CPM

General Information

Gene Name       : CPM
Gene ID             : ENSG00000135678.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CPM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CPMENSG00000135678.110.180.300.24ENCSR000AEF
HepG2CPMENSG00000135678.110.000.010.01ENCSR985KAT
K562CPMENSG00000135678.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CPM is not avaliable on ENCORE database.



Proteins bound to RNA
  • CPM RNA is bound by 4 proteins.  







eCLIP assay for CPM is not avaliable on ENCORE database.





4 proteins are bound to CPM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr126923642269236432-intron-Distal4.882505.31327HepG2HNRNPM
chr126923642069236422-intron-Distal4.826444.85646HepG2HNRNPM
chr126923644669236454-intron-Distal5.115497.87510K562GNL3
chr126923644369236457-intron-Distal6.314164.90578HepG2HNRNPM
chr126923643269236443-intron-Distal4.882505.31327HepG2HNRNPM
chr126923642669236458-intron-Distal3.2558022.44311HepG2SMNDC1
chr126923641969236426-intron-Distal3.2370722.44311HepG2SMNDC1
chr126923644369236456-intron-Distal5.2359420.31929K562GPKOW
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CPM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CPM is not available on ENCORE database.

  • 17 RBPs can affect the levels of CPM.  








The Knockdown/knockout RNA-Seq assay for CPM is not available on ENCORE database.





17 RBPs can affect the gene expression of CPM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CPMENSG00000135678.766.334901.791205.2106012.8340011.77620HepG2AKAP1
CPMENSG00000135678.755.0820011.832002.218805.510604.06260HepG2AKAP8
CPMENSG00000135678.731.324900.448306.126506.628405.59770HepG2CPSF6
CPMENSG00000135678.735.468100.509106.122508.997707.29880HepG2DDX59
CPMENSG00000135678.729.099301.475104.302005.888105.01620HepG2DDX6
CPMENSG00000135678.712.486501.416303.140102.074301.55300HepG2EIF2S1
CPMENSG00000135678.76.9436034.55250-2.315004.006702.92630HepG2PABPC1
CPMENSG00000135678.79.543400.508304.230802.076601.33430HepG2PARN
CPMENSG00000135678.715.067201.575103.257802.703702.04060HepG2PUM2
CPMENSG00000135678.773.147201.180805.9529018.5199016.63920HepG2RBM15
CPMENSG00000135678.79.642900.320104.912802.231101.60840HepG2RPLP0
CPMENSG00000135678.78.0483037.95910-2.237704.354703.35060HepG2RPS3A
CPMENSG00000135678.720.668403.375002.614402.918002.40760HepG2SRFBP1
CPMENSG00000135678.714.619700.291305.649404.218403.38560HepG2SRSF7
CPMENSG00000135678.773.5865012.981502.502902.864001.50990HepG2SUGP2
CPMENSG00000135678.710.213900.0000099999.999902.562001.76210K562PCBP3
CPMENSG00000135678.79.744300.0000099999.999902.850602.03700K562POLR2G
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CPM is not available on ENCORE database.






No RBPs affect the alternative splcing events of CPM on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CPM is not avaliable on ENCORE database.