GNL3

General Information

Gene Name       : GNL3
Gene ID             : ENSG00000163938.16
Essential Gene : Yes

Functions

Localization(RBPImage: GNL3)

Domains (AlphaFold: GNL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GNL3ENSG00000163938.16302.40250.66276.53ENCSR000AEF
HepG2GNL3ENSG00000163938.16106.43205.32155.88ENCSR985KAT
K562GNL3ENSG00000163938.16172.45193.18182.81ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 358ENCSR301UQMGNL3K562ReleasedENCAB664GBPENCSR977GTT  
knockdown followed by RNA-seq GNL3-BGKcLV08-K562ENCSR455VFLGNL3K562ReleasedENCSR015KGT   CRISPRKD% = 90.8,96.9
knockdown followed by RNA-seq GNL3-BGHcLV05-HepG2ENCSR940FINGNL3HepG2ReleasedENCSR713OTF   CRISPRKD% = 100.0,100.0






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
GNL3358K562ENCSR301UQMENCSR977GTTENCAB664GBPA300-599A1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
GNL3ENCAB664GBPA300-599A1Released, ENCODE3BGHcLV05-19, Released, ENCODE3BGKcLV08-93, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
GNL3K562shRNABGKLV32-31,BGKLV32-32BGKLV32-1,BGKLV32-2NotSatisfiedENCODE3
GNL3HepG2shRNABGHLV16-31,BGHLV16-32BGHLV16-1,BGHLV16-2NotSatisfiedENCODE3
GNL3HepG2shRNABGHLV17-17,BGHLV17-18BGHLV17-1,BGHLV17-2NotSatisfiedENCODE3
GNL3HepG2shRNABGHLV20-29,BGHLV20-30BGHLV20-1,BGHLV20-2redo transfection,redo transfectionNotSatisfiedENCODE3
GNL3HepG2shRNABGHLV26-17,BGHLV26-18BGHLV26-1,BGHLV26-2redo transfection,redo transfectionNotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-15,BGKcLV04-16BGKcLV04-1,BGKcLV04-2no clear band,NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-15-D12,BGKcLV04-16-D12BGKcLV04-1,BGKcLV04-2no clear band,NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-16-D12,BGKcLV04-15-D20BGKcLV04-1,BGKcLV04-2,no clear bandNotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-15-D20,BGKcLV04-16-D20BGKcLV04-1,BGKcLV04-2no clear band,NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-16-D20,BGKcLV04-15-D30BGKcLV04-1,BGKcLV04-2,0.0NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-15-D30,BGKcLV04-16-D30BGKcLV04-1,BGKcLV04-20.0,0.0NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV04-16-D30,BGKcLV08-39BGKcLV04-1,BGKcLV04-20.0,84.9NotSatisfiedENCODE3
GNL3K562CRISPRBGKcLV08-39,BGKcLV08-40BGKcLV08-1,BGKcLV08-284.9,85.1NotSatisfiedENCODE4
GNL3K562CRISPRENCSR455VFLENCSR015KGTGNL3-BGKcLV08-93,GNL3-BGKcLV08-94NT-BGKcLV08-1,NT-BGKcLV08-290.8,96.9ReleasedENCODE4
GNL3HepG2CRISPRENCSR940FINENCSR713OTFGNL3-BGHcLV05-19E,GNL3-BGHcLV05-20ENT-BGHcLV05-1E,NT-BGHcLV05-2E100.0,100.0ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    GNL3: Click to RBP Image Database
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    GNL3Product_ID: A300-599A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: GNL3-human    		 GNL3-HEPG2-CRISPR.png<br>Caption: Western blot following CRISPR against GNL3 in HepG2 whole cell lysate using GNL3 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against GNL3. GNL3 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    		 K562_Bethyl_A300-599A_1_GNL3.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using GNL3 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-GNL3 antibody (lanes under 'GNL3').
    		 GNL3-K562-CRISPR.png<br>Caption: Western blot following CRISPR against GNL3 in K562 whole cell lysate using GNL3 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against GNL3.GNL3 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








    RNA Targets
    • GNL3 protein binds to 26 RNA regions.  





    Proteins bound to RNA
    • GNL3 RNA is bound by 35 proteins.  






    GNL3 protein has 26 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 26 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    GNL3chr62779221427792255+3.858218.31421K562HIST1H4J3'-UTR
    GNL3chr48381700483817069-3.0860515.38251K562SEC31A, THAP9-AS1intron-Distal,intron-Proximal
    GNL3chr7103029412103029425-5.3018710.27647K562SLC26A5intron-Distal,intron-Proximal
    GNL3chr9139565114139565128+4.512276.78511K562EGFL7intron-Distal
    GNL3chr139200332592003347+5.6130910.55661K562MIR17HGintron-Distal
    GNL3chr10128256376128256388-5.4807616.06251K562C10orf90intron-Distal
    GNL3chr1173835454173835473-3.7013529.66015K562GAS5intron-Distal
    GNL3chr3193373566193373576+4.8157624.10216K562OPA1intron-Distal
    GNL3chr10128256367128256376-5.4807616.06251K562C10orf90intron-Distal
    GNL3chrM99529978+3.1765133.28662K562MT-CO3CDS
    GNL3chr11106689680106689688-5.754987.18149K562GUCY1A2intron-Distal
    GNL3chr126923644669236454-5.115497.87510K562CPM, RP11-611O2.5intron-Distal
    GNL3chr157422266174222672+3.375529.98301K562LOXL1intron-Distal
    GNL3chr124841649348416508+6.162058.60773K562RP1-228P16.4intron-Distal
    GNL3chr62786047827860519-3.798529.51494K562HIST1H3J, HIST1H2AM3'-UTR,intron-Distal
    GNL3chr139200319092003215+5.3388712.82783K562MIR17HGintron-Distal
    GNL3chr14102706657102706660-4.565733.56259K562MOKintron-Distal
    GNL3chr143295428532954327+4.337307.34535K562AKAP6intron-Distal
    GNL3chr157422265374222661+3.375529.98301K562LOXL1intron-Distal
    GNL3chr63195827931958284+6.304757.96631K562C4Aintron-Distal
    GNL3chr3193373576193373588+4.8157624.10216K562OPA1intron-Distal
    GNL3chr9139565103139565114+4.512276.78511K562EGFL7intron-Distal
    GNL3chr124841648948416493+6.162058.60773K562RP1-228P16.4intron-Distal
    GNL3chr11106689667106689680-5.754987.18149K562GUCY1A2intron-Distal
    GNL3chr7103029406103029412-5.3018710.27647K562SLC26A5intron-Distal,intron-Proximal
    GNL3chr1173835444173835454-4.3987819.84626K562GAS5intron-Distal




    35 proteins are bound to GNL3 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr35272322152723300+3'-UTR,CDS,intron-Proximal4.7722814.29804K562EFTUD2
    chr35272309152723196+3'-UTR,CDS3.6834525.56111HepG2PPIG
    chr35272306352723105+3'-UTR,CDS,intron-Proximal3.595435.02403K562SF3B4
    chr35272313652723182+3'-UTR,CDS3.014473.06300HepG2UCHL5
    chr35272310152723140+3'-UTR,CDS3.508154.04629HepG2G3BP1
    chr35272310252723168+3'-UTR,CDS3.6928721.18405HepG2BCLAF1
    chr35272321352723314+3'-UTR,CDS,intron-Proximal4.243404.84254HepG2TIA1
    chr35272322052723314+3'-UTR,CDS,intron-Proximal3.556437.92191K562TIA1
    chr35272464752724709+3'-UTR,CDS3.9290633.60922HepG2BCLAF1
    chr35272470852724719+3'-UTR,CDS3.033804.19577K562UCHL5
    chr35272468952724720+3'-UTR,CDS3.422463.06106HepG2TRA2A
    chr35272078252720796+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.770925.82148K562DDX3X
    chr35272310452723185+3'-UTR,CDS4.5515719.21709HepG2GRWD1
    chr35272316852723190+3'-UTR,CDS3.943339.74534HepG2BCLAF1
    chr35272464752724705+3'-UTR,CDS3.0763312.36738K562ZNF622
    chr35272470952724720+3'-UTR,CDS4.1072010.35753HepG2BCLAF1
    chr35272012052720163+5'-UTR,CDS,intron-Distal,intron-Proximal5.9276512.15317HepG2PRPF8
    chr35272004652720124+5'-UTR,CDS,intron-Distal,intron-Proximal3.052514.24836K562DDX3X
    chr35272805852728112+CDS3.1398410.93472K562ZNF622
    chr35272500252725072+CDS3.9546510.48558K562ZNF622
    chr35272212452722168+CDS,intron-Proximal4.1313322.18737HepG2BCLAF1
    chr35272500952725081+CDS3.388767.26922HepG2GRWD1
    chr35272496052724972+CDS,intron-Proximal3.981208.82687K562UCHL5
    chr35272206852722163+CDS,intron-Proximal3.3022312.40487K562SF3B4
    chr35272804252728131+CDS,intron-Proximal3.275094.29829K562U2AF2
    chr35272720352727228+CDS3.300605.96568HepG2GRWD1
    chr35272773252727791+CDS4.002794.14811HepG2FXR2
    chr35272780452727823+CDS5.4384419.29311HepG2BCLAF1
    chr35272496052724996+CDS,intron-Proximal5.6271212.32249K562ZNF622
    chr35272706052727106+CDS,intron-Proximal3.521565.11990K562AQR
    chr35272768852727746+CDS3.4651711.49943K562UCHL5
    chr35272210752722191+CDS,intron-Proximal4.692606.81110K562U2AF2
    chr35272497252725003+CDS3.097848.62157K562UCHL5
    chr35272506952725123+CDS,intron-Proximal4.404845.73990HepG2PRPF8
    chr35272805952728084+CDS5.234328.32768HepG2GRWD1
    chr35272158552721632+CDS,intron-Proximal4.7806125.32118HepG2BCLAF1
    chr35272780452727858+CDS,intron-Proximal4.5038610.86325HepG2PRPF8
    chr35272499952725084+CDS3.3536318.47214HepG2PPIG
    chr35272805252728062+CDS,intron-Proximal3.082256.00978HepG2PPIG
    chr35272748152727549+CDS3.8421232.92154HepG2BCLAF1
    chr35272805452728119+CDS3.8166519.50833K562UCHL5
    chr35272562452725674+CDS,intron-Proximal3.555273.67792HepG2PRPF8
    chr35272209852722166+CDS,intron-Proximal3.1385211.63358HepG2BUD13
    chr35272561052725645+CDS3.7893015.79153HepG2BCLAF1
    chr35272210952722152+CDS,intron-Proximal3.148435.67321K562GPKOW
    chr35272772752727793+CDS4.1921420.71566HepG2BCLAF1
    chr35272148552721571+CDS,intron-Proximal3.3785119.70763HepG2AQR
    chr35272779952727824+CDS,intron-Proximal3.192304.70101K562PUM1
    chr35272163152721675+CDS,intron-Proximal3.738635.34337K562AQR
    chr35272212452722192+CDS,intron-Proximal3.443486.57251HepG2ZNF800
    chr35272495952724969+CDS,intron-Proximal3.5582713.92500HepG2BCLAF1
    chr35272212452722157+CDS,intron-Proximal3.660439.66555K562UCHL5
    chr35272805252728066+CDS,intron-Proximal3.8693812.56108HepG2BCLAF1
    chr35272496952725011+CDS3.7486822.78415HepG2BCLAF1
    chr35272741052727457+CDS,intron-Proximal3.060638.20720HepG2EFTUD2
    chr35272210652722179+CDS,intron-Proximal3.9392816.25568HepG2U2AF2
    chr35272159452721632+CDS,intron-Proximal3.5844411.84285K562UCHL5
    chr35272809052728117+CDS3.8881111.10779HepG2BCLAF1
    chr35272769052727717+CDS3.857616.62597HepG2GRWD1
    chr35272775852727817+CDS3.413319.04720K562ZNF622
    chr35272725552727287+CDS3.2701610.40328HepG2BCLAF1
    chr35272495852724999+CDS,intron-Proximal3.2292112.40795HepG2PPIG
    chr35272774652727823+CDS5.3234327.74855K562UCHL5
    chr35272703352727061+CDS3.666558.76261HepG2GRWD1
    chr35272808452728117+CDS4.351558.80691HepG2GRWD1
    chr35272688952726904+CDS3.033789.11678HepG2BCLAF1
    chr35272154952721582+CDS4.0111011.29515HepG2BCLAF1
    chr35272501352725081+CDS4.2458022.59489HepG2BCLAF1
    chr35272773852727823+CDS3.557786.29795HepG2TRA2A
    chr35272295852722970+intron-Distal,intron-Proximal4.4579513.35427K562SMNDC1
    chr35272542352725462+intron-Distal,intron-Proximal4.905345.97506K562NIPBL
    chr35272292852722967+intron-Distal,intron-Proximal5.474075.03841K562AATF
    chr35272676052726826+intron-Distal,intron-Proximal3.1814121.56729HepG2LARP7
    chr35272348652723561+intron-Distal5.264419.55253K562LIN28B
    chr35272267752722791+intron-Distal4.079304.12666HepG2HNRNPK
    chr35272544552725462+intron-Distal,intron-Proximal7.44975400.00000HepG2NOLC1
    chr35272543952725445+intron-Distal7.29236400.00000HepG2NOLC1
    chr35272675652726797+intron-Distal,intron-Proximal3.0843464.61429HepG2NOLC1
    chr35272539552725439+intron-Distal7.10250400.00000HepG2NOLC1
    chr35272293452722966+intron-Distal4.7354422.98309HepG2DKC1
    chr35272540552725460+intron-Distal,intron-Proximal4.697237.81316HepG2LARP7
    chr35272542952725459+intron-Distal,intron-Proximal4.064383.49003K562PRPF8
    chr35272085752720875+intron-Distal,intron-Proximal4.288114.21433K562PRPF8
    chr35272477652724838+intron-Distal,intron-Proximal3.334737.88181K562HNRNPUL1
    chr35272542552725458+intron-Distal3.9115725.48331K562SF3B4
    chr35272168452721775+intron-Distal,intron-Proximal3.1132310.27931K562PRPF8
    chr35272477052724837+intron-Distal,intron-Proximal4.026563.41065K562ZC3H8
    chr35272290852722974+intron-Distal,intron-Proximal6.16122400.00000HepG2NOLC1
    chr35272542552725459+intron-Distal,intron-Proximal3.967635.45203K562TRA2A
    chr35272478452724829+intron-Distal,intron-Proximal5.4863966.75676HepG2NOLC1
    chr35272084952720874+intron-Distal,intron-Proximal4.215043.59236HepG2AQR
    chr35272542652725463+intron-Distal,intron-Proximal4.9548312.88307K562RBM15
    chr35272477952724835+intron-Distal,intron-Proximal3.8767421.13684HepG2DKC1
    chr35272513552725196+intron-Distal,intron-Proximal3.295497.78008K562PRPF8
    chr35272539752725463+intron-Distal,intron-Proximal4.3368530.13454K562PTBP1
    chr35272478252724837+intron-Distal,intron-Proximal3.418328.96585K562AATF
    chr35272167552721754+intron-Distal,intron-Proximal3.9161112.85462K562AQR
    chr35272542552725445+intron-Distal3.9768552.60359K562SMNDC1
    chr35272539652725461+intron-Distal,intron-Proximal4.4333844.14173K562AATF
    chr35272544552725459+intron-Distal,intron-Proximal3.9349252.37072K562SMNDC1
    chr35272539452725462+intron-Distal,intron-Proximal4.66919400.00000HepG2DKC1
    chr35272539052725461+intron-Distal,intron-Proximal4.563563.41065K562ZC3H8
    chr35272291952722970+intron-Distal,intron-Proximal3.609347.95335HepG2DDX52
    chr35272511652725188+intron-Distal,intron-Proximal3.625975.41500HepG2TIAL1
    chr35272477252724839+intron-Distal,intron-Proximal4.8950811.94954K562PTBP1
    chr35272480752724836+intron-Distal,intron-Proximal3.5227212.36622K562SMNDC1
    chr35272706452727097+intron-Proximal4.528434.62947HepG2AQR
    chr35272168152721719+intron-Proximal3.360283.64175HepG2AGGF1
    chr35272782852727867+intron-Proximal4.721835.17615K562AQR
    chr35272168352721720+intron-Proximal4.154165.26108K562SF3B4
    chr35272679852726811+intron-Proximal3.5108171.78023HepG2NOLC1
    chr35272166552721722+intron-Proximal3.476936.93588K562GPKOW
    chr35272510652725177+intron-Proximal3.234827.65545K562AQR
    chr35272168452721718+intron-Proximal3.721096.78376HepG2EFTUD2
    chr35272324952723293+intron-Proximal4.457554.24247HepG2CDC40
    chr35272511352725183+intron-Proximal3.366789.10893HepG2CDC40
    chr35272168252721727+intron-Proximal5.0857311.56048K562EFTUD2
    chr35272168352721711+intron-Proximal3.648069.70941HepG2PRPF8
    chr35272323852723278+intron-Proximal4.130257.13970HepG2PRPF8
    chr35272323452723297+intron-Proximal3.947075.63582HepG2TIAL1
    chr35272168552721707+intron-Proximal3.401118.16183HepG2BCLAF1
    chr35272322652723298+intron-Proximal4.5181714.02136K562PRPF8
    chr35272168352721728+intron-Proximal4.9542615.17760HepG2BUD13
    chr35272512952725180+intron-Proximal3.8363910.15155K562EFTUD2
    chr35272322952723284+intron-Proximal4.3620812.28583HepG2EFTUD2
    chr35272140252721465+intron-Proximal4.503987.96024HepG2AQR
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein GNL3 and its RNA.



    Diffrential Expression

    • The Knockdown/knockout assay for GNL3 is not available on ENCORE database.

    • 126 RBPs can affect the levels of GNL3.  








    The Knockdown/knockout RNA-Seq assay for GNL3 is not available on ENCORE database.





    126 RBPs can affect the gene expression of GNL3 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    GNL3ENSG00000163938.122157.465302508.45430-0.217502.854102.23840HepG2ACO1
    GNL3ENSG00000163938.121674.170202090.29790-0.320302.430501.49440HepG2ADAR
    GNL3ENSG00000163938.121911.360002478.83190-0.375102.602701.59450HepG2AKAP8
    GNL3ENSG00000163938.121952.454302520.19470-0.368206.191905.08790HepG2AKAP8L
    GNL3ENSG00000163938.122497.925603116.49810-0.319202.352001.62460HepG2ASCC1
    GNL3ENSG00000163938.123097.203904201.04270-0.4398010.408709.21760HepG2AUH
    GNL3ENSG00000163938.121288.406202306.30710-0.840008.260806.81440HepG2BCLAF1
    GNL3ENSG00000163938.122205.517302853.05210-0.371403.673602.99500HepG2BOP1
    GNL3ENSG00000163938.121871.980202406.05600-0.362103.395502.04010HepG2BUD13
    GNL3ENSG00000163938.122149.933104289.78790-0.996607.749906.10180HepG2CCAR1
    GNL3ENSG00000163938.121828.327902960.87900-0.695509.280407.93540HepG2CIRBP
    GNL3ENSG00000163938.121666.478102452.45170-0.557403.389502.53610HepG2CNOT7
    GNL3ENSG00000163938.122076.634802619.23460-0.334902.827202.13360HepG2CPSF6
    GNL3ENSG00000163938.123087.049103982.53670-0.367509.274608.04380HepG2DAZAP1
    GNL3ENSG00000163938.121422.486102146.58150-0.5936011.502809.39780HepG2DDX1
    GNL3ENSG00000163938.121245.735502379.33330-0.9336011.5697010.29360HepG2DDX21
    GNL3ENSG00000163938.121743.154303608.08990-1.0495018.9863017.50360HepG2DDX3X
    GNL3ENSG00000163938.121714.232502609.22950-0.606104.970603.97110HepG2DDX55
    GNL3ENSG00000163938.122376.574903099.28780-0.383102.817002.19420HepG2DDX6
    GNL3ENSG00000163938.121603.637302030.11960-0.340203.062302.03570HepG2DHX30
    GNL3ENSG00000163938.121669.244402399.89700-0.5238011.3187010.14170HepG2DKC1
    GNL3ENSG00000163938.121435.901402104.86080-0.5518010.502409.20260HepG2DNAJC21
    GNL3ENSG00000163938.121481.073002086.20100-0.4942012.2304010.96350HepG2DNAJC2
    GNL3ENSG00000163938.121786.391802524.82590-0.499105.056903.84490HepG2EEF2
    GNL3ENSG00000163938.121652.518802979.55560-0.8504012.6940011.48490HepG2EIF2S1
    GNL3ENSG00000163938.121475.071902049.66080-0.474603.899002.83660HepG2EIF3D
    GNL3ENSG00000163938.122008.870903292.82440-0.712908.052306.96440HepG2EIF4A3
    GNL3ENSG00000163938.122904.495804823.47680-0.7318026.6099025.06900HepG2ETF1
    GNL3ENSG00000163938.122406.552103242.27320-0.430003.234002.40750HepG2FIP1L1
    GNL3ENSG00000163938.122240.318701838.938300.284702.552301.79620HepG2FUBP3
    GNL3ENSG00000163938.122273.000303006.12990-0.403302.356601.32220HepG2FUS
    GNL3ENSG00000163938.122410.207903322.12430-0.462904.512303.64370HepG2FXR1
    GNL3ENSG00000163938.121758.822203081.86130-0.8092010.822109.55100HepG2G3BP1
    GNL3ENSG00000163938.122630.930803271.65510-0.314402.387601.56250HepG2G3BP2
    GNL3ENSG00000163938.121212.528901824.97740-0.589906.411705.05090HepG2GEMIN5
    GNL3ENSG00000163938.121345.960202294.99130-0.769909.360407.44750HepG2GNB2L1
    GNL3ENSG00000163938.121545.785302969.04440-0.9417014.3115012.96510HepG2GPKOW
    GNL3ENSG00000163938.121101.760602125.02520-0.9477018.8504017.40920HepG2HNRNPA1
    GNL3ENSG00000163938.121238.159302363.67330-0.9328018.3391016.72250HepG2HNRNPC
    GNL3ENSG00000163938.122725.709603298.83700-0.275303.580502.77300HepG2HNRNPF
    GNL3ENSG00000163938.124033.077603120.421200.370003.649002.85550HepG2HNRNPK
    GNL3ENSG00000163938.122998.811903627.77030-0.274705.562804.63580HepG2HNRNPL
    GNL3ENSG00000163938.121135.323602833.41940-1.3194030.3227028.60210HepG2HNRNPLL
    GNL3ENSG00000163938.121754.768302348.04790-0.420208.052507.05840HepG2HNRNPU
    GNL3ENSG00000163938.122338.463103248.41840-0.474207.143406.02820HepG2IGF2BP1
    GNL3ENSG00000163938.122069.906503132.68170-0.597806.956805.93420HepG2IGF2BP2
    GNL3ENSG00000163938.121685.902802398.45740-0.5086014.4092012.88440HepG2ILF2
    GNL3ENSG00000163938.122942.990304527.25210-0.621404.419403.36190HepG2LARP4
    GNL3ENSG00000163938.121358.235901904.02920-0.487304.458602.45430HepG2MARK2
    GNL3ENSG00000163938.122082.628902624.57830-0.333703.163602.30120HepG2MSI2
    GNL3ENSG00000163938.121771.187402889.85520-0.706305.697504.28150HepG2MTPAP
    GNL3ENSG00000163938.121953.728203420.66230-0.8080011.191109.96020HepG2NCBP2
    GNL3ENSG00000163938.123408.201103949.07800-0.212502.104901.43720HepG2NOL12
    GNL3ENSG00000163938.121999.858102512.41320-0.329202.802802.04940HepG2NSUN2
    GNL3ENSG00000163938.122427.898103046.44290-0.327402.363601.69180HepG2PABPC4
    GNL3ENSG00000163938.121251.165101695.00670-0.438005.486003.77180HepG2PKM
    GNL3ENSG00000163938.121652.783302094.27540-0.341604.423003.51090HepG2PPIL4
    GNL3ENSG00000163938.121234.875002013.52360-0.705406.366905.19570HepG2PRPF8
    GNL3ENSG00000163938.122058.972303127.90820-0.6033015.3521014.26420HepG2PTBP1
    GNL3ENSG00000163938.121985.425403769.75500-0.9250021.9063020.44240HepG2PUF60
    GNL3ENSG00000163938.123137.924004001.77810-0.350809.142208.19630HepG2PUM1
    GNL3ENSG00000163938.123164.121003998.84460-0.337804.351203.51980HepG2PUM2
    GNL3ENSG00000163938.121385.156202555.01550-0.8833034.5639032.84130HepG2PUS1
    GNL3ENSG00000163938.122608.314103387.38970-0.377105.409904.57860HepG2QKI
    GNL3ENSG00000163938.123541.612804031.50950-0.186902.070901.60530HepG2RBM22
    GNL3ENSG00000163938.122480.960503074.35400-0.309403.076302.36950HepG2RBM25
    GNL3ENSG00000163938.121512.553602201.33000-0.541404.956503.52850HepG2RCC2
    GNL3ENSG00000163938.122064.005503480.97880-0.7540024.7903023.49310HepG2NELFE
    GNL3ENSG00000163938.122532.660503242.20870-0.356306.422805.53860HepG2RECQL
    GNL3ENSG00000163938.122377.372203553.57030-0.579908.445207.35220HepG2RPLP0
    GNL3ENSG00000163938.121839.073902697.53950-0.552703.594402.51870HepG2RPS10
    GNL3ENSG00000163938.121313.806101994.35480-0.602208.765507.74480HepG2RPS19
    GNL3ENSG00000163938.121821.782902500.20900-0.456704.355103.36120HepG2RPS2
    GNL3ENSG00000163938.121694.352602462.08870-0.539103.981403.02130HepG2RPS3A
    GNL3ENSG00000163938.122584.317903256.37770-0.333505.657004.86230HepG2SF3B4
    GNL3ENSG00000163938.123017.539403614.64170-0.260504.844803.95710HepG2SLBP
    GNL3ENSG00000163938.121893.527402438.54750-0.364908.108107.09760HepG2SMN1
    GNL3ENSG00000163938.122320.394303120.49940-0.427402.347701.63090HepG2SNRNP70
    GNL3ENSG00000163938.123788.461404553.39830-0.265304.788904.18150HepG2SRFBP1
    GNL3ENSG00000163938.122952.857803399.02620-0.203002.643602.17830HepG2SRSF1
    GNL3ENSG00000163938.122775.755403722.10390-0.423209.227408.17350HepG2SRSF5
    GNL3ENSG00000163938.122465.261703240.97860-0.394707.598706.53890HepG2SRSF7
    GNL3ENSG00000163938.122717.144703953.35210-0.5410016.0267015.00180HepG2SSB
    GNL3ENSG00000163938.123343.148304233.04050-0.340507.937006.97350HepG2SUCLG1
    GNL3ENSG00000163938.121073.427602597.65480-1.2750013.4730012.16530HepG2SUPV3L1
    GNL3ENSG00000163938.121808.561602761.87120-0.610808.344407.17640HepG2TARDBP
    GNL3ENSG00000163938.121238.885201741.24310-0.491103.681302.55140HepG2TFIP11
    GNL3ENSG00000163938.121049.235002281.65850-1.1207032.8772031.49850HepG2TIAL1
    GNL3ENSG00000163938.122771.584403682.91830-0.410105.351404.09180HepG2TUFM
    GNL3ENSG00000163938.122026.433704079.13540-1.009303.346602.25850HepG2U2AF2
    GNL3ENSG00000163938.121884.909302799.65640-0.5708015.9436014.53590HepG2UPF1
    GNL3ENSG00000163938.121992.777502557.10000-0.359702.131301.48790HepG2XRN2
    GNL3ENSG00000163938.121372.790502453.34760-0.8376032.8860031.06240HepG2ZC3H8
    GNL3ENSG00000163938.121898.454103079.09010-0.6977029.0715027.78000HepG2ZNF622
    GNL3ENSG00000163938.122951.824102488.416500.246303.364402.75010K562AGGF1
    GNL3ENSG00000163938.123645.664602589.299100.493506.485805.45320K562AKAP8L
    GNL3ENSG00000163938.123470.023802716.777100.352905.244203.94070K562ATP5C1
    GNL3ENSG00000163938.122594.102303277.32570-0.337302.254201.38810K562BCLAF1
    GNL3ENSG00000163938.122727.355703639.92050-0.416404.178603.09970K562BOP1
    GNL3ENSG00000163938.122582.399703870.32640-0.5837010.598409.05040K562CPSF6
    GNL3ENSG00000163938.121745.050902141.16060-0.295102.742501.70490K562DDX3X
    GNL3ENSG00000163938.126128.447505147.712800.251504.181503.40220K562DDX47
    GNL3ENSG00000163938.124028.431902786.340800.5317012.023409.93760K562DKC1
    GNL3ENSG00000163938.123089.943204696.94530-0.604107.453606.35640K562EIF2S2
    GNL3ENSG00000163938.123469.427202581.983700.426107.164905.89610K562EIF3G
    GNL3ENSG00000163938.122578.977803937.87510-0.610608.774507.20880K562FMR1
    GNL3ENSG00000163938.122580.629503337.66520-0.371103.213902.22170K562FTO
    GNL3ENSG00000163938.123590.357802326.300000.6260016.1339014.77990K562FXR1
    GNL3ENSG00000163938.123803.844202899.620900.391502.528701.85800K562G3BP2
    GNL3ENSG00000163938.122977.428803695.24650-0.311602.980002.15620K562GPKOW
    GNL3ENSG00000163938.121473.985002879.57480-0.9661016.9474015.54940K562HNRNPC
    GNL3ENSG00000163938.121981.623802571.12440-0.375703.907202.52470K562HNRNPF
    GNL3ENSG00000163938.125019.602703011.660400.736908.630406.39780K562HNRNPK
    GNL3ENSG00000163938.124680.025803585.177700.384403.119402.12650K562HNRNPM
    GNL3ENSG00000163938.123328.223002747.932300.276302.311401.56570K562KIF1C
    GNL3ENSG00000163938.122039.333802566.89150-0.331903.348601.62040K562LSM11
    GNL3ENSG00000163938.123648.408403078.372900.245002.402401.56410K562MBNL1
    GNL3ENSG00000163938.122960.889703606.95720-0.284802.631001.78120K562METAP2
    GNL3ENSG00000163938.123311.785702157.713000.618002.562601.72030K562NAA15
    GNL3ENSG00000163938.123375.398704108.45530-0.283507.492606.34960K562NSUN2
    GNL3ENSG00000163938.122231.306903329.55450-0.577402.533701.59750K562PABPN1
    GNL3ENSG00000163938.123791.627302819.572700.427205.141003.79840K562PCBP2
    GNL3ENSG00000163938.122234.894103507.00990-0.650007.998006.58490K562PCBP3
    GNL3ENSG00000163938.122141.184102811.09800-0.392703.844202.11700K562PHF6
    GNL3ENSG00000163938.121813.170702690.02780-0.569109.405207.96430K562POLR2G
    GNL3ENSG00000163938.123742.076502597.688000.526506.742505.57190K562PRPF8
    GNL3ENSG00000163938.121780.830702581.74600-0.535804.321703.15370K562PSIP1
    GNL3ENSG00000163938.129566.199508087.580400.242103.213202.06010K562PUM1
    GNL3ENSG00000163938.123814.863302567.953700.570907.158806.33140K562PUS1
    GNL3ENSG00000163938.123101.896902502.018100.310003.949503.25650K562RBM15
    GNL3ENSG00000163938.121179.116302355.05360-0.9981022.1165019.38540K562RCC2
    GNL3ENSG00000163938.123702.804003016.213700.295803.481902.51830K562SF3B4
    GNL3ENSG00000163938.122261.717403714.01770-0.715603.260001.80230K562SFPQ
    GNL3ENSG00000163938.121607.570302232.57500-0.473805.240403.69840K562SRFBP1
    GNL3ENSG00000163938.123572.059004153.19720-0.217503.797202.72000K562SRPK2
    GNL3ENSG00000163938.121575.398902141.23310-0.442702.399601.42910K562SRSF4
    GNL3ENSG00000163938.121687.751202663.35720-0.6581011.239508.68230K562SSB
    GNL3ENSG00000163938.123518.715002698.124200.383005.256104.11480K562SYNCRIP
    GNL3ENSG00000163938.122303.197902946.28280-0.355302.272201.53720K562TIA1
    GNL3ENSG00000163938.121564.927602483.26300-0.666108.024406.36140K562TIAL1
    GNL3ENSG00000163938.122324.813102890.29730-0.314102.397101.39490K562TRA2A
    GNL3ENSG00000163938.122122.171502637.63800-0.313702.586501.67830K562TRIM56
    GNL3ENSG00000163938.124017.210604785.50230-0.252504.149402.59420K562TROVE2
    GNL3ENSG00000163938.123529.718502811.932200.327902.301201.31570K562U2AF1
    GNL3ENSG00000163938.124267.455902903.702600.5554010.590209.01560K562U2AF2
    GNL3ENSG00000163938.121647.027802662.30990-0.692806.367804.74770K562UCHL5
    GNL3ENSG00000163938.123109.016804356.27220-0.4866013.5817012.13440K562UPF1
    GNL3ENSG00000163938.122549.689803727.54090-0.547908.964007.35240K562WDR3
    GNL3ENSG00000163938.124334.949803876.097600.161302.126201.37710K562WDR43
    GNL3ENSG00000163938.125071.189905999.89950-0.242602.083301.34560K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for GNL3 is not available on ENCORE database.





    20 RBPs can affect the splicing of GNL3 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEGNL3ENSG00000163938.12chr3+527207845272102352719935527201215272126152721399-0.067000.000000.00000excludedK562AQR
    A3SSGNL3ENSG00000163938.12chr3+5272076152720843527207845272084352719935527201210.053000.000000.00000longerK562AQR
    A5SSGNL3ENSG00000163938.12chr3+5272212452722222527221245272220852723089527232220.119000.000060.00381longerHepG2U2AF2
    A5SSGNL3ENSG00000163938.12chr3+5272207052722222527220705272220852723089527232220.112000.000800.05880longerHepG2SF3A3
    A5SSGNL3ENSG00000163938.12chr3+5272212452722222527221245272220852723089527232220.109000.000060.02189longerHepG2HNRNPUL1
    RIGNL3ENSG00000163938.12chr3+527246075272508752724607527247205272496052725087-0.065000.000380.02798excludedK562DROSHA
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.200000.000000.00000includedK562PUS1
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.162000.000000.00000includedHepG2SF3A3
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.094000.000060.00471includedK562SF3B1
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.106000.000020.00127includedHepG2UCHL5
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.083000.000010.00188includedHepG2PRPF4
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.145000.000000.00000includedHepG2PRPF8
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.075000.000740.01071includedK562AGGF1
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.051000.000950.02257includedHepG2IGF2BP3
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.087000.000010.00031includedK562RBM22
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.093000.000050.00081includedK562AKAP8L
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.070000.000000.00000includedHepG2TAF15
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.052000.000770.05094includedK562WDR3
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.066000.002310.02578includedK562RBM15
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.131000.000000.00000includedK562U2AF1
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.149000.000000.00000includedK562U2AF2
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.064000.000000.00001includedHepG2SF3B4
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.163000.000000.00000includedHepG2RBM22
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.052000.011300.09737includedK562UTP18
    RIGNL3ENSG00000163938.12chr3+5272460752725087527246075272472052724960527250870.192000.000000.00000includedK562AQR
    MXEGNL3ENSG00000163938.12chr3+5272496052725087527255575272564552724607527247205272688752726945-0.080000.011350.070162includedK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for GNL3 is not avaliable on ENCORE database.