RAD51L3-RFFL

General Information

Gene Name : RAD51L3-RFFL
Gene ID : ENSG00000267618.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RAD51L3-RFFL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Average TPM	Experiment ID
Gm12878	RAD51L3-RFFL	ENSG00000267618.5	0.31	0.15	ENCSR000AEF
HepG2	RAD51L3-RFFL	ENSG00000267618.5	0.00	0.00	ENCSR985KAT
K562	RAD51L3-RFFL	ENSG00000267618.5	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RAD51L3-RFFL is not avaliable on ENCORE database.

Proteins bound to RNA

RAD51L3-RFFL RNA is bound by 21 proteins.

eCLIP assay for RAD51L3-RFFL is not avaliable on ENCORE database.

21 proteins are bound to RAD51L3-RFFL RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	33338606	33338716	-	3'-UTR,intron-Distal,intron-Proximal	3.64349	3.52299	HepG2	AKAP1
chr17	33338285	33338382	-	3'-UTR,intron-Distal,intron-Proximal	4.97564	29.49816	K562	UPF1
chr17	33338418	33338549	-	3'-UTR,intron-Distal,intron-Proximal	3.72143	5.89157	HepG2	AKAP1
chr17	33338382	33338455	-	3'-UTR,intron-Distal	5.58910	20.44698	K562	UPF1
chr17	33338414	33338556	-	3'-UTR,intron-Distal,intron-Proximal	3.57070	7.40079	HepG2	UPF1
chr17	33338457	33338616	-	3'-UTR,intron-Distal,intron-Proximal	4.64392	25.77479	K562	UPF1
chr17	33338558	33338683	-	3'-UTR,intron-Distal,intron-Proximal	3.49676	5.71477	HepG2	UPF1
chr17	33343361	33343471	-	CDS,intron-Distal,intron-Proximal	4.26828	6.41037	HepG2	BUD13
chr17	33430324	33430377	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.34233	4.65563	K562	AQR
chr17	33353514	33353599	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.68997	5.55825	HepG2	U2AF2
chr17	33430266	33430382	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.90517	5.64238	K562	PRPF8
chr17	33343346	33343407	-	CDS,intron-Distal,intron-Proximal	3.50974	7.85990	HepG2	PRPF8
chr17	33428218	33428275	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.91270	3.20743	HepG2	PPIG
chr17	33430279	33430344	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.67368	3.32039	HepG2	PPIG
chr17	33415975	33416015	-	intron-Distal	4.30507	7.25311	HepG2	NKRF
chr17	33404700	33404770	-	intron-Distal	4.74303	6.44072	HepG2	HNRNPM
chr17	33427473	33427548	-	3'-UTR,intron-Distal,intron-Proximal	4.54537	4.07810	K562	UPF1
chr17	33378820	33378868	-	intron-Distal	3.34486	3.66782	HepG2	HNRNPM
chr17	33344541	33344644	-	CDS,intron-Distal,intron-Proximal	4.03569	4.41267	HepG2	PPIG
chr17	33341706	33341763	-	CDS,intron-Distal,intron-Proximal	3.89579	4.00320	K562	AQR
chr17	33426564	33426600	-	intron-Distal	4.36409	4.22051	K562	UPF1
chr17	33376283	33376344	-	intron-Distal	4.38961	4.62276	K562	TARDBP
chr17	33415537	33415579	-	intron-Distal	3.15134	3.11000	HepG2	HNRNPM
chr17	33424811	33424931	-	intron-Distal	5.55391	11.21630	K562	UPF1
chr17	33387688	33387757	-	intron-Distal	4.17369	4.28663	HepG2	SUGP2
chr17	33442872	33442951	-	intron-Distal	4.29211	3.28841	HepG2	PTBP1
chr17	33409260	33409338	-	intron-Distal	3.84332	4.67922	K562	PTBP1
chr17	33416015	33416089	-	intron-Distal	3.52384	10.30254	HepG2	NKRF
chr17	33379464	33379577	-	intron-Distal	4.45577	3.55640	HepG2	QKI
chr17	33364269	33364359	-	intron-Distal	3.19924	8.93026	HepG2	QKI
chr17	33379177	33379276	-	intron-Distal	3.42459	3.76326	HepG2	RBFOX2
chr17	33359529	33359613	-	intron-Distal	3.03421	3.02891	HepG2	HNRNPL
chr17	33416131	33416205	-	5'-UTR,intron-Distal	4.45053	5.82353	HepG2	XRN2
chr17	33415984	33416063	-	intron-Distal	4.94453	11.52775	HepG2	XRN2
chr17	33430421	33430473	-	intron-Distal,intron-Proximal	3.16018	3.91115	K562	LIN28B
chr17	33363648	33363711	-	intron-Distal	4.04817	6.30359	HepG2	QKI
chr17	33428008	33428068	-	3'-UTR,CDS,intron-Distal	3.16293	4.05586	HepG2	U2AF2
chr17	33430394	33430416	-	intron-Distal,intron-Proximal	5.06552	9.64069	K562	YBX3
chr17	33407281	33407357	-	intron-Distal	4.09261	3.30440	HepG2	QKI
chr17	33427261	33427376	-	3'-UTR,intron-Distal,intron-Proximal	4.35576	8.27548	K562	UPF1
chr17	33402692	33402744	-	intron-Distal	3.10214	4.37623	HepG2	HNRNPM
chr17	33405546	33405622	-	intron-Distal	3.00906	3.57155	HepG2	ILF3
chr17	33425979	33426028	-	intron-Distal	3.72443	5.15345	K562	UPF1
chr17	33430428	33430456	-	intron-Distal,intron-Proximal	3.96026	4.14792	HepG2	XPO5
chr17	33442883	33442941	-	intron-Distal	4.72076	3.91475	K562	PTBP1
chr17	33379567	33379585	-	intron-Distal	5.16251	7.79427	HepG2	PTBP1
chr17	33359730	33359816	-	intron-Distal	4.42234	4.74221	HepG2	PTBP1
chr17	33364595	33364669	-	intron-Distal	4.02452	6.30359	HepG2	QKI
chr17	33399551	33399614	-	intron-Distal	4.10989	3.87294	K562	TARDBP
chr17	33379908	33379961	-	intron-Distal	3.48666	4.33009	HepG2	SUGP2
chr17	33409247	33409339	-	intron-Distal	3.96607	11.32031	HepG2	PTBP1
chr17	33430456	33430471	-	intron-Distal,intron-Proximal	4.83805	4.33458	HepG2	XPO5
chr17	33415952	33416097	-	intron-Distal,intron-Proximal	5.33283	8.14499	K562	XRN2
chr17	33378413	33378454	-	intron-Distal	4.00698	3.54208	HepG2	SUGP2
chr17	33430416	33430436	-	intron-Distal,intron-Proximal	5.18888	10.74913	K562	YBX3
chr17	33430386	33430472	-	intron-Distal,intron-Proximal	5.83345	10.47111	K562	WRN
chr17	33402157	33402243	-	intron-Distal	3.98241	6.98528	HepG2	HNRNPM
chr17	33379482	33379567	-	intron-Distal	3.99576	9.41297	HepG2	PTBP1
chr17	33427118	33427235	-	3'-UTR,intron-Distal	4.33785	7.83400	K562	UPF1
chr17	33341212	33341344	-	intron-Distal	3.21433	3.35377	HepG2	QKI
chr17	33379515	33379588	-	intron-Distal	4.37482	3.91475	K562	PTBP1
chr17	33341708	33341813	-	CDS,intron-Distal,intron-Proximal	4.80782	4.97857	HepG2	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RAD51L3-RFFL is not avaliable on ENCORE database.

Summary
AS Affected by

Diffrential Expression

The Knockdown/knockout assay for RAD51L3-RFFL is not available on ENCORE database.
No RBPs affect the gene expression of RAD51L3-RFFL on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RAD51L3-RFFL is not available on ENCORE database.

No RBPs affect the gene expression of RAD51L3-RFFL on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RAD51L3-RFFL is not available on ENCORE database.

5 RBPs can affect the splicing of RAD51L3-RFFL :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RAD51L3-RFFL	ENSG00000267618.1	chr17	-	33434384	33434466			33433404	33433500	33446129	33446191	-0.58100	0.00591	0.08630	excluded	HepG2	U2AF1
SE	RAD51L3-RFFL	ENSG00000267618.1	chr17	-	33433146	33433268			33430472	33430563	33433404	33433500	0.27100	0.00006	0.05882	included	K562	TROVE2
SE	RAD51L3-RFFL	ENSG00000267618.1	chr17	-	33433146	33433268			33430472	33430563	33433404	33433500	0.80000	0.00436	0.08638	included	HepG2	HNRNPK
SE	RAD51L3-RFFL	ENSG00000267618.1	chr17	-	33434006	33434141			33433404	33433500	33446129	33446191	-0.53000	0.00250	0.09183	excluded	HepG2	SF3B4
MXE	RAD51L3-RFFL	ENSG00000267618.1	chr17	-	33434384	33434466	33445519	33445638	33433404	33433500	33446129	33446191	0.55800	0.00011	0.00642	1included	K562	UCHL5

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RAD51L3-RFFL

General Information

Functions

Localization

Domains (AlphaFold: RAD51L3-RFFL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RAD51L3-RFFL is not avaliable on ENCORE database.

21 proteins are bound to RAD51L3-RFFL RNA:

eCLIP assay for RAD51L3-RFFL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RAD51L3-RFFL is not available on ENCORE database.

No RBPs affect the gene expression of RAD51L3-RFFL on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RAD51L3-RFFL is not available on ENCORE database.

5 RBPs can affect the splicing of RAD51L3-RFFL :

The Knockdown/knockout RNA-Seq assay for RAD51L3-RFFL is not avaliable on ENCORE database.