SUSD2

General Information

Gene Name       : SUSD2
Gene ID             : ENSG00000099994.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SUSD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUSD2ENSG00000099994.100.000.010.01ENCSR000AEF
HepG2SUSD2ENSG00000099994.107.582.094.83ENCSR985KAT
K562SUSD2ENSG00000099994.100.020.030.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUSD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SUSD2 RNA is bound by 3 proteins.  







eCLIP assay for SUSD2 is not avaliable on ENCORE database.





3 proteins are bound to SUSD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr222458469524584834+3'-UTR3.125105.39224HepG2IGF2BP1
chr222458467724584837+3'-UTR5.303995.98124HepG2DDX55
chr222458467424584833+3'-UTR4.6530911.47399HepG2LARP4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUSD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUSD2 is not available on ENCORE database.

  • 115 RBPs can affect the levels of SUSD2.  








The Knockdown/knockout RNA-Seq assay for SUSD2 is not available on ENCORE database.





115 RBPs can affect the gene expression of SUSD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUSD2ENSG00000099994.1057.27490119.68240-1.063203.926402.66610HepG2AATF
SUSD2ENSG00000099994.101233.58590312.531701.9807084.4978082.36790HepG2ACO1
SUSD2ENSG00000099994.10112.31120199.02510-0.825404.058902.87580HepG2ADAR
SUSD2ENSG00000099994.103224.39500270.129703.5772024.9477023.53040HepG2AKAP1
SUSD2ENSG00000099994.10306.75380483.24600-0.655704.927003.10530HepG2ATP5C1
SUSD2ENSG00000099994.10810.44420416.947200.9587017.4600016.00690HepG2AUH
SUSD2ENSG00000099994.101931.23720188.834903.35420101.1175096.74830HepG2BCLAF1
SUSD2ENSG00000099994.101174.25670401.243201.5491027.0681023.74680HepG2BUD13
SUSD2ENSG00000099994.10457.81180212.338801.1083010.179008.77840HepG2CIRBP
SUSD2ENSG00000099994.10221.31000312.38550-0.497303.242302.53280HepG2CKAP4
SUSD2ENSG00000099994.101566.16250580.472501.4318027.3423025.47260HepG2CPSF6
SUSD2ENSG00000099994.10363.24460204.098600.831607.400905.75410HepG2YBX3
SUSD2ENSG00000099994.1060.71260122.58020-1.013703.452201.87230HepG2CSTF2T
SUSD2ENSG00000099994.10686.55390234.859301.5475027.9223026.32680HepG2CELF1
SUSD2ENSG00000099994.10142.64920289.01110-1.018709.465608.09820HepG2DDX19B
SUSD2ENSG00000099994.10358.61280131.953601.4423014.7681013.34570HepG2DDX21
SUSD2ENSG00000099994.10659.74280258.727101.3504016.5022015.10770HepG2DDX3X
SUSD2ENSG00000099994.10587.12030255.967301.1976015.3650012.75620HepG2DDX47
SUSD2ENSG00000099994.10444.03950176.908401.3276015.9560013.20650HepG2DDX52
SUSD2ENSG00000099994.102049.78720213.799503.2610090.8877087.74270HepG2DDX55
SUSD2ENSG00000099994.10631.06930394.556500.677505.974904.54250HepG2DDX5
SUSD2ENSG00000099994.101278.48580222.338402.523508.404807.38210HepG2DDX6
SUSD2ENSG00000099994.10394.63690193.293401.029609.806108.08870HepG2DHX30
SUSD2ENSG00000099994.10433.68070298.987900.536404.095103.30300HepG2DKC1
SUSD2ENSG00000099994.10541.33300200.407201.4335016.3038014.73350HepG2DNAJC21
SUSD2ENSG00000099994.10275.71500198.640900.472902.835302.17630HepG2DNAJC2
SUSD2ENSG00000099994.10414.85070211.079900.974707.371805.94780HepG2EEF2
SUSD2ENSG00000099994.10313.35100175.972800.832305.077803.57600HepG2EFTUD2
SUSD2ENSG00000099994.101235.60210213.653502.5318064.1350061.71910HepG2EIF2S1
SUSD2ENSG00000099994.10249.84250171.353500.543902.108501.31120HepG2EIF3D
SUSD2ENSG00000099994.10194.86550325.22790-0.739004.279802.02610HepG2EIF3H
SUSD2ENSG00000099994.10943.06960236.070601.9980015.0234013.55150HepG2EIF4A3
SUSD2ENSG00000099994.10102.48600229.92720-1.165805.753204.78510HepG2EIF4B
SUSD2ENSG00000099994.10446.66000238.667100.904107.743006.41050HepG2EIF4G2
SUSD2ENSG00000099994.10244.85060463.93750-0.922008.447906.69130HepG2ESF1
SUSD2ENSG00000099994.10608.71680478.746000.346402.544001.96360HepG2ETF1
SUSD2ENSG00000099994.10151.64580305.32980-1.009708.159606.73990HepG2EWSR1
SUSD2ENSG00000099994.10268.56470581.39160-1.114203.403502.27190HepG2FTO
SUSD2ENSG00000099994.10418.48910264.293100.663004.675103.67000HepG2FUBP3
SUSD2ENSG00000099994.10331.47110238.311100.475902.110901.50390HepG2FXR1
SUSD2ENSG00000099994.10362.32750234.708700.626303.443802.44390HepG2G3BP2
SUSD2ENSG00000099994.10254.46770152.569300.737902.934002.00880HepG2GEMIN5
SUSD2ENSG00000099994.10597.52410132.276702.1753016.4431013.96810HepG2GNB2L1
SUSD2ENSG00000099994.101013.86230658.110700.623403.627602.90300HepG2GPKOW
SUSD2ENSG00000099994.10431.55880298.330800.532504.527303.30280HepG2HDGF
SUSD2ENSG00000099994.10170.0604067.913501.324206.782504.58050HepG2HNRNPA0
SUSD2ENSG00000099994.10398.02790232.098100.778006.954205.58960HepG2HNRNPA2B1
SUSD2ENSG00000099994.10339.19260225.052700.591703.198102.45960HepG2HNRNPC
SUSD2ENSG00000099994.10137.4669069.538100.983103.958602.13690HepG2HNRNPD
SUSD2ENSG00000099994.10578.62650373.111000.632905.523904.22760HepG2HNRNPM
SUSD2ENSG00000099994.10892.53130223.564701.9971065.1690062.62810HepG2HNRNPU
SUSD2ENSG00000099994.10840.08150629.297800.416704.227503.34890HepG2IGF2BP1
SUSD2ENSG00000099994.10769.83990224.620501.7770029.4799027.56810HepG2IGF2BP2
SUSD2ENSG00000099994.1077.59000210.89140-1.442604.411503.17690HepG2IGF2BP3
SUSD2ENSG00000099994.10482.65990228.363801.0796017.1680015.52640HepG2ILF2
SUSD2ENSG00000099994.10394.2808078.267002.3326022.0227018.42750HepG2ILF3
SUSD2ENSG00000099994.10204.1854076.524101.415804.929903.27640HepG2KHDRBS1
SUSD2ENSG00000099994.10790.03430225.973901.805702.971601.92610HepG2KHSRP
SUSD2ENSG00000099994.10366.10430285.644500.357902.219501.30430HepG2KIF1C
SUSD2ENSG00000099994.101128.95700367.811501.6179022.8032019.42090HepG2KRR1
SUSD2ENSG00000099994.10260.13830129.647801.004603.746902.42540HepG2LARP7
SUSD2ENSG00000099994.10460.26450238.394800.949007.678606.60080HepG2MAGOH
SUSD2ENSG00000099994.10203.76910109.714600.893104.343802.37190HepG2MARK2
SUSD2ENSG00000099994.10295.94600179.339500.722502.728301.68390HepG2METAP2
SUSD2ENSG00000099994.103438.14520437.650702.97370161.22690157.45700HepG2MSI2
SUSD2ENSG00000099994.10721.57460245.338501.5563021.6118019.95020HepG2NCBP2
SUSD2ENSG00000099994.10202.45030117.215000.788303.540801.93060HepG2NIP7
SUSD2ENSG00000099994.101081.33640196.526602.4599028.4096024.88430HepG2NONO
SUSD2ENSG00000099994.10511.54420206.854401.306104.124701.33240HepG2NPM1
SUSD2ENSG00000099994.10139.71200556.80340-1.994707.212706.04060HepG2NSUN2
SUSD2ENSG00000099994.10908.4524073.383203.6298058.8355055.42810HepG2PABPC1
SUSD2ENSG00000099994.10361.33800218.413600.726204.446103.54370HepG2PABPC4
SUSD2ENSG00000099994.10157.34280236.00570-0.584903.083202.44830HepG2PCBP1
SUSD2ENSG00000099994.10279.86510128.875801.118706.929005.35360HepG2PCBP2
SUSD2ENSG00000099994.10215.91690141.704400.607502.867601.61360HepG2PKM
SUSD2ENSG00000099994.10447.88120199.401701.1673010.955109.53890HepG2PPIL4
SUSD2ENSG00000099994.10237.27910135.452500.808703.128301.84180HepG2PRPF6
SUSD2ENSG00000099994.10537.33980240.153901.1618017.8252016.66370HepG2PTBP1
SUSD2ENSG00000099994.10665.40880239.058401.4768024.1192022.59620HepG2PUF60
SUSD2ENSG00000099994.10518.64050318.322400.704102.732902.12020HepG2PUS1
SUSD2ENSG00000099994.10556.04080260.072801.0962014.2694013.00710HepG2QKI
SUSD2ENSG00000099994.10261.56830518.52810-0.9872012.0866010.49270HepG2RBM15
SUSD2ENSG00000099994.1059.56020400.13580-2.7481044.1317042.53690HepG2RBM22
SUSD2ENSG00000099994.10375.35010236.040300.669104.713703.85390HepG2RBM25
SUSD2ENSG00000099994.10354.85730122.241901.5374012.5662010.71630HepG2RPS10
SUSD2ENSG00000099994.10280.95040166.731600.752704.568803.79960HepG2RPS19
SUSD2ENSG00000099994.10248.69870144.173500.786503.500502.60080HepG2RPS2
SUSD2ENSG00000099994.10224.5689080.640501.477509.269407.83810HepG2RPS3A
SUSD2ENSG00000099994.10477.42120199.093601.2617020.0180018.50880HepG2SAFB2
SUSD2ENSG00000099994.10337.43840167.345801.011707.662206.12230HepG2SERBP1
SUSD2ENSG00000099994.10419.77610250.014600.747506.706105.84910HepG2SF3B4
SUSD2ENSG00000099994.10435.14750229.197600.9248010.965909.72290HepG2SLBP
SUSD2ENSG00000099994.10217.92290127.192400.776702.774001.81540HepG2SMNDC1
SUSD2ENSG00000099994.10473.00450169.613101.479505.794303.70950HepG2SNRNP200
SUSD2ENSG00000099994.10181.87320691.72000-1.927306.918005.67630HepG2SNRNP70
SUSD2ENSG00000099994.10233.81160668.77810-1.516205.449204.00340HepG2SRSF3
SUSD2ENSG00000099994.10325.71120236.022400.464602.585901.97630HepG2SRSF5
SUSD2ENSG00000099994.10381.61880212.317100.845808.806407.92000HepG2SRSF9
SUSD2ENSG00000099994.10732.18680392.356200.8999015.3023014.29370HepG2SSB
SUSD2ENSG00000099994.10788.47350371.261301.0865010.366407.88940HepG2SUGP2
SUSD2ENSG00000099994.10516.30400365.141300.499703.359502.33050HepG2SUPT6H
SUSD2ENSG00000099994.10765.52260212.771201.8470014.7924013.44290HepG2SUPV3L1
SUSD2ENSG00000099994.101011.86810611.877900.725603.383202.59100HepG2TARDBP
SUSD2ENSG00000099994.10667.00770217.230701.6184031.5666030.20790HepG2TIAL1
SUSD2ENSG00000099994.10322.43520219.177100.556803.924903.27720HepG2TRIM56
SUSD2ENSG00000099994.10259.42850136.162800.929905.439103.28660HepG2TROVE2
SUSD2ENSG00000099994.10408.73270197.578001.048602.917401.90100HepG2U2AF2
SUSD2ENSG00000099994.10946.70190247.178701.937303.090602.20600HepG2UBE2L3
SUSD2ENSG00000099994.1047.51410125.64750-1.403002.493401.77270HepG2UCHL5
SUSD2ENSG00000099994.101254.70460326.846201.9406015.3898013.99700HepG2UPF1
SUSD2ENSG00000099994.10188.8649072.231501.386608.165406.29300HepG2XPO5
SUSD2ENSG00000099994.10252.66760353.60560-0.484903.367402.63740HepG2ZC3H8
SUSD2ENSG00000099994.10729.20110359.463001.020408.911008.07250HepG2ZNF622
SUSD2ENSG00000099994.1018.266302.969202.621002.480801.91870K562AQR
SUSD2ENSG00000099994.1014.241701.031903.786702.920202.18510K562EIF2S2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUSD2 is not available on ENCORE database.





1 RBPs can affect the splicing of SUSD2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSSUSD2ENSG00000099994.10chr22+2458073324580908245808452458090824580103245802710.111000.003190.06653longerHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUSD2 is not avaliable on ENCORE database.