RPS6

General Information

Gene Name       : RPS6
Gene ID             : ENSG00000137154.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RPS6)


Antibody Validation

 View validation images for all RPS6 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RPS6ENSG00000137154.123178.912925.173052.04ENCSR000AEF
HepG2RPS6ENSG00000137154.122205.642613.502409.57ENCSR985KAT
K562RPS6ENSG00000137154.121225.291391.261308.28ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 4012ENCSR100ARZRPS6K562ReleasedENCAB305KJDENCSR911RWF  
knockdown followed by RNA-seq RPS6-BGKcLV13-K562ENCSR539PFVRPS6K562ReleasedENCSR712CQC   CRISPRKD% = 82.0,70.1






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
RPS64012K562ENCSR100ARZENCSR911RWFENCAB305KJDA300-556A2ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RPS6ENCAB286NJH701374TH2627537ABGKcLV13-67, Released, ENCODE4
RPS6ENCAB305KJDA300-556A2Released, ENCODE4BGKcLV13-67, Released, ENCODE4
RPS6ENCAB460TSZ701845RF236380pSer240pSer244Released, ENCODE4BGKcLV13-67, Released, ENCODE4
RPS6ENCAB970UUIA300-557A2Released, ENCODE4BGKcLV13-67, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RPS6K562CRISPRENCSR539PFVENCSR712CQCRPS6-BGKcLV13-67,RPS6-BGKcLV13-68NT-BGKcLV13-1,NT-BGKcLV13-282.0,70.1ReleasedENCODE4
RPS6HepG2CRISPRBGHcLV14-67,BGHcLV14-68BGHcLV14-1,BGHcLV14-20.0,0.0NotSatisfiedENCODE4
RPS6HepG2CRISPRBGHcLV22-47,BGHcLV22-48BGHcLV22-1,BGHcLV22-2NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
RPS6Product_ID: A300-556A
Lot_ID: 2
Source: Bethyl Labs
Target Name: RPS6-human		 Bethyl_A300-556A_2_RPS6.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RPS6 specific antibody, A300-556A. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the RPS6-specific antibody, A300-556A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 RPS6-K562-CRISPR.png<br>Caption: Western blot following CRISPR against RPS6 in K562 whole cell lysate using RPS6 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RPS6. RPS6 protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.
RPS6-K562-CRISPR-A300-556A.png<br>Caption: Western blot following CRISPR against RPS6 in K562 whole cell lysate using RPS6 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RPS6. RPS6 protein appears as the green arrow, Tubulin serves as a control and appears in red arrow.
RPS6Product_ID: A300-557A
Lot_ID: 2
Source: Bethyl Labs
Target Name: RPS6-human		 Bethyl_A300-557A_2_RPS6.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RPS6 specific antibody, A300-557A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RPS6-specific antibody, A300-557A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 RPS6-K562-CRISPR-A300-557A.png<br>Caption: Western blot following CRISPR against RPS6 in K562 whole cell lysate using RPS6 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RPS6. RPS6 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
RPS6Product_ID: 701845
Lot_ID: RF236380
Source: Thermo Fisher
Target Name: RPS6phosphoS240phosphoS244-human
Phosphate: pSer240pSer244		 ThermoFisher_701845_RF236380_RPS6pSer240-244.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RPS6 pSer240, Ser244 specific antibody, 701845. Lanes 1 and 3 are 2.5% of five million whole cell lysate input. Lanes 2 and 4 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the RPS6 pSer240, Ser244-specific antibody, 701845. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 RPS6-pSer240pSer244-K562-CRISPR-701845.png<br>Caption: Western blot following CRISPR against RPS6-pSer240pSer244 in K562 whole cell lysate using RPS6-pSer240pSer244 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RPS6-pSer240pSer244. RPS6-pSer240pSer244 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
RPS6Product_ID: 701374
Lot_ID: TH2627537A
Source: Thermo Fisher
Target Name: RPS6-human		 RPS6-K562-CRISPR-701374.png<br>Caption: Western blot following CRISPR against RPS6 in K562 whole cell lysate using RPS6 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RPS6. RPS6 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for RPS6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RPS6 RNA is bound by 42 proteins.  







eCLIP assay for RPS6 is not avaliable on ENCORE database.





42 proteins are bound to RPS6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr91937884519378859-3'-UTR,CDS,intron-Distal5.6282451.24886HepG2TROVE2
chr91937916419379242-3'-UTR,intron-Distal3.8505611.66745K562KHSRP
chr91937889619378903-3'-UTR,CDS,intron-Distal4.88894400.00000K562TROVE2
chr91937618019376243-3'-UTR,intron-Distal,intron-Proximal4.552886.84775HepG2CSTF2
chr91937909319379164-3'-UTR,intron-Distal4.8308612.14549K562KHSRP
chr91937880619378846-3'-UTR,CDS,intron-Distal3.1368546.42714HepG2BCLAF1
chr91937886619378883-3'-UTR,CDS,intron-Distal6.77518400.00000K562TROVE2
chr91937627219376281-3'-UTR,intron-Distal,intron-Proximal3.411723.43531K562APOBEC3C
chr91937930019379337-3'-UTR,intron-Distal3.890143.19904K562TIA1
chr91937888119378898-3'-UTR,CDS,intron-Distal5.7366036.41620HepG2TROVE2
chr91937890319378910-3'-UTR,CDS,intron-Distal4.1790273.65453K562TROVE2
chr91937880719378861-3'-UTR,CDS,intron-Distal3.3438316.67121K562ZNF800
chr91937887319378878-3'-UTR,CDS,intron-Distal6.2699044.20839HepG2TROVE2
chr91937885919378866-3'-UTR,CDS,intron-Distal6.43327400.00000K562TROVE2
chr91937888319378893-3'-UTR,CDS,intron-Distal6.44917400.00000K562TROVE2
chr91937880319378895-3'-UTR,CDS,intron-Distal3.0468925.21179K562GRWD1
chr91937881019378841-3'-UTR,CDS,intron-Distal5.11892400.00000K562TROVE2
chr91937885919378873-3'-UTR,CDS,intron-Distal6.0320349.78307HepG2TROVE2
chr91937880819378845-3'-UTR,CDS,intron-Distal5.1787041.89846HepG2TROVE2
chr91937930219379375-3'-UTR,CDS,intron-Distal3.227246.74629HepG2KHSRP
chr91937896419379006-3'-UTR,intron-Distal,intron-Proximal5.201348.16423HepG2U2AF2
chr91937889819378917-3'-UTR,CDS,intron-Distal,intron-Proximal4.3836620.74746HepG2TROVE2
chr91937889319378896-3'-UTR,CDS,intron-Distal4.96913400.00000K562TROVE2
chr91937894819378996-3'-UTR,intron-Distal,intron-Proximal3.881786.30068HepG2RBM5
chr91937882019378827-3'-UTR,CDS,intron-Distal3.0729245.36382K562YBX3
chr91937891019378916-3'-UTR,CDS,intron-Distal3.9379746.37295K562TROVE2
chr91937884919378859-3'-UTR,CDS,intron-Distal6.03471400.00000K562TROVE2
chr91937884119378849-3'-UTR,CDS,intron-Distal5.46842400.00000K562TROVE2
chr91938011219380139-5'-UTR,intron-Distal4.077677.79506K562AQR
chr91938019119380222-5'-UTR,CDS,intron-Distal,intron-Proximal4.0755759.23364HepG2LARP4
chr91937958219379617-5'-UTR,CDS,intron-Distal,intron-Proximal3.4637556.00476K562DDX3X
chr91938019319380232-5'-UTR,intron-Distal,intron-Proximal3.236074.45555K562NCBP2
chr91938002619380060-5'-UTR,intron-Distal3.293205.36626HepG2EFTUD2
chr91938018819380231-5'-UTR,CDS,intron-Distal,intron-Proximal3.8512224.98043K562GEMIN5
chr91938020019380228-5'-UTR,intron-Distal,intron-Proximal4.033744.52024HepG2PPIG
chr91938010619380164-5'-UTR,intron-Distal4.0316018.86496HepG2BUD13
chr91938019819380230-5'-UTR,intron-Distal,intron-Proximal4.8077520.31461K562LARP4
chr91938014819380162-5'-UTR,intron-Distal4.7453411.43968HepG2AQR
chr91938019619380231-5'-UTR,intron-Distal,intron-Proximal4.4218142.25450K562WRN
chr91937995619380073-5'-UTR,intron-Distal3.317267.79220K562HNRNPM
chr91938021619380229-5'-UTR,intron-Distal,intron-Proximal3.274815.21778K562RBM15
chr91937952819379582-5'-UTR,CDS,intron-Distal3.2001432.44039K562PABPC4
chr91938020019380229-5'-UTR,intron-Distal,intron-Proximal3.082536.26328HepG2TROVE2
chr91938014419380175-5'-UTR,intron-Distal4.8316219.32372K562AQR
chr91938019019380232-5'-UTR,CDS,intron-Distal,intron-Proximal3.4250217.53796K562DHX30
chr91938019119380231-5'-UTR,CDS,intron-Distal,intron-Proximal5.43771400.00000K562PABPC4
chr91938010319380161-5'-UTR,intron-Distal3.650154.77458HepG2RBM22
chr91938019819380230-5'-UTR,intron-Distal,intron-Proximal3.161735.72619K562DROSHA
chr91937954919379564-5'-UTR,CDS,intron-Distal3.6428643.83327K562DDX3X
chr91938020719380232-5'-UTR,intron-Distal,intron-Proximal4.7416338.34091HepG2DDX3X
chr91937958819379635-5'-UTR,CDS,intron-Distal,intron-Proximal5.8054812.49979HepG2AQR
chr91938020819380232-5'-UTR,intron-Distal,intron-Proximal3.4932463.32573K562DDX3X
chr91937948719379533-5'-UTR,CDS,intron-Distal3.334868.63222K562ZNF800
chr91938017519380187-5'-UTR,intron-Distal3.176736.57230K562AQR
chr91937952419379549-5'-UTR,CDS,intron-Distal3.7149960.20818K562DDX3X
chr91937949019379544-5'-UTR,CDS,intron-Distal3.1455615.73660K562GRWD1
chr91938018819380231-5'-UTR,CDS,intron-Distal,intron-Proximal3.142447.08467HepG2ZC3H11A
chr91937994919380036-5'-UTR,intron-Distal3.903064.94813HepG2HNRNPM
chr91938018919380214-5'-UTR,CDS,intron-Distal,intron-Proximal4.748489.29401HepG2AKAP1
chr91937997919380018-5'-UTR,intron-Distal5.048337.93248K562RBM15
chr91937956419379582-5'-UTR,CDS,intron-Distal3.5471444.59428K562DDX3X
chr91937953319379578-5'-UTR,CDS,intron-Distal3.5322335.23849HepG2LARP4
chr91938013519380168-5'-UTR,intron-Distal5.7814425.74207HepG2PRPF8
chr91938016219380179-5'-UTR,intron-Distal4.6894010.73647HepG2AQR
chr91938018719380230-5'-UTR,CDS,intron-Distal,intron-Proximal4.417819.14318HepG2RPS3
chr91938021419380231-5'-UTR,intron-Distal,intron-Proximal5.515329.17081HepG2AKAP1
chr91938018719380191-5'-UTR,CDS,intron-Distal3.6930224.50737K562PABPC4
chr91938018619380228-5'-UTR,CDS,intron-Distal,intron-Proximal4.215707.34858HepG2RBM15
chr91938019519380229-5'-UTR,intron-Distal,intron-Proximal3.1587123.10640HepG2BCLAF1
chr91938017919380187-5'-UTR,intron-Distal4.608549.68645HepG2AQR
chr91938022219380231-5'-UTR,intron-Distal,intron-Proximal4.3948951.94059HepG2LARP4
chr91938019319380207-5'-UTR,intron-Distal,intron-Proximal4.5713638.43623HepG2DDX3X
chr91938019419380231-5'-UTR,intron-Distal,intron-Proximal3.115467.59616HepG2DDX55
chr91938018819380227-5'-UTR,CDS,intron-Distal,intron-Proximal3.101433.77542K562SRSF7
chr91937957819379610-5'-UTR,CDS,intron-Distal3.1855228.21300HepG2LARP4
chr91938019119380233-5'-UTR,CDS,intron-Distal,intron-Proximal4.2530028.87196K562RPS3
chr91937959019379616-5'-UTR,CDS,intron-Distal3.0347727.06245K562PABPC4
chr91938016819380193-5'-UTR,CDS,intron-Distal3.2180019.50191HepG2PRPF8
chr91938011319380156-5'-UTR,intron-Distal5.248746.53582HepG2CDC40
chr91938019319380208-5'-UTR,intron-Distal,intron-Proximal3.2047877.09479K562DDX3X
chr91937631619376343-CDS,intron-Distal3.6472912.09027HepG2YBX3
chr91937941419379466-CDS,intron-Distal,intron-Proximal5.3302412.47477K562ZRANB2
chr91937661119376683-CDS,intron-Distal,intron-Proximal3.0264417.43759HepG2AQR
chr91937948419379486-CDS,intron-Distal,intron-Proximal3.9008612.46642HepG2TROVE2
chr91937845219378464-CDS,intron-Distal3.56221400.00000K562YBX3
chr91937636119376378-CDS,intron-Distal3.6432954.93122K562PABPC4
chr91937638319376387-CDS,intron-Distal3.98375400.00000HepG2BCLAF1
chr91937637819376382-CDS,intron-Distal3.8229452.45009K562PABPC4
chr91937652019376555-CDS,intron-Distal3.48308400.00000HepG2BCLAF1
chr91937943819379486-CDS,intron-Distal,intron-Proximal3.8888914.67295K562AQR
chr91937649119376497-CDS,intron-Distal,intron-Proximal3.0249020.60915HepG2GRWD1
chr91937636519376386-CDS,intron-Distal3.3409339.77232HepG2LARP4
chr91937649119376498-CDS,intron-Distal,intron-Proximal3.2721429.41355HepG2LARP4
chr91937649719376522-CDS,intron-Distal3.0537723.37377HepG2GRWD1
chr91937649019376523-CDS,intron-Distal,intron-Proximal3.1458318.82676HepG2ZNF800
chr91937631819376363-CDS,intron-Distal3.2732726.42964K562PUM1
chr91937630619376336-CDS,intron-Distal3.6995211.64572K562GRWD1
chr91937656919376576-CDS,intron-Distal3.40750400.00000K562YBX3
chr91937649819376520-CDS,intron-Distal4.45011400.00000HepG2BCLAF1
chr91937631219376341-CDS,intron-Distal3.1125045.24254HepG2BCLAF1
chr91937651519376538-CDS,intron-Distal4.2879131.77425K562ZNF800
chr91937633019376341-CDS,intron-Distal3.2951748.19894K562YBX3
chr91937846419378477-CDS,intron-Distal3.55384400.00000K562YBX3
chr91937649919376518-CDS,intron-Distal3.4267235.07069K562PABPC4
chr91937649519376523-CDS,intron-Distal3.345835.91589HepG2AGGF1
chr91937937119379414-CDS,intron-Distal,intron-Proximal6.2612911.66357K562ZRANB2
chr91937630919376344-CDS,intron-Distal3.863624.73828HepG2AGGF1
chr91937631119376330-CDS,intron-Distal3.3589949.31299K562YBX3
chr91937638319376386-CDS,intron-Distal3.2049010.58349K562LIN28B
chr91937629819376342-CDS,intron-Distal3.3211313.34334HepG2ZNF800
chr91937662619376650-CDS,intron-Distal,intron-Proximal3.1234031.19178K562ZNF800
chr91937649119376498-CDS,intron-Distal,intron-Proximal4.16050400.00000HepG2BCLAF1
chr91937634719376377-CDS,intron-Distal3.107034.94912HepG2AGGF1
chr91937847719378503-CDS,intron-Distal3.52504400.00000K562YBX3
chr91937637719376383-CDS,intron-Distal4.03077400.00000HepG2BCLAF1
chr91937632319376386-CDS,intron-Distal3.8915033.78039K562ZNF800
chr91937635719376364-CDS,intron-Distal3.3056753.60045HepG2BCLAF1
chr91937948419379493-CDS,intron-Distal,intron-Proximal3.9381743.05115K562TROVE2
chr91937870419378718-CDS,intron-Distal,intron-Proximal3.2877734.66136K562PUM2
chr91937871519378728-CDS,intron-Distal,intron-Proximal3.5052954.44580K562YBX3
chr91937631619376388-CDS,intron-Distal3.548957.92554HepG2RBM15
chr91937948819379523-CDS,intron-Distal3.0513522.90480HepG2LARP4
chr91937649119376499-CDS,intron-Distal,intron-Proximal3.7865050.72168K562PABPC4
chr91937649019376511-CDS,intron-Distal,intron-Proximal3.129155.17059HepG2TRA2A
chr91937629919376341-CDS,intron-Distal3.7413762.18901HepG2LARP4
chr91937638219376386-CDS,intron-Distal3.0286220.50624K562PUM1
chr91937871719378768-CDS,intron-Distal,intron-Proximal3.1265716.53939HepG2SUB1
chr91937657619376593-CDS,intron-Distal3.42980400.00000K562YBX3
chr91937651619376539-CDS,intron-Distal3.0423224.14407K562UCHL5
chr91937637719376381-CDS,intron-Distal3.294745.91589HepG2AGGF1
chr91937629719376344-CDS,intron-Distal3.2764220.10439HepG2DDX55
chr91937634119376365-CDS,intron-Distal3.4791340.73304HepG2LARP4
chr91937653819376626-CDS,intron-Distal3.40533400.00000K562ZNF800
chr91937636319376382-CDS,intron-Distal3.3030627.05954K562PUM1
chr91937636419376377-CDS,intron-Distal3.86106400.00000HepG2BCLAF1
chr91937649119376515-CDS,intron-Distal,intron-Proximal4.0700434.19021K562ZNF800
chr91937655519376561-CDS,intron-Distal3.2653579.66184HepG2BCLAF1
chr91937872819378745-CDS,intron-Distal,intron-Proximal3.4651164.27224K562YBX3
chr91937638119376387-CDS,intron-Distal3.274615.91589HepG2AGGF1
chr91937659319376597-CDS,intron-Distal3.29256400.00000K562YBX3
chr91937659719376622-CDS,intron-Distal3.04690400.00000K562YBX3
chr91937874519378771-CDS,intron-Distal,intron-Proximal3.4181759.82169K562YBX3
chr91937649019376495-CDS,intron-Distal,intron-Proximal3.347355.48208HepG2AGGF1
chr91937638219376386-CDS,intron-Distal3.8438852.13057K562PABPC4
chr91937948619379500-CDS,intron-Distal3.6535512.60921HepG2TROVE2
chr91937638919376449-intron-Distal,intron-Proximal5.1305122.36226HepG2EFTUD2
chr91937868419378706-intron-Distal,intron-Proximal3.8548011.12628K562AQR
chr91937639919376431-intron-Distal,intron-Proximal4.834665.33214K562PRPF8
chr91937639319376424-intron-Distal,intron-Proximal4.200716.86590K562SF3B4
chr91937814919378184-intron-Distal3.246654.13620K562KHSRP
chr91937639219376451-intron-Distal,intron-Proximal6.7615414.61799K562EFTUD2
chr91937643319376484-intron-Distal,intron-Proximal4.253249.09021HepG2PRPF8
chr91937862919378676-intron-Distal,intron-Proximal4.671074.68673K562RBM22
chr91937866319378684-intron-Distal,intron-Proximal5.0032911.65116K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RPS6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RPS6 is not available on ENCORE database.

  • 157 RBPs can affect the levels of RPS6.  








The Knockdown/knockout RNA-Seq assay for RPS6 is not available on ENCORE database.





157 RBPs can affect the gene expression of RPS6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RPS6ENSG00000137154.813683.8671021249.09960-0.6349011.5971010.53420HepG2ACO1
RPS6ENSG00000137154.825542.6766017738.160100.526007.037105.53790HepG2ADAR
RPS6ENSG00000137154.823883.4400059892.30420-1.3264016.8126015.61390HepG2AKAP1
RPS6ENSG00000137154.816457.0245023867.15120-0.536305.755904.28080HepG2AKAP8
RPS6ENSG00000137154.814648.1240021346.34570-0.543309.347008.03870HepG2AKAP8L
RPS6ENSG00000137154.825442.7619049557.63630-0.961909.003207.63980HepG2ASCC1
RPS6ENSG00000137154.825862.7844033797.71890-0.3860010.800809.59260HepG2AUH
RPS6ENSG00000137154.811657.1256017242.64550-0.564805.198604.00080HepG2BCLAF1
RPS6ENSG00000137154.813403.1522020808.43800-0.6346013.5251011.02580HepG2BUD13
RPS6ENSG00000137154.818078.5505021127.67410-0.224902.669801.91180HepG2CALR
RPS6ENSG00000137154.817013.2475021241.36910-0.320205.099004.24630HepG2CKAP4
RPS6ENSG00000137154.89493.1010022985.25630-1.2758016.5627014.75040HepG2CNOT7
RPS6ENSG00000137154.815764.8234012269.923300.361503.696102.91350HepG2CPSF6
RPS6ENSG00000137154.827545.7158018190.579300.5985018.9703016.49730HepG2YBX3
RPS6ENSG00000137154.828864.2200036194.68850-0.326504.810604.00670HepG2CELF1
RPS6ENSG00000137154.815584.6316023896.99570-0.6167011.5393010.26530HepG2DDX21
RPS6ENSG00000137154.829252.7895023389.049500.322604.379303.21990HepG2DDX24
RPS6ENSG00000137154.820979.0741057376.12410-1.4515019.6189018.11450HepG2DDX3X
RPS6ENSG00000137154.816639.7865021268.41740-0.354104.826403.09060HepG2DDX52
RPS6ENSG00000137154.812440.3750019509.82570-0.649207.747706.53160HepG2DDX55
RPS6ENSG00000137154.823526.5370049278.26440-1.0667012.7313011.52050HepG2DDX6
RPS6ENSG00000137154.813807.3862017227.13490-0.319203.454502.36540HepG2DHX30
RPS6ENSG00000137154.817125.4160025376.03600-0.567308.126306.63470HepG2EEF2
RPS6ENSG00000137154.815709.9057021154.90550-0.429304.793303.33600HepG2EFTUD2
RPS6ENSG00000137154.820276.2904047381.33670-1.2245015.5748014.23970HepG2EIF2S1
RPS6ENSG00000137154.821717.5137052366.27350-1.2698015.8539014.33700HepG2EIF4A3
RPS6ENSG00000137154.836128.2901050977.65730-0.496703.816003.01310HepG2EIF4B
RPS6ENSG00000137154.849758.5996038394.641400.3739010.170808.76180HepG2EIF4G1
RPS6ENSG00000137154.848074.8221036778.955200.386303.777302.83500HepG2EIF4G2
RPS6ENSG00000137154.824035.4952038805.38140-0.6911034.2379032.54710HepG2ETF1
RPS6ENSG00000137154.815268.8748018410.88230-0.270003.317102.02300HepG2FAM120A
RPS6ENSG00000137154.819139.9372028049.23570-0.551406.371905.25030HepG2FIP1L1
RPS6ENSG00000137154.828405.5607035338.06710-0.315003.696002.79550HepG2FUBP3
RPS6ENSG00000137154.824363.2377052822.28220-1.1164015.1558013.67400HepG2FXR1
RPS6ENSG00000137154.818523.7400049007.29970-1.4036019.2018017.52380HepG2G3BP1
RPS6ENSG00000137154.833872.7382052018.53140-0.618906.431805.06540HepG2G3BP2
RPS6ENSG00000137154.815205.9838018341.49240-0.270502.164601.37810HepG2GEMIN5
RPS6ENSG00000137154.814397.4096022242.70660-0.627508.578106.78380HepG2GNB2L1
RPS6ENSG00000137154.87792.3534013907.90180-0.8358010.557509.36400HepG2GPKOW
RPS6ENSG00000137154.816106.9912020284.91940-0.332704.533103.30800HepG2HDGF
RPS6ENSG00000137154.811637.7336020057.73170-0.7853018.4572016.83680HepG2HNRNPC
RPS6ENSG00000137154.817070.5546019925.09100-0.223104.162503.43100HepG2HNRNPU
RPS6ENSG00000137154.821700.6833049817.29930-1.1989014.4357013.02980HepG2IGF2BP2
RPS6ENSG00000137154.825728.6670046741.51690-0.861303.839702.67930HepG2IGF2BP3
RPS6ENSG00000137154.825907.4600020352.748800.3480012.0382010.63210HepG2ILF2
RPS6ENSG00000137154.835215.6702050103.10840-0.508702.912301.88000HepG2KHSRP
RPS6ENSG00000137154.817553.4830025964.71660-0.564804.840703.18020HepG2KRR1
RPS6ENSG00000137154.814904.3330030792.88660-1.0469016.2318014.25860HepG2LARP4
RPS6ENSG00000137154.818124.9864021791.23360-0.265802.556201.46630HepG2LARP7
RPS6ENSG00000137154.818742.2309022880.67120-0.287802.768601.55480HepG2LIN28B
RPS6ENSG00000137154.815370.5514052840.66480-1.7815028.2782026.34220HepG2MAGOH
RPS6ENSG00000137154.818518.7050053138.53720-1.5208022.4915020.83240HepG2MATR3
RPS6ENSG00000137154.813818.1200021559.62630-0.641804.015702.75920HepG2METAP2
RPS6ENSG00000137154.819767.3194022696.10330-0.199302.105001.39490HepG2MSI2
RPS6ENSG00000137154.810006.7722013538.59920-0.436102.767401.79970HepG2MTPAP
RPS6ENSG00000137154.813425.5586054391.97890-2.0184031.7390029.78140HepG2NCBP2
RPS6ENSG00000137154.814285.3311011769.485100.279402.018201.37460HepG2NSUN2
RPS6ENSG00000137154.823021.0309048447.55850-1.0735012.4237010.92260HepG2PABPC4
RPS6ENSG00000137154.825726.6480046556.36170-0.8557052.1112050.10580HepG2PCBP1
RPS6ENSG00000137154.816720.3725027163.41380-0.700106.098804.60180HepG2PCBP2
RPS6ENSG00000137154.811589.2114017035.50000-0.5558013.0746010.65630HepG2PKM
RPS6ENSG00000137154.819993.4647017771.515600.169901.957801.32940HepG2PPIL4
RPS6ENSG00000137154.823404.0632019078.480200.294703.347302.50300HepG2PRPF4
RPS6ENSG00000137154.811834.7124015051.44200-0.346902.929702.09940HepG2PRPF8
RPS6ENSG00000137154.814119.7808047372.14630-1.74630192.90490189.97050HepG2PTBP1
RPS6ENSG00000137154.816761.4841036836.04700-1.1360028.7632027.11590HepG2PUF60
RPS6ENSG00000137154.830086.3407039104.46150-0.3782010.657209.65370HepG2PUM1
RPS6ENSG00000137154.820752.4433039075.04570-0.9130033.8254031.68640HepG2PUM2
RPS6ENSG00000137154.810855.9585021643.13080-0.9954019.8920018.51110HepG2PUS1
RPS6ENSG00000137154.818133.6690051306.68020-1.50050101.2923098.45710HepG2QKI
RPS6ENSG00000137154.827539.0828032433.89340-0.236003.893403.30650HepG2RBM22
RPS6ENSG00000137154.818844.9429046563.55230-1.3050056.5552053.84190HepG2RBM25
RPS6ENSG00000137154.816937.3042021337.82460-0.333202.872401.79060HepG2RCC2
RPS6ENSG00000137154.816518.5093052721.22610-1.67430190.65900188.01660HepG2NELFE
RPS6ENSG00000137154.826002.5727049101.61340-0.9171060.1070058.04960HepG2RECQL
RPS6ENSG00000137154.821403.6279027087.97730-0.339803.632002.86760HepG2RPLP0
RPS6ENSG00000137154.816611.9812025749.52840-0.632304.945003.70050HepG2RPS10
RPS6ENSG00000137154.87635.1988020044.48080-1.3925060.9629058.76190HepG2RPS19
RPS6ENSG00000137154.811338.2734024234.08450-1.0958029.1629026.82420HepG2RPS2
RPS6ENSG00000137154.814322.7965023077.16100-0.688206.851305.60210HepG2RPS3A
RPS6ENSG00000137154.817785.1780024737.71890-0.476005.979704.39020HepG2RPS5
RPS6ENSG00000137154.811516.1576014889.10830-0.370602.930802.12440HepG2RRP9
RPS6ENSG00000137154.820307.8362028518.72780-0.489903.201401.55810HepG2RTF1
RPS6ENSG00000137154.824729.3834017743.926600.478808.632907.58890HepG2SAFB2
RPS6ENSG00000137154.831008.8954021731.263400.512804.548002.87650HepG2SART3
RPS6ENSG00000137154.813178.0811020117.80610-0.610309.102207.42210HepG2SERBP1
RPS6ENSG00000137154.810755.4213013136.72560-0.288502.793502.08340HepG2SF3B1
RPS6ENSG00000137154.823747.1437049321.76090-1.0545081.3594079.02960HepG2SF3B4
RPS6ENSG00000137154.816990.0198020691.99860-0.284407.868106.87090HepG2SMN1
RPS6ENSG00000137154.815033.8230027645.96250-0.878902.875001.53570HepG2SNRNP200
RPS6ENSG00000137154.827953.7900036632.49190-0.3901014.1579013.25870HepG2SRFBP1
RPS6ENSG00000137154.816766.4002051480.73330-1.61850215.26870212.85990HepG2SRSF1
RPS6ENSG00000137154.811055.4323014136.82370-0.354702.518801.56720HepG2SRSF3
RPS6ENSG00000137154.819695.3417036371.87400-0.8850034.5697032.70900HepG2SRSF5
RPS6ENSG00000137154.819407.9936024706.26370-0.348208.412007.31260HepG2SRSF7
RPS6ENSG00000137154.825961.3128041881.88210-0.6900038.1088036.51500HepG2SRSF9
RPS6ENSG00000137154.818535.3183031804.98250-0.7790046.5837045.10690HepG2SSB
RPS6ENSG00000137154.833180.5788025892.876700.357702.801301.51280HepG2SSRP1
RPS6ENSG00000137154.818210.5099024496.93730-0.427802.584401.42550HepG2SUB1
RPS6ENSG00000137154.827293.1609041363.43430-0.5998024.4711022.91900HepG2SUCLG1
RPS6ENSG00000137154.837501.6989026210.203200.516704.282202.62020HepG2SUGP2
RPS6ENSG00000137154.815236.3778018935.80190-0.313604.313503.15220HepG2SUPT6H
RPS6ENSG00000137154.810238.2758019422.07530-0.9237015.6913014.31270HepG2SUPV3L1
RPS6ENSG00000137154.836574.4681046271.48390-0.339306.015005.24070HepG2TAF15
RPS6ENSG00000137154.825606.9506042518.68250-0.7316019.5141017.37220HepG2TIA1
RPS6ENSG00000137154.88427.4196019359.36970-1.1999050.8378049.19230HepG2TIAL1
RPS6ENSG00000137154.818441.3716026320.90990-0.513303.776402.07230HepG2TRA2A
RPS6ENSG00000137154.822677.3459019534.123800.215203.380702.77120HepG2TRIM56
RPS6ENSG00000137154.818346.0222035989.49720-0.9721028.8218025.97200HepG2TUFM
RPS6ENSG00000137154.816241.7082023991.38550-0.562808.999207.85960HepG2U2AF1
RPS6ENSG00000137154.813233.4583032151.83930-1.280705.170803.79620HepG2U2AF2
RPS6ENSG00000137154.822349.0391038095.78850-0.7694012.0039010.21760HepG2UBE2L3
RPS6ENSG00000137154.815046.2393011473.453000.391003.876902.97970HepG2UCHL5
RPS6ENSG00000137154.816201.9402024050.67670-0.5699026.0895024.39340HepG2UPF1
RPS6ENSG00000137154.819255.5049024720.69360-0.360408.330806.62680HepG2UTP18
RPS6ENSG00000137154.827154.7730019118.892800.506106.577105.47580HepG2XRN2
RPS6ENSG00000137154.813219.3533018827.52180-0.5102024.6977023.05100HepG2ZC3H8
RPS6ENSG00000137154.818917.2223026451.13320-0.4836026.5343025.27960HepG2ZNF622
RPS6ENSG00000137154.818706.9138024618.39400-0.396205.440503.72380K562AARS
RPS6ENSG00000137154.834156.1398028881.508500.241905.167004.43170K562AGGF1
RPS6ENSG00000137154.842060.4293030052.561600.484907.526106.40270K562AKAP8L
RPS6ENSG00000137154.842480.1528031532.452500.429909.814707.96400K562ATP5C1
RPS6ENSG00000137154.820335.5247023904.68070-0.233303.470001.96210K562BCCIP
RPS6ENSG00000137154.818506.0640023098.70860-0.319808.171506.49220K562BCLAF1
RPS6ENSG00000137154.824132.9069037385.40620-0.631503.519602.29660K562CNOT7
RPS6ENSG00000137154.813654.6868017523.80760-0.359907.142205.32160K562CSTF2
RPS6ENSG00000137154.820074.8607024158.81270-0.267203.155901.85650K562DDX21
RPS6ENSG00000137154.826680.7882031744.84410-0.250704.547203.73890K562DDX47
RPS6ENSG00000137154.815696.1241021318.43250-0.441704.362402.25870K562DDX51
RPS6ENSG00000137154.841487.6579032338.440300.359307.751506.15260K562DKC1
RPS6ENSG00000137154.813573.1040019739.90330-0.540407.418705.86040K562EFTUD2
RPS6ENSG00000137154.821792.0319019071.188800.192302.213301.49580K562EIF3G
RPS6ENSG00000137154.815554.8989019231.37890-0.306103.202002.32280K562EIF4A3
RPS6ENSG00000137154.829350.9115023332.729100.331003.521002.55480K562FIP1L1
RPS6ENSG00000137154.813798.7758017402.79160-0.334803.294902.35690K562FMR1
RPS6ENSG00000137154.816488.6974019999.80230-0.278504.967404.19080K562FXR1
RPS6ENSG00000137154.817965.4997024644.30480-0.456006.977105.21800K562GLRX3
RPS6ENSG00000137154.812846.5517016330.21870-0.346204.111203.14790K562GPKOW
RPS6ENSG00000137154.815473.2603026939.27200-0.7999022.0799020.47430K562HNRNPC
RPS6ENSG00000137154.818779.7435024056.00900-0.357204.534103.02790K562HNRNPF
RPS6ENSG00000137154.815408.2324019649.61040-0.350803.946801.67330K562HNRNPH1
RPS6ENSG00000137154.829036.9798019191.778900.597307.436905.79270K562HNRNPM
RPS6ENSG00000137154.825705.6512029615.67300-0.204302.547701.68900K562HNRNPU
RPS6ENSG00000137154.853690.7305031633.839900.7631015.5882013.78580K562HSPD1
RPS6ENSG00000137154.820851.3464025950.15300-0.315602.239001.34460K562IGF2BP2
RPS6ENSG00000137154.842152.8636031893.128900.402306.425805.04670K562KIF1C
RPS6ENSG00000137154.820584.1905026084.84920-0.341704.000202.27290K562LARP7
RPS6ENSG00000137154.821385.2751027320.86380-0.353403.158601.57410K562LIN28B
RPS6ENSG00000137154.821110.9583027274.26680-0.369504.838903.71900K562MAGOH
RPS6ENSG00000137154.836083.0264030529.694000.241002.423201.43960K562MAK16
RPS6ENSG00000137154.820861.7292027219.19050-0.383805.496704.13360K562MATR3
RPS6ENSG00000137154.842502.0640035728.381100.250402.385101.54980K562MBNL1
RPS6ENSG00000137154.812621.6972015940.08690-0.336804.191103.09870K562METAP2
RPS6ENSG00000137154.817836.4003025910.15990-0.5387023.2783021.27420K562MTPAP
RPS6ENSG00000137154.834593.5035025043.020900.466003.849902.76260K562NAA15
RPS6ENSG00000137154.823024.2471028789.14800-0.3224016.7777015.15150K562NSUN2
RPS6ENSG00000137154.823730.4736035916.29370-0.597903.305501.93490K562PABPC1
RPS6ENSG00000137154.813696.2005023751.07820-0.7942011.205909.54110K562PCBP3
RPS6ENSG00000137154.810399.8130018218.55550-0.8089016.9577015.06400K562POLR2G
RPS6ENSG00000137154.835288.1525026487.661000.413804.851603.71950K562PPIG
RPS6ENSG00000137154.818873.5021024153.65830-0.355904.403403.22300K562PSIP1
RPS6ENSG00000137154.818873.0363026498.53310-0.489608.812007.66910K562PTBP1
RPS6ENSG00000137154.838470.9100049452.10040-0.362304.836103.76060K562PUF60
RPS6ENSG00000137154.846115.0954051537.41970-0.160402.204301.34540K562PUM2
RPS6ENSG00000137154.844485.4898029803.591100.577709.487908.53170K562PUS1
RPS6ENSG00000137154.837832.5487029039.361400.381507.847506.87950K562RBM15
RPS6ENSG00000137154.820710.0029025409.84470-0.295102.853101.99760K562RBM22
RPS6ENSG00000137154.828158.1149021900.566000.362504.804502.97190K562RBM25
RPS6ENSG00000137154.819982.3308024769.04970-0.309802.680501.33490K562RBM34
RPS6ENSG00000137154.813980.1610022036.01770-0.6565016.0757013.72130K562RCC2
RPS6ENSG00000137154.819882.5278026739.58280-0.427504.761503.28350K562NELFE
RPS6ENSG00000137154.814211.3040019567.56890-0.461404.153303.15120K562RPS19
RPS6ENSG00000137154.822550.9582033335.64520-0.563903.022901.36330K562RPS3A
RPS6ENSG00000137154.812154.1211017108.29380-0.493306.370504.76870K562RPS3
RPS6ENSG00000137154.810626.8921016231.07400-0.611007.872506.08510K562SAFB
RPS6ENSG00000137154.820204.7568034050.75620-0.753004.898502.76060K562SBDS
RPS6ENSG00000137154.811794.3250015530.36940-0.397003.465102.37280K562SF3B1
RPS6ENSG00000137154.810950.6465014759.63970-0.430605.008303.27800K562SLBP
RPS6ENSG00000137154.814869.9838020889.66610-0.490404.552303.14670K562SRFBP1
RPS6ENSG00000137154.814823.1510019180.52500-0.371803.895501.91840K562SRP68
RPS6ENSG00000137154.820533.8627029103.08980-0.5032026.2916023.92740K562SRPK2
RPS6ENSG00000137154.817268.3295025977.20890-0.5891012.9407011.41220K562SRSF1
RPS6ENSG00000137154.813016.2880016517.19720-0.343704.133602.81110K562SRSF4
RPS6ENSG00000137154.815521.5271020737.90770-0.418005.975203.68980K562SRSF9
RPS6ENSG00000137154.821866.1878027999.84780-0.356703.274301.88610K562STAU1
RPS6ENSG00000137154.819684.7233033324.06750-0.759504.135802.12800K562STIP1
RPS6ENSG00000137154.89317.9770018600.18020-0.9972018.8614016.23890K562SUPV3L1
RPS6ENSG00000137154.821971.7089025360.56620-0.206902.075101.37340K562TIA1
RPS6ENSG00000137154.813988.0148023231.90880-0.7319011.739309.69320K562TIAL1
RPS6ENSG00000137154.816446.9274024679.70930-0.585509.607307.57610K562TRIM56
RPS6ENSG00000137154.812004.1561017267.32720-0.524505.686203.11510K562TRNAU1AP
RPS6ENSG00000137154.814014.1138019685.22280-0.490205.916704.36940K562UCHL5
RPS6ENSG00000137154.825314.9536030525.69380-0.270006.269305.23960K562UPF1
RPS6ENSG00000137154.821852.9801026119.95390-0.257302.855801.96500K562WDR3
RPS6ENSG00000137154.832827.1112040568.46430-0.305503.550002.07660K562WRN
RPS6ENSG00000137154.814383.7851020043.83330-0.478705.573603.63520K562XRN2
RPS6ENSG00000137154.828035.1772038568.03020-0.460206.618105.19410K562ZC3H8
RPS6ENSG00000137154.814679.7737019431.54590-0.404605.140402.71520K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RPS6 is not available on ENCORE database.





13 RBPs can affect the splicing of RPS6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSRPS6ENSG00000137154.8chr9-1937937519379616193794601937961619378705193789160.482000.003290.05097longerK562AQR
A5SSRPS6ENSG00000137154.8chr9-193783651937856319378397193785631937649119376587-0.304000.002670.04300shorterK562AQR
A5SSRPS6ENSG00000137154.8chr9-1937948419379616193794981937961619378771193788000.844000.000010.00576longerK562DROSHA
MXERPS6ENSG00000137154.8chr9-19378365193785121937870519378916193764911937664919379484193802040.298000.000000.000001includedK562HNRNPL
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.305000.000000.000001includedK562HNRNPL
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.353000.000000.000001includedHepG2U2AF1
MXERPS6ENSG00000137154.8chr9-1937870519378800193788221937891619378365193785121937948419379616-0.083000.000650.074592includedHepG2FUS
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.295000.000000.000001includedHepG2UTP18
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.079000.000830.044491includedHepG2SRSF9
MXERPS6ENSG00000137154.8chr9-1937870519378800193788221937891619378365193785121937948419379616-0.083000.000810.022802includedK562TARDBP
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.116000.004190.073151includedHepG2DDX55
MXERPS6ENSG00000137154.8chr9-19378705193788001937949819379616193783651937851219380187193802340.120000.000000.000101includedK562TAF15
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.234000.000000.000001includedHepG2SRSF7
MXERPS6ENSG00000137154.8chr9-1937836519378512193787051937891619376491193766491937948419379616-0.072000.002870.050502includedK562PRPF8
MXERPS6ENSG00000137154.8chr9-19378705193788001937882219378916193783651937851219379484193796160.316000.000000.000001includedK562FMR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RPS6 is not avaliable on ENCORE database.