MAGT1

General Information

Gene Name       : MAGT1
Gene ID             : ENSG00000102158.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MAGT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MAGT1ENSG00000102158.1928.6132.7530.68ENCSR000AEF
HepG2MAGT1ENSG00000102158.1931.1039.2835.19ENCSR985KAT
K562MAGT1ENSG00000102158.1918.0319.3418.69ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MAGT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MAGT1 RNA is bound by 16 proteins.  







eCLIP assay for MAGT1 is not avaliable on ENCORE database.





16 proteins are bound to MAGT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX7708269777082760-3'-UTR,intron-Distal4.0938013.58985K562UPF1
chrX7708269277082750-3'-UTR,intron-Distal5.564709.15073K562FAM120A
chrX7708321777083296-3'-UTR,intron-Distal3.4869515.47906K562UPF1
chrX7708414177084285-3'-UTR,intron-Distal4.091744.00727K562IGF2BP2
chrX7708238477082448-3'-UTR,intron-Distal3.684775.47244HepG2LARP4
chrX7708319977083277-3'-UTR,intron-Distal3.992357.78496HepG2FAM120A
chrX7708381877083890-3'-UTR,intron-Distal6.4252856.76438HepG2UPF1
chrX7708385377083911-3'-UTR,intron-Distal5.7162922.94645K562UPF1
chrX7708420477084251-3'-UTR,intron-Distal3.248573.37207K562FAM120A
chrX7708237777082452-3'-UTR,intron-Distal5.9486413.76890K562UPF1
chrX7708359577083645-3'-UTR,intron-Distal3.145037.47822K562UPF1
chrX7708230177082342-3'-UTR,intron-Distal3.852865.46639K562FAM120A
chrX7708390477083967-3'-UTR,intron-Distal3.372673.49637K562AKAP1
chrX7708378277083852-3'-UTR,intron-Distal5.7809222.58885K562UPF1
chrX7708401077084064-3'-UTR,intron-Distal3.0710212.05843K562UPF1
chrX7708282877082886-3'-UTR,intron-Distal4.643997.23560K562PUM2
chrX7708235177082397-3'-UTR,intron-Distal5.6041716.54688K562PABPC4
chrX7708395577084003-3'-UTR,intron-Distal5.1528814.07248K562UPF1
chrX7708391177083955-3'-UTR,intron-Distal5.2528913.02031K562UPF1
chrX7708389077083913-3'-UTR,intron-Distal6.1797949.58859HepG2UPF1
chrX7708368977083718-3'-UTR,intron-Distal4.917729.97858HepG2UPF1
chrX7708391377083983-3'-UTR,intron-Distal5.8094236.30625HepG2UPF1
chrX7708226977082335-3'-UTR,intron-Distal4.108733.66655K562YBX3
chrX7708371877083743-3'-UTR,intron-Distal4.767119.72910HepG2UPF1
chrX7708320977083294-3'-UTR,intron-Distal3.114109.15563K562FAM120A
chrX7708350477083556-3'-UTR,intron-Distal7.6415834.10504HepG2UPF1
chrX7708229177082458-3'-UTR,intron-Distal4.182916.86123K562DDX6
chrX7708235477082445-3'-UTR,intron-Distal4.025653.84732HepG2TIA1
chrX7708239777082441-3'-UTR,intron-Distal3.908017.28182K562PABPC4
chrX7708355677083586-3'-UTR,intron-Distal5.8854535.80746HepG2UPF1
chrX7708336977083457-3'-UTR,intron-Distal4.165413.23259HepG2LIN28B
chrX7708236777082445-3'-UTR,intron-Distal3.024934.75596HepG2DDX55
chrX7708238677082439-3'-UTR,intron-Distal3.469324.51776K562FAM120A
chrX7708231877082351-3'-UTR,intron-Distal4.963538.44915K562PABPC4
chrX7708226177082331-3'-UTR,intron-Distal4.099793.23259HepG2LIN28B
chrX7708398877084070-3'-UTR,intron-Distal5.5305050.26743HepG2UPF1
chrX7708358677083653-3'-UTR,intron-Distal5.7611146.76914HepG2UPF1
chrX7708228677082384-3'-UTR,intron-Distal3.122016.17266HepG2LARP4
chrX7715081177150924-5'-UTR,CDS,intron-Distal,intron-Proximal3.075826.79863HepG2DDX3X
chrX7715084877150916-5'-UTR,CDS,intron-Distal5.940766.70747K562RPS3
chrX7715081577150927-5'-UTR,CDS,intron-Distal,intron-Proximal4.5340318.53538HepG2RPS3
chrX7712632477126425-CDS,intron-Distal,intron-Proximal5.0322714.43845K562SND1
chrX7711100277111088-CDS,intron-Distal,intron-Proximal4.254367.95584K562SND1
chrX7713092277130968-CDS,intron-Distal,intron-Proximal3.343437.51320K562SND1
chrX7711292177112992-CDS,intron-Distal4.7823210.49650K562SND1
chrX7711294377112977-CDS,intron-Distal4.291224.55355HepG2SND1
chrX7711222977112338-CDS,intron-Distal,intron-Proximal3.191534.34695HepG2BCLAF1
chrX7712635577126423-CDS,intron-Distal,intron-Proximal5.320678.23251HepG2SND1
chrX7708630577086385-CDS,intron-Distal4.498054.13314K562SND1
chrX7711102777111087-CDS,intron-Distal4.403635.29097HepG2LIN28B
chrX7711222977112280-CDS,intron-Distal,intron-Proximal4.528754.57227K562SND1
chrX7709675177096817-CDS,intron-Distal4.682165.02285K562SND1
chrX7710941277109461-CDS,intron-Distal4.063383.77218HepG2SND1
chrX7713092477131017-CDS,intron-Distal,intron-Proximal3.183356.23251HepG2SND1
chrX7712630477126324-CDS,intron-Distal,intron-Proximal4.403974.89631K562SND1
chrX7711228077112359-CDS,intron-Distal4.101936.47873K562SND1
chrX7711285277112943-CDS,intron-Distal,intron-Proximal6.5782520.83839HepG2SND1
chrX7711286177112921-CDS,intron-Distal3.139956.08510K562SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MAGT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MAGT1 is not available on ENCORE database.

  • 75 RBPs can affect the levels of MAGT1.  








The Knockdown/knockout RNA-Seq assay for MAGT1 is not available on ENCORE database.





75 RBPs can affect the gene expression of MAGT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MAGT1ENSG00000102158.151444.236701685.90960-0.223202.518301.93330HepG2ACO1
MAGT1ENSG00000102158.152509.561702099.260900.257502.366801.72310HepG2AUH
MAGT1ENSG00000102158.151946.133801544.188000.333702.571301.70350HepG2BCLAF1
MAGT1ENSG00000102158.15985.211801248.39100-0.341602.968801.69560HepG2BUD13
MAGT1ENSG00000102158.152321.137301753.505200.404504.996003.99590HepG2CALR
MAGT1ENSG00000102158.153464.801702450.686700.499505.431404.36850HepG2CIRBP
MAGT1ENSG00000102158.151402.529901685.50960-0.265203.616402.87370HepG2CKAP4
MAGT1ENSG00000102158.15909.498001249.54180-0.458302.997702.28570HepG2CPSF6
MAGT1ENSG00000102158.151604.381602232.19560-0.476408.660907.64400HepG2CELF1
MAGT1ENSG00000102158.152112.946901563.703400.434204.850803.62860HepG2DDX24
MAGT1ENSG00000102158.15818.436301055.99370-0.367703.014301.59980HepG2DDX52
MAGT1ENSG00000102158.152007.629902565.06240-0.353502.304401.73590HepG2DDX6
MAGT1ENSG00000102158.151241.733001484.72800-0.257802.479901.81000HepG2DNAJC21
MAGT1ENSG00000102158.151198.081201471.50980-0.296604.222003.44840HepG2DNAJC2
MAGT1ENSG00000102158.151353.961101022.790000.404603.092402.14130HepG2EIF3D
MAGT1ENSG00000102158.153775.665602725.617600.470004.006803.24110HepG2EIF4A3
MAGT1ENSG00000102158.151677.853802367.91720-0.4970010.603209.16920HepG2EIF4G1
MAGT1ENSG00000102158.151829.471001454.174500.331102.589601.35730HepG2FKBP4
MAGT1ENSG00000102158.152102.334702749.52160-0.387203.153502.41550HepG2FXR1
MAGT1ENSG00000102158.152692.381202205.862100.287403.939902.85620HepG2HNRNPA2B1
MAGT1ENSG00000102158.152289.792301351.841600.760209.050007.98510HepG2HNRNPLL
MAGT1ENSG00000102158.151108.765001656.24970-0.5790012.1240010.92780HepG2HNRNPU
MAGT1ENSG00000102158.151330.172901691.81040-0.347005.981804.94310HepG2ILF2
MAGT1ENSG00000102158.15964.222301541.11190-0.6765017.8897015.58810HepG2KIF1C
MAGT1ENSG00000102158.151806.697101361.632800.407903.875002.92130HepG2MSI2
MAGT1ENSG00000102158.151656.705502831.17820-0.773109.958608.80080HepG2NCBP2
MAGT1ENSG00000102158.151674.626502380.09480-0.507208.513007.20080HepG2NOL12
MAGT1ENSG00000102158.151754.551701198.586700.549706.035904.95590HepG2NSUN2
MAGT1ENSG00000102158.151186.559001639.44830-0.466407.775906.47150HepG2PARN
MAGT1ENSG00000102158.151972.484102495.19340-0.339105.665204.84520HepG2PCBP1
MAGT1ENSG00000102158.151769.940901120.598100.6593014.8885013.31910HepG2PRPF4
MAGT1ENSG00000102158.151584.981002538.87790-0.6797019.1483017.95280HepG2PTBP1
MAGT1ENSG00000102158.154098.996002410.030100.7661018.9370017.27830HepG2PUM2
MAGT1ENSG00000102158.151388.154401717.20340-0.306904.324703.58630HepG2PUS1
MAGT1ENSG00000102158.151820.253702749.82660-0.5952011.9619010.79640HepG2QKI
MAGT1ENSG00000102158.151054.014801894.63190-0.846005.894604.89270HepG2RAVER1
MAGT1ENSG00000102158.151356.054601839.83310-0.440202.530801.70750HepG2RBM15
MAGT1ENSG00000102158.153243.903402495.584300.378303.908003.11750HepG2RBM25
MAGT1ENSG00000102158.151702.493502825.58940-0.7309022.0380020.79570HepG2NELFE
MAGT1ENSG00000102158.151872.576802631.53990-0.4909010.937909.83590HepG2RECQL
MAGT1ENSG00000102158.151197.419301759.99350-0.555605.465204.36250HepG2RPS2
MAGT1ENSG00000102158.151354.496901796.46720-0.407402.972101.85800HepG2RPS5
MAGT1ENSG00000102158.151544.893602643.43350-0.7749024.5144023.05250HepG2SF3B4
MAGT1ENSG00000102158.152590.520602178.399700.249903.899703.08880HepG2SLBP
MAGT1ENSG00000102158.151252.134201720.11680-0.458109.901408.80370HepG2SMN1
MAGT1ENSG00000102158.151031.470601931.17130-0.904809.474807.64870HepG2SMNDC1
MAGT1ENSG00000102158.151267.999702275.26900-0.8435018.4813017.48950HepG2SRFBP1
MAGT1ENSG00000102158.153537.700702759.117600.358503.841903.30760HepG2SRSF1
MAGT1ENSG00000102158.151269.390102243.20490-0.8214025.3396023.71500HepG2SRSF5
MAGT1ENSG00000102158.151830.707602244.64210-0.294104.574403.89790HepG2SRSF9
MAGT1ENSG00000102158.152567.984701975.555400.378306.784606.04940HepG2SSB
MAGT1ENSG00000102158.151959.312702551.17860-0.380808.160407.18790HepG2SUCLG1
MAGT1ENSG00000102158.151604.088901136.036000.497605.670204.34700HepG2SUPT6H
MAGT1ENSG00000102158.152119.167002479.85080-0.226802.506601.96940HepG2TAF15
MAGT1ENSG00000102158.15377.060601317.33720-1.8048022.7836021.08750HepG2TARDBP
MAGT1ENSG00000102158.151052.692501609.49000-0.612509.962509.11700HepG2TIAL1
MAGT1ENSG00000102158.151316.104701902.21440-0.531403.519501.87280HepG2TRA2A
MAGT1ENSG00000102158.15831.254701623.73390-0.9660029.6769028.07300HepG2TRIM56
MAGT1ENSG00000102158.15326.77810812.72810-1.3145016.6409013.60190HepG2TROVE2
MAGT1ENSG00000102158.151843.362402349.33980-0.349902.530301.73160HepG2UBE2L3
MAGT1ENSG00000102158.152418.049701823.818500.406808.114007.02280HepG2UPF1
MAGT1ENSG00000102158.151187.529201760.83340-0.5683011.9990010.88770HepG2UTP3
MAGT1ENSG00000102158.151523.289801105.863700.461908.660507.58220HepG2ZC3H8
MAGT1ENSG00000102158.152778.297102005.858800.4699013.4298012.45150HepG2ZNF622
MAGT1ENSG00000102158.15994.41920768.268300.372102.478101.65540K562BOP1
MAGT1ENSG00000102158.15956.051101258.83000-0.396904.924604.09050K562DDX47
MAGT1ENSG00000102158.151852.653301540.447600.266102.895801.99820K562DKC1
MAGT1ENSG00000102158.15673.97160866.85420-0.363103.040201.67110K562EWSR1
MAGT1ENSG00000102158.151156.432501488.02640-0.363703.270802.45120K562GRSF1
MAGT1ENSG00000102158.151504.887501841.91810-0.291602.879001.41180K562PNPT1
MAGT1ENSG00000102158.15945.83670762.684700.310402.342001.60550K562POLR2G
MAGT1ENSG00000102158.15885.588501353.70570-0.612208.563007.43640K562PTBP1
MAGT1ENSG00000102158.152789.818401955.823300.512306.311305.08090K562PUF60
MAGT1ENSG00000102158.15828.412501298.19410-0.648107.904806.38970K562RBM22
MAGT1ENSG00000102158.15743.760701006.46990-0.436405.804404.51450K562SRPK2
MAGT1ENSG00000102158.15955.82120765.022000.321102.157701.43200K562SYNCRIP
MAGT1ENSG00000102158.151050.305801343.13020-0.354802.633901.94200K562TARDBP
MAGT1ENSG00000102158.15764.738401149.27120-0.587709.952607.52520K562TROVE2
MAGT1ENSG00000102158.15518.881301254.40100-1.2735019.8593017.15120K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MAGT1 is not available on ENCORE database.





1 RBPs can affect the splicing of MAGT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEMAGT1ENSG00000102158.15chrX-77109397771094617711099777111087770967427709681777112229771123700.140000.017470.083861includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MAGT1 is not avaliable on ENCORE database.