SLC26A5

General Information

Gene Name       : SLC26A5
Gene ID             : ENSG00000170615.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC26A5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC26A5ENSG00000170615.140.030.020.03ENCSR000AEF
HepG2SLC26A5ENSG00000170615.140.000.070.04ENCSR985KAT
K562SLC26A5ENSG00000170615.140.000.020.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC26A5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC26A5 RNA is bound by 11 proteins.  







eCLIP assay for SLC26A5 is not avaliable on ENCORE database.





11 proteins are bound to SLC26A5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7103075437103075444-intron-Distal4.3427945.10692K562TIA1
chr7103029408103029415-intron-Distal,intron-Proximal5.7814213.46661K562LIN28B
chr7103029412103029425-intron-Distal,intron-Proximal5.3018710.27647K562GNL3
chr7103029414103029424-intron-Distal,intron-Proximal7.5736517.95219K562PABPC4
chr7103075448103075468-intron-Distal6.8922514.99835HepG2TROVE2
chr7103029420103029424-intron-Distal,intron-Proximal5.7814213.46661K562LIN28B
chr7103075451103075466-intron-Distal4.3532645.53855K562TIA1
chr7103075444103075451-intron-Distal4.3532645.53855K562TIA1
chr7103075439103075469-intron-Distal4.521034.07072K562UCHL5
chr7103075439103075447-intron-Distal5.6760625.95692K562IGF2BP1
chr7103029404103029414-intron-Distal,intron-Proximal7.5736517.95219K562PABPC4
chr7103029405103029425-intron-Distal,intron-Proximal4.613334.28284K562RBM22
chr7103075438103075471-intron-Distal5.006917.64008K562YBX3
chr7103029405103029414-intron-Distal,intron-Proximal6.636956.80719K562WRN
chr7103075435103075475-intron-Distal7.04072400.00000K562TROVE2
chr7103029414103029425-intron-Distal,intron-Proximal6.636956.80719K562WRN
chr7103029414103029425-intron-Distal,intron-Proximal4.7934411.10608K562NPM1
chr7103029406103029409-intron-Distal,intron-Proximal4.7934411.10608K562NPM1
chr7103075447103075468-intron-Distal5.6760625.95692K562IGF2BP1
chr7103075436103075448-intron-Distal6.8922514.99835HepG2TROVE2
chr7103073901103073946-intron-Distal5.965259.65659K562TROVE2
chr7103029406103029412-intron-Distal,intron-Proximal5.3018710.27647K562GNL3
chr7103029405103029408-intron-Distal,intron-Proximal5.7814213.46661K562LIN28B
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC26A5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC26A5 is not available on ENCORE database.

  • 1 RBPs can affect the levels of SLC26A5.  








The Knockdown/knockout RNA-Seq assay for SLC26A5 is not available on ENCORE database.





1 RBPs can affect the gene expression of SLC26A5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC26A5ENSG00000170615.1012.221700.935903.706902.741402.23020HepG2SSB
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC26A5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SLC26A5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SLC26A5 is not avaliable on ENCORE database.