USMG5

General Information

Gene Name       : USMG5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: USMG5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for USMG5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • USMG5 RNA is bound by 18 proteins.  







eCLIP assay for USMG5 is not avaliable on ENCORE database.





18 proteins are bound to USMG5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10105148871105148921-3'-UTR,intron-Distal4.2986517.42143HepG2LARP4
chr10105148874105148921-3'-UTR,intron-Distal3.136845.72406K562IGF2BP2
chr10105148886105148923-3'-UTR,intron-Distal3.4611615.71144K562PABPC4
chr10105148818105148856-3'-UTR,intron-Distal4.885066.34419K562PUM2
chr10105152192105152224-3'-UTR,CDS,intron-Distal,intron-Proximal3.118863.50904K562LIN28B
chr10105151849105151949-3'-UTR,intron-Distal,intron-Proximal5.085046.22530K562AQR
chr10105151952105151972-3'-UTR,CDS,intron-Distal3.599814.74431HepG2LARP4
chr10105151949105152000-3'-UTR,CDS,intron-Distal3.2631510.89155K562PABPC4
chr10105151948105151995-3'-UTR,CDS,intron-Distal4.043625.00403K562IGF2BP1
chr10105152215105152223-3'-UTR,intron-Distal3.7326133.12182K562DDX3X
chr10105156165105156198-5'-UTR,intron-Distal3.261293.37451K562APOBEC3C
chr10105156118105156193-5'-UTR,intron-Distal4.7588718.47587HepG2PRPF8
chr10105154109105154118-5'-UTR,intron-Distal6.5407821.37440K562DGCR8
chr10105154056105154083-5'-UTR,intron-Distal7.68457101.97467HepG2DGCR8
chr10105154102105154119-5'-UTR,intron-Distal6.3171920.53637HepG2DGCR8
chr10105156164105156203-5'-UTR,intron-Distal,intron-Proximal3.633945.61746K562LIN28B
chr10105156163105156205-5'-UTR,intron-Distal,intron-Proximal4.410653.24327K562EIF3G
chr10105154054105154108-5'-UTR,intron-Distal9.31185149.04027K562DGCR8
chr10105156165105156203-5'-UTR,intron-Distal,intron-Proximal4.2327055.02606K562DDX3X
chr10105154120105154152-5'-UTR,intron-Distal,intron-Proximal3.572715.44324HepG2DROSHA
chr10105156167105156201-5'-UTR,intron-Distal,intron-Proximal5.141715.79239K562GEMIN5
chr10105154083105154094-5'-UTR,intron-Distal6.8640958.65695HepG2DGCR8
chr10105152006105152041-CDS,intron-Distal,intron-Proximal3.730179.41336K562IGF2BP1
chr10105152011105152040-CDS,intron-Distal,intron-Proximal4.318178.02139HepG2LARP4
chr10105152021105152036-CDS,intron-Distal,intron-Proximal3.8166618.61288K562YBX3
chr10105151972105151996-CDS,intron-Distal4.122014.91517HepG2LARP4
chr10105152127105152152-CDS,intron-Distal,intron-Proximal3.643686.25289K562IGF2BP1
chr10105152012105152040-CDS,intron-Distal,intron-Proximal3.305223.86182K562APOBEC3C
chr10105152036105152040-CDS,intron-Distal,intron-Proximal3.9760918.10358K562YBX3
chr10105152127105152143-CDS,intron-Distal,intron-Proximal4.374864.31786K562IGF2BP2
chr10105152015105152040-CDS,intron-Distal,intron-Proximal3.3242914.39016K562PABPC4
chr10105152193105152215-CDS,intron-Distal3.8638629.55597K562DDX3X
chr10105152126105152150-CDS,intron-Distal,intron-Proximal4.028806.88182HepG2LARP4
chr10105151996105152041-CDS,intron-Distal,intron-Proximal4.406199.23305K562IGF2BP2
chr10105152127105152150-CDS,intron-Distal,intron-Proximal3.3082513.11774K562PABPC4
chr10105152127105152159-CDS,intron-Distal,intron-Proximal3.8182317.30373K562YBX3
chr10105150620105150735-intron-Distal3.354957.61543HepG2U2AF2
chr10105152299105152371-intron-Distal,intron-Proximal3.636143.06150K562KHSRP
chr10105155923105156085-intron-Distal,intron-Proximal5.4504514.55780HepG2EFTUD2
chr10105154398105154496-intron-Distal4.311517.30450K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for USMG5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for USMG5 is not available on ENCORE database.

  • 86 RBPs can affect the levels of USMG5.  








The Knockdown/knockout RNA-Seq assay for USMG5 is not available on ENCORE database.





86 RBPs can affect the gene expression of USMG5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
USMG5ENSG00000173915.81676.762901252.167100.421202.823802.28650HepG2AKAP1
USMG5ENSG00000173915.81100.95090629.055100.8074012.5836011.13620HepG2CALR
USMG5ENSG00000173915.8769.74830604.648800.348203.507702.77450HepG2CKAP4
USMG5ENSG00000173915.8551.61890700.10340-0.343901.980201.38760HepG2CPSF6
USMG5ENSG00000173915.81086.29100915.301100.247002.214601.62890HepG2CELF1
USMG5ENSG00000173915.8599.42710457.415700.390002.486001.62320HepG2DDX24
USMG5ENSG00000173915.81541.563101199.467900.361902.461401.86830HepG2DDX3X
USMG5ENSG00000173915.8710.06890990.51650-0.480203.493502.83210HepG2EIF2S1
USMG5ENSG00000173915.8809.952601094.62200-0.434502.751702.11420HepG2EIF4A3
USMG5ENSG00000173915.8955.811601197.92470-0.325703.260702.61660HepG2ETF1
USMG5ENSG00000173915.8826.23510590.980400.483304.338003.29440HepG2EWSR1
USMG5ENSG00000173915.8614.03740445.615100.462402.499501.40760HepG2FASTKD2
USMG5ENSG00000173915.8869.328601104.47380-0.345402.178101.56070HepG2FXR1
USMG5ENSG00000173915.8827.340301087.70920-0.394702.725101.84250HepG2G3BP2
USMG5ENSG00000173915.8712.145401037.49330-0.542904.848403.94380HepG2HNRNPK
USMG5ENSG00000173915.8357.73660604.50950-0.756905.162203.45470HepG2KRR1
USMG5ENSG00000173915.8882.849001104.85960-0.323601.893301.34540HepG2MAGOH
USMG5ENSG00000173915.8747.03690975.82920-0.385403.503402.64620HepG2NOL12
USMG5ENSG00000173915.8734.433601012.72350-0.463503.374402.58240HepG2PABPC4
USMG5ENSG00000173915.8656.875101000.93300-0.607709.443108.43090HepG2PCBP1
USMG5ENSG00000173915.8380.66180538.60270-0.500704.357003.45220HepG2PPIL4
USMG5ENSG00000173915.8743.12240599.838200.308902.007601.31590HepG2PRPF8
USMG5ENSG00000173915.8704.350401018.49340-0.532107.302806.49720HepG2PTBP1
USMG5ENSG00000173915.8648.35330988.89310-0.6090010.493109.49540HepG2PUM1
USMG5ENSG00000173915.8489.91990616.02840-0.330502.676302.06730HepG2PUS1
USMG5ENSG00000173915.8770.067101103.03940-0.518406.197005.31440HepG2QKI
USMG5ENSG00000173915.81671.479001001.250200.7392015.5140014.49010HepG2RBM22
USMG5ENSG00000173915.8814.994001133.47990-0.475906.227705.47110HepG2NELFE
USMG5ENSG00000173915.8655.408401055.69250-0.6877011.6088010.47730HepG2RECQL
USMG5ENSG00000173915.8435.81790537.77830-0.303302.146101.56610HepG2SAFB2
USMG5ENSG00000173915.8598.55540390.101500.617504.720803.50590HepG2SERBP1
USMG5ENSG00000173915.81000.43850615.570000.700502.935302.23950HepG2SF3A3
USMG5ENSG00000173915.81382.127601130.887300.289303.617503.06820HepG2SRFBP1
USMG5ENSG00000173915.8697.47390919.78770-0.399204.152603.41450HepG2SRSF5
USMG5ENSG00000173915.8725.81610900.44720-0.311003.066402.49090HepG2SRSF9
USMG5ENSG00000173915.8999.83160773.777300.369702.207601.59430HepG2SUPV3L1
USMG5ENSG00000173915.8618.89390994.85100-0.6848010.015509.05490HepG2TAF15
USMG5ENSG00000173915.8641.80710914.11830-0.510205.175604.04450HepG2TIA1
USMG5ENSG00000173915.8413.25690586.82690-0.505904.370003.77100HepG2TIAL1
USMG5ENSG00000173915.8490.87450592.00990-0.270301.847501.36870HepG2TRIM56
USMG5ENSG00000173915.8799.82650457.151300.806909.212907.82760HepG2UCHL5
USMG5ENSG00000173915.8674.04840545.913900.304102.414901.75520HepG2UPF1
USMG5ENSG00000173915.8755.74210561.142600.429404.214202.95370HepG2UTP18
USMG5ENSG00000173915.8746.50450527.062400.502105.536604.73770HepG2UTP3
USMG5ENSG00000173915.8732.83980527.341400.474705.417104.52740HepG2ZC3H8
USMG5ENSG00000173915.8819.74530600.404500.449105.782805.06770HepG2ZNF622
USMG5ENSG00000173915.81995.885701307.201700.6104013.3122012.16790K562AGGF1
USMG5ENSG00000173915.82408.644901360.172600.824307.578106.44950K562AKAP8L
USMG5ENSG00000173915.81678.252802747.71960-0.711309.596508.60830K562AQR
USMG5ENSG00000173915.81725.431901427.091600.273802.524901.65450K562ATP5C1
USMG5ENSG00000173915.81317.843301637.41740-0.313204.113102.92660K562BCLAF1
USMG5ENSG00000173915.8892.191101445.42560-0.696102.063501.31610K562BOP1
USMG5ENSG00000173915.8537.39000889.55030-0.727107.872205.84710K562CCAR1
USMG5ENSG00000173915.8951.411301470.94450-0.628603.438702.23040K562CNOT7
USMG5ENSG00000173915.8860.556801537.05910-0.836802.803602.01620K562CPSF6
USMG5ENSG00000173915.8817.437901242.22510-0.603708.435206.46820K562CSTF2
USMG5ENSG00000173915.82902.180803659.31600-0.334404.006502.82330K562CELF1
USMG5ENSG00000173915.81056.920201292.89100-0.290702.747201.53940K562DDX21
USMG5ENSG00000173915.81665.045902122.13040-0.350002.741202.09320K562DDX47
USMG5ENSG00000173915.8569.98290995.81870-0.805009.296906.73020K562DHX30
USMG5ENSG00000173915.81990.347601463.831800.443205.952904.59870K562DKC1
USMG5ENSG00000173915.8654.41540956.58040-0.547705.110103.27200K562DNAJC21
USMG5ENSG00000173915.81341.850701743.21810-0.377505.020004.09210K562EIF2S2
USMG5ENSG00000173915.8483.06730904.83930-0.905406.624005.01390K562EIF3A
USMG5ENSG00000173915.8927.379401253.48360-0.434703.999003.01390K562EIF4A3
USMG5ENSG00000173915.82297.640902976.18220-0.373305.646404.32710K562EIF4G2
USMG5ENSG00000173915.81101.525001383.92160-0.329302.999601.68070K562EXOSC5
USMG5ENSG00000173915.81270.562501016.270700.322102.933401.54820K562FUS
USMG5ENSG00000173915.81630.203201303.569200.322503.765903.07640K562FXR1
USMG5ENSG00000173915.81401.027701742.54780-0.314702.343601.36030K562HNRNPA1
USMG5ENSG00000173915.8624.427001102.68040-0.820406.421705.54970K562HNRNPC
USMG5ENSG00000173915.81940.505601306.193600.571002.372001.51290K562HNRNPM
USMG5ENSG00000173915.81166.213001929.71400-0.7266015.4366013.42920K562HNRNPU
USMG5ENSG00000173915.8600.54680898.20160-0.580805.034903.03740K562KHDRBS1
USMG5ENSG00000173915.81395.545301866.05510-0.419204.351703.29330K562MAGOH
USMG5ENSG00000173915.82012.302201617.169000.315302.561401.69270K562MBNL1
USMG5ENSG00000173915.81147.792501433.69550-0.320904.033003.07190K562MTPAP
USMG5ENSG00000173915.81939.936601133.509100.775106.882605.26090K562NAA15
USMG5ENSG00000173915.81139.605401593.01440-0.4832010.593309.26310K562NSUN2
USMG5ENSG00000173915.81484.950301823.90510-0.296602.728301.38580K562PCBP1
USMG5ENSG00000173915.82508.922603058.11140-0.285603.062501.55210K562PNPT1
USMG5ENSG00000173915.8897.893901350.25210-0.588607.797506.47700K562POLR2G
USMG5ENSG00000173915.82721.917001802.767600.594302.323201.57260K562PPIG
USMG5ENSG00000173915.81538.530901123.322600.453702.561001.83910K562PRPF8
USMG5ENSG00000173915.82839.522703384.20710-0.253202.933301.94670K562PUM2
USMG5ENSG00000173915.82482.805301349.133300.8798014.3015013.10870K562PUS1
USMG5ENSG00000173915.81979.835801314.348700.590909.274708.21180K562RBM15
USMG5ENSG00000173915.81224.504201738.59960-0.505705.561804.32020K562RBM22
USMG5ENSG00000173915.81149.564901533.32550-0.415603.820101.78040K562RECQL
USMG5ENSG00000173915.8679.44200979.80850-0.528104.911303.19190K562SLBP
USMG5ENSG00000173915.81355.566201610.36130-0.248503.088202.10460K562SRPK2
USMG5ENSG00000173915.81274.105301678.40610-0.397603.618902.38580K562SRSF5
USMG5ENSG00000173915.81244.231501798.79620-0.531805.606604.57920K562TARDBP
USMG5ENSG00000173915.8679.423101573.82520-1.2119024.6804021.16820K562TBRG4
USMG5ENSG00000173915.81190.092601735.12070-0.544007.316405.88190K562TIA1
USMG5ENSG00000173915.8755.357001009.90040-0.419002.223301.38900K562TRIM56
USMG5ENSG00000173915.81202.817301689.10300-0.489809.175307.96130K562UPF1
USMG5ENSG00000173915.81448.954601849.63620-0.352203.490501.60640K562UPF2
USMG5ENSG00000173915.81539.779502299.44180-0.578606.026404.27350K562UTP3
USMG5ENSG00000173915.81079.574001445.31860-0.420904.386403.27550K562WDR3
USMG5ENSG00000173915.81240.450101502.91930-0.276903.520102.57350K562WDR43
USMG5ENSG00000173915.82306.748603095.66160-0.424404.671803.50650K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for USMG5 is not available on ENCORE database.





30 RBPs can affect the splicing of USMG5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.058000.000000.00153excludedK562TAF15
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.106000.000000.00000includedK562SRSF1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.065000.000150.07097includedK562TIA1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.113000.000020.00366includedK562XRCC6
SEUSMG5ENSG00000173915.8chr10-1051539551051541511051521271051522231051561651051562230.074000.000030.01627includedHepG2ILF3
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.074000.000030.04370excludedHepG2TROVE2
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.082000.000040.07010excludedK562LIN28B
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.065000.000140.00262excludedHepG2U2AF2
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.096000.000000.00278excludedK562PHF6
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.055000.001650.01861includedK562AQR
SEUSMG5ENSG00000173915.8chr10-105155502105155789105151947105152040105156165105156198-0.079000.000130.00211excludedK562AQR
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051560541051561980.106000.000330.06629includedK562HNRNPA1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.068000.000480.07246includedHepG2TIA1
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.078000.000020.00419excludedK562SUPV3L1
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.073000.000030.01902excludedK562UCHL5
SEUSMG5ENSG00000173915.8chr10-1051539551051541511051521271051522231051555021051557800.468000.000000.00000includedHepG2FTO
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.096000.000000.00000excludedK562U2AF1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.127000.000000.00000includedHepG2DDX6
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.060000.000020.00574includedHepG2PCBP2
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.058000.000000.00008excludedK562HNRNPL
SEUSMG5ENSG00000173915.8chr10-1051539551051541511051521271051522231051555021051557800.166000.000140.03060includedHepG2RBM15
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.128000.000000.00000includedHepG2SRSF1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.073000.000180.01181includedHepG2PCBP1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.115000.000000.00019includedHepG2TAF15
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.071000.000000.00000excludedK562U2AF2
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156054105156198-0.194000.000050.00335excludedK562TARDBP
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.214000.000000.00000includedK562HNRNPU
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.115000.000020.00780excludedHepG2FUBP3
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.055000.000050.01242excludedK562ZC3H8
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.058000.000000.00003excludedK562HNRNPK
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.152000.000000.00000includedHepG2HNRNPU
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.051000.000140.03757includedHepG2XRCC6
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152127105152223105156165105156198-0.055000.001870.06303excludedHepG2HNRNPC
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.137000.000000.00000includedHepG2SRSF9
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521271051522231051561651051561980.107000.000090.02312includedK562EIF3G
SEUSMG5ENSG00000173915.8chr10-105155502105155789105152138105152223105156165105156198-0.068000.000120.03543excludedK562SERBP1
SEUSMG5ENSG00000173915.8chr10-1051555021051557891051521381051522231051561651051561980.092000.000000.00002includedK562PTBP1
MXEUSMG5ENSG00000173915.8chr10-105153955105154151105155502105155615105152127105152223105156165105156223-0.219000.006400.085632includedHepG2U2AF1
MXEUSMG5ENSG00000173915.8chr10-1051519471051520401051521271051522231051488061051489231051555021051557890.052000.005510.039081includedK562AQR
MXEUSMG5ENSG00000173915.8chr10-105153955105154151105155502105155615105152127105152223105156165105156223-0.068000.001190.018092includedK562U2AF2
MXEUSMG5ENSG00000173915.8chr10-1051519471051520401051521271051522231051488061051489231051561651051562230.120000.000840.021231includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for USMG5 is not avaliable on ENCORE database.