328269	100328439	+	intron-Distal	5.45066	8.13679	K562	HNRNPM
chr8	100455240	100455304	+	intron-Distal	4.16684	4.31512	K562	KHSRP
chr8	100518507	100518650	+	intron-Distal	3.09007	3.68839	K562	KHSRP
chr8	100508098	100508152	+	intron-Distal	7.82170	74.36877	HepG2	FASTKD2
chr8	100289366	100289503	+	intron-Distal	4.29951	10.83474	K562	KHSRP
chr8	100038473	100038510	+	intron-Distal	4.88506	5.44433	K562	EXOSC5
chr8	100090876	100090953	+	intron-Distal	5.84579	16.58451	K562	HNRNPM
chr8	100091410	100091453	+	intron-Distal	3.81813	5.30350	K562	HNRNPM
chr8	100471997	100472064	+	intron-Distal	3.42782	5.36888	K562	KHSRP
chr8	100213409	100213520	+	intron-Distal	3.56919	9.48651	K562	KHSRP
chr8	100085273	100085310	+	intron-Distal	4.61131	4.48560	K562	EXOSC5
chr8	100036860	100036907	+	intron-Distal	5.04221	8.04096	K562	EXOSC5
chr8	100091463	100091524	+	intron-Distal	4.60188	11.62920	K562	HNRNPM
chr8	100366121	100366255	+	intron-Distal	3.86035	3.26999	K562	KHSRP
chr8	100092629	100092675	+	intron-Distal	4.01499	3.30687	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for VPS13B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for VPS13B is not available on ENCORE database.
73 RBPs can affect the levels of VPS13B.

The Knockdown/knockout RNA-Seq assay for VPS13B is not available on ENCORE database.

73 RBPs can affect the gene expression of VPS13B :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
VPS13B	ENSG00000132549.14	1864.53910	1472.87220	0.34010	4.72340	3.86750	HepG2	AUH
VPS13B	ENSG00000132549.14	584.81530	970.83100	-0.73120	5.94850	4.54710	HepG2	BCCIP
VPS13B	ENSG00000132549.14	1217.14650	972.04470	0.32430	2.48710	1.32140	HepG2	BUD13
VPS13B	ENSG00000132549.14	1379.66100	1140.95570	0.27400	2.17710	1.48770	HepG2	CALR
VPS13B	ENSG00000132549.14	994.22380	1203.31140	-0.27540	3.18690	2.48280	HepG2	CKAP4
VPS13B	ENSG00000132549.14	1351.22750	961.49160	0.49080	4.58020	3.71500	HepG2	CPSF6
VPS13B	ENSG00000132549.14	1312.45780	1040.58200	0.33480	2.90710	1.96750	HepG2	DDX24
VPS13B	ENSG00000132549.14	1597.00390	1091.84240	0.54850	2.72390	1.75400	HepG2	DDX59
VPS13B	ENSG00000132549.14	723.78750	982.61780	-0.44110	2.69600	2.08650	HepG2	DDX6
VPS13B	ENSG00000132549.14	1366.67890	1151.52270	0.24700	2.38060	1.74510	HepG2	DKC1
VPS13B	ENSG00000132549.14	775.77440	979.59500	-0.33650	3.16690	2.41890	HepG2	DNAJC21
VPS13B	ENSG00000132549.14	1671.22010	1310.18450	0.35100	2.02020	1.35660	HepG2	FIP1L1
VPS13B	ENSG00000132549.14	905.68070	663.16220	0.44950	3.75130	2.84450	HepG2	FUBP3
VPS13B	ENSG00000132549.14	1315.94500	1037.26210	0.34320	2.33120	1.51750	HepG2	G3BP2
VPS13B	ENSG00000132549.14	792.94150	1089.94190	-0.45900	3.16010	2.48100	HepG2	GPKOW
VPS13B	ENSG00000132549.14	860.02090	1100.04300	-0.35510	2.62390	1.94730	HepG2	HNRNPC
VPS13B	ENSG00000132549.14	933.24970	1139.27320	-0.28780	3.52830	2.77430	HepG2	HNRNPL
VPS13B	ENSG00000132549.14	916.38450	1092.77120	-0.25400	2.41910	1.84910	HepG2	HNRNPU
VPS13B	ENSG00000132549.14	1512.48870	932.03390	0.69840	2.21820	1.34680	HepG2	IGF2BP3
VPS13B	ENSG00000132549.14	640.97240	926.79780	-0.53200	3.00800	1.62100	HepG2	ILF3
VPS13B	ENSG00000132549.14	663.05220	905.47700	-0.44960	2.68970	1.51920	HepG2	KHDRBS1
VPS13B	ENSG00000132549.14	1409.61400	1084.55350	0.37810	2.55500	1.94460	HepG2	NCBP2
VPS13B	ENSG00000132549.14	1196.89000	974.45130	0.29650	3.10230	2.46510	HepG2	PCBP1
VPS13B	ENSG00000132549.14	774.15960	974.66700	-0.33230	3.08460	2.30960	HepG2	PPIL4
VPS13B	ENSG00000132549.14	1272.89100	994.77030	0.35560	3.67850	2.79870	HepG2	PRPF4
VPS13B	ENSG00000132549.14	1530.22780	1073.84860	0.51090	7.05950	6.12830	HepG2	QKI
VPS13B	ENSG00000132549.14	1292.68270	974.59770	0.40740	3.91560	3.12410	HepG2	RBM25
VPS13B	ENSG00000132549.14	890.55600	1201.94960	-0.43260	3.10240	1.95960	HepG2	RPS5
VPS13B	ENSG00000132549.14	763.09990	973.16910	-0.35080	3.98150	3.23280	HepG2	SAFB2
VPS13B	ENSG00000132549.14	1442.18810	1134.95640	0.34550	4.84000	3.95280	HepG2	SLBP
VPS13B	ENSG00000132549.14	934.12940	1134.89310	-0.28090	3.25950	2.57060	HepG2	SMN1
VPS13B	ENSG00000132549.14	1912.19360	1596.38120	0.26030	3.46060	2.91950	HepG2	SRFBP1
VPS13B	ENSG00000132549.14	1479.78140	1077.51970	0.45760	7.21900	6.53870	HepG2	SRSF1
VPS13B	ENSG00000132549.14	694.29300	876.62830	-0.33640	3.32020	2.72680	HepG2	SRSF9
VPS13B	ENSG00000132549.14	538.11470	829.95270	-0.62510	4.43860	3.01100	HepG2	STIP1
VPS13B	ENSG00000132549.14	1609.05400	1329.22790	0.27550	3.36720	2.69400	HepG2	SUCLG1
VPS13B	ENSG00000132549.14	827.56880	1071.32010	-0.37240	4.43830	3.75830	HepG2	TRIM56
VPS13B	ENSG00000132549.14	1462.53940	1120.70570	0.38400	2.82550	2.19090	HepG2	U2AF1
VPS13B	ENSG00000132549.14	399.48990	561.34570	-0.49070	2.99180	2.20540	HepG2	UCHL5
VPS13B	ENSG00000132549.14	567.81890	870.18290	-0.61590	3.29090	2.19170	HepG2	UPF2
VPS13B	ENSG00000132549.14	1412.79750	1680.71610	-0.25050	2.78020	2.18230	HepG2	UTP3
VPS13B	ENSG00000132549.14	607.96340	854.71020	-0.49150	2.84990	1.73240	HepG2	XPO5
VPS13B	ENSG00000132549.14	550.05220	935.39430	-0.76600	7.29920	6.13430	HepG2	XRN2
VPS13B	ENSG00000132549.14	1257.03570	981.75440	0.35650	4.77690	3.93450	HepG2	ZC3H8
VPS13B	ENSG00000132549.14	1439.04080	1650.64200	-0.19790	1.95770	1.46520	K562	AGGF1
VPS13B	ENSG00000132549.14	1189.91910	1813.69100	-0.60810	8.21320	6.27750	K562	AKAP8
VPS13B	ENSG00000132549.14	1274.83320	1720.92210	-0.43290	3.84730	3.17840	K562	AQR
VPS13B	ENSG00000132549.14	1428.00390	1802.05890	-0.33560	4.11620	2.98200	K562	ATP5C1
VPS13B	ENSG00000132549.14	1650.77440	1972.69970	-0.25700	2.43500	1.34400	K562	CCDC124
VPS13B	ENSG00000132549.14	800.91080	991.41300	-0.30780	2.73460	1.43950	K562	DDX6
VPS13B	ENSG00000132549.14	1270.64930	1848.37300	-0.54070	9.67440	7.83190	K562	DKC1
VPS13B	ENSG00000132549.14	697.21070	937.18510	-0.42670	3.09540	2.12700	K562	EFTUD2
VPS13B	ENSG00000132549.14	1624.26380	1386.58350	0.22820	2.20480	1.55180	K562	EIF2S2
VPS13B	ENSG00000132549.14	1488.20260	1003.43640	0.56850	4.81560	3.40340	K562	EIF3D
VPS13B	ENSG00000132549.14	2940.08410	2546.17830	0.20740	2.45010	1.56210	K562	EIF4G2
VPS13B	ENSG00000132549.14	934.20930	1506.90870	-0.68980	9.09440	7.46130	K562	FIP1L1
VPS13B	ENSG00000132549.14	996.42290	785.63000	0.34280	2.71030	1.38750	K562	FUS
VPS13B	ENSG00000132549.14	1105.12320	1847.89280	-0.74170	11.74030	10.15790	K562	GRSF1
VPS13B	ENSG00000132549.14	1589.66330	1238.18560	0.36040	3.48400	2.27320	K562	HNRNPA1
VPS13B	ENSG00000132549.14	1465.33510	1833.35360	-0.32330	2.94870	1.85470	K562	HNRNPL
VPS13B	ENSG00000132549.14	882.45030	1239.42950	-0.49010	3.78510	2.68560	K562	HNRNPM
VPS13B	ENSG00000132549.14	1135.96160	1371.10720	-0.27140	2.55970	1.69910	K562	HNRNPU
VPS13B	ENSG00000132549.14	1295.19970	2043.08260	-0.65760	8.90600	7.49260	K562	HSPD1
VPS13B	ENSG00000132549.14	958.67470	1340.18980	-0.48330	5.18640	4.02660	K562	MAGOH
VPS13B	ENSG00000132549.14	1357.76360	1744.82390	-0.36180	3.63340	2.34590	K562	MAK16
VPS13B	ENSG00000132549.14	1072.65160	1337.46910	-0.31830	2.71210	1.79970	K562	MATR3
VPS13B	ENSG00000132549.14	1443.16330	2042.02500	-0.50080	6.82270	5.27370	K562	MBNL1
VPS13B	ENSG00000132549.14	663.78850	923.44470	-0.47630	3.45510	1.97930	K562	NONO
VPS13B	ENSG00000132549.14	730.41560	962.83890	-0.39860	2.73690	1.32910	K562	NUSAP1
VPS13B	ENSG00000132549.14	1056.11070	1310.03740	-0.31080	2.67500	1.34940	K562	PCBP1
VPS13B	ENSG00000132549.14	856.77160	1710.60420	-0.99750	17.64100	14.99430	K562	PPIG
VPS13B	ENSG00000132549.14	558.48490	911.98920	-0.70750	7.08640	5.88770	K562	PRPF8
VPS13B	ENSG00000132549.14	599.67990	876.74440	-0.54800	4.92490	3.67260	K562	PSIP1
VPS13B	ENSG00000132549.14	2320.04220	2778.10950	-0.26000	2.07130	1.36540	K562	PUF60
VPS13B	ENSG00000132549.14	2279.14550	1703.53050	0.41990	3.99640	3.36130	K562	PUS1
VPS13B	ENSG00000132549.14	912.81710	1248.53190	-0.45180	4.17880	3.12080	K562	RBM22
VPS13B	ENSG00000132549.14	888.48720	1276.47320	-0.52270	6.12590	5.08250	K562	SRSF1
VPS13B	ENSG00000132549.14	772.07280	975.03250	-0.33670	2.44100	1.46210	K562	SRSF4
VPS13B	ENSG00000132549.14	889.61550	1205.53610	-0.43840	3.84800	2.57230	K562	SRSF5
VPS13B	ENSG00000132549.14	890.10920	1246.15640	-0.48540	5.39880	4.19710	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for VPS13B is not available on ENCORE database.

14 RBPs can affect the splicing of VPS13B :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	VPS13B	ENSG00000132549.14	chr8	+	100146462	100146574			100133404	100133673	100146859	100146955	0.21100	0.00278	0.07879	included	K562	PRPF8
SE	VPS13B	ENSG00000132549.14	chr8	+	100519997	100520139			100519364	100519431	100523331	100523740	-0.47400	0.00082	0.06253	excluded	HepG2	TBRG4
SE	VPS13B	ENSG00000132549.14	chr8	+	100146462	100146574			100133404	100133673	100146859	100146955	0.20200	0.00009	0.00150	included	K562	AQR
SE	VPS13B	ENSG00000132549.14	chr8	+	100168776	100168971			100160068	100160238	100182266	100182391	-0.18700	0.00925	0.07632	excluded	K562	AQR
SE	VPS13B	ENSG00000132549.14	chr8	+	100050650	100050794			100025987	100026163	100108539	100108660	-0.16700	0.00001	0.00028	excluded	K562	PUS1
SE	VPS13B	ENSG00000132549.14	chr8	+	100519364	100519431			100515063	100515178	100523331	100523740	-0.38100	0.00041	0.03350	excluded	K562	HNRNPL
SE	VPS13B	ENSG00000132549.14	chr8	+	100519997	100520139			100519364	100519431	100523331	100523740	0.36200	0.00003	0.00168	included	HepG2	SF3A3
RI	VPS13B	ENSG00000132549.14	chr8	+	100883012	100883925			100883012	100883115	100883675	100883925	0.21900	0.00038	0.01130	included	HepG2	IGF2BP3
RI	VPS13B	ENSG00000132549.14	chr8	+	100883012	100883925			100883012	100883115	100883675	100883925	0.22300	0.00132	0.04312	included	HepG2	MATR3
RI	VPS13B	ENSG00000132549.14	chr8	+	100883012	100883925			100883012	100883115	100883675	100883925	0.20800	0.00119	0.02298	included	HepG2	G3BP1
RI	VPS13B	ENSG00000132549.14	chr8	+	100883012	100883925			100883012	100883115	100883675	100883925	0.22400	0.00090	0.02208	included	HepG2	KHSRP
RI	VPS13B	ENSG00000132549.14	chr8	+	100883012	100883925			100883012	100883115	100883675	100883925	0.17300	0.00427	0.04542	included	HepG2	NCBP2
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519364	100519431	100519997	100520139	100515063	100515178	100523331	100523740	-0.30300	0.00635	0.07560	2included	K562	U2AF1
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519322	100519431	100519997	100520139	100515063	100515178	100523331	100523740	-0.34500	0.00174	0.05336	2included	HepG2	SF3A3
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519322	100519431	100519997	100520139	100515063	100515178	100523331	100523740	-0.40900	0.00171	0.02269	2included	HepG2	SFPQ
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519364	100519431	100519997	100520139	100515063	100515178	100523331	100523740	-0.16300	0.00204	0.02580	2included	HepG2	SFPQ
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519322	100519431	100519997	100520139	100515063	100515178	100523331	100523740	0.56800	0.00115	0.06573	1included	HepG2	TBRG4
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519364	100519431	100519997	100520139	100515063	100515178	100523331	100523740	0.39900	0.00000	0.00072	1included	HepG2	TBRG4
MXE	VPS13B	ENSG00000132549.14	chr8	+	100519364	100519431	100519997	100520139	100515063	100515178	100523331	100523740	-0.46500	0.00014	0.00409	2included	K562	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

VPS13B

General Information

Functions

Localization

Domains (AlphaFold: VPS13B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for VPS13B is not avaliable on ENCORE database.

39 proteins are bound to VPS13B RNA:

eCLIP assay for VPS13B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for VPS13B is not available on ENCORE database.

73 RBPs can affect the gene expression of VPS13B :

The Knockdown/knockout RNA-Seq assay for VPS13B is not available on ENCORE database.

14 RBPs can affect the splicing of VPS13B :

The Knockdown/knockout RNA-Seq assay for VPS13B is not avaliable on ENCORE database.