LPCAT2

General Information

Gene Name       : LPCAT2
Gene ID             : ENSG00000087253.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LPCAT2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LPCAT2ENSG00000087253.120.000.000.00ENCSR000AEF
HepG2LPCAT2ENSG00000087253.1211.5417.3614.45ENCSR985KAT
K562LPCAT2ENSG00000087253.124.704.944.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LPCAT2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LPCAT2 RNA is bound by 8 proteins.  







eCLIP assay for LPCAT2 is not avaliable on ENCORE database.





8 proteins are bound to LPCAT2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165554308555543133+5'-UTR,CDS3.827075.84843HepG2DDX3X
chr165554318455543261+CDS4.7479710.34792HepG2DDX3X
chr165554314255543189+CDS3.677083.12080HepG2XPO5
chr165556581055565865+CDS,intron-Proximal3.286894.35314HepG2U2AF2
chr165561304255613111+CDS4.681664.89596HepG2LIN28B
chr165554313355543184+CDS3.842237.30480HepG2DDX3X
chr165561303455613107+CDS4.241773.47885K562LIN28B
chr165559114955591256+intron-Distal5.185564.40618K562PTBP1
chr165557539855575469+intron-Distal3.175424.54315HepG2HNRNPL
chr165554333355543495+intron-Distal,intron-Proximal4.280925.11005HepG2PRPF4
chr165559115055591248+intron-Distal4.161369.41297HepG2PTBP1
chr165554333755543442+intron-Distal,intron-Proximal4.449833.41584HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LPCAT2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LPCAT2 is not available on ENCORE database.

  • 119 RBPs can affect the levels of LPCAT2.  








The Knockdown/knockout RNA-Seq assay for LPCAT2 is not available on ENCORE database.





119 RBPs can affect the gene expression of LPCAT2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LPCAT2ENSG00000087253.7935.31470437.796201.0951016.6134014.32730HepG2AATF
LPCAT2ENSG00000087253.7246.80200492.24740-0.996007.832106.36040HepG2ABCF1
LPCAT2ENSG00000087253.7738.17530429.969700.7796012.7439011.64090HepG2ACO1
LPCAT2ENSG00000087253.7892.80960446.918600.9982011.382309.43770HepG2AKAP8
LPCAT2ENSG00000087253.7394.44890624.51210-0.662903.950502.82980HepG2BCCIP
LPCAT2ENSG00000087253.7329.62370542.69810-0.719304.841903.68200HepG2BCLAF1
LPCAT2ENSG00000087253.7375.14400672.07350-0.841204.198903.47920HepG2BOP1
LPCAT2ENSG00000087253.7538.13680368.910200.544604.283902.77250HepG2BUD13
LPCAT2ENSG00000087253.71759.863601137.339400.629705.156603.80570HepG2CCAR1
LPCAT2ENSG00000087253.7387.76600591.05860-0.608104.325903.37200HepG2CIRBP
LPCAT2ENSG00000087253.7363.21040663.94870-0.8703012.1486010.10090HepG2YBX3
LPCAT2ENSG00000087253.71039.14590827.905400.327801.994101.43160HepG2CELF1
LPCAT2ENSG00000087253.7296.68570574.56230-0.953506.438104.56090HepG2DDX27
LPCAT2ENSG00000087253.71146.78210720.262600.670906.396405.48490HepG2DDX3X
LPCAT2ENSG00000087253.7405.22660614.00120-0.599503.321402.48440HepG2DDX55
LPCAT2ENSG00000087253.71256.31440700.672000.842305.525704.15900HepG2DDX59
LPCAT2ENSG00000087253.7254.87460502.50250-0.979309.652307.90830HepG2DDX5
LPCAT2ENSG00000087253.7814.77410618.671000.397102.181901.62710HepG2DDX6
LPCAT2ENSG00000087253.7313.75550628.83950-1.0031012.3317010.46370HepG2DHX30
LPCAT2ENSG00000087253.7206.61360411.38600-0.9936010.837609.67930HepG2DKC1
LPCAT2ENSG00000087253.7516.97630652.00600-0.334802.502101.82920HepG2DNAJC21
LPCAT2ENSG00000087253.7411.71090646.16400-0.650309.219908.11030HepG2DNAJC2
LPCAT2ENSG00000087253.7990.44750444.899201.1545013.2036010.99540HepG2AGO1
LPCAT2ENSG00000087253.7449.62480594.79260-0.403702.193601.65850HepG2EIF2S1
LPCAT2ENSG00000087253.7225.32840657.33940-1.5446020.0446018.34870HepG2EIF4A3
LPCAT2ENSG00000087253.7474.18400841.34100-0.827209.902308.40770HepG2EIF4G2
LPCAT2ENSG00000087253.7302.67620426.49730-0.494802.609801.54680HepG2ESF1
LPCAT2ENSG00000087253.7637.177301024.26260-0.6848011.2387010.15830HepG2ETF1
LPCAT2ENSG00000087253.71260.50220497.079501.3424019.8415018.11730HepG2FIP1L1
LPCAT2ENSG00000087253.7350.15130618.02680-0.819703.106502.02790HepG2FTO
LPCAT2ENSG00000087253.7992.80890615.212300.690306.355305.36890HepG2G3BP1
LPCAT2ENSG00000087253.7476.08630653.07730-0.456002.851301.94560HepG2G3BP2
LPCAT2ENSG00000087253.7292.46100699.52860-1.258107.114606.11990HepG2GPKOW
LPCAT2ENSG00000087253.71770.81960980.178300.853207.671805.83360HepG2GRSF1
LPCAT2ENSG00000087253.7819.16700410.548300.9965020.6157018.39850HepG2HDGF
LPCAT2ENSG00000087253.7507.69100658.25150-0.374702.379201.77650HepG2HNRNPA1
LPCAT2ENSG00000087253.7394.66130647.25270-0.713709.181107.97330HepG2HNRNPF
LPCAT2ENSG00000087253.7811.32170622.869900.381202.459301.79890HepG2HNRNPK
LPCAT2ENSG00000087253.7318.91800667.56590-1.065705.537404.67840HepG2HNRNPLL
LPCAT2ENSG00000087253.7548.50380727.31650-0.407104.125003.39620HepG2HNRNPU
LPCAT2ENSG00000087253.7749.88380486.769600.623304.247402.71790HepG2HSPD1
LPCAT2ENSG00000087253.7328.08930637.36110-0.9580012.6740011.24130HepG2IGF2BP1
LPCAT2ENSG00000087253.7530.88060742.93450-0.484803.795102.94950HepG2ILF2
LPCAT2ENSG00000087253.7838.36180486.318400.785606.008904.15680HepG2KRR1
LPCAT2ENSG00000087253.7251.78430663.38730-1.3977018.0829016.48320HepG2MAGOH
LPCAT2ENSG00000087253.7520.71970402.426200.371702.321001.57710HepG2MSI2
LPCAT2ENSG00000087253.7411.08870680.65900-0.727503.519402.41740HepG2MTPAP
LPCAT2ENSG00000087253.7526.98600337.889500.641105.705803.96830HepG2NAA15
LPCAT2ENSG00000087253.7967.73950682.835600.503003.672502.94670HepG2NCBP2
LPCAT2ENSG00000087253.7279.78900591.86790-1.080905.681804.63010HepG2NSUN2
LPCAT2ENSG00000087253.7537.74010967.72130-0.847705.531804.24600HepG2PABPC1
LPCAT2ENSG00000087253.71220.18540719.953900.7610015.5558013.82880HepG2PARN
LPCAT2ENSG00000087253.7705.20090583.121200.274101.968501.44280HepG2PCBP1
LPCAT2ENSG00000087253.7511.29670648.71310-0.343402.640701.91950HepG2PPIL4
LPCAT2ENSG00000087253.7430.48050533.95330-0.310802.147701.45890HepG2PRPF4
LPCAT2ENSG00000087253.7875.73350616.652000.505902.637101.44290HepG2PRPF6
LPCAT2ENSG00000087253.7642.07640473.782400.438402.846602.02580HepG2PRPF8
LPCAT2ENSG00000087253.71101.28870593.328100.8922018.8218017.63590HepG2PTBP1
LPCAT2ENSG00000087253.71264.59210842.736100.585406.497705.63600HepG2PUF60
LPCAT2ENSG00000087253.71231.85470894.548700.461506.222405.40710HepG2PUM1
LPCAT2ENSG00000087253.71483.79190893.928100.7310011.8900010.55530HepG2PUM2
LPCAT2ENSG00000087253.7533.23330437.964200.283901.930901.39690HepG2PUS1
LPCAT2ENSG00000087253.71313.08540642.630601.0308014.9760013.68810HepG2QKI
LPCAT2ENSG00000087253.71171.01520566.047101.048708.001806.84140HepG2RAVER1
LPCAT2ENSG00000087253.7782.99750463.399800.756709.229707.78750HepG2RBM15
LPCAT2ENSG00000087253.71629.98960856.101600.9289022.9557021.75430HepG2RBM22
LPCAT2ENSG00000087253.7889.51480583.212900.608906.436605.44790HepG2RBM25
LPCAT2ENSG00000087253.71695.809601022.600700.729606.045703.80750HepG2RBM47
LPCAT2ENSG00000087253.7377.81500609.76030-0.690603.175902.03810HepG2RCC2
LPCAT2ENSG00000087253.7842.17510660.333400.350802.682402.14780HepG2NELFE
LPCAT2ENSG00000087253.7829.93590614.981400.432404.361903.61130HepG2RECQL
LPCAT2ENSG00000087253.7353.73280697.22030-0.9790012.1999010.94560HepG2RPLP0
LPCAT2ENSG00000087253.7327.96250556.09810-0.761804.601103.39320HepG2RPS10
LPCAT2ENSG00000087253.7433.000901062.88860-1.2955015.8320013.97910HepG2RPS3A
LPCAT2ENSG00000087253.7660.27970468.681600.494403.178402.34380HepG2RRP9
LPCAT2ENSG00000087253.7399.09020647.72410-0.698707.247006.27510HepG2SAFB2
LPCAT2ENSG00000087253.7309.73130660.80370-1.093205.812804.82250HepG2SF3B1
LPCAT2ENSG00000087253.7769.06070617.766200.315902.396401.84050HepG2SF3B4
LPCAT2ENSG00000087253.7510.33000807.94390-0.6628010.863509.62420HepG2SLBP
LPCAT2ENSG00000087253.7899.07830755.383600.251101.922101.37000HepG2SMN1
LPCAT2ENSG00000087253.71252.47200735.243700.768404.684903.65690HepG2SNRNP70
LPCAT2ENSG00000087253.71237.05630966.948700.355304.458703.86660HepG2SRFBP1
LPCAT2ENSG00000087253.71180.55740710.898300.731706.337604.76510HepG2SRSF3
LPCAT2ENSG00000087253.71111.64380832.015700.417904.810404.02260HepG2SRSF5
LPCAT2ENSG00000087253.7441.19820635.89760-0.527405.416204.49660HepG2SRSF7
LPCAT2ENSG00000087253.7874.52320524.566700.7373012.7388011.70870HepG2SRSF9
LPCAT2ENSG00000087253.7199.62850839.56380-2.0723064.3041062.65430HepG2SSB
LPCAT2ENSG00000087253.7875.07050484.822700.851808.532506.45990HepG2SSRP1
LPCAT2ENSG00000087253.7219.50670332.12830-0.597502.894501.63340HepG2STAU1
LPCAT2ENSG00000087253.71729.65400946.285400.8700026.2252024.63170HepG2SUCLG1
LPCAT2ENSG00000087253.7315.60520611.26640-0.953707.707306.67120HepG2SUPV3L1
LPCAT2ENSG00000087253.71007.53990579.531500.7978013.2166012.12780HepG2TAF15
LPCAT2ENSG00000087253.7804.81830532.552600.595606.428905.16110HepG2TIA1
LPCAT2ENSG00000087253.7271.26780706.82920-1.3816025.3041024.07850HepG2TIAL1
LPCAT2ENSG00000087253.7978.95410568.428800.784205.937503.83310HepG2TRA2A
LPCAT2ENSG00000087253.7481.20590713.03470-0.567307.023906.19660HepG2TRIM56
LPCAT2ENSG00000087253.7502.94260343.366100.550503.183501.50430HepG2TROVE2
LPCAT2ENSG00000087253.7548.71990425.289000.367501.927001.39180HepG2U2AF1
LPCAT2ENSG00000087253.7476.12440361.119700.398802.311501.61660HepG2UCHL5
LPCAT2ENSG00000087253.7312.40190559.83230-0.841604.901603.54320HepG2UPF2
LPCAT2ENSG00000087253.7565.14780366.157800.626106.540405.00330HepG2UTP18
LPCAT2ENSG00000087253.7652.57190343.920800.9240014.4347013.22780HepG2UTP3
LPCAT2ENSG00000087253.7834.75920556.687200.584403.172701.81380HepG2XRCC5
LPCAT2ENSG00000087253.7894.56850622.538000.522903.018701.90850HepG2XRCC6
LPCAT2ENSG00000087253.7295.16660601.72360-1.027609.437108.11850HepG2XRN2
LPCAT2ENSG00000087253.7172.15480327.66920-0.928506.237605.41640K562AQR
LPCAT2ENSG00000087253.7374.87350225.702500.731906.336805.31390K562EIF2S2
LPCAT2ENSG00000087253.7137.04170235.45530-0.780804.512103.50640K562EIF3G
LPCAT2ENSG00000087253.7129.83250232.16300-0.838505.045703.93540K562EIF4A3
LPCAT2ENSG00000087253.7135.65770209.06460-0.624003.371002.07230K562EIF4B
LPCAT2ENSG00000087253.7309.78540441.04310-0.509703.578002.51100K562EIF4G2
LPCAT2ENSG00000087253.7165.61480246.59080-0.574302.728701.88580K562FIP1L1
LPCAT2ENSG00000087253.7474.81060259.316800.872506.027404.75390K562FMR1
LPCAT2ENSG00000087253.7165.03080241.43780-0.548902.833902.22280K562FXR1
LPCAT2ENSG00000087253.7349.90890243.343600.523902.825002.02190K562GPKOW
LPCAT2ENSG00000087253.7394.17430300.814400.389901.943101.30340K562GRSF1
LPCAT2ENSG00000087253.7167.59600264.95360-0.660803.856502.59020K562HNRNPA1
LPCAT2ENSG00000087253.7431.39220269.404800.679103.222401.50620K562HNRNPAB
LPCAT2ENSG00000087253.7194.28880293.42750-0.594803.731402.69270K562HNRNPU
LPCAT2ENSG00000087253.7307.42730207.775100.565102.287101.44720K562KRR1
LPCAT2ENSG00000087253.7118.61910193.41020-0.705303.102101.54090K562LIN28B
LPCAT2ENSG00000087253.7183.68140309.11630-0.750903.789902.79710K562MAGOH
LPCAT2ENSG00000087253.7214.40210308.52440-0.525102.269801.44060K562MATR3
LPCAT2ENSG00000087253.7178.75230300.30850-0.748503.814503.04620K562PTBP1
LPCAT2ENSG00000087253.7686.29500481.220100.512003.645802.71140K562PUF60
LPCAT2ENSG00000087253.7793.94870501.517200.662608.511106.80170K562PUM2
LPCAT2ENSG00000087253.786.38630155.99430-0.852603.499402.38810K562RCC2
LPCAT2ENSG00000087253.7327.91370244.303900.424502.314401.56310K562SF3A3
LPCAT2ENSG00000087253.7182.54560249.95430-0.453402.133401.38460K562SF3B4
LPCAT2ENSG00000087253.7203.40980297.98420-0.550802.351101.69630K562TARDBP
LPCAT2ENSG00000087253.7778.24510542.512400.520504.954703.08610K562UBE2L3
LPCAT2ENSG00000087253.7501.81510262.510500.9347011.7939010.43890K562UPF1
LPCAT2ENSG00000087253.7152.12850233.58570-0.618703.538002.58900K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LPCAT2 is not available on ENCORE database.





4 RBPs can affect the splicing of LPCAT2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELPCAT2ENSG00000087253.7chr16+5556078255560917555594195555955955562288555625060.194000.005690.08371includedHepG2U2AF1
SELPCAT2ENSG00000087253.7chr16+5556078255560998555594195555955955562288555625060.156000.001830.03258includedK562U2AF2
SELPCAT2ENSG00000087253.7chr16+5556078255560917555594195555955955562288555625060.107000.000430.02218includedHepG2HNRNPU
MXELPCAT2ENSG00000087253.7chr16+55565732555657755556582555565886555637465556385955566735555667940.076000.001750.079011includedHepG2XPO5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LPCAT2 is not avaliable on ENCORE database.