ELMOD3

General Information

Gene Name       : ELMOD3
Gene ID             : ENSG00000115459.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ELMOD3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ELMOD3ENSG00000115459.178.519.529.02ENCSR000AEF
HepG2ELMOD3ENSG00000115459.1713.8013.7613.78ENCSR985KAT
K562ELMOD3ENSG00000115459.177.999.598.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ELMOD3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ELMOD3 RNA is bound by 12 proteins.  







eCLIP assay for ELMOD3 is not avaliable on ENCORE database.





12 proteins are bound to ELMOD3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr28561845485618552+3'-UTR4.444505.18061HepG2LSM11
chr28561845185618562+3'-UTR3.792224.96777HepG2ZC3H11A
chr28559833285598398+3'-UTR,5'-UTR,CDS,intron-Proximal5.118604.48002K562AQR
chr28559842185598518+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.096423.45219HepG2RBFOX2
chr28561821385618309+3'-UTR3.397974.43569HepG2ZC3H11A
chr28558238285582480+5'-UTR,intron-Distal,intron-Proximal4.935908.08215HepG2EFTUD2
chr28558407685584162+5'-UTR,intron-Distal,intron-Proximal4.313603.67656K562U2AF2
chr28558407785584098+5'-UTR,intron-Distal,intron-Proximal4.8982612.94604HepG2U2AF2
chr28558414385584241+5'-UTR,intron-Distal3.597814.65365HepG2GRWD1
chr28558409885584150+5'-UTR,intron-Distal4.5793714.19929HepG2U2AF2
chr28558189085582040+5'-UTR,intron-Proximal3.4233210.93821HepG2PRPF8
chr28559476385594809+intron-Distal7.1276521.13329K562TROVE2
chr28560348185603563+intron-Distal3.088733.00129HepG2SUGP2
chr28559292585592958+intron-Distal4.727445.15564HepG2FAM120A
chr28558608385586159+intron-Distal3.974504.06464HepG2CSTF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ELMOD3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ELMOD3 is not available on ENCORE database.

  • 44 RBPs can affect the levels of ELMOD3.  








The Knockdown/knockout RNA-Seq assay for ELMOD3 is not available on ENCORE database.





44 RBPs can affect the gene expression of ELMOD3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ELMOD3ENSG00000115459.13586.78190411.549200.511702.938801.96650HepG2ABCF1
ELMOD3ENSG00000115459.13436.43330238.556000.871307.335006.41620HepG2BOP1
ELMOD3ENSG00000115459.13440.36100323.767400.443602.301901.59220HepG2CIRBP
ELMOD3ENSG00000115459.13300.36620219.003500.455701.924501.34000HepG2CPSF6
ELMOD3ENSG00000115459.13613.31440288.924901.0858013.3427011.99090HepG2DDX21
ELMOD3ENSG00000115459.13465.79900324.447800.521604.174303.37650HepG2DKC1
ELMOD3ENSG00000115459.13364.50640291.116800.324201.979901.41130HepG2DNAJC2
ELMOD3ENSG00000115459.13451.12410325.792700.469502.403001.84910HepG2EIF2S1
ELMOD3ENSG00000115459.13632.98560360.014700.814006.703005.70610HepG2EIF4A3
ELMOD3ENSG00000115459.13667.97150550.371300.279301.931301.40960HepG2ETF1
ELMOD3ENSG00000115459.13510.56110357.806900.512803.063502.12600HepG2G3BP2
ELMOD3ENSG00000115459.13484.38040296.505400.708005.525904.65620HepG2HNRNPA1
ELMOD3ENSG00000115459.13543.13310329.813600.719605.850704.87080HepG2HNRNPC
ELMOD3ENSG00000115459.13474.36500351.701000.431502.763702.04010HepG2IGF2BP1
ELMOD3ENSG00000115459.13567.61850363.441100.643104.487803.65680HepG2MAGOH
ELMOD3ENSG00000115459.13371.24430501.04580-0.432602.638901.98350HepG2PUM2
ELMOD3ENSG00000115459.13482.85650345.414900.483204.141003.41400HepG2PUS1
ELMOD3ENSG00000115459.13272.20690409.01090-0.587403.626402.48440HepG2RBM27
ELMOD3ENSG00000115459.13226.32520332.13560-0.553402.705801.65920HepG2RCC2
ELMOD3ENSG00000115459.13519.92490381.732100.445603.019002.45830HepG2NELFE
ELMOD3ENSG00000115459.13595.50220384.772400.630004.849103.97840HepG2RPLP0
ELMOD3ENSG00000115459.13137.75770234.48580-0.767403.768002.95630HepG2SF3B1
ELMOD3ENSG00000115459.13426.65170307.520300.472302.164501.32790HepG2SMNDC1
ELMOD3ENSG00000115459.13172.07860260.90870-0.600502.062501.39230HepG2SNRNP70
ELMOD3ENSG00000115459.13428.48270519.56740-0.278101.821001.38870HepG2SRFBP1
ELMOD3ENSG00000115459.13296.86230466.39400-0.651805.701704.84950HepG2SRSF5
ELMOD3ENSG00000115459.13215.02480303.24410-0.496003.146802.56580HepG2SRSF9
ELMOD3ENSG00000115459.13569.08760451.112400.335102.575202.07510HepG2SSB
ELMOD3ENSG00000115459.13311.16920482.55690-0.633003.618502.08430HepG2SUGP2
ELMOD3ENSG00000115459.13228.24390306.28440-0.424301.917701.33990HepG2SUPV3L1
ELMOD3ENSG00000115459.13154.52510230.93950-0.579702.457601.76860HepG2TARDBP
ELMOD3ENSG00000115459.13174.37500355.50110-1.027707.844306.79050HepG2U2AF1
ELMOD3ENSG00000115459.1396.67440208.09640-1.106002.545001.59980HepG2U2AF2
ELMOD3ENSG00000115459.13555.67570388.250000.517203.289702.70850HepG2ZNF622
ELMOD3ENSG00000115459.13287.33560455.08220-0.663405.080404.18390K562AKAP8L
ELMOD3ENSG00000115459.13522.55070379.997000.459502.348301.80140K562AQR
ELMOD3ENSG00000115459.13366.17480227.456200.686804.611503.55130K562EIF4A3
ELMOD3ENSG00000115459.13520.31700402.872700.369002.010901.36070K562GRSF1
ELMOD3ENSG00000115459.13662.94720231.541201.5175021.3306019.75110K562HNRNPC
ELMOD3ENSG00000115459.13296.20790207.308400.514702.294801.45060K562HNRNPM
ELMOD3ENSG00000115459.13459.13480341.657900.426302.421301.67330K562HSPD1
ELMOD3ENSG00000115459.13364.86250265.517900.458402.883502.05830K562MTPAP
ELMOD3ENSG00000115459.13341.51230451.36490-0.402402.109201.62250K562PUS1
ELMOD3ENSG00000115459.13301.16670439.74710-0.546104.042503.34200K562RBM15
ELMOD3ENSG00000115459.13139.86440229.12580-0.712102.823701.48220K562RRP9
ELMOD3ENSG00000115459.13121.62480186.38690-0.615902.292701.30950K562U2AF1
ELMOD3ENSG00000115459.13110.32800192.49760-0.803004.264503.27170K562U2AF2
ELMOD3ENSG00000115459.13435.00560312.825200.475603.556302.74940K562UPF1
ELMOD3ENSG00000115459.13382.84470278.338800.459802.970502.09370K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ELMOD3 is not available on ENCORE database.





14 RBPs can affect the splicing of ELMOD3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEELMOD3ENSG00000115459.13chr2+855902198559028985589308855893838559580885595877-0.689000.000040.00132excludedK562SF3B4
SEELMOD3ENSG00000115459.13chr2+855821988558229385581875855819528558267785582839-0.808000.000000.00001excludedHepG2U2AF2
SEELMOD3ENSG00000115459.13chr2+8559021985590289855893088558938385595808855958770.296000.000480.03474includedHepG2AKAP1
SEELMOD3ENSG00000115459.13chr2+855902198559028985589308855893838559580885595877-0.273000.004370.08382excludedK562AGGF1
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.292000.013410.07240includedK562PUS1
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.263000.000210.00731includedHepG2SRSF1
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.258000.009280.07267includedK562AKAP8L
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.220000.000030.00127includedHepG2G3BP1
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.414000.000280.00542includedK562U2AF2
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.348000.000000.00009includedHepG2NCBP2
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.338000.000010.00031includedHepG2HNRNPK
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.290000.000440.02221includedHepG2XRN2
RIELMOD3ENSG00000115459.13chr2+8561726085618871856172608561738885617882856188710.218000.000370.03002includedHepG2SSB
MXEELMOD3ENSG00000115459.13chr2+85582677855828398558408985584375855821988558229385589308855893830.437000.000040.003501includedK562HNRNPU
MXEELMOD3ENSG00000115459.13chr2+85604466856045978561422085614348855982088559833285616873856169500.235000.001690.072801includedHepG2DDX6

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ELMOD3 is not avaliable on ENCORE database.