HSD17B2

General Information

Gene Name       : HSD17B2
Gene ID             : ENSG00000086696.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HSD17B2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HSD17B2ENSG00000086696.100.000.000.00ENCSR000AEF
HepG2HSD17B2ENSG00000086696.1022.8127.5325.17ENCSR985KAT
K562HSD17B2ENSG00000086696.100.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HSD17B2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HSD17B2 RNA is bound by 6 proteins.  







eCLIP assay for HSD17B2 is not avaliable on ENCORE database.





6 proteins are bound to HSD17B2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168213171582131778+CDS4.960157.63354HepG2SND1
chr168212448982124542+CDS,intron-Proximal4.750395.13577HepG2U2AF2
chr168213180982131936+CDS3.522395.77201HepG2SND1
chr168212452682124582+CDS4.563384.23209HepG2SND1
chr168210469082104738+CDS,intron-Proximal3.249993.57831HepG2SND1
chr168207808382078137+intron-Distal3.892573.04224HepG2SUGP2
chr168207497782075032+intron-Distal3.920213.79098HepG2SUGP2
chr168211492282115004+intron-Distal5.518317.11021HepG2PTBP1
chr168211280582112897+intron-Distal4.209775.06031HepG2CSTF2
chr168207951982079586+intron-Distal3.384073.46325HepG2SUGP2
chr168210405682104146+intron-Distal4.114453.04956HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HSD17B2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HSD17B2 is not available on ENCORE database.

  • 139 RBPs can affect the levels of HSD17B2.  








The Knockdown/knockout RNA-Seq assay for HSD17B2 is not available on ENCORE database.





139 RBPs can affect the gene expression of HSD17B2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HSD17B2ENSG00000086696.6643.54490367.769200.807104.760602.57030HepG2AARS
HSD17B2ENSG00000086696.699.97700582.78690-2.5433049.1597045.87730HepG2AATF
HSD17B2ENSG00000086696.6129.01680698.51730-2.4367049.0689047.29630HepG2ACO1
HSD17B2ENSG00000086696.6120.419502573.41140-4.41750166.29310163.35120HepG2AKAP1
HSD17B2ENSG00000086696.6346.00670929.73560-1.4260021.8498019.24790HepG2AKAP8
HSD17B2ENSG00000086696.6341.74020818.08870-1.259407.173204.26790HepG2APOBEC3C
HSD17B2ENSG00000086696.6981.085502129.30310-1.1179019.6413017.78690HepG2ASCC1
HSD17B2ENSG00000086696.61118.49540674.117300.730405.224704.33070HepG2AUH
HSD17B2ENSG00000086696.6640.66620385.377300.733207.889706.68380HepG2CALR
HSD17B2ENSG00000086696.6195.98220548.99070-1.4861015.4778013.33510HepG2CCAR1
HSD17B2ENSG00000086696.62644.474102022.977700.386403.374802.52570HepG2CIRBP
HSD17B2ENSG00000086696.61054.90260698.247800.5952010.339709.22140HepG2CKAP4
HSD17B2ENSG00000086696.6309.36150145.134101.091804.664703.79260HepG2CPSF6
HSD17B2ENSG00000086696.6117.08910231.73730-0.984906.257504.73700HepG2CSTF2
HSD17B2ENSG00000086696.6593.33050718.47380-0.276101.913701.36020HepG2CELF1
HSD17B2ENSG00000086696.61681.69890772.490301.1222045.6699043.39160HepG2DAZAP1
HSD17B2ENSG00000086696.6516.81120645.97430-0.321802.851302.00470HepG2DDX19B
HSD17B2ENSG00000086696.6280.47780642.78550-1.1965016.4657014.98000HepG2DDX21
HSD17B2ENSG00000086696.6483.12310279.438400.789805.770203.85830HepG2DDX28
HSD17B2ENSG00000086696.61821.310502465.17910-0.436703.718503.00400HepG2DDX3X
HSD17B2ENSG00000086696.61468.90390801.219900.8744013.7953011.30590HepG2DDX47
HSD17B2ENSG00000086696.6100.69930488.41370-2.2780017.7381014.85720HepG2DDX52
HSD17B2ENSG00000086696.6138.93850368.93830-1.4089012.2447010.75980HepG2DDX55
HSD17B2ENSG00000086696.61003.83210554.572500.8560010.752408.91800HepG2DDX5
HSD17B2ENSG00000086696.6681.699702117.53240-1.6352033.0268031.23790HepG2DDX6
HSD17B2ENSG00000086696.6659.22290459.048000.522005.279704.33530HepG2DNAJC21
HSD17B2ENSG00000086696.6321.28360455.02480-0.502104.544303.74400HepG2DNAJC2
HSD17B2ENSG00000086696.6357.38460582.83250-0.705603.409002.39400HepG2EEF2
HSD17B2ENSG00000086696.6349.33240523.49870-0.583604.954403.41650HepG2EIF2S2
HSD17B2ENSG00000086696.6196.71680473.18450-1.266307.422006.00330HepG2EIF3D
HSD17B2ENSG00000086696.61642.815702249.78560-0.453603.392102.68600HepG2EIF4A3
HSD17B2ENSG00000086696.6641.905802190.38360-1.7708030.6794028.58940HepG2EIF4B
HSD17B2ENSG00000086696.61309.65700762.148200.7809017.0494015.34350HepG2EIF4G1
HSD17B2ENSG00000086696.62692.21340730.082201.8826043.9433041.28540HepG2EIF4G2
HSD17B2ENSG00000086696.6389.71970597.84780-0.617305.207303.75280HepG2ESF1
HSD17B2ENSG00000086696.6462.33610773.83450-0.743101.970601.44430HepG2ETF1
HSD17B2ENSG00000086696.6526.68710682.47170-0.373802.615601.80270HepG2EWSR1
HSD17B2ENSG00000086696.6362.63140575.17290-0.665505.197002.88070HepG2EXOSC9
HSD17B2ENSG00000086696.6947.29610612.641000.628706.937405.27640HepG2FASTKD2
HSD17B2ENSG00000086696.6145.41390697.00870-2.2610030.0210028.00510HepG2FIP1L1
HSD17B2ENSG00000086696.6452.34650145.418001.637104.747803.42460HepG2FTO
HSD17B2ENSG00000086696.6925.589201537.43820-0.7321011.072209.54720HepG2FUBP3
HSD17B2ENSG00000086696.6111.94330730.02220-2.7052044.2334040.93990HepG2FUS
HSD17B2ENSG00000086696.6404.872202269.78340-2.4870080.0826077.08710HepG2FXR1
HSD17B2ENSG00000086696.6458.527802105.63900-2.1992059.3965056.55760HepG2G3BP1
HSD17B2ENSG00000086696.61496.186602235.29850-0.579206.341404.98430HepG2G3BP2
HSD17B2ENSG00000086696.6144.54070421.32580-1.5435010.560508.88150HepG2GEMIN5
HSD17B2ENSG00000086696.6681.60640164.474502.0510013.5338012.22040HepG2GPKOW
HSD17B2ENSG00000086696.6232.58960810.94080-1.8018023.5012020.47820HepG2GRSF1
HSD17B2ENSG00000086696.6285.18100666.81270-1.2254025.3396022.88090HepG2HDGF
HSD17B2ENSG00000086696.61493.99340740.892901.0117010.673007.93890HepG2HNRNPA0
HSD17B2ENSG00000086696.6367.46530515.50820-0.488403.039702.31770HepG2HNRNPC
HSD17B2ENSG00000086696.6452.21210758.79000-0.746705.584703.45700HepG2HNRNPD
HSD17B2ENSG00000086696.6862.23840234.694501.8772056.3352053.94100HepG2HNRNPF
HSD17B2ENSG00000086696.6966.419002131.95860-1.1415023.1856021.35030HepG2HNRNPK
HSD17B2ENSG00000086696.61017.73150703.665800.532308.799207.66240HepG2HNRNPL
HSD17B2ENSG00000086696.6683.17090156.965302.1217036.7835034.90190HepG2HNRNPLL
HSD17B2ENSG00000086696.677.56910480.77850-2.6318048.5909045.68480HepG2HNRNPM
HSD17B2ENSG00000086696.6239.90380512.09930-1.0940016.7106015.31670HepG2HNRNPU
HSD17B2ENSG00000086696.61098.98670231.105602.2494041.2352038.97170HepG2IGF2BP1
HSD17B2ENSG00000086696.61439.091802140.36520-0.572706.021505.06330HepG2IGF2BP2
HSD17B2ENSG00000086696.6438.873202008.52280-2.1943018.3163016.07490HepG2IGF2BP3
HSD17B2ENSG00000086696.61309.186402152.78710-0.717506.664305.03220HepG2KHSRP
HSD17B2ENSG00000086696.6338.07760508.13960-0.587904.322902.28840HepG2CCAR2
HSD17B2ENSG00000086696.6780.09320638.459200.289002.686501.68000HepG2KIF1C
HSD17B2ENSG00000086696.6601.585801011.49460-0.749605.822603.99900HepG2KRR1
HSD17B2ENSG00000086696.6291.53560579.69320-0.991608.271806.83040HepG2LARP4
HSD17B2ENSG00000086696.6304.20250562.41960-0.886609.035607.10500HepG2LARP7
HSD17B2ENSG00000086696.6598.764702270.57510-1.9230050.4804047.94070HepG2MAGOH
HSD17B2ENSG00000086696.6297.40030476.26800-0.679404.930102.81470HepG2MARK2
HSD17B2ENSG00000086696.6677.305202283.30860-1.7532038.7495036.59770HepG2MATR3
HSD17B2ENSG00000086696.6157.61310495.26880-1.651809.078607.29080HepG2METAP2
HSD17B2ENSG00000086696.664.12730563.91060-3.1365065.9024062.99280HepG2MSI2
HSD17B2ENSG00000086696.6733.055902337.11400-1.6727038.6664036.50460HepG2NCBP2
HSD17B2ENSG00000086696.61451.58700959.256800.597503.707302.05410HepG2NKRF
HSD17B2ENSG00000086696.6206.27290766.00230-1.8928045.4221042.77360HepG2NOL12
HSD17B2ENSG00000086696.6337.26140571.42920-0.760706.025603.09120HepG2NUSAP1
HSD17B2ENSG00000086696.6200.53900353.81540-0.819103.987502.06240HepG2PA2G4
HSD17B2ENSG00000086696.61225.892602081.44720-0.763809.546708.22460HepG2PABPC4
HSD17B2ENSG00000086696.6221.29400506.87800-1.1957018.1440016.32750HepG2PARN
HSD17B2ENSG00000086696.6771.198202160.51810-1.4862070.5237068.21360HepG2PCBP1
HSD17B2ENSG00000086696.6205.15750391.30200-0.931605.684203.94260HepG2PKM
HSD17B2ENSG00000086696.61622.74440785.603501.046509.326406.72310HepG2PNPT1
HSD17B2ENSG00000086696.6374.48050726.44640-0.956007.311805.42160HepG2PRPF6
HSD17B2ENSG00000086696.6514.96110284.534100.855806.468405.29000HepG2PRPF8
HSD17B2ENSG00000086696.6375.99940641.80610-0.771403.635801.60680HepG2PSIP1
HSD17B2ENSG00000086696.6352.960302198.41490-2.63890171.08300168.40040HepG2PTBP1
HSD17B2ENSG00000086696.6511.32190776.24630-0.602308.887407.95290HepG2PUM1
HSD17B2ENSG00000086696.61044.58380775.670200.429303.260002.53180HepG2PUM2
HSD17B2ENSG00000086696.6281.51490711.46800-1.3376025.6889024.16230HepG2PUS1
HSD17B2ENSG00000086696.6374.479302380.92280-2.66860148.49800145.32290HepG2QKI
HSD17B2ENSG00000086696.6321.03620666.81700-1.054606.923605.83490HepG2RAVER1
HSD17B2ENSG00000086696.6565.50460782.01790-0.467704.322303.27970HepG2RBM15
HSD17B2ENSG00000086696.6208.51750646.81220-1.633205.853205.16970HepG2RBM22
HSD17B2ENSG00000086696.61185.608002160.84610-0.8660017.6175016.01660HepG2RBM25
HSD17B2ENSG00000086696.6325.25270678.18400-1.0601012.1745010.08250HepG2RBM27
HSD17B2ENSG00000086696.6530.49130846.10780-0.673504.570802.61670HepG2RBM47
HSD17B2ENSG00000086696.6371.45080550.71510-0.568103.950102.68040HepG2RCC2
HSD17B2ENSG00000086696.6170.860002446.61900-3.83990295.39790292.30360HepG2NELFE
HSD17B2ENSG00000086696.6764.472102278.70350-1.5757078.0556075.77560HepG2RECQL
HSD17B2ENSG00000086696.61011.75050252.846602.0004046.9198044.94240HepG2RPLP0
HSD17B2ENSG00000086696.6100.57880460.37810-2.1945015.9908014.68240HepG2RPS19
HSD17B2ENSG00000086696.6292.92090625.47030-1.0944012.5338010.92600HepG2RPS2
HSD17B2ENSG00000086696.6429.97180281.456000.611203.087302.26320HepG2RRP9
HSD17B2ENSG00000086696.6675.77690456.041100.567305.664504.79570HepG2SAFB2
HSD17B2ENSG00000086696.61051.79390462.142301.1863019.0793016.76260HepG2SERBP1
HSD17B2ENSG00000086696.6730.98990155.337902.2343044.6925042.28990HepG2SF3B1
HSD17B2ENSG00000086696.61035.863002288.82120-1.1438044.4953042.67560HepG2SF3B4
HSD17B2ENSG00000086696.6137.95480504.36360-1.870306.162903.82490HepG2SFPQ
HSD17B2ENSG00000086696.61165.08520650.712400.840203.818901.95120HepG2SLTM
HSD17B2ENSG00000086696.6286.99580531.81100-0.8899012.8027011.57660HepG2SMN1
HSD17B2ENSG00000086696.6793.457502389.03890-1.5902085.1465083.36520HepG2SRSF1
HSD17B2ENSG00000086696.6486.21060721.99950-0.570405.246004.42640HepG2SRSF5
HSD17B2ENSG00000086696.61318.63260230.585002.5156094.4212091.83930HepG2SRSF7
HSD17B2ENSG00000086696.61049.308401943.61480-0.8893029.1165027.69130HepG2SRSF9
HSD17B2ENSG00000086696.6328.76800765.35950-1.2191013.8363011.25340HepG2STIP1
HSD17B2ENSG00000086696.6212.70190821.09730-1.9487058.9867056.81910HepG2SUCLG1
HSD17B2ENSG00000086696.6731.44670470.479800.636506.200004.82840HepG2SUPT6H
HSD17B2ENSG00000086696.6133.40210367.25150-1.4610012.8984011.61750HepG2SUPV3L1
HSD17B2ENSG00000086696.6519.288802147.37550-2.04800102.2002099.41490HepG2TAF15
HSD17B2ENSG00000086696.6455.50060153.115301.5727015.6827014.19270HepG2TARDBP
HSD17B2ENSG00000086696.61768.91200990.705800.836204.362703.04570HepG2TBRG4
HSD17B2ENSG00000086696.61027.631501973.13050-0.9412020.9960018.77130HepG2TIA1
HSD17B2ENSG00000086696.6395.23000497.56240-0.332201.867401.43910HepG2TIAL1
HSD17B2ENSG00000086696.6290.58140669.65540-1.2045010.749408.10680HepG2TRA2A
HSD17B2ENSG00000086696.6599.56540502.050800.256001.812101.33650HepG2TRIM56
HSD17B2ENSG00000086696.6244.48340376.03520-0.621103.137301.47400HepG2TROVE2
HSD17B2ENSG00000086696.6522.21430714.40350-0.452103.440702.45360HepG2TUFM
HSD17B2ENSG00000086696.61062.75560596.130200.834009.327508.16440HepG2U2AF1
HSD17B2ENSG00000086696.6228.88190539.99690-1.238303.898002.71480HepG2U2AF2
HSD17B2ENSG00000086696.6563.99190756.20070-0.423102.139501.40940HepG2UBE2L3
HSD17B2ENSG00000086696.6477.99420216.932501.1396011.481009.95520HepG2UCHL5
HSD17B2ENSG00000086696.6308.24710699.97980-1.1832017.1581015.71070HepG2UPF1
HSD17B2ENSG00000086696.6525.45640719.45740-0.453304.453203.16060HepG2UTP18
HSD17B2ENSG00000086696.6256.37460675.79810-1.3983020.2904018.89220HepG2UTP3
HSD17B2ENSG00000086696.6294.50420655.82610-1.155009.833507.57230HepG2XRCC5
HSD17B2ENSG00000086696.6129.24870733.38440-2.5044039.9224036.89490HepG2XRCC6
HSD17B2ENSG00000086696.61164.37110769.839300.596809.091708.24690HepG2ZNF622
HSD17B2ENSG00000086696.6233.63490666.32050-1.5120017.8026014.57190HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HSD17B2 is not available on ENCORE database.





4 RBPs can affect the splicing of HSD17B2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHSD17B2ENSG00000086696.6chr16+821245068212464482104546821047328213167982132139-0.091000.000000.00002excludedHepG2U2AF2
SEHSD17B2ENSG00000086696.6chr16+821017748210198782069245820692948210454682105586-0.095000.000130.01211excludedHepG2AKAP1
SEHSD17B2ENSG00000086696.6chr16+8212376982123838821045468210473282124506821248170.058000.000020.00455includedHepG2SSB
SEHSD17B2ENSG00000086696.6chr16+821017748210198782069245820692948210454682104732-0.057000.000410.02418excludedHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HSD17B2 is not avaliable on ENCORE database.