HIST1H3J

General Information

Gene Name : HIST1H3J
Gene ID : ENSG00000197153.4
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HIST1H3J)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HIST1H3J	ENSG00000197153.4	0.00	0.25	0.12	ENCSR000AEF
HepG2	HIST1H3J	ENSG00000197153.4	0.00	0.15	0.07	ENCSR985KAT
K562	HIST1H3J	ENSG00000197153.4	0.40	0.81	0.60	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HIST1H3J is not avaliable on ENCORE database.

Proteins bound to RNA

HIST1H3J RNA is bound by 22 proteins.

eCLIP assay for HIST1H3J is not avaliable on ENCORE database.

22 proteins are bound to HIST1H3J RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	27858158	27858180	-	3'-UTR,CDS	6.52022	65.13576	K562	SLBP
chr6	27858094	27858139	-	3'-UTR	10.59841	248.63330	K562	SLBP
chr6	27858139	27858158	-	3'-UTR	7.29492	71.09118	K562	SLBP
chr6	27858519	27858547	-	CDS,intron-Distal	3.41196	36.42632	K562	DDX3X
chr6	27858547	27858578	-	CDS,intron-Distal	3.90672	41.51530	K562	DDX3X
chr6	27860478	27860521	-	3'-UTR,intron-Distal	3.51853	3.14006	K562	TBRG4
chr6	27860423	27860519	-	3'-UTR,intron-Distal	5.16478	6.09249	HepG2	LSM11
chr6	27860650	27860679	-	CDS,intron-Distal	5.22528	37.76792	K562	YBX3
chr6	27860886	27860932	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.97427	33.34898	K562	GEMIN5
chr6	27860703	27860763	-	CDS,intron-Distal	3.51570	6.13998	HepG2	G3BP1
chr6	27860422	27860474	-	intron-Distal	6.01608	6.95340	K562	LSM11
chr6	27860915	27860937	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.74820	400.00000	K562	YBX3
chr6	27860487	27860511	-	3'-UTR,intron-Distal	5.20767	6.23813	HepG2	SUB1
chr6	27860606	27860631	-	CDS,intron-Distal	4.23617	400.00000	K562	YBX3
chr6	27860691	27860776	-	CDS,intron-Distal	3.47038	9.61425	HepG2	GRWD1
chr6	27860588	27860594	-	CDS,intron-Distal	3.87562	400.00000	K562	YBX3
chr6	27860876	27860950	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.05008	11.35957	K562	EIF3G
chr6	27860889	27860932	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.31883	5.39895	K562	DROSHA
chr6	27860530	27860548	-	3'-UTR,CDS,intron-Distal	4.36459	5.29232	K562	GRWD1
chr6	27860551	27860627	-	CDS,intron-Distal	3.29504	12.64308	K562	GRWD1
chr6	27860564	27860640	-	CDS,intron-Distal	4.31768	15.90319	K562	ZNF800
chr6	27860875	27860905	-	CDS,intron-Distal,intron-Proximal	3.25393	400.00000	K562	DDX3X
chr6	27860815	27860850	-	CDS,intron-Distal	3.78055	5.70053	K562	GEMIN5
chr6	27860550	27860655	-	CDS,intron-Distal	3.51188	17.44728	K562	PUM1
chr6	27860476	27860489	-	3'-UTR,intron-Distal	6.52308	400.00000	K562	PUM2
chr6	27860483	27860502	-	3'-UTR,intron-Distal	4.15060	4.77467	K562	SND1
chr6	27860891	27860896	-	CDS,intron-Distal,intron-Proximal	3.76027	74.61663	K562	YBX3
chr6	27860496	27860510	-	3'-UTR,intron-Distal	4.33985	6.84754	HepG2	GRWD1
chr6	27860633	27860650	-	CDS,intron-Distal	4.62154	32.46358	K562	YBX3
chr6	27860780	27860848	-	CDS,intron-Distal	3.55043	7.69141	K562	RBM15
chr6	27860655	27860755	-	CDS,intron-Distal	3.42236	11.80590	K562	PUM1
chr6	27860679	27860695	-	CDS,intron-Distal	4.12378	22.77394	K562	YBX3
chr6	27860883	27860946	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.27358	6.88807	K562	FXR2
chr6	27860483	27860518	-	3'-UTR,intron-Distal	3.80085	10.13632	K562	UCHL5
chr6	27860883	27860949	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.04797	41.63227	K562	RPS3
chr6	27860534	27860634	-	3'-UTR,CDS,intron-Distal	3.50169	16.31251	HepG2	GRWD1
chr6	27860715	27860782	-	CDS,intron-Distal	4.50990	47.73046	K562	RPS3
chr6	27860882	27860890	-	CDS,intron-Distal,intron-Proximal	3.12647	39.38980	K562	YBX3
chr6	27860896	27860904	-	CDS,intron-Distal,intron-Proximal	3.80082	76.65545	K562	YBX3
chr6	27860579	27860588	-	CDS,intron-Distal	3.99211	400.00000	K562	YBX3
chr6	27860478	27860519	-	3'-UTR,intron-Distal	3.79852	9.51494	K562	GNL3
chr6	27860478	27860521	-	3'-UTR,intron-Distal	11.99676	400.00000	K562	SLBP
chr6	27860708	27860799	-	CDS,intron-Distal	3.65643	13.87150	HepG2	RPS3
chr6	27860905	27860935	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.39429	400.00000	K562	DDX3X
chr6	27860601	27860606	-	CDS,intron-Distal	4.03898	400.00000	K562	YBX3
chr6	27860438	27860464	-	intron-Distal	3.29386	3.93112	K562	RBM15
chr6	27860521	27860571	-	3'-UTR,CDS,intron-Distal	7.41399	400.00000	K562	SLBP
chr6	27860876	27860929	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.48369	7.87299	HepG2	SUB1
chr6	27860937	27860949	-	5'-UTR,intron-Distal,intron-Proximal	3.29145	33.40040	K562	DDX3X
chr6	27860890	27860930	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51711	9.34109	K562	RBM15
chr6	27860797	27860850	-	CDS,intron-Distal	3.25354	6.02287	K562	XRCC6
chr6	27860472	27860507	-	3'-UTR,intron-Distal	4.57879	5.85529	K562	RBM15
chr6	27860493	27860533	-	3'-UTR,intron-Distal	4.51069	3.27240	K562	APOBEC3C
chr6	27860799	27860862	-	CDS,intron-Distal	3.89937	11.14441	HepG2	RPS3
chr6	27860596	27860601	-	CDS,intron-Distal	3.90048	400.00000	K562	YBX3
chr6	27860885	27860931	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.73400	7.61854	HepG2	RPS3
chr6	27860820	27860875	-	CDS,intron-Distal	4.75784	64.96405	K562	RPS3
chr6	27860491	27860525	-	3'-UTR,intron-Distal	6.01835	400.00000	K562	PUM2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for HIST1H3J is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for HIST1H3J is not available on ENCORE database.
3 RBPs can affect the levels of HIST1H3J.

The Knockdown/knockout RNA-Seq assay for HIST1H3J is not available on ENCORE database.

3 RBPs can affect the gene expression of HIST1H3J :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HIST1H3J	ENSG00000197153.3	32.33250	4.29020	2.91380	4.37550	3.66930	K562	AQR
HIST1H3J	ENSG00000197153.3	44.43140	2.06220	4.42920	9.17990	8.14300	K562	HNRNPC
HIST1H3J	ENSG00000197153.3	21.07830	1.47780	3.83410	4.32990	3.44960	K562	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HIST1H3J

General Information

Functions

Localization

Domains (AlphaFold: HIST1H3J)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HIST1H3J is not avaliable on ENCORE database.

22 proteins are bound to HIST1H3J RNA:

eCLIP assay for HIST1H3J is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HIST1H3J is not available on ENCORE database.

3 RBPs can affect the gene expression of HIST1H3J :

The Knockdown/knockout RNA-Seq assay for HIST1H3J is not available on ENCORE database.

No RBPs affect the alternative splcing events of HIST1H3J on ENCORE database.

The Knockdown/knockout RNA-Seq assay for HIST1H3J is not avaliable on ENCORE database.