WDR62

General Information

Gene Name       : WDR62
Gene ID             : ENSG00000075702.17
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: WDR62)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDR62ENSG00000075702.172.915.204.05ENCSR000AEF
HepG2WDR62ENSG00000075702.1718.558.3413.45ENCSR985KAT
K562WDR62ENSG00000075702.1717.779.6813.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDR62 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDR62 RNA is bound by 11 proteins.  







eCLIP assay for WDR62 is not avaliable on ENCORE database.





11 proteins are bound to WDR62 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193659211836592190+3'-UTR,CDS3.7120910.14528HepG2PPIG
chr193659051836590565+3'-UTR,CDS,intron-Proximal3.823594.00320K562AQR
chr193659266936592717+3'-UTR,CDS,intron-Proximal4.465815.93840HepG2PRPF8
chr193657390936573981+3'-UTR,CDS,intron-Proximal4.126945.16342K562SF3B4
chr193659221736592268+3'-UTR,CDS,intron-Proximal4.030164.49024K562AQR
chr193659219936592256+3'-UTR,CDS,intron-Proximal4.2184910.95071HepG2PRPF8
chr193659207036592127+3'-UTR,CDS,intron-Proximal3.347433.20886K562PRPF8
chr193657397036574039+3'-UTR,CDS3.275873.75245K562BUD13
chr193657402036574088+3'-UTR,CDS4.821645.86613HepG2PPIG
chr193658140636581472+3'-UTR,CDS,intron-Proximal3.995623.12843K562PRPF8
chr193658139036581458+3'-UTR,CDS,intron-Proximal5.072514.35676HepG2PRPF8
chr193658354636583592+3'-UTR,CDS,intron-Proximal3.853344.49024K562AQR
chr193658792536587978+3'-UTR,CDS,intron-Proximal4.305543.59941K562UCHL5
chr193658494136585067+3'-UTR,CDS,intron-Proximal4.329208.63879K562UCHL5
chr193659391336593967+3'-UTR,CDS3.909235.24452HepG2PPIG
chr193659256336592598+3'-UTR,CDS,intron-Proximal3.454624.77136HepG2PPIG
chr193659164436591688+3'-UTR,CDS,intron-Proximal3.918753.44423K562BUD13
chr193659209336592172+3'-UTR,CDS,intron-Proximal4.929354.65563K562AQR
chr193657414136574222+3'-UTR,CDS,intron-Proximal4.419445.97994K562AQR
chr193659364636593684+3'-UTR,CDS,intron-Proximal3.692755.24452HepG2PPIG
chr193659363036593678+3'-UTR,CDS,intron-Proximal4.509744.35676HepG2PRPF8
chr193658236636582382+3'-UTR,CDS,intron-Proximal5.278567.63570K562AQR
chr193658359036583695+3'-UTR,CDS,intron-Proximal4.832186.85891K562DDX24
chr193654579536545990+5'-UTR,CDS3.745925.03370HepG2NCBP2
chr193657240336572475+CDS,intron-Proximal3.308417.20311HepG2PPIG
chr193655817736558225+CDS,intron-Proximal3.699634.41130K562AQR
chr193655865236558740+CDS,intron-Proximal5.249156.40247K562SF3B4
chr193657239436572467+CDS3.649685.95375K562ZNF622
chr193657237436572479+CDS,intron-Proximal3.706654.41784HepG2GRWD1
chr193655715836557263+CDS,intron-Proximal3.203128.88472HepG2PPIG
chr193655732836557373+CDS,intron-Proximal6.5588120.26131K562AQR
chr193655833936558364+CDS,intron-Proximal4.234826.77156K562AQR
chr193655732636557366+CDS,intron-Proximal5.0267615.47180HepG2PRPF8
chr193654971536549772+CDS3.039584.42661HepG2PPIG
chr193657033936570429+intron-Distal3.497384.57279K562PTBP1
chr193657031136570435+intron-Distal4.010163.09122HepG2PTBP1
chr193655694536557005+intron-Proximal4.619064.68690HepG2PRPF8
chr193657248836572513+intron-Proximal3.992114.98250K562AQR
chr193658238236582411+intron-Proximal5.535848.34710K562AQR
chr193658507336585134+intron-Proximal4.964545.17615K562AQR
chr193655736636557374+intron-Proximal5.253247.59497HepG2PRPF8
chr193655836436558393+intron-Proximal5.331157.81430K562AQR
chr193656261836562666+intron-Proximal3.823594.00320K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDR62 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDR62 is not available on ENCORE database.

  • 115 RBPs can affect the levels of WDR62.  








The Knockdown/knockout RNA-Seq assay for WDR62 is not available on ENCORE database.





115 RBPs can affect the gene expression of WDR62 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDR62ENSG00000075702.12472.26450876.41900-0.892006.520705.53590HepG2AUH
WDR62ENSG00000075702.12299.66690436.79920-0.543603.410102.41530HepG2BCLAF1
WDR62ENSG00000075702.12118.77880834.76870-2.8131034.8924033.18850HepG2BOP1
WDR62ENSG00000075702.12173.36510464.15670-1.4208018.0997016.44860HepG2CALR
WDR62ENSG00000075702.12325.01350575.27010-0.8237012.0489010.85990HepG2CKAP4
WDR62ENSG00000075702.1269.10730133.82260-0.953403.007002.20550HepG2CNOT7
WDR62ENSG00000075702.12309.35660766.33200-1.3087011.8107010.50260HepG2CPSF6
WDR62ENSG00000075702.12161.44130277.56140-0.781803.756502.07970HepG2CSTF2T
WDR62ENSG00000075702.12273.40190509.57020-0.8983012.3253010.93980HepG2DAZAP1
WDR62ENSG00000075702.12436.98650532.12560-0.284202.082201.35010HepG2DDX19B
WDR62ENSG00000075702.12220.03760298.58080-0.440401.937301.35680HepG2DDX21
WDR62ENSG00000075702.12154.83930292.47420-0.917506.451605.06210HepG2DDX24
WDR62ENSG00000075702.12443.02710295.521900.584002.683301.34850HepG2DDX52
WDR62ENSG00000075702.12326.67230870.23660-1.4136012.3181010.35070HepG2DDX59
WDR62ENSG00000075702.12196.40040302.16010-0.621503.573902.46660HepG2DHX30
WDR62ENSG00000075702.12121.20970275.19390-1.182906.411404.74150HepG2AGO1
WDR62ENSG00000075702.1260.67220165.56820-1.448303.897803.20120HepG2EIF2S1
WDR62ENSG00000075702.12816.92440627.925300.379502.841301.65460HepG2EIF2S2
WDR62ENSG00000075702.12289.88330182.915600.664203.142702.46230HepG2EIF4A3
WDR62ENSG00000075702.12280.19160502.75090-0.843409.608808.23090HepG2EIF4G1
WDR62ENSG00000075702.12335.64750481.59810-0.520903.199302.32730HepG2EIF4G2
WDR62ENSG00000075702.12528.83230717.04590-0.439303.032401.89260HepG2ESF1
WDR62ENSG00000075702.12538.528001006.37150-0.902106.641905.77680HepG2ETF1
WDR62ENSG00000075702.12186.44680284.68910-0.610603.263602.03260HepG2FASTKD2
WDR62ENSG00000075702.12270.41050411.44310-0.605503.937602.44210HepG2FKBP4
WDR62ENSG00000075702.12375.93950767.71030-1.030104.805003.47170HepG2FTO
WDR62ENSG00000075702.12757.22990184.725902.0352035.7344033.60920HepG2FXR1
WDR62ENSG00000075702.12297.20720171.270000.795102.009301.43910HepG2G3BP1
WDR62ENSG00000075702.12479.49590868.61170-0.857207.919206.87240HepG2GPKOW
WDR62ENSG00000075702.12355.17570468.32560-0.399002.733601.80300HepG2HNRNPA2B1
WDR62ENSG00000075702.12492.00000669.02330-0.443403.316402.53720HepG2HNRNPF
WDR62ENSG00000075702.12580.46100173.637301.7410017.4296015.83370HepG2HNRNPK
WDR62ENSG00000075702.12255.59210828.93990-1.6974018.4724017.06010HepG2HNRNPLL
WDR62ENSG00000075702.12536.25140349.481000.617606.687105.78200HepG2HNRNPU
WDR62ENSG00000075702.12483.54740658.78550-0.446203.029602.27420HepG2IGF2BP1
WDR62ENSG00000075702.12330.29860163.477301.014603.458002.35820HepG2IGF2BP3
WDR62ENSG00000075702.12279.86810127.627901.132707.533205.47250HepG2KHDRBS1
WDR62ENSG00000075702.12372.64120525.96290-0.497204.931103.57380HepG2KIF1C
WDR62ENSG00000075702.12601.66720184.791201.7030023.2981021.50830HepG2MAGOH
WDR62ENSG00000075702.12562.67040185.797501.5985015.6986014.28720HepG2MATR3
WDR62ENSG00000075702.12445.05480845.59740-0.926004.815703.51400HepG2MTPAP
WDR62ENSG00000075702.12316.71480568.03540-0.842806.573104.72450HepG2NAA15
WDR62ENSG00000075702.12633.29610190.151301.7356023.8718022.13410HepG2NCBP2
WDR62ENSG00000075702.12643.61140505.290500.349002.592701.85540HepG2NOL12
WDR62ENSG00000075702.12356.27410735.07570-1.044909.442008.11910HepG2NSUN2
WDR62ENSG00000075702.12348.55900201.787600.788506.865605.97850HepG2PCBP1
WDR62ENSG00000075702.12429.21630236.580600.859305.468203.75700HepG2PKM
WDR62ENSG00000075702.12372.78240555.36010-0.575105.962704.87180HepG2PRPF4
WDR62ENSG00000075702.12241.95310381.16300-0.655704.254003.27580HepG2PRPF8
WDR62ENSG00000075702.12594.44440205.330701.5335029.6208028.20820HepG2PTBP1
WDR62ENSG00000075702.12653.13600512.050000.351003.449002.80160HepG2PUM1
WDR62ENSG00000075702.12850.94470586.016500.538007.436006.50780HepG2PUS1
WDR62ENSG00000075702.12304.99920222.369200.455702.245801.67300HepG2QKI
WDR62ENSG00000075702.12469.17430763.82810-0.703106.560105.31070HepG2RBM15
WDR62ENSG00000075702.12250.52820841.11420-1.7473015.8212014.78840HepG2RBM22
WDR62ENSG00000075702.12236.34410129.286700.870204.027102.19410HepG2RBM47
WDR62ENSG00000075702.12706.45050228.509801.6282034.0440032.60220HepG2NELFE
WDR62ENSG00000075702.12567.34730212.832201.4144024.1664022.65870HepG2RECQL
WDR62ENSG00000075702.12120.18400720.87430-2.5845030.3530028.61940HepG2RPLP0
WDR62ENSG00000075702.12123.20490377.02910-1.6136016.0007014.39150HepG2RRP9
WDR62ENSG00000075702.12964.85010642.089700.587403.647602.86990HepG2SF3A3
WDR62ENSG00000075702.12331.48380820.43750-1.3075014.0115012.55260HepG2SF3B1
WDR62ENSG00000075702.12410.03920213.768200.939608.656507.70060HepG2SF3B4
WDR62ENSG00000075702.12357.79190462.52370-0.370402.528201.85300HepG2SLBP
WDR62ENSG00000075702.12234.19060912.89830-1.9628014.9708013.16980HepG2SNRNP70
WDR62ENSG00000075702.12183.88010949.96140-2.3691021.9200020.86040HepG2SRFBP1
WDR62ENSG00000075702.12336.45340470.79310-0.484702.999201.31280HepG2SRP68
WDR62ENSG00000075702.12523.42740223.130801.2300017.9182016.93480HepG2SRSF1
WDR62ENSG00000075702.12605.90550882.93360-0.543202.246501.35630HepG2SRSF3
WDR62ENSG00000075702.12648.94450476.266500.446204.401503.64530HepG2SRSF5
WDR62ENSG00000075702.12351.30820657.33310-0.903908.226807.13540HepG2SRSF7
WDR62ENSG00000075702.12563.11000824.71080-0.550503.602703.03410HepG2SSB
WDR62ENSG00000075702.12331.57180558.28610-0.751705.752504.03890HepG2STAU1
WDR62ENSG00000075702.12902.76410541.635100.7369013.3263012.13070HepG2SUCLG1
WDR62ENSG00000075702.12328.36810564.39910-0.781407.660606.15080HepG2SUPT6H
WDR62ENSG00000075702.12132.58080492.07870-1.8920017.7034016.24700HepG2SUPV3L1
WDR62ENSG00000075702.12288.87840200.567200.526301.931401.44820HepG2TAF15
WDR62ENSG00000075702.12317.40520808.18590-1.3484012.9896011.59910HepG2TARDBP
WDR62ENSG00000075702.12398.73900193.939701.039702.517501.49590HepG2TBRG4
WDR62ENSG00000075702.12179.48510329.78710-0.877705.640504.28810HepG2TFIP11
WDR62ENSG00000075702.12181.32890339.57530-0.905107.794507.03320HepG2TIAL1
WDR62ENSG00000075702.12349.92800227.268600.622603.184001.50430HepG2TROVE2
WDR62ENSG00000075702.12677.15070471.256300.522904.500703.35330HepG2TUFM
WDR62ENSG00000075702.12456.78500715.00190-0.646405.184704.33930HepG2U2AF1
WDR62ENSG00000075702.12396.43750569.43720-0.522405.190704.28220HepG2UPF1
WDR62ENSG00000075702.12596.94280298.606400.999207.848306.14770HepG2XRCC6
WDR62ENSG00000075702.12400.19010548.06800-0.453704.185103.38560HepG2ZC3H8
WDR62ENSG00000075702.12185.23330626.26940-1.7574043.0295041.54360HepG2ZNF622
WDR62ENSG00000075702.121714.637701404.530400.287702.361101.75630K562AKAP8L
WDR62ENSG00000075702.121604.500901258.462400.350404.652503.06160K562DDX21
WDR62ENSG00000075702.121961.289201511.261200.375905.524204.23320K562DKC1
WDR62ENSG00000075702.12969.75620673.828200.525104.382003.21660K562EFTUD2
WDR62ENSG00000075702.121266.33560826.798000.615003.558902.40370K562EIF3A
WDR62ENSG00000075702.12596.81600364.220000.712407.662906.34370K562EIF3G
WDR62ENSG00000075702.121043.07940666.101500.646909.684907.39290K562EIF4B
WDR62ENSG00000075702.12828.45140645.651200.359603.052001.67850K562EWSR1
WDR62ENSG00000075702.12378.82370709.34980-0.905008.751706.57100K562FKBP4
WDR62ENSG00000075702.121245.35190769.230800.6950012.2372011.05770K562FXR1
WDR62ENSG00000075702.12526.88470387.200100.444302.743601.31930K562G3BP1
WDR62ENSG00000075702.12112.57660267.29020-1.247505.243304.19880K562G3BP2
WDR62ENSG00000075702.121253.702601618.22810-0.368203.352902.52370K562GRSF1
WDR62ENSG00000075702.121033.090901464.22920-0.503204.902303.85190K562HSPD1
WDR62ENSG00000075702.12866.65390405.338001.096205.381003.75230K562IGF2BP2
WDR62ENSG00000075702.12576.46730849.28110-0.559004.425502.53060K562ILF3
WDR62ENSG00000075702.12323.78280592.49470-0.871806.514105.01750K562KRR1
WDR62ENSG00000075702.12952.49070728.412100.386903.260401.56490K562LSM11
WDR62ENSG00000075702.12933.87650425.615901.1336012.9248011.00600K562MAGOH
WDR62ENSG00000075702.121893.133301426.821200.407903.326202.11610K562MAK16
WDR62ENSG00000075702.12567.98460424.694900.419302.524601.64630K562MATR3
WDR62ENSG00000075702.121607.667302079.41260-0.371203.331602.08840K562MSI2
WDR62ENSG00000075702.12624.42220416.216800.585103.723102.14890K562PCBP1
WDR62ENSG00000075702.12739.05670378.623700.964805.986004.53140K562PCBP2
WDR62ENSG00000075702.12988.84580413.540801.2576023.7570021.89200K562PTBP1
WDR62ENSG00000075702.121755.346302263.88420-0.367003.479602.27500K562PUM1
WDR62ENSG00000075702.122383.020401392.778700.7747012.1798011.08730K562PUS1
WDR62ENSG00000075702.12443.67830298.913700.569704.406002.11310K562QKI
WDR62ENSG00000075702.122117.174401357.160800.6414013.0312011.74160K562RBM15
WDR62ENSG00000075702.12708.67820396.329500.838307.469106.00030K562RBM22
WDR62ENSG00000075702.12583.32060386.503900.593704.269402.41490K562RBM34
WDR62ENSG00000075702.121406.47320929.160300.598006.036304.43140K562SAFB
WDR62ENSG00000075702.121248.234401561.68050-0.323203.920902.95950K562SF3A3
WDR62ENSG00000075702.12448.25650277.750300.690406.159904.84770K562SF3B4
WDR62ENSG00000075702.121657.575301066.797400.635702.579901.34050K562SFPQ
WDR62ENSG00000075702.12976.92990633.414200.625006.600504.81740K562SRFBP1
WDR62ENSG00000075702.12786.01870405.450300.9549010.478409.11650K562SRSF1
WDR62ENSG00000075702.12828.18180579.819300.514203.721302.47350K562SRSF4
WDR62ENSG00000075702.12588.52120383.022400.619603.377802.19820K562SRSF5
WDR62ENSG00000075702.12974.078601417.00580-0.540705.471503.51860K562SSRP1
WDR62ENSG00000075702.12868.00490634.774600.451402.913501.86860K562SUPV3L1
WDR62ENSG00000075702.121260.133701045.928200.268702.111201.39260K562SYNCRIP
WDR62ENSG00000075702.12789.20950410.250700.943806.992205.81750K562TARDBP
WDR62ENSG00000075702.12730.25650395.757100.883705.488004.27350K562TIA1
WDR62ENSG00000075702.12660.73790388.572100.765803.871602.54750K562TRA2A
WDR62ENSG00000075702.12955.76870748.333600.352902.542301.64230K562TRIM56
WDR62ENSG00000075702.121186.040601435.99920-0.275902.208901.42740K562WDR3
WDR62ENSG00000075702.121271.646401699.44220-0.418404.248803.14130K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDR62 is not available on ENCORE database.





9 RBPs can affect the splicing of WDR62 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDR62ENSG00000075702.12chr19+365624573656261836558729365589123656424336564433-0.411000.002220.03948excludedK562SF3B4
SEWDR62ENSG00000075702.12chr19+365940573659410936593849365939763659424436594883-0.145000.000200.00516excludedHepG2U2AF1
SEWDR62ENSG00000075702.12chr19+365823033658236736582101365822133658359036583713-0.234000.000620.00935excludedHepG2U2AF2
SEWDR62ENSG00000075702.12chr19+365624573656261836558729365589123656424336564433-0.159000.011010.08765excludedK562AQR
SEWDR62ENSG00000075702.12chr19+365624573656261836558729365589123656424336564433-0.341000.005320.07627excludedK562U2AF2
SEWDR62ENSG00000075702.12chr19+365925653659267636592115365922193659291536593053-0.133000.000750.02192excludedK562RBM15
SEWDR62ENSG00000075702.12chr19+365624573656261836558729365589123656424336564433-0.136000.000320.01143excludedK562AGGF1
SEWDR62ENSG00000075702.12chr19+365823033658236736582101365822133658359036583713-0.105000.002800.04419excludedK562HNRNPC
A3SSWDR62ENSG00000075702.12chr19+365936383659375336593653365937533659291536593053-0.330000.000150.02387shorterK562FXR1
A3SSWDR62ENSG00000075702.12chr19+3657227936572472365723343657247236564243365644330.056000.002180.01390longerK562AQR
A5SSWDR62ENSG00000075702.12chr19+3655086936551019365508693655093236556859365569170.135000.001110.02037longerK562AQR
MXEWDR62ENSG00000075702.12chr19+36583590365837133658493236585066365821013658221336587928365879810.264000.001330.045141includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDR62 is not avaliable on ENCORE database.