AKAP6

General Information

Gene Name       : AKAP6
Gene ID             : ENSG00000151320.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AKAP6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AKAP6ENSG00000151320.101.901.761.83ENCSR000AEF
HepG2AKAP6ENSG00000151320.100.560.440.50ENCSR985KAT
K562AKAP6ENSG00000151320.100.210.280.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AKAP6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AKAP6 RNA is bound by 9 proteins.  







eCLIP assay for AKAP6 is not avaliable on ENCORE database.





9 proteins are bound to AKAP6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr143295426132954326+intron-Distal3.334804.30020K562KHDRBS1
chr143295428332954312+intron-Distal7.90242252.38444HepG2GRSF1
chr143295337032953410+intron-Distal5.368765.36159K562DHX30
chr143295428232954328+intron-Distal4.5057837.72093HepG2DHX30
chr143295431232954328+intron-Distal7.78953230.83576HepG2GRSF1
chr143295428032954322+intron-Distal3.166553.43210K562NCBP2
chr143295428332954328+intron-Distal5.1693140.52333HepG2SUPV3L1
chr143295410332954150+intron-Distal4.725957.25263HepG2DHX30
chr143295428332954294+intron-Distal3.2474512.57125K562SND1
chr143295428332954328+intron-Distal3.277129.42854HepG2FASTKD2
chr143295428332954327+intron-Distal8.6619011.89306K562SUPV3L1
chr143295428432954287+intron-Distal6.1171575.16104K562DHX30
chr143295429432954328+intron-Distal3.4391813.34229K562SND1
chr143295428532954327+intron-Distal4.337307.34535K562GNL3
chr143295426632954283+intron-Distal6.5299826.34109HepG2GRSF1
chr143295428732954327+intron-Distal6.68787400.00000K562DHX30
chr143295428332954326+intron-Distal5.4477332.49513K562TBRG4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AKAP6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AKAP6 is not available on ENCORE database.

  • 41 RBPs can affect the levels of AKAP6.  








The Knockdown/knockout RNA-Seq assay for AKAP6 is not available on ENCORE database.





41 RBPs can affect the gene expression of AKAP6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AKAP6ENSG00000151320.6244.3630066.015601.8880012.9482011.88460HepG2AKAP1
AKAP6ENSG00000151320.687.2710045.941400.925602.869802.08980HepG2AKAP8L
AKAP6ENSG00000151320.637.6111068.57620-0.866601.857201.35880HepG2BOP1
AKAP6ENSG00000151320.6142.0033063.521401.160503.831902.67190HepG2CCAR1
AKAP6ENSG00000151320.6133.4443045.715401.545408.936007.87110HepG2CKAP4
AKAP6ENSG00000151320.695.9396033.765801.506503.375502.52420HepG2CNOT7
AKAP6ENSG00000151320.676.4783042.292700.854502.568401.76230HepG2DDX19B
AKAP6ENSG00000151320.627.1881065.56360-1.269903.259902.52650HepG2DDX21
AKAP6ENSG00000151320.631.5973071.49240-1.178002.603001.65690HepG2DDX59
AKAP6ENSG00000151320.6176.6591057.725401.613609.398908.22870HepG2EIF4A3
AKAP6ENSG00000151320.622.7555056.18940-1.304102.414401.77040HepG2EIF4B
AKAP6ENSG00000151320.694.9336057.445100.724602.117401.36950HepG2EIF4G1
AKAP6ENSG00000151320.628.6048061.88990-1.113402.022301.35810HepG2FIP1L1
AKAP6ENSG00000151320.620.7059071.36820-1.785204.874704.04060HepG2GPKOW
AKAP6ENSG00000151320.698.1263049.416800.989502.754502.06290HepG2HNRNPC
AKAP6ENSG00000151320.6102.7258049.090101.065204.114703.38730HepG2HNRNPU
AKAP6ENSG00000151320.623.3473058.56960-1.326902.675102.05420HepG2MATR3
AKAP6ENSG00000151320.697.2514057.732200.752202.333701.63390HepG2NOL12
AKAP6ENSG00000151320.627.7359060.38970-1.122502.096301.44110HepG2NSUN2
AKAP6ENSG00000151320.66.9314030.88470-2.155702.325301.52510HepG2PABPC1
AKAP6ENSG00000151320.684.2041048.591000.793102.166301.40930HepG2PARN
AKAP6ENSG00000151320.620.7971043.78450-1.074002.021101.38220HepG2PPIL4
AKAP6ENSG00000151320.6141.2402054.384001.376807.002906.21260HepG2PTBP1
AKAP6ENSG00000151320.692.1465055.112500.741502.019601.49870HepG2PUF60
AKAP6ENSG00000151320.6103.1602046.580401.147004.572703.81840HepG2PUS1
AKAP6ENSG00000151320.6174.2423069.865001.318408.331007.54480HepG2RBM22
AKAP6ENSG00000151320.6111.3459060.525400.879302.734102.19530HepG2NELFE
AKAP6ENSG00000151320.685.1736039.868101.095103.182502.52970HepG2RPS19
AKAP6ENSG00000151320.685.4623045.015900.924802.043101.35720HepG2RRP9
AKAP6ENSG00000151320.693.7897056.623400.727901.848901.34920HepG2SF3B4
AKAP6ENSG00000151320.684.6599050.981600.731602.006301.44470HepG2SMN1
AKAP6ENSG00000151320.6157.5018078.917900.996805.333204.70010HepG2SRFBP1
AKAP6ENSG00000151320.6120.8041059.101501.031303.773403.24300HepG2SRSF1
AKAP6ENSG00000151320.6300.4550072.535702.0503017.2138014.61980HepG2SRSF3
AKAP6ENSG00000151320.6134.5040068.533400.972704.705504.07230HepG2SSB
AKAP6ENSG00000151320.6109.2993061.886300.820502.984402.34320HepG2SUCLG1
AKAP6ENSG00000151320.6121.8047052.577701.211903.664602.12050HepG2SUGP2
AKAP6ENSG00000151320.628.7290058.74100-1.031901.996101.40780HepG2SUPV3L1
AKAP6ENSG00000151320.634.0690066.38060-0.962302.072401.43260HepG2TARDBP
AKAP6ENSG00000151320.628.8003057.82420-1.005601.927801.31500HepG2XRN2
AKAP6ENSG00000151320.680.4333043.815000.876302.425601.79040HepG2ZC3H8
AKAP6ENSG00000151320.64.1227017.88060-2.116702.248501.49530K562RBM22
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AKAP6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AKAP6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AKAP6 is not avaliable on ENCORE database.