RP11-313J2.1

General Information

Gene Name : RP11-313J2.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-313J2.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-313J2.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-313J2.1 RNA is bound by 4 proteins.

eCLIP assay for RP11-313J2.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-313J2.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	42833123	42833151	-	intron-Distal,intron-Proximal	3.98340	3.43980	K562	ZNF622
chr10	42832707	42832784	-	intron-Distal	4.17372	3.84033	K562	SAFB2
chr10	42833309	42833337	-	intron-Distal	4.20579	4.10264	K562	ZNF622
chr10	42832808	42832872	-	intron-Distal	3.43409	4.09989	K562	UCHL5
chr10	42832822	42832868	-	intron-Distal	4.08634	3.48187	K562	RBM15
chr10	42832609	42832691	-	intron-Distal	4.08704	5.14848	K562	ZNF622
chr10	42832614	42832681	-	intron-Distal	3.90984	7.45042	K562	UCHL5
chr10	42833074	42833118	-	intron-Distal	4.21750	3.81597	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-313J2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-313J2.1 is not available on ENCORE database.
83 RBPs can affect the levels of RP11-313J2.1.

The Knockdown/knockout RNA-Seq assay for RP11-313J2.1 is not available on ENCORE database.

83 RBPs can affect the gene expression of RP11-313J2.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-313J2.1	ENSG00000215146.4	408.59150	1048.27890	-1.35930	19.06300	17.69610	K562	AGGF1
RP11-313J2.1	ENSG00000215146.4	705.06730	1151.76530	-0.70800	6.34820	4.70440	K562	AKAP8
RP11-313J2.1	ENSG00000215146.4	621.76320	1090.74850	-0.81090	4.99960	4.11000	K562	AKAP8L
RP11-313J2.1	ENSG00000215146.4	1177.94610	1892.33690	-0.68390	9.16490	8.19760	K562	AQR
RP11-313J2.1	ENSG00000215146.4	823.93810	1065.72900	-0.37120	2.53700	1.70240	K562	BOP1
RP11-313J2.1	ENSG00000215146.4	926.45240	1260.49060	-0.44420	3.29040	1.71080	K562	BUD13
RP11-313J2.1	ENSG00000215146.4	250.45970	388.80100	-0.63450	2.95080	1.85540	K562	CCAR1
RP11-313J2.1	ENSG00000215146.4	1439.21910	2075.86270	-0.52840	10.14250	8.03670	K562	CPEB4
RP11-313J2.1	ENSG00000215146.4	795.98350	1133.13760	-0.50950	5.64020	4.52880	K562	CPSF6
RP11-313J2.1	ENSG00000215146.4	655.04410	841.47410	-0.36130	3.47260	1.97450	K562	DDX27
RP11-313J2.1	ENSG00000215146.4	441.10150	719.56330	-0.70600	8.07520	6.21170	K562	DDX3X
RP11-313J2.1	ENSG00000215146.4	933.02090	2148.02150	-1.20300	47.49290	45.15100	K562	DDX47
RP11-313J2.1	ENSG00000215146.4	573.90710	832.80660	-0.53720	3.20340	1.81600	K562	EEF2
RP11-313J2.1	ENSG00000215146.4	624.66470	804.69600	-0.36540	2.20990	1.39430	K562	EFTUD2
RP11-313J2.1	ENSG00000215146.4	512.40510	1200.02830	-1.22770	32.83870	30.88460	K562	EIF2S2
RP11-313J2.1	ENSG00000215146.4	198.88370	395.49870	-0.99170	3.38910	2.26650	K562	EIF3A
RP11-313J2.1	ENSG00000215146.4	681.27160	1036.87880	-0.60590	8.15520	6.79700	K562	EIF3G
RP11-313J2.1	ENSG00000215146.4	501.16400	676.97630	-0.43380	3.96090	2.53470	K562	EIF4B
RP11-313J2.1	ENSG00000215146.4	1676.18880	2516.31180	-0.58610	11.23710	9.40140	K562	EIF4G2
RP11-313J2.1	ENSG00000215146.4	429.62740	656.19090	-0.61100	6.52470	4.36060	K562	EWSR1
RP11-313J2.1	ENSG00000215146.4	710.47620	1300.84590	-0.87260	13.00760	11.03070	K562	FIP1L1
RP11-313J2.1	ENSG00000215146.4	634.68680	1153.01450	-0.86130	11.47490	9.66640	K562	FMR1
RP11-313J2.1	ENSG00000215146.4	558.02630	977.31580	-0.80850	8.97000	7.23320	K562	FTO
RP11-313J2.1	ENSG00000215146.4	502.15010	709.19900	-0.49810	4.99160	2.41720	K562	FUBP3
RP11-313J2.1	ENSG00000215146.4	1217.02870	809.53910	0.58810	2.19850	1.57890	K562	G3BP2
RP11-313J2.1	ENSG00000215146.4	685.46990	1081.83700	-0.65830	7.65950	6.33550	K562	GPKOW
RP11-313J2.1	ENSG00000215146.4	996.41140	1599.25480	-0.68260	8.95200	7.57000	K562	GRSF1
RP11-313J2.1	ENSG00000215146.4	1327.40730	984.07140	0.43170	4.31180	2.97310	K562	HNRNPA1
RP11-313J2.1	ENSG00000215146.4	539.71810	831.31510	-0.62320	6.27650	5.41260	K562	HNRNPC
RP11-313J2.1	ENSG00000215146.4	518.76110	742.27210	-0.51690	4.38010	2.90360	K562	HNRNPF
RP11-313J2.1	ENSG00000215146.4	1236.97800	1941.22350	-0.65010	10.03740	7.91540	K562	HNRNPL
RP11-313J2.1	ENSG00000215146.4	618.77620	1070.00320	-0.79010	8.09960	6.36610	K562	HNRNPM
RP11-313J2.1	ENSG00000215146.4	640.01070	1341.61980	-1.06780	4.96660	2.03880	K562	HNRNPUL1
RP11-313J2.1	ENSG00000215146.4	873.21570	1763.61640	-1.01410	18.39650	16.48430	K562	HSPD1
RP11-313J2.1	ENSG00000215146.4	492.31740	1035.57490	-1.07280	10.15420	7.76210	K562	IGF2BP2
RP11-313J2.1	ENSG00000215146.4	639.74090	1053.58890	-0.71980	5.46040	3.68570	K562	IGF2BP3
RP11-313J2.1	ENSG00000215146.4	683.74020	1157.67300	-0.75970	8.82520	7.13400	K562	KIF1C
RP11-313J2.1	ENSG00000215146.4	526.92230	804.74380	-0.61090	5.80840	3.68910	K562	LARP7
RP11-313J2.1	ENSG00000215146.4	550.57210	741.05630	-0.42870	3.06340	1.43340	K562	LSM11
RP11-313J2.1	ENSG00000215146.4	625.66430	1108.08370	-0.82460	9.98810	7.52020	K562	MAK16
RP11-313J2.1	ENSG00000215146.4	562.56190	1056.00650	-0.90850	13.97040	11.94930	K562	METAP2
RP11-313J2.1	ENSG00000215146.4	963.13940	1383.10970	-0.52210	8.76670	7.40260	K562	MTPAP
RP11-313J2.1	ENSG00000215146.4	427.41250	909.00170	-1.08870	10.53700	8.40190	K562	NAA15
RP11-313J2.1	ENSG00000215146.4	523.00580	750.68940	-0.52140	4.98250	3.32860	K562	NCBP2
RP11-313J2.1	ENSG00000215146.4	1193.81970	1536.73950	-0.36430	6.44240	5.36740	K562	NSUN2
RP11-313J2.1	ENSG00000215146.4	549.10880	818.36580	-0.57570	4.57870	2.54610	K562	NUSAP1
RP11-313J2.1	ENSG00000215146.4	492.80350	1090.60370	-1.14600	7.36430	5.48910	K562	PABPN1
RP11-313J2.1	ENSG00000215146.4	786.29690	1020.88380	-0.37670	2.42350	1.64660	K562	PCBP3
RP11-313J2.1	ENSG00000215146.4	506.87090	762.38950	-0.58890	4.48350	2.08590	K562	PES1
RP11-313J2.1	ENSG00000215146.4	618.99470	811.54990	-0.39080	2.90720	1.44230	K562	PHF6
RP11-313J2.1	ENSG00000215146.4	823.75600	1476.77350	-0.84220	12.35620	10.23640	K562	PPIG
RP11-313J2.1	ENSG00000215146.4	611.02820	1296.81410	-1.08570	6.14130	3.66920	K562	PPP1R8
RP11-313J2.1	ENSG00000215146.4	410.89930	783.06010	-0.93030	10.36240	8.90460	K562	PRPF8
RP11-313J2.1	ENSG00000215146.4	444.59420	745.33510	-0.74540	7.33220	5.72820	K562	PSIP1
RP11-313J2.1	ENSG00000215146.4	699.15290	1057.99540	-0.59770	3.32710	2.60630	K562	PTBP1
RP11-313J2.1	ENSG00000215146.4	2350.22280	2861.35850	-0.28390	2.76550	1.80600	K562	PUM2
RP11-313J2.1	ENSG00000215146.4	414.85360	1081.96040	-1.38300	11.40490	10.34970	K562	PUS1
RP11-313J2.1	ENSG00000215146.4	541.39650	1054.01090	-0.96110	6.68640	5.79060	K562	RBM15
RP11-313J2.1	ENSG00000215146.4	497.36120	1014.85470	-1.02890	5.84330	4.56230	K562	RBM22
RP11-313J2.1	ENSG00000215146.4	686.84320	1341.76580	-0.96610	4.99120	2.76600	K562	RBM39
RP11-313J2.1	ENSG00000215146.4	819.26960	1021.23930	-0.31790	3.25730	1.53700	K562	RPS10
RP11-313J2.1	ENSG00000215146.4	243.26600	797.68530	-1.71330	25.25090	22.84600	K562	RPS19
RP11-313J2.1	ENSG00000215146.4	573.73910	796.65820	-0.47360	2.81000	1.79980	K562	RPS3
RP11-313J2.1	ENSG00000215146.4	388.07740	997.50650	-1.36200	7.87470	5.49840	K562	SF1
RP11-313J2.1	ENSG00000215146.4	1252.98570	1516.39890	-0.27530	2.76740	1.95270	K562	SF3A3
RP11-313J2.1	ENSG00000215146.4	639.09500	1028.97660	-0.68710	6.18600	4.70000	K562	SF3B1
RP11-313J2.1	ENSG00000215146.4	567.89210	842.75930	-0.56950	2.12860	1.38050	K562	SF3B4
RP11-313J2.1	ENSG00000215146.4	727.71680	1216.24910	-0.74100	3.19620	1.75820	K562	SFPQ
RP11-313J2.1	ENSG00000215146.4	1120.35340	1700.87500	-0.60230	4.01350	1.88990	K562	SMN1
RP11-313J2.1	ENSG00000215146.4	430.76650	1145.38610	-1.41090	9.58830	6.86600	K562	SNRNP200
RP11-313J2.1	ENSG00000215146.4	375.90580	644.53680	-0.77790	7.41320	5.50700	K562	SRFBP1
RP11-313J2.1	ENSG00000215146.4	930.55550	1553.58600	-0.73940	19.23990	17.10550	K562	SRPK2
RP11-313J2.1	ENSG00000215146.4	696.56360	1037.11350	-0.57420	3.18740	2.43340	K562	SRSF1
RP11-313J2.1	ENSG00000215146.4	642.36320	979.29070	-0.60830	4.04700	2.73500	K562	SRSF5
RP11-313J2.1	ENSG00000215146.4	859.16230	1370.19020	-0.67340	2.86960	1.40960	K562	SUPT6H
RP11-313J2.1	ENSG00000215146.4	648.31680	1012.59630	-0.64330	2.86960	2.03380	K562	TIA1
RP11-313J2.1	ENSG00000215146.4	305.44950	716.90290	-1.23080	15.38930	13.06440	K562	TIAL1
RP11-313J2.1	ENSG00000215146.4	698.24880	993.27710	-0.50850	2.77210	1.67890	K562	TRA2A
RP11-313J2.1	ENSG00000215146.4	428.05320	761.47710	-0.83100	9.46230	7.46960	K562	TRIM56
RP11-313J2.1	ENSG00000215146.4	1304.29580	1629.43900	-0.32110	4.48010	3.58920	K562	UPF1
RP11-313J2.1	ENSG00000215146.4	1071.02410	1449.88290	-0.43690	7.48170	6.15490	K562	WDR43
RP11-313J2.1	ENSG00000215146.4	1821.00840	2242.11290	-0.30010	2.68170	1.41630	K562	WRN
RP11-313J2.1	ENSG00000215146.4	1700.72230	2131.75950	-0.32590	2.88490	2.00000	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-313J2.1 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-313J2.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-313J2.1	ENSG00000215146.4	chr10	-	42835948	42836004	42827313	42833688	42863263	42863422	0.62800	0.00007	0.06587	included	K562	TROVE2
SE	RP11-313J2.1	ENSG00000215146.4	chr10	-	42835963	42836004	42833230	42833688	42863263	42863422	0.28400	0.00001	0.01262	included	K562	PUM2
SE	RP11-313J2.1	ENSG00000215146.4	chr10	-	42835948	42836004	42827313	42833688	42863263	42863422	0.45800	0.00003	0.01159	included	K562	EIF4G2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-313J2.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-313J2.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-313J2.1 is not avaliable on ENCORE database.

4 proteins are bound to RP11-313J2.1 RNA:

eCLIP assay for RP11-313J2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-313J2.1 is not available on ENCORE database.

83 RBPs can affect the gene expression of RP11-313J2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-313J2.1 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-313J2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-313J2.1 is not avaliable on ENCORE database.