HAL

General Information

Gene Name       : HAL
Gene ID             : ENSG00000084110.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HAL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HALENSG00000084110.100.330.040.18ENCSR000AEF
HepG2HALENSG00000084110.102.061.901.98ENCSR985KAT
K562HALENSG00000084110.100.030.020.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HAL is not avaliable on ENCORE database.



Proteins bound to RNA
  • HAL RNA is bound by 9 proteins.  







eCLIP assay for HAL is not avaliable on ENCORE database.





9 proteins are bound to HAL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr129637172196371808-3'-UTR,CDS,intron-Distal,intron-Proximal3.831204.24993HepG2PPIG
chr129637435296374466-3'-UTR,CDS,intron-Distal,intron-Proximal3.945846.70085HepG2PPIG
chr129638756096387595-CDS,intron-Distal3.725096.97808HepG2BCLAF1
chr129638934996389428-intron-Distal,intron-Proximal4.738116.75344HepG2EFTUD2
chr129637799396378113-intron-Distal4.543495.60990HepG2KHSRP
chr129638448096384594-intron-Distal3.323357.26182HepG2PTBP1
chr129637801796378132-intron-Distal3.974753.16986HepG2QKI
chr129637473396374800-intron-Distal,intron-Proximal4.966593.79000HepG2U2AF2
chr129638325296383306-intron-Distal,intron-Proximal3.146473.35050HepG2SUGP2
chr129637950096379626-intron-Distal,intron-Proximal3.327013.78824HepG2KHSRP
chr129636966396369732-intron-Distal4.408804.15622HepG2TIAL1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HAL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HAL is not available on ENCORE database.

  • 166 RBPs can affect the levels of HAL.  








The Knockdown/knockout RNA-Seq assay for HAL is not available on ENCORE database.





166 RBPs can affect the gene expression of HAL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HALENSG00000084110.641.07330777.06630-4.2418024.9272022.24680HepG2AATF
HALENSG00000084110.6309.252501087.39640-1.814002.670801.74380HepG2ABCF1
HALENSG00000084110.668.491501248.01490-4.1876036.1120034.52370HepG2ACO1
HALENSG00000084110.6119.85160256.98640-1.100407.612506.06370HepG2ADAR
HALENSG00000084110.667.165208376.09030-6.96240258.99880255.38800HepG2AKAP1
HALENSG00000084110.6461.444101514.17780-1.7143018.3116015.93010HepG2AKAP8
HALENSG00000084110.63179.217506930.66510-1.1243024.1904022.19110HepG2ASCC1
HALENSG00000084110.6303.61380182.253500.736203.454202.40860HepG2BCCIP
HALENSG00000084110.6864.89330158.363002.4492046.5341043.68340HepG2BCLAF1
HALENSG00000084110.6764.4524098.810202.9516020.5069019.10870HepG2BOP1
HALENSG00000084110.62111.27390433.691902.28330102.8316099.50760HepG2CALR
HALENSG00000084110.636.43470436.68180-3.5832049.7897046.29720HepG2CCAR1
HALENSG00000084110.6943.839101607.90300-0.768605.137802.49220HepG2CDC40
HALENSG00000084110.62562.669406584.55930-1.3614034.2911032.06000HepG2CIRBP
HALENSG00000084110.6411.604101247.35690-1.5995011.9876010.80080HepG2CKAP4
HALENSG00000084110.61424.5017090.693103.97320106.79390103.62170HepG2CPSF6
HALENSG00000084110.6486.01560263.546900.8828010.063008.18700HepG2YBX3
HALENSG00000084110.618.99350112.57530-2.5673013.1386011.11680HepG2CSTF2
HALENSG00000084110.6361.71130796.22620-1.138304.018602.27240HepG2CSTF2T
HALENSG00000084110.6145.17070700.73360-2.2711059.8796057.68700HepG2CELF1
HALENSG00000084110.63089.04170753.600702.03520143.16720139.82310HepG2DAZAP1
HALENSG00000084110.6560.993601154.05720-1.040706.578105.37670HepG2DDX19B
HALENSG00000084110.653.27600855.92880-4.0059028.3477026.51040HepG2DDX21
HALENSG00000084110.6601.81120167.664301.8436011.504409.19510HepG2DDX27
HALENSG00000084110.6468.14530135.746101.7859012.063409.55870HepG2DDX28
HALENSG00000084110.63975.230908023.99050-1.0133019.4272017.93150HepG2DDX3X
HALENSG00000084110.61164.27100727.703200.677902.902301.57930HepG2DDX47
HALENSG00000084110.6107.62730756.71060-2.8137077.8054073.74840HepG2DDX52
HALENSG00000084110.63064.03440867.885401.819806.748305.22720HepG2DDX5
HALENSG00000084110.6206.882306891.99750-5.05800196.92460193.15010HepG2DDX6
HALENSG00000084110.63142.94090249.578303.65450199.23840194.88040HepG2DHX30
HALENSG00000084110.6466.260101193.91210-1.356509.235308.14210HepG2DKC1
HALENSG00000084110.62318.84990258.754503.16370210.48030206.81650HepG2DNAJC21
HALENSG00000084110.698.67400902.83210-3.1937083.9165080.58840HepG2EEF2
HALENSG00000084110.6387.03330752.62960-0.9595011.260709.06950HepG2EFTUD2
HALENSG00000084110.64149.471506626.21500-0.675309.343508.29320HepG2EIF2S1
HALENSG00000084110.6157.79330732.88880-2.2156039.3803036.46430HepG2EIF3D
HALENSG00000084110.6318.04870809.06680-1.347006.780505.21100HepG2EIF3G
HALENSG00000084110.62805.000907323.11910-1.3845027.3852025.40750HepG2EIF4A3
HALENSG00000084110.61032.063907129.37280-2.7882080.5436077.39400HepG2EIF4B
HALENSG00000084110.62185.97030743.352701.5561044.5091042.03850HepG2EIF4G1
HALENSG00000084110.63983.92790712.106002.4839025.1201022.90230HepG2EIF4G2
HALENSG00000084110.6592.021901219.19020-1.042205.155204.01840HepG2EWSR1
HALENSG00000084110.6252.76060655.03970-1.3738024.6142021.46880HepG2FAM120A
HALENSG00000084110.61939.50840816.283901.2484013.3909011.21010HepG2FASTKD2
HALENSG00000084110.641.620101097.75840-4.721108.118106.87640HepG2FIP1L1
HALENSG00000084110.6680.15830149.151202.1890035.3573031.60480HepG2FKBP4
HALENSG00000084110.62844.7333090.890304.9679079.4062075.52440HepG2FTO
HALENSG00000084110.63613.822104305.49730-0.252702.103301.41010HepG2FUBP3
HALENSG00000084110.641.45660973.11020-4.5529072.0964067.71940HepG2FUS
HALENSG00000084110.6272.619807387.59250-4.76010178.91490175.01640HepG2FXR1
HALENSG00000084110.61269.436406853.66860-2.4327060.7780057.88640HepG2G3BP1
HALENSG00000084110.63348.994707275.27260-1.1193025.1768022.66340HepG2G3BP2
HALENSG00000084110.649.23180652.54000-3.7284084.2022080.80450HepG2GEMIN5
HALENSG00000084110.6252.83730647.38570-1.356407.562205.73730HepG2GRSF1
HALENSG00000084110.6261.44230916.84650-1.8102023.3818019.31600HepG2GTF2F1
HALENSG00000084110.6531.835401191.26240-1.163407.809306.27060HepG2HDGF
HALENSG00000084110.636.32030261.23390-2.8465028.9948027.31030HepG2HNRNPA1
HALENSG00000084110.6232.97490577.08900-1.308609.343706.66820HepG2HNRNPAB
HALENSG00000084110.6489.13550290.588300.751205.934204.94660HepG2HNRNPC
HALENSG00000084110.61086.48390131.269603.0490034.8562032.79290HepG2HNRNPF
HALENSG00000084110.61192.459306938.57530-2.5407098.6112094.83630HepG2HNRNPK
HALENSG00000084110.62426.4998098.063804.62890165.82010162.53610HepG2HNRNPLL
HALENSG00000084110.6108.60500756.71030-2.800705.510504.21610HepG2HNRNPM
HALENSG00000084110.6373.02880288.666100.369802.156701.61400HepG2HNRNPU
HALENSG00000084110.61768.14010129.259203.7738017.1745015.54410HepG2IGF2BP1
HALENSG00000084110.6705.203606537.20550-3.2126039.0996035.84820HepG2IGF2BP3
HALENSG00000084110.6526.50180294.860500.8363012.4340011.00320HepG2ILF2
HALENSG00000084110.61467.34560681.790201.105707.938705.65170HepG2ILF3
HALENSG00000084110.6293.90940552.46380-0.910503.747401.86080HepG2CCAR2
HALENSG00000084110.6385.629001647.13190-2.0947021.3133018.04500HepG2KRR1
HALENSG00000084110.6119.96940461.16900-1.9426021.7254019.38920HepG2LARP4
HALENSG00000084110.6192.26350611.20310-1.668609.254407.29740HepG2LARP7
HALENSG00000084110.6915.44560613.442200.577404.394402.27410HepG2LSM11
HALENSG00000084110.61016.841507390.16660-2.8615090.0769086.77760HepG2MAGOH
HALENSG00000084110.6366.648207431.71190-4.34120158.54870154.45750HepG2MATR3
HALENSG00000084110.698.92820767.02740-2.9548041.1515037.78840HepG2METAP2
HALENSG00000084110.690.78860887.34870-3.288906.568405.37340HepG2MSI2
HALENSG00000084110.6928.26350100.132503.2125044.9193041.59390HepG2MTPAP
HALENSG00000084110.6917.940607606.91950-3.0508090.0242086.82110HepG2NCBP2
HALENSG00000084110.61240.24420552.703801.1659022.4744019.06870HepG2NIP7
HALENSG00000084110.63764.305401562.021801.268904.457502.64040HepG2NKRF
HALENSG00000084110.6435.72000747.26140-0.7782010.930109.45080HepG2NOL12
HALENSG00000084110.659.11320164.54890-1.477005.797304.18200HepG2NONO
HALENSG00000084110.6811.1365086.992203.2209062.7910060.18040HepG2NSUN2
HALENSG00000084110.6238.19080547.87470-1.201709.316006.60080HepG2PA2G4
HALENSG00000084110.64797.889506775.14300-0.497905.193304.21640HepG2PABPC4
HALENSG00000084110.674.97730285.71260-1.9300023.3296021.34070HepG2PARN
HALENSG00000084110.6541.407206980.07020-3.6885099999.9999999999.99999HepG2PCBP1
HALENSG00000084110.6549.62490921.22840-0.745105.320903.91280HepG2PCBP2
HALENSG00000084110.61740.20860586.859201.5681026.7734023.01140HepG2PHF6
HALENSG00000084110.6466.14000606.08260-0.378802.642101.44220HepG2PKM
HALENSG00000084110.6385.78940627.13220-0.701003.382501.69540HepG2PNPT1
HALENSG00000084110.6928.77710257.464601.8509055.1440052.12780HepG2PPIL4
HALENSG00000084110.6911.45930379.656201.263405.923704.83580HepG2PRPF4
HALENSG00000084110.6133.60680968.47450-2.8577037.9989034.53030HepG2PRPF6
HALENSG00000084110.642.36130138.23090-1.706308.133506.83090HepG2PRPF8
HALENSG00000084110.6304.92200697.96430-1.194704.844302.48220HepG2PSIP1
HALENSG00000084110.6135.717907102.46860-5.7096099999.9999999999.99999HepG2PTBP1
HALENSG00000084110.61039.61290713.287500.543402.884502.27750HepG2PUF60
HALENSG00000084110.6197.42200757.14070-1.9393053.5208051.60600HepG2PUM1
HALENSG00000084110.62169.62000756.615901.5197016.8664015.29910HepG2PUM2
HALENSG00000084110.6129.218901271.12760-3.2982027.4222025.85810HepG2PUS1
HALENSG00000084110.61079.033507692.17830-2.83370252.52440248.62230HepG2QKI
HALENSG00000084110.6204.86790889.11690-2.1177024.2976022.41320HepG2RAVER1
HALENSG00000084110.6396.008301438.78690-1.8613019.8429017.90840HepG2RBM15
HALENSG00000084110.6337.49310784.10200-1.216203.875101.70820HepG2RBM17
HALENSG00000084110.684.59920670.59720-2.986703.191602.64530HepG2RBM22
HALENSG00000084110.61852.266406981.13510-1.9142098.2683094.60080HepG2RBM25
HALENSG00000084110.6199.37170736.97120-1.886108.929107.13380HepG2RBM27
HALENSG00000084110.61682.87020886.234100.925108.363204.99880HepG2RBM34
HALENSG00000084110.6198.82610675.37290-1.7642012.276509.35790HepG2RBM47
HALENSG00000084110.6174.97060598.44920-1.774109.250207.34000HepG2RCC2
HALENSG00000084110.6114.200607904.37710-6.1130099999.9999999999.99999HepG2NELFE
HALENSG00000084110.6806.511107361.83230-3.1903099999.9999999999.99999HepG2RECQL
HALENSG00000084110.61534.08540141.467403.43870127.35740124.48530HepG2RPLP0
HALENSG00000084110.62330.35140873.182701.4161018.7513016.55320HepG2RPS10
HALENSG00000084110.629.44790713.14530-4.59800128.68370125.69860HepG2RPS19
HALENSG00000084110.6381.20480679.75390-0.834402.383101.63550HepG2RPS2
HALENSG00000084110.62682.91770701.826901.9345038.8059035.99490HepG2RPS3A
HALENSG00000084110.6383.95650693.80450-0.853603.563502.33890HepG2RPS5
HALENSG00000084110.6221.30370136.738700.694502.713501.93330HepG2RRP9
HALENSG00000084110.61630.13080257.061702.66470164.18770160.78570HepG2SAFB2
HALENSG00000084110.6934.19540660.906900.499203.165701.77040HepG2SART3
HALENSG00000084110.61184.64900715.733100.726908.491506.87540HepG2SERBP1
HALENSG00000084110.6109.73120757.81700-2.7879016.3229012.99390HepG2SF1
HALENSG00000084110.6173.107402711.77330-3.9695054.7559051.72940HepG2SF3A3
HALENSG00000084110.62113.6298097.032004.44500205.55170201.88430HepG2SF3B1
HALENSG00000084110.6904.315707394.61130-3.0316099999.9999999999.99999HepG2SF3B4
HALENSG00000084110.636.90550735.08470-4.3160028.6582024.29900HepG2SFPQ
HALENSG00000084110.62956.34840683.838102.1120018.3610016.84990HepG2SLBP
HALENSG00000084110.63701.22610867.290402.093308.662706.03590HepG2SLTM
HALENSG00000084110.680.36410299.76350-1.8992025.3944023.76530HepG2SMN1
HALENSG00000084110.6398.73580905.97140-1.1840013.0139010.87420HepG2SMNDC1
HALENSG00000084110.6477.07900170.671801.4829014.7166011.60850HepG2SRP68
HALENSG00000084110.647.826107718.36320-7.3344099999.9999999999.99999HepG2SRSF1
HALENSG00000084110.6389.66780704.21300-0.853805.190604.37460HepG2SRSF5
HALENSG00000084110.61405.83120128.981403.44610188.54640185.19980HepG2SRSF7
HALENSG00000084110.62338.418106279.29090-1.42510111.39100109.00800HepG2SRSF9
HALENSG00000084110.638.68250657.91780-4.088204.440703.82280HepG2SSB
HALENSG00000084110.6685.281601642.72120-1.2613012.5301010.11640HepG2SSRP1
HALENSG00000084110.61681.81550732.217801.199604.129702.64570HepG2STAU1
HALENSG00000084110.6182.36380610.33130-1.7428013.9656011.36040HepG2STIP1
HALENSG00000084110.687.23370800.93090-3.1987085.5939083.11490HepG2SUCLG1
HALENSG00000084110.6823.765801662.64410-1.013209.393407.02910HepG2SUGP2
HALENSG00000084110.61937.29620740.311201.387706.726505.30440HepG2SUPT6H
HALENSG00000084110.6550.15010178.383701.624706.290405.33150HepG2SUPV3L1
HALENSG00000084110.61247.712706937.53780-2.47510215.46740211.69310HepG2TAF15
HALENSG00000084110.6660.1097095.727602.7856038.3737036.25990HepG2TARDBP
HALENSG00000084110.61682.132406374.68190-1.92210102.2183097.85370HepG2TIA1
HALENSG00000084110.6180.80270892.58740-2.3036034.1430030.47510HepG2TRA2A
HALENSG00000084110.6188.87020582.35970-1.6245020.5171017.25620HepG2TROVE2
HALENSG00000084110.6217.53390787.87430-1.856708.117106.34010HepG2U2AF2
HALENSG00000084110.61230.29060737.479000.738206.775805.43750HepG2UBE2L3
HALENSG00000084110.61465.004502404.94180-0.715103.775002.97900HepG2UPF1
HALENSG00000084110.6399.94940163.342901.291803.337602.23020HepG2UPF2
HALENSG00000084110.61717.196802471.84270-0.525502.833401.77530HepG2UTP18
HALENSG00000084110.6162.804502321.85620-3.8341053.4346051.32740HepG2UTP3
HALENSG00000084110.61493.03720628.598701.247906.551904.87340HepG2XPO5
HALENSG00000084110.6433.12080874.12300-1.013108.617606.47610HepG2XRCC5
HALENSG00000084110.680.02890977.68640-3.6108055.0441051.58640HepG2XRCC6
HALENSG00000084110.6111.04940175.59920-0.661102.248001.58880HepG2XRN2
HALENSG00000084110.61111.59620374.583301.5692014.9566013.59830HepG2ZC3H8
HALENSG00000084110.61788.035802644.95660-0.564903.136902.56610HepG2ZNF622
HALENSG00000084110.6472.56010888.10730-0.910208.258205.91120HepG2ZRANB2
HALENSG00000084110.612.563100.858003.871902.445301.88750K562AQR
HALENSG00000084110.630.585501.398404.450906.426305.18420K562PUF60
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HAL is not available on ENCORE database.





8 RBPs can affect the splicing of HAL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.157000.005410.08085excludedHepG2U2AF1
SEHALENSG00000084110.6chr12-963808789638099296379842963799389638197096382018-0.064000.007790.07502excludedHepG2U2AF2
SEHALENSG00000084110.6chr12-963875499638761696387228963872669638770396387776-0.165000.001620.08150excludedHepG2AKAP1
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.252000.000110.01096excludedHepG2AKAP1
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.075000.000000.00002excludedHepG2DDX3X
SEHALENSG00000084110.6chr12-9636975096369815963674079636815096370206963702760.138000.000190.01344includedHepG2PTBP1
SEHALENSG00000084110.6chr12-963819709638201896377688963777699638417096384310-0.248000.000130.01020excludedHepG2PTBP1
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.241000.000030.00256excludedHepG2PTBP1
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.797000.000010.00038excludedHepG2SRSF1
SEHALENSG00000084110.6chr12-963808789638099296379842963799389638197096382018-0.062000.003550.08148excludedHepG2SF3A3
SEHALENSG00000084110.6chr12-963702069637027696367407963681509637037596370484-0.119000.000000.00002excludedHepG2SF3B4
A5SSHALENSG00000084110.6chr12-963745759637464196374592963746419637433396374499-0.056000.000400.03522shorterHepG2SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HAL is not avaliable on ENCORE database.