PHKA2

General Information

Gene Name : PHKA2
Gene ID : ENSG00000044446.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PHKA2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PHKA2	ENSG00000044446.11	7.75	11.69	9.72	ENCSR000AEF
HepG2	PHKA2	ENSG00000044446.11	36.37	25.04	30.70	ENCSR985KAT
K562	PHKA2	ENSG00000044446.11	14.51	15.22	14.87	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PHKA2 is not avaliable on ENCORE database.

Proteins bound to RNA

PHKA2 RNA is bound by 35 proteins.

CanvasJS.com

eCLIP assay for PHKA2 is not avaliable on ENCORE database.

35 proteins are bound to PHKA2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	18956324	18956371	-	intron-Distal	7.61493	74.51509	HepG2	XPO5
chrX	18956371	18956390	-	intron-Distal	8.50866	68.33346	HepG2	XPO5
chrX	18963195	18963275	-	CDS,intron-Distal,intron-Proximal	3.72776	55.78225	HepG2	BCLAF1
chrX	18954172	18954224	-	CDS,intron-Distal,intron-Proximal	3.30044	37.35292	HepG2	BCLAF1
chrX	18958129	18958158	-	CDS,intron-Distal	5.19148	29.93330	HepG2	BCLAF1
chrX	18936901	18936956	-	CDS,intron-Distal	3.38706	29.80891	HepG2	BCLAF1
chrX	18943827	18943878	-	CDS,intron-Distal	3.56787	27.09450	HepG2	BCLAF1
chrX	18928989	18928999	-	CDS,intron-Distal,intron-Proximal	3.87864	24.90115	HepG2	BCLAF1
chrX	18926981	18927024	-	CDS,intron-Distal	3.95088	24.47709	HepG2	BCLAF1
chrX	18944671	18944705	-	CDS,intron-Distal,intron-Proximal	3.63518	24.41444	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 206 entries

eCLIP assay for PHKA2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PHKA2 is not available on ENCORE database.
136 RBPs can affect the levels of PHKA2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PHKA2 is not available on ENCORE database.

136 RBPs can affect the gene expression of PHKA2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PHKA2	ENSG00000044446.7	1221.89620	6051.82200	-2.30820	253.22960	250.68180	HepG2	SRSF1
PHKA2	ENSG00000044446.7	1911.86770	5408.56830	-1.50030	122.92390	120.47040	HepG2	ACO1
PHKA2	ENSG00000044446.7	1268.04940	4787.49390	-1.91670	73.60580	71.66660	HepG2	RBM22
PHKA2	ENSG00000044446.7	2671.48940	5406.98600	-1.01720	69.27880	67.03450	HepG2	CKAP4
PHKA2	ENSG00000044446.7	2193.92460	4442.26330	-1.01780	67.81600	65.71010	HepG2	PUM1
PHKA2	ENSG00000044446.7	2714.05480	5550.96910	-1.03230	59.39480	57.18210	HepG2	UTP3
PHKA2	ENSG00000044446.7	2959.90130	6197.69490	-1.06620	58.73120	57.00920	HepG2	NELFE
PHKA2	ENSG00000044446.7	2819.00800	5508.91810	-0.96660	55.58680	53.55150	HepG2	PUS1
PHKA2	ENSG00000044446.7	1683.88910	6546.62240	-1.95900	54.84380	52.95440	HepG2	AKAP1
PHKA2	ENSG00000044446.7	2712.00110	5568.98230	-1.03810	54.39280	52.64780	HepG2	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 151 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PHKA2 is not available on ENCORE database.

14 RBPs can affect the splicing of PHKA2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PHKA2	ENSG00000044446.7	chrX	-	18938149	18938319			18936798	18936972	18942173	18942252	-0.07500	0.00000	0.00002	excluded	HepG2	U2AF1
SE	PHKA2	ENSG00000044446.7	chrX	-	18918787	18918817			18915280	18915451	18919602	18919721	0.34500	0.00000	0.00567	included	HepG2	DHX30
SE	PHKA2	ENSG00000044446.7	chrX	-	18948880	18948965			18947345	18947424	18949758	18949866	0.13000	0.00000	0.00009	included	HepG2	SF3A3
SE	PHKA2	ENSG00000044446.7	chrX	-	18918787	18918817			18915280	18915451	18919602	18919721	0.34800	0.00000	0.00098	included	HepG2	SSB
SE	PHKA2	ENSG00000044446.7	chrX	-	18920909	18921028			18919602	18919721	18923875	18923933	0.20400	0.00000	0.00001	included	K562	HNRNPC
SE	PHKA2	ENSG00000044446.7	chrX	-	18920909	18921028			18919602	18919721	18923875	18923933	0.08300	0.00001	0.00070	included	HepG2	HNRNPC
MXE	PHKA2	ENSG00000044446.7	chrX	-	18961827	18961926	18963195	18963276	18959646	18959793	18966861	18966944	-0.28600	0.00003	0.03691	2included	K562	SLBP
SE	PHKA2	ENSG00000044446.7	chrX	-	18942498	18942643			18942173	18942252	18943785	18943895	-0.05400	0.00006	0.00307	excluded	HepG2	SF3A3
A5SS	PHKA2	ENSG00000044446.7	chrX	-	18956744	18956867			18956809	18956867	18954172	18954268	-0.18500	0.00009	0.01178	shorter	HepG2	SF3B4
SE	PHKA2	ENSG00000044446.7	chrX	-	18920909	18921028			18919602	18919721	18923875	18923933	0.05700	0.00013	0.07692	included	K562	PUM2

Showing 1 to 10 of 21 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PHKA2

General Information

Functions

Localization

Domains (AlphaFold: PHKA2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PHKA2 is not avaliable on ENCORE database.

35 proteins are bound to PHKA2 RNA:

eCLIP assay for PHKA2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PHKA2 is not available on ENCORE database.

136 RBPs can affect the gene expression of PHKA2 :

The Knockdown/knockout RNA-Seq assay for PHKA2 is not available on ENCORE database.

14 RBPs can affect the splicing of PHKA2 :

The Knockdown/knockout RNA-Seq assay for PHKA2 is not avaliable on ENCORE database.