APOC1

General Information

Gene Name       : APOC1
Gene ID             : ENSG00000130208.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APOC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APOC1ENSG00000130208.90.372.571.47ENCSR000AEF
HepG2APOC1ENSG00000130208.9417.56362.39389.98ENCSR985KAT
K562APOC1ENSG00000130208.9172.55202.89187.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for APOC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • APOC1 RNA is bound by 18 proteins.  







eCLIP assay for APOC1 is not avaliable on ENCORE database.





18 proteins are bound to APOC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194542249445422580+3'-UTR6.197049.70511K562PCBP1
chr194542242845422549+3'-UTR,CDS,intron-Proximal3.315854.40995K562GRWD1
chr194542255445422585+3'-UTR6.14815400.00000HepG2LARP4
chr194542252145422541+3'-UTR5.50977400.00000HepG2LARP4
chr194542252245422573+3'-UTR4.059345.05732HepG2ZNF800
chr194542245645422591+3'-UTR,CDS5.7659625.49809K562PABPC4
chr194542242945422457+3'-UTR,CDS,intron-Proximal4.636807.95120HepG2SND1
chr194542254945422591+3'-UTR3.2992612.14892K562IGF2BP2
chr194542242945422432+3'-UTR,CDS,intron-Proximal3.452194.60891K562SND1
chr194542253545422586+3'-UTR4.2694149.72467HepG2PCBP2
chr194542249545422573+3'-UTR3.8768717.48189HepG2RPS3
chr194542245245422521+3'-UTR,CDS5.1584276.62463HepG2LARP4
chr194542252145422580+3'-UTR4.238898.25782K562LARP4
chr194542245345422584+3'-UTR,CDS3.237697.25129K562UCHL5
chr194542248245422535+3'-UTR,CDS3.8549031.36734HepG2PCBP2
chr194542254245422554+3'-UTR5.47171400.00000HepG2LARP4
chr194542249345422574+3'-UTR4.5926518.28636HepG2PCBP1
chr194541808445418150+5'-UTR,CDS,intron-Proximal3.002169.43971HepG2BUD13
chr194541945245419497+5'-UTR,CDS,intron-Distal3.9674928.40391HepG2DDX3X
chr194541798945418031+5'-UTR,intron-Distal,intron-Proximal6.0901215.41274HepG2AQR
chr194541956645419583+5'-UTR,CDS,intron-Distal,intron-Proximal4.8652410.45305HepG2SND1
chr194541806645418141+5'-UTR,intron-Proximal4.973749.68645HepG2AQR
chr194541949345419549+5'-UTR,CDS,intron-Distal5.2996412.63857K562DDX3X
chr194541949845419554+5'-UTR,CDS,intron-Distal5.6514648.89939HepG2LARP4
chr194541806845418142+5'-UTR,intron-Proximal4.774927.34038HepG2PRPF4
chr194541807645418142+5'-UTR,intron-Proximal3.2730312.85279HepG2EFTUD2
chr194541944645419452+5'-UTR,CDS,intron-Distal,intron-Proximal3.5609021.05445HepG2LARP4
chr194541955545419576+5'-UTR,CDS,intron-Distal3.094245.52906K562SND1
chr194541945045419493+5'-UTR,CDS,intron-Distal6.1667713.89420K562DDX3X
chr194541948445419539+5'-UTR,CDS,intron-Distal6.8527515.36591K562PABPC4
chr194541949945419554+5'-UTR,CDS,intron-Distal4.1042414.07667HepG2RPS3
chr194541944545419485+5'-UTR,CDS,intron-Distal,intron-Proximal4.4853520.93577HepG2RPS3
chr194541797145418034+5'-UTR,intron-Distal,intron-Proximal4.9862830.60562HepG2PRPF8
chr194541798545417990+5'-UTR,intron-Distal5.2107216.03443HepG2DDX3X
chr194541944645419450+5'-UTR,CDS,intron-Distal,intron-Proximal5.659764.26442K562DDX3X
chr194541950845419558+5'-UTR,CDS,intron-Distal3.7354110.43121HepG2SND1
chr194541943645419500+5'-UTR,CDS,intron-Distal,intron-Proximal3.552154.44431K562BUD13
chr194541957645419582+5'-UTR,CDS,intron-Distal3.166814.30304K562SND1
chr194541812745418151+5'-UTR,CDS,intron-Proximal5.2602021.71690HepG2DDX3X
chr194541777745417825+5'-UTR,intron-Proximal6.080368.14804HepG2EFTUD2
chr194541944545419452+5'-UTR,CDS,intron-Distal,intron-Proximal4.1680322.25719HepG2DDX3X
chr194541813545418193+5'-UTR,CDS3.013425.94750K562DDX55
chr194541942445419474+5'-UTR,CDS,intron-Distal,intron-Proximal4.256277.95190HepG2AQR
chr194541945245419479+5'-UTR,CDS,intron-Distal3.6677628.17951HepG2LARP4
chr194541948545419555+5'-UTR,CDS,intron-Distal3.1188012.54427K562SND1
chr194541817045418206+CDS4.7443124.75733HepG2DDX3X
chr194541819345418206+CDS3.9894212.11309HepG2RPS3
chr194541817945418206+CDS3.213283.27723HepG2AKAP1
chr194541815345418206+CDS5.651216.02664K562DDX3X
chr194541817945418206+CDS3.8502330.85273HepG2LARP4
chr194541800345418034+intron-Distal,intron-Proximal5.202925.24235HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APOC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APOC1 is not available on ENCORE database.

  • 157 RBPs can affect the levels of APOC1.  








The Knockdown/knockout RNA-Seq assay for APOC1 is not available on ENCORE database.





157 RBPs can affect the gene expression of APOC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APOC1ENSG00000130208.51864.076902612.81380-0.487105.928504.41810HepG2AATF
APOC1ENSG00000130208.52460.136004023.03580-0.709506.506105.65430HepG2ACO1
APOC1ENSG00000130208.52359.5081011852.03860-2.3286078.9216076.73670HepG2AKAP1
APOC1ENSG00000130208.54442.219704984.05300-0.166001.907701.31810HepG2AUH
APOC1ENSG00000130208.53093.917602216.328700.481204.005302.94080HepG2BCLAF1
APOC1ENSG00000130208.51365.50250805.665800.761101.975101.46180HepG2BOP1
APOC1ENSG00000130208.51515.779102336.04580-0.624005.326103.95470HepG2CCAR1
APOC1ENSG00000130208.57141.356709316.73140-0.383603.736102.84660HepG2CIRBP
APOC1ENSG00000130208.52239.31450739.570201.598206.397905.38580HepG2CPSF6
APOC1ENSG00000130208.52480.196201891.961700.390502.405001.45910HepG2YBX3
APOC1ENSG00000130208.54829.780504043.485000.256303.761403.03460HepG2CELF1
APOC1ENSG00000130208.56651.926004347.560200.6135017.4711015.89850HepG2DAZAP1
APOC1ENSG00000130208.52164.737602882.04600-0.412904.595903.74690HepG2DDX21
APOC1ENSG00000130208.53865.477202346.506400.720004.718803.09550HepG2DDX27
APOC1ENSG00000130208.56834.3103011352.73240-0.7322011.010909.83970HepG2DDX3X
APOC1ENSG00000130208.51268.459202218.10220-0.8062015.9518013.20650HepG2DDX52
APOC1ENSG00000130208.53503.907601924.024000.864706.543805.04740HepG2DDX5
APOC1ENSG00000130208.57845.121209753.70130-0.314202.260801.69700HepG2DDX6
APOC1ENSG00000130208.53285.007901791.787400.8744018.0388015.92390HepG2DHX30
APOC1ENSG00000130208.54400.139501857.724201.2439058.9163056.26960HepG2DNAJC21
APOC1ENSG00000130208.52084.124301841.378700.178601.989801.42000HepG2DNAJC2
APOC1ENSG00000130208.52035.102202646.37560-0.378903.210902.22360HepG2EEF2
APOC1ENSG00000130208.51635.557502206.06080-0.431703.984402.64710HepG2EFTUD2
APOC1ENSG00000130208.51671.771702148.21350-0.361802.852401.93710HepG2EIF3D
APOC1ENSG00000130208.57601.9751010359.78420-0.446503.900303.14530HepG2EIF4A3
APOC1ENSG00000130208.54163.5112010088.05030-1.2768020.4655018.71460HepG2EIF4B
APOC1ENSG00000130208.55201.481504289.289200.278104.402303.38970HepG2EIF4G1
APOC1ENSG00000130208.53205.736805722.24800-0.8359035.7428034.02620HepG2ETF1
APOC1ENSG00000130208.53091.206803930.45920-0.346502.271801.51550HepG2EWSR1
APOC1ENSG00000130208.54110.352502746.783400.581409.454307.55710HepG2FASTKD2
APOC1ENSG00000130208.51604.305602935.14460-0.871502.468501.73790HepG2FIP1L1
APOC1ENSG00000130208.53869.645702087.422700.8904013.8949011.47980HepG2FKBP4
APOC1ENSG00000130208.55334.976304067.537200.391203.126301.37080HepG2FMR1
APOC1ENSG00000130208.52273.097406701.99540-1.5599063.5706060.36630HepG2FUBP3
APOC1ENSG00000130208.51531.053702756.77820-0.848507.934906.13880HepG2FUS
APOC1ENSG00000130208.53149.4832010454.72270-1.7310056.3116053.68410HepG2FXR1
APOC1ENSG00000130208.55080.986109697.16540-0.9325015.8025014.27200HepG2G3BP1
APOC1ENSG00000130208.55325.7722010296.25140-0.9511019.2612016.99080HepG2G3BP2
APOC1ENSG00000130208.5883.053101912.69070-1.1150020.2672018.11380HepG2GEMIN5
APOC1ENSG00000130208.51527.77100838.155200.866003.731202.99670HepG2GPKOW
APOC1ENSG00000130208.52645.189303840.32440-0.537905.304103.99680HepG2HDGF
APOC1ENSG00000130208.51614.789502645.32460-0.712104.067202.35870HepG2HLTF
APOC1ENSG00000130208.52608.301401595.221600.7093019.2073017.54350HepG2HNRNPF
APOC1ENSG00000130208.56604.385009821.88020-0.572608.675607.49180HepG2HNRNPK
APOC1ENSG00000130208.52622.90740799.885501.7132021.8516020.34700HepG2HNRNPLL
APOC1ENSG00000130208.52745.242302072.397300.405508.144807.14430HepG2HNRNPU
APOC1ENSG00000130208.53464.581501570.820701.1411019.1902017.47550HepG2IGF2BP1
APOC1ENSG00000130208.54951.778009856.55720-0.9931020.0574018.42980HepG2IGF2BP2
APOC1ENSG00000130208.53693.945909251.56250-1.324507.645206.06740HepG2IGF2BP3
APOC1ENSG00000130208.52680.840102116.881900.340604.433703.52550HepG2ILF2
APOC1ENSG00000130208.56463.196509914.75930-0.617305.861204.35280HepG2KHSRP
APOC1ENSG00000130208.52373.105603253.50590-0.455202.616001.40890HepG2KRR1
APOC1ENSG00000130208.57037.9098010458.38210-0.571407.008705.98000HepG2MAGOH
APOC1ENSG00000130208.53460.2242010516.56930-1.6037041.6479039.43750HepG2MATR3
APOC1ENSG00000130208.53422.4490010764.01110-1.6531047.4852045.12300HepG2NCBP2
APOC1ENSG00000130208.51273.565702302.98440-0.854603.197102.01760HepG2NONO
APOC1ENSG00000130208.55455.302409584.75700-0.8131012.9519011.41860HepG2PABPC4
APOC1ENSG00000130208.53320.959709083.10300-1.4516059.1525057.02840HepG2PCBP1
APOC1ENSG00000130208.51477.182001776.52880-0.266202.466801.30950HepG2PKM
APOC1ENSG00000130208.51880.691502742.94030-0.544503.501202.14190HepG2PRPF6
APOC1ENSG00000130208.53173.716709242.89230-1.5422058.5764056.78920HepG2PTBP1
APOC1ENSG00000130208.55118.000704115.315700.314502.222801.68050HepG2PUF60
APOC1ENSG00000130208.53836.912504368.64720-0.187203.029602.41490HepG2PUM1
APOC1ENSG00000130208.55634.875104365.420200.368205.535304.60050HepG2PUM2
APOC1ENSG00000130208.52759.564504097.59670-0.570305.249404.44980HepG2PUS1
APOC1ENSG00000130208.54436.9903010009.22490-1.1737042.9719041.05350HepG2QKI
APOC1ENSG00000130208.51319.207802517.43520-0.932307.381206.26050HepG2RAVER1
APOC1ENSG00000130208.53728.537004782.76370-0.359206.237405.53510HepG2RBM22
APOC1ENSG00000130208.54025.681809084.41380-1.1742041.1636038.85400HepG2RBM25
APOC1ENSG00000130208.52912.3714010286.04010-1.8204076.6651074.79820HepG2NELFE
APOC1ENSG00000130208.53601.327909580.79500-1.4116048.0057046.08720HepG2RECQL
APOC1ENSG00000130208.54029.343101718.701801.2291013.7240012.41960HepG2RPLP0
APOC1ENSG00000130208.5942.838702090.36710-1.1487029.2159027.57730HepG2RPS19
APOC1ENSG00000130208.52683.977701845.549900.5402015.0981013.77490HepG2SAFB2
APOC1ENSG00000130208.52749.385302097.912900.390103.443902.39120HepG2SERBP1
APOC1ENSG00000130208.51511.891503031.78940-1.0038010.793709.39700HepG2SF3A3
APOC1ENSG00000130208.53697.411809622.15570-1.3798057.1545055.16230HepG2SF3B4
APOC1ENSG00000130208.55276.255303946.065000.4190013.6719012.31600HepG2SLBP
APOC1ENSG00000130208.52008.02940880.847701.188704.239403.26520HepG2SNRNP70
APOC1ENSG00000130208.52829.621505401.99690-0.9329051.4089049.96130HepG2SRFBP1
APOC1ENSG00000130208.52290.9186010043.80990-2.1323097.2949095.43720HepG2SRSF1
APOC1ENSG00000130208.53089.663301567.311900.9791021.2786019.68080HepG2SRSF7
APOC1ENSG00000130208.56225.946204690.284200.4085011.0305010.14010HepG2SSB
APOC1ENSG00000130208.53505.931504621.08240-0.3984010.779709.68790HepG2SUCLG1
APOC1ENSG00000130208.55319.454902496.539501.0912017.0490015.62110HepG2SUPV3L1
APOC1ENSG00000130208.53392.315609028.77390-1.4123034.0496032.36430HepG2TAF15
APOC1ENSG00000130208.52268.084301673.326900.438703.767102.62340HepG2TFIP11
APOC1ENSG00000130208.54494.171308295.14580-0.8842025.0794022.61780HepG2TIA1
APOC1ENSG00000130208.53019.129102013.647900.584209.580408.74760HepG2TIAL1
APOC1ENSG00000130208.51749.708802528.95480-0.531403.558301.89730HepG2TRA2A
APOC1ENSG00000130208.53383.380702031.727100.7357025.5994024.10080HepG2TRIM56
APOC1ENSG00000130208.51526.354202509.72290-0.717401.981401.44010HepG2U2AF1
APOC1ENSG00000130208.52873.928001474.764700.9624016.2659014.46150HepG2UCHL5
APOC1ENSG00000130208.54690.455302285.996401.0368012.9148010.65840HepG2UPF2
APOC1ENSG00000130208.51360.852902595.86730-0.9317035.5581033.77640HepG2UTP3
APOC1ENSG00000130208.51328.750302476.80870-0.898406.190704.31210HepG2XRCC5
APOC1ENSG00000130208.51856.147502769.23290-0.577204.224802.92420HepG2XRCC6
APOC1ENSG00000130208.54345.504202457.570100.8222013.0991011.54250HepG2XRN2
APOC1ENSG00000130208.5210.80080485.97960-1.205004.739003.14400K562AARS
APOC1ENSG00000130208.51386.49230713.518700.9583025.1746023.57510K562AGGF1
APOC1ENSG00000130208.51143.14760784.067100.543905.876404.31330K562AKAP8
APOC1ENSG00000130208.51428.31800742.453000.9438013.0267011.45600K562AKAP8L
APOC1ENSG00000130208.5857.120201081.59710-0.335602.950701.66880K562APOBEC3C
APOC1ENSG00000130208.5987.83170820.080200.268402.184701.32940K562BCLAF1
APOC1ENSG00000130208.5431.28590264.965600.702704.711603.56180K562BOP1
APOC1ENSG00000130208.51056.84640753.975400.487103.723801.94910K562CEBPZ
APOC1ENSG00000130208.51170.59760525.376501.155705.749104.15760K562CNOT7
APOC1ENSG00000130208.5725.74230281.709501.3651023.2849020.96540K562CPSF6
APOC1ENSG00000130208.5816.18700622.153300.391503.072401.95330K562CSTF2
APOC1ENSG00000130208.51991.154301507.600300.401304.207502.99660K562CELF1
APOC1ENSG00000130208.51274.91800866.502700.557005.809804.01510K562DDX21
APOC1ENSG00000130208.5530.23080718.91570-0.439204.690502.96000K562DDX27
APOC1ENSG00000130208.51346.762501034.947000.379803.613402.40440K562DDX3X
APOC1ENSG00000130208.5405.56220615.42880-0.601706.643305.69670K562DDX47
APOC1ENSG00000130208.51344.785301049.278500.357903.950702.30420K562DDX6
APOC1ENSG00000130208.51150.74850798.904900.526407.561705.98360K562DKC1
APOC1ENSG00000130208.5805.40790432.588200.896608.798406.55170K562DNAJC21
APOC1ENSG00000130208.51158.96110810.800600.515306.928905.86640K562EIF2S2
APOC1ENSG00000130208.594.74570409.18830-2.1106012.6673010.53630K562EIF3A
APOC1ENSG00000130208.5320.36030540.01640-0.753306.731205.50190K562EIF3G
APOC1ENSG00000130208.5744.230401081.23070-0.538905.562304.40150K562EIF4A3
APOC1ENSG00000130208.5735.53090429.140700.777203.244901.34200K562FAM120A
APOC1ENSG00000130208.5411.00390577.72520-0.491203.537901.70950K562FASTKD2
APOC1ENSG00000130208.5221.13450462.02610-1.063104.125902.71270K562FKBP4
APOC1ENSG00000130208.5566.99350286.681000.983806.628905.28390K562FMR1
APOC1ENSG00000130208.5562.27180243.008901.210203.702402.63080K562FTO
APOC1ENSG00000130208.5380.757201124.42870-1.5622046.8782044.56830K562FXR1
APOC1ENSG00000130208.5260.64290569.31220-1.127108.294006.93600K562G3BP2
APOC1ENSG00000130208.5792.97490483.147500.714706.161304.04540K562GEMIN5
APOC1ENSG00000130208.5396.52750513.35420-0.372502.459001.38910K562GLRX3
APOC1ENSG00000130208.5654.22390268.943301.282404.462103.45990K562GPKOW
APOC1ENSG00000130208.53918.516001080.333301.8587056.8840053.56800K562GRSF1
APOC1ENSG00000130208.5943.68670604.158000.643302.788301.56410K562HNRNPA2B1
APOC1ENSG00000130208.5823.21280491.665800.743504.682602.63780K562HNRNPAB
APOC1ENSG00000130208.5273.73270531.22490-0.956604.339303.60880K562HNRNPC
APOC1ENSG00000130208.5957.97040725.088400.401702.801101.55760K562HNRNPK
APOC1ENSG00000130208.51021.94740556.211500.877505.077403.59690K562HNRNPL
APOC1ENSG00000130208.5724.20770294.836901.296409.820607.83710K562HNRNPM
APOC1ENSG00000130208.51202.08130485.731201.3072010.638209.10430K562HSPD1
APOC1ENSG00000130208.51408.45160866.751600.700304.726202.35500K562IGF2BP1
APOC1ENSG00000130208.5581.01230420.348200.466902.958601.41310K562ILF3
APOC1ENSG00000130208.5970.72300787.912700.300902.156201.43870K562KIF1C
APOC1ENSG00000130208.5526.87930762.96090-0.534105.069703.92520K562MAGOH
APOC1ENSG00000130208.51001.81690754.238900.409403.121301.96230K562MAK16
APOC1ENSG00000130208.5461.79600761.42670-0.721408.519106.79880K562MATR3
APOC1ENSG00000130208.5660.72100262.527101.331508.807107.17900K562METAP2
APOC1ENSG00000130208.51713.806301306.555900.391303.077101.88200K562MSI2
APOC1ENSG00000130208.51035.10110539.729700.9394020.7060018.78910K562MTPAP
APOC1ENSG00000130208.51107.94490475.239101.2211018.0520014.68580K562NONO
APOC1ENSG00000130208.51031.59270599.661600.7826017.5808015.92330K562NSUN2
APOC1ENSG00000130208.5736.04960505.594100.541703.514101.33510K562PA2G4
APOC1ENSG00000130208.5756.55150504.733000.583802.628901.43290K562PABPC1
APOC1ENSG00000130208.5864.00620528.612200.708703.202402.11720K562PABPN1
APOC1ENSG00000130208.5494.64030745.74950-0.592306.196404.09960K562PCBP1
APOC1ENSG00000130208.5483.24720635.92570-0.396102.124801.39470K562PCBP3
APOC1ENSG00000130208.5924.22440456.676801.0170012.099608.51100K562PES1
APOC1ENSG00000130208.51792.129001259.598000.508606.186704.15570K562PNPT1
APOC1ENSG00000130208.51089.99050406.926201.4214013.5507011.31290K562PPIG
APOC1ENSG00000130208.51101.15520628.603600.808703.864002.03720K562PPP1R8
APOC1ENSG00000130208.51259.42290476.364201.4025018.6860015.91660K562PSIP1
APOC1ENSG00000130208.5517.64320741.25750-0.518004.967404.10150K562PTBP1
APOC1ENSG00000130208.51709.679101337.427100.354202.571501.78550K562PUF60
APOC1ENSG00000130208.52174.426001422.889700.611709.569407.51630K562PUM1
APOC1ENSG00000130208.52608.576601393.817300.9041015.3758013.16540K562PUM2
APOC1ENSG00000130208.51829.28500736.278201.3129028.4794026.72040K562PUS1
APOC1ENSG00000130208.51072.89570717.418200.580507.874106.90480K562RBM15
APOC1ENSG00000130208.5927.60580434.936201.0926017.8844015.38730K562RCC2
APOC1ENSG00000130208.5408.51520748.01990-0.872709.748507.63420K562NELFE
APOC1ENSG00000130208.5256.94810477.54600-0.894206.403905.15030K562RPS19
APOC1ENSG00000130208.5377.88230850.38750-1.1702010.728908.61940K562RPS3
APOC1ENSG00000130208.5800.11060479.338700.739105.123903.30690K562RRP9
APOC1ENSG00000130208.5235.60770434.66810-0.883505.409903.89240K562SAFB
APOC1ENSG00000130208.5217.14620449.36700-1.049209.964707.42810K562SDAD1
APOC1ENSG00000130208.51035.94090591.752500.8078014.8031013.02350K562SF3A3
APOC1ENSG00000130208.51499.08030589.577801.346209.431306.55250K562SFPQ
APOC1ENSG00000130208.5607.38790443.011300.455202.530401.32670K562SLBP
APOC1ENSG00000130208.5313.77260491.60060-0.647803.237601.33210K562SMN1
APOC1ENSG00000130208.5325.59810495.86900-0.606904.611802.41790K562SND1
APOC1ENSG00000130208.5718.84300468.433800.617705.038202.77030K562SRP68
APOC1ENSG00000130208.5338.52360606.26680-0.8407011.9740010.20080K562SRPK2
APOC1ENSG00000130208.5923.87050726.669400.346302.122501.49390K562SRSF1
APOC1ENSG00000130208.5929.32900686.259500.437303.475402.27530K562SRSF5
APOC1ENSG00000130208.51154.87410773.089200.578904.736903.18660K562SRSF7
APOC1ENSG00000130208.5376.07640555.15910-0.561905.017102.92360K562SRSF9
APOC1ENSG00000130208.5799.95850557.038100.522005.725303.76690K562SSB
APOC1ENSG00000130208.5358.45380592.98510-0.726205.450203.18280K562TBRG4
APOC1ENSG00000130208.5811.39320458.144500.824507.896206.24840K562TIAL1
APOC1ENSG00000130208.5740.39990418.729600.822203.188701.67670K562TRIP6
APOC1ENSG00000130208.52105.399501508.191800.481205.076203.19170K562UBE2L3
APOC1ENSG00000130208.5681.91430480.418500.505203.308202.18890K562UCHL5
APOC1ENSG00000130208.51159.01170635.836000.866108.469607.29480K562UPF1
APOC1ENSG00000130208.51514.93390746.541101.020907.258004.88320K562UTP18
APOC1ENSG00000130208.5288.43800565.78430-0.9720015.2044013.43420K562WDR43
APOC1ENSG00000130208.5971.40620489.375100.989007.432605.16750K562XRN2
APOC1ENSG00000130208.52692.696601353.889200.991807.436005.90350K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APOC1 is not available on ENCORE database.





46 RBPs can affect the splicing of APOC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.092000.000000.00000includedHepG2G3BP1
SEAPOC1ENSG00000130208.5chr19+454194464541958245418125454182064542242945422599-0.065000.000000.00003excludedK562SRSF1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.066000.000000.00002includedHepG2RBM22
SEAPOC1ENSG00000130208.5chr19+454183544541847445418125454182064542242945422606-0.061000.001350.07507excludedHepG2RBM22
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.067000.000020.03131includedHepG2CSTF2
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.076000.000000.00022includedHepG2PRPF8
SEAPOC1ENSG00000130208.5chr19+454179284541799045417503454177464541812845418206-0.103000.000040.02897excludedHepG2DHX30
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.171000.000000.00000includedHepG2HNRNPM
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.104000.000010.02373includedHepG2TROVE2
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.125000.000000.00000includedHepG2DKC1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.152000.000000.00000includedHepG2HNRNPK
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.103000.000000.00149includedHepG2TRA2A
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.080000.001120.08036includedHepG2TBRG4
SEAPOC1ENSG00000130208.5chr19+4541792845418031454175034541774645418128454182060.150000.000000.00000includedHepG2QKI
SEAPOC1ENSG00000130208.5chr19+454181284541820645417928454179904541944645419582-0.117000.000000.00000excludedHepG2U2AF2
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.137000.000000.00000includedHepG2AKAP1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.117000.000000.00000includedHepG2LARP7
SEAPOC1ENSG00000130208.5chr19+454179284541799045417503454177464541812845418206-0.082000.000330.03580excludedHepG2SRSF7
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.124000.000000.00010includedHepG2FAM120A
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.097000.000000.00026includedHepG2LIN28B
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.084000.000000.00058includedHepG2TIA1
SEAPOC1ENSG00000130208.5chr19+454179284541799045417503454177464541812845418206-0.071000.000230.06738excludedHepG2BCLAF1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.087000.000180.05142includedHepG2EFTUD2
SEAPOC1ENSG00000130208.5chr19+454181284541820645417928454179904541944645419582-0.271000.000000.00000excludedK562U2AF1
SEAPOC1ENSG00000130208.5chr19+4541792845418031454175034541774645418128454182060.132000.000000.00000includedHepG2DDX6
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.086000.000020.00580includedHepG2PCBP2
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.117000.000000.00002includedHepG2RBM15
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.141000.000000.00000includedHepG2SRSF1
SEAPOC1ENSG00000130208.5chr19+454194464541958245418128454182064542242945422599-0.114000.000000.00000excludedHepG2SRSF1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.071000.003110.07364includedHepG2SF3A3
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.081000.000000.00000includedHepG2SSB
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.076000.000000.00003includedHepG2IGF2BP3
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.121000.000000.00011includedHepG2GRSF1
SEAPOC1ENSG00000130208.5chr19+454179284541803145417503454177464541812845418206-0.097000.000000.00101excludedHepG2TIAL1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.074000.000000.00000includedHepG2SUPV3L1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.076000.000020.00177includedHepG2PCBP1
SEAPOC1ENSG00000130208.5chr19+4541944645419727454181284541820645422429454226010.065000.000000.00000includedHepG2NOL12
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.077000.000000.00015includedHepG2NOL12
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.098000.000000.00000includedHepG2SF3B4
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.112000.000000.00000includedHepG2TAF15
SEAPOC1ENSG00000130208.5chr19+454181284541820645417928454179904541944645419582-0.309000.000000.00000excludedK562U2AF2
SEAPOC1ENSG00000130208.5chr19+454194464541972745418128454182064542242945422601-0.070000.000720.02925excludedK562HNRNPU
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.086000.000230.05670includedHepG2EIF3D
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.126000.000000.00000includedHepG2FUBP3
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.113000.000000.00000includedHepG2SMNDC1
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.082000.000000.00000includedHepG2XRN2
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.059000.002770.09184includedHepG2HNRNPU
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.112000.000000.00001includedHepG2XRCC6
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.100000.000000.00000includedHepG2SRSF9
SEAPOC1ENSG00000130208.5chr19+454179284541803145417503454177464541812845418206-0.053000.000450.03341excludedHepG2SRSF9
SEAPOC1ENSG00000130208.5chr19+4541812845418184454179664541799045419446454196160.189000.000000.00059includedHepG2SLTM
SEAPOC1ENSG00000130208.5chr19+4541792845417990454175034541774645418128454182060.120000.000000.00085includedHepG2DDX52
SEAPOC1ENSG00000130208.5chr19+454179284541799045417503454177464541812845418206-0.060000.002440.04002excludedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for APOC1 is not avaliable on ENCORE database.