UBP1

General Information

Gene Name       : UBP1
Gene ID             : ENSG00000153560.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: UBP1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UBP1ENSG00000153560.1169.7063.6766.69ENCSR000AEF
HepG2UBP1ENSG00000153560.1155.4977.1466.31ENCSR985KAT
K562UBP1ENSG00000153560.1184.2095.9890.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for UBP1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • UBP1 RNA is bound by 52 proteins.  







eCLIP assay for UBP1 is not avaliable on ENCORE database.





52 proteins are bound to UBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr33343816433438252-3'-UTR,intron-Distal,intron-Proximal4.2528320.95808K562KHSRP
chr33342997333430053-3'-UTR,intron-Distal3.002433.39208HepG2CSTF2
chr33343133933431416-3'-UTR,intron-Distal4.320616.42098HepG2EIF3H
chr33343084733430894-3'-UTR,intron-Distal3.634144.50550K562UPF1
chr33343053133430592-3'-UTR,intron-Distal4.582143.06406HepG2IGF2BP1
chr33343770833437791-3'-UTR,CDS,intron-Distal,intron-Proximal3.5758114.30933HepG2U2AF2
chr33343043533430474-3'-UTR,intron-Distal3.380094.79181K562FAM120A
chr33343095833431027-3'-UTR,intron-Distal4.6567012.74229HepG2PCBP2
chr33343051533430619-3'-UTR,intron-Distal3.216754.87066K562IGF2BP1
chr33342997633430036-3'-UTR,intron-Distal4.0253812.14680K562PABPC4
chr33342998233430099-3'-UTR,intron-Distal3.514729.23696K562ZC3H11A
chr33343003633430082-3'-UTR,intron-Distal3.695138.40205K562PABPC4
chr33343005633430105-3'-UTR,intron-Distal3.875773.08510HepG2ZC3H11A
chr33342998933430039-3'-UTR,intron-Distal4.373135.38267K562DDX55
chr33343084233430949-3'-UTR,intron-Distal3.5248416.02364K562FAM120A
chr33342998233430099-3'-UTR,intron-Distal3.183526.94624HepG2LSM11
chr33343041533430489-3'-UTR,intron-Distal3.030506.90288K562UPF1
chr33348142733481515-5'-UTR,intron-Distal,intron-Proximal3.1550414.82702HepG2DDX3X
chr33348167133481746-5'-UTR,intron-Distal3.6799010.75905K562GTF2F1
chr33345079233450822-5'-UTR,CDS,intron-Distal3.549645.45876HepG2BCLAF1
chr33345093933450988-5'-UTR,CDS,intron-Distal,intron-Proximal3.080313.40321HepG2GRWD1
chr33345080733450838-5'-UTR,CDS,intron-Distal3.482364.06757K562UCHL5
chr33348161533481666-5'-UTR,intron-Distal3.926495.46194K562DHX30
chr33348132533481397-5'-UTR,CDS,intron-Distal,intron-Proximal3.444037.62107K562XRN2
chr33348161233481682-5'-UTR,intron-Distal3.453267.54621HepG2DDX3X
chr33348161233481669-5'-UTR,intron-Distal4.337756.32422K562DROSHA
chr33348177233481833-5'-UTR,intron-Distal3.356903.03570HepG2NCBP2
chr33348162633481671-5'-UTR,intron-Distal3.355214.26355K562XRCC6
chr33345307133453126-5'-UTR,CDS,intron-Distal,intron-Proximal4.533766.26332HepG2GRWD1
chr33348154233481672-5'-UTR,intron-Distal,intron-Proximal3.150605.17640HepG2DGCR8
chr33348167733481752-5'-UTR,intron-Distal3.075456.32377K562AKAP8L
chr33348145833481586-5'-UTR,intron-Distal,intron-Proximal3.6459613.33661K562GEMIN5
chr33348168233481768-5'-UTR,intron-Distal4.1134312.08786HepG2GTF2F1
chr33348163133481768-5'-UTR,intron-Distal3.135003.95966K562FUS
chr33348167733481751-5'-UTR,intron-Distal3.1123220.38994HepG2NKRF
chr33348168533481761-5'-UTR,intron-Distal4.050647.21663HepG2PCBP2
chr33348167033481767-5'-UTR,intron-Distal3.3739728.40133HepG2PRPF4
chr33348169733481748-5'-UTR,intron-Distal4.229723.58113K562EWSR1
chr33348162433481677-5'-UTR,intron-Distal4.056749.75242K562GEMIN5
chr33348176833481822-5'-UTR,intron-Distal4.891927.57617HepG2GTF2F1
chr33348161633481677-5'-UTR,intron-Distal3.869577.70655HepG2NKRF
chr33348168233481753-5'-UTR,intron-Distal3.450498.24771K562NCBP2
chr33348164633481696-5'-UTR,intron-Distal3.108623.99763K562SLTM
chr33345095333451015-5'-UTR,CDS,intron-Distal3.780774.66686K562DDX24
chr33345307333453180-5'-UTR,CDS,intron-Distal,intron-Proximal3.103108.83088K562DDX24
chr33348177233481829-5'-UTR,intron-Distal3.124956.26873HepG2PRPF4
chr33348160833481682-5'-UTR,intron-Distal4.755944.52011K562HNRNPM
chr33348152733481608-5'-UTR,intron-Distal,intron-Proximal3.554899.77789HepG2PRPF4
chr33348149133481608-5'-UTR,intron-Distal,intron-Proximal5.4098110.78967K562HNRNPM
chr33348159933481661-5'-UTR,intron-Distal,intron-Proximal5.365745.93845K562DDX24
chr33348160733481691-5'-UTR,intron-Distal4.4094411.02458HepG2CSTF2T
chr33345082233450838-5'-UTR,CDS,intron-Distal3.805354.17155HepG2BCLAF1
chr33348140433481509-5'-UTR,intron-Distal,intron-Proximal3.137196.39462HepG2PRPF4
chr33348134933481389-5'-UTR,intron-Distal,intron-Proximal3.516625.67297HepG2DDX3X
chr33345312633453179-5'-UTR,CDS,intron-Distal,intron-Proximal3.000964.89942HepG2GRWD1
chr33348167833481741-5'-UTR,intron-Distal3.4683629.58223K562GEMIN5
chr33348168133481741-5'-UTR,intron-Distal3.9557313.82711K562DDX24
chr33345098033451040-5'-UTR,CDS,intron-Distal3.881555.77244K562UCHL5
chr33348169533481761-5'-UTR,intron-Distal3.402556.76820HepG2XRN2
chr33345094133450980-5'-UTR,CDS,intron-Distal3.463304.40383K562UCHL5
chr33348167533481803-5'-UTR,intron-Distal3.067284.67518K562FAM120A
chr33345090033450950-5'-UTR,CDS,intron-Distal,intron-Proximal4.934965.01842HepG2PRPF8
chr33344168633441775-CDS,intron-Distal,intron-Proximal3.399725.39266HepG2GRWD1
chr33345072533450782-CDS,intron-Distal,intron-Proximal3.317637.55111K562UCHL5
chr33344245233442506-CDS,intron-Distal,intron-Proximal3.047744.96088HepG2GRWD1
chr33346715533467234-CDS,intron-Distal,intron-Proximal3.064035.44739HepG2GRWD1
chr33345421433454247-CDS,intron-Distal,intron-Proximal3.615265.45876HepG2BCLAF1
chr33345821233458300-CDS,intron-Distal,intron-Proximal4.470446.81564HepG2PRPF8
chr33345072133450761-CDS,intron-Distal,intron-Proximal3.041147.36535K562ZNF622
chr33346716933467239-CDS,intron-Distal,intron-Proximal4.037055.20093K562DDX24
chr33343839933438613-CDS,intron-Distal,intron-Proximal3.0394113.26920K562PRPF8
chr33344435433444454-CDS,intron-Distal,intron-Proximal4.800005.32906HepG2AQR
chr33345424733454318-CDS,intron-Distal,intron-Proximal3.3522010.13621HepG2BCLAF1
chr33345012533450183-CDS,intron-Distal,intron-Proximal4.2673611.27315K562AQR
chr33345824933458258-CDS,intron-Distal,intron-Proximal3.119344.26492HepG2BCLAF1
chr33345421233454256-CDS,intron-Distal,intron-Proximal3.220586.02988K562UCHL5
chr33344167533441687-CDS,intron-Distal,intron-Proximal5.083945.64484HepG2PRPF8
chr33345824833458271-CDS,intron-Distal,intron-Proximal3.510433.07653K562ZNF622
chr33343831833438379-CDS,intron-Distal,intron-Proximal3.635344.54121HepG2KHSRP
chr33344428633444354-CDS,intron-Distal,intron-Proximal3.182493.09957HepG2AQR
chr33344167633441689-CDS,intron-Distal,intron-Proximal4.6383311.05644K562PRPF8
chr33343859933438639-CDS,intron-Distal,intron-Proximal3.201345.94782HepG2U2AF2
chr33345421333454321-CDS,intron-Distal,intron-Proximal3.9527011.87021K562ZNF622
chr33344436033444424-CDS,intron-Distal,intron-Proximal4.068115.83621K562AQR
chr33346710233467155-CDS,intron-Distal4.474735.85983HepG2GRWD1
chr33345027133450291-CDS,intron-Distal,intron-Proximal3.970443.20743HepG2PPIG
chr33344436133444442-CDS,intron-Distal,intron-Proximal3.7096022.34117K562SF3B4
chr33348116833481239-CDS,intron-Distal,intron-Proximal3.764936.09306K562NONO
chr33343853833438589-CDS,intron-Distal3.848818.66838HepG2BCLAF1
chr33348115833481235-CDS,intron-Distal,intron-Proximal3.410683.89482K562CSTF2T
chr33348124133481288-CDS,intron-Distal3.806633.05875K562RBM15
chr33346717933467238-CDS,intron-Distal,intron-Proximal3.413806.68812HepG2BUD13
chr33343489033434949-CDS,intron-Distal,intron-Proximal3.037403.05068HepG2U2AF2
chr33347776333477846-intron-Distal3.458524.79415HepG2KHSRP
chr33345567033455713-intron-Distal4.967284.67693K562PTBP1
chr33343777233437834-intron-Distal,intron-Proximal5.249156.40247K562SF3B4
chr33347224933472312-intron-Distal4.113233.33944K562MATR3
chr33345567533455710-intron-Distal3.351333.30286HepG2PTBP1
chr33347157033471599-intron-Distal3.868963.24322HepG2MATR3
chr33343778233437886-intron-Distal,intron-Proximal3.6009410.39856K562KHSRP
chr33347850833478559-intron-Distal5.064767.71416K562EXOSC5
chr33343778533437892-intron-Distal,intron-Proximal4.2945612.92713HepG2KHSRP
chr33345068633450726-intron-Distal,intron-Proximal3.929354.49024K562AQR
chr33347228033472354-intron-Distal4.993156.80441HepG2MATR3
chr33347282733472874-intron-Distal4.701156.07481HepG2SUGP2
chr33348100633481086-intron-Distal3.408906.31832K562HNRNPM
chr33345415133454214-intron-Distal,intron-Proximal3.998104.49024K562AQR
chr33343841533438500-intron-Distal,intron-Proximal3.262197.02365HepG2KHSRP
chr33347283633472880-intron-Distal4.213444.31720HepG2MATR3
chr33348012633480160-intron-Distal3.878413.27946HepG2HNRNPM
chr33347262333472665-intron-Distal3.993073.72005K562MATR3
chr33347230033472347-intron-Distal4.394364.28571K562HNRNPM
chr33348090533480952-intron-Distal4.196273.30696K562EXOSC5
chr33343469533434776-intron-Distal,intron-Proximal4.888926.15361K562PRPF8
chr33347882633478893-intron-Distal5.082066.95924HepG2HNRNPM
chr33343473033434778-intron-Distal,intron-Proximal4.898265.70963K562RBM22
chr33347187233471923-intron-Distal3.001355.91066HepG2SUGP2
chr33347275733472786-intron-Distal3.025973.23296HepG2SUGP2
chr33343475633434784-intron-Distal,intron-Proximal3.129144.14287K562KHSRP
chr33343804833438108-intron-Distal,intron-Proximal4.4042217.06505K562KHSRP
chr33347222933472355-intron-Distal3.9997315.46749HepG2SUGP2
chr33347206333472116-intron-Distal4.129098.05781HepG2SUGP2
chr33344163233441676-intron-Distal,intron-Proximal5.7707212.78616K562PRPF8
chr33344470133444755-intron-Distal4.983056.50173HepG2U2AF2
chr33344984533449924-intron-Distal6.3838317.51626HepG2PCBP2
chr33348085633480915-intron-Distal4.579005.80843K562CSTF2T
chr33347859733478711-intron-Distal5.277578.45817HepG2QKI
chr33344445233444490-intron-Distal,intron-Proximal3.059574.76345K562KHSRP
chr33348099433481037-intron-Distal3.255543.73797K562CSTF2T
chr33346418533464287-intron-Distal3.098595.65555HepG2PTBP1
chr33348114033481211-intron-Distal,intron-Proximal4.454004.37625HepG2RBM22
chr33343796833438022-intron-Distal,intron-Proximal3.685136.75956HepG2U2AF2
chr33343429933434350-intron-Distal3.9853213.45898HepG2XPO5
chr33347768633477906-intron-Distal4.2971616.19264K562KHSRP
chr33347858033478629-intron-Distal4.157533.66668K562KHSRP
chr33347261533472731-intron-Distal4.583307.88692HepG2PTBP1
chr33344448833444560-intron-Distal,intron-Proximal4.340014.48843K562TIA1
chr33345573833455766-intron-Distal3.540863.89405HepG2PTBP1
chr33345571033455738-intron-Distal5.232318.48075HepG2PTBP1
chr33347222833472300-intron-Distal3.781828.23920K562HNRNPM
chr33345066833450721-intron-Distal,intron-Proximal4.580594.96013K562PRPF8
chr33347891033478935-intron-Distal4.118213.59917K562EXOSC5
chr33343840933438497-intron-Distal,intron-Proximal4.643427.43035HepG2EFTUD2
chr33347262633472727-intron-Distal5.530809.31798HepG2MATR3
chr33343810833438164-intron-Distal,intron-Proximal4.1152618.15244K562KHSRP
chr33347771433477763-intron-Distal4.220304.02395HepG2KHSRP
chr33347261433472710-intron-Distal5.387057.91717K562PTBP1
chr33344164433441675-intron-Distal,intron-Proximal5.089345.64484HepG2PRPF8
chr33347889333478943-intron-Distal3.982414.86210HepG2HNRNPM
chr33347187533471924-intron-Distal3.351263.39827HepG2MATR3
chr33347213833472196-intron-Distal3.986666.51675HepG2SUGP2
chr33343841133438522-intron-Distal,intron-Proximal3.7031913.17666K562KHSRP
chr33343811133438168-intron-Distal,intron-Proximal4.667925.07255HepG2KHSRP
chr33347860433478730-intron-Distal5.387626.85401K562QKI
chr33343816833438226-intron-Distal,intron-Proximal3.108723.42827HepG2KHSRP
chr33344233333442416-intron-Distal,intron-Proximal3.868263.24603K562KHSRP
chr33344925533449378-intron-Distal4.397025.30852HepG2HNRNPL
chr33345571333455763-intron-Distal3.701428.54900K562PTBP1
chr33345049833450568-intron-Distal4.861534.96013K562PRPF8
chr33347221333472333-intron-Distal5.219389.14097HepG2HNRNPM
chr33343186033431951-intron-Distal3.569204.94119K562SF3B4
chr33348004833480165-intron-Distal4.246107.03471K562HNRNPM
chr33343468733434730-intron-Distal,intron-Proximal3.657535.32884K562KHSRP
chr33343186833431916-intron-Distal3.819894.13733K562SMNDC1
chr33348098933481033-intron-Distal3.335214.25264K562NONO
chr33346417733464294-intron-Distal3.685529.26230HepG2PCBP2
chr33347796333478013-intron-Distal3.889543.47315HepG2CSTF2
chr33343473033434756-intron-Distal,intron-Proximal3.293727.02852K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for UBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for UBP1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of UBP1.  








The Knockdown/knockout RNA-Seq assay for UBP1 is not available on ENCORE database.





98 RBPs can affect the gene expression of UBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
UBP1ENSG00000153560.74234.315403159.955100.422103.563102.50080HepG2ABCF1
UBP1ENSG00000153560.71913.224102597.90030-0.441303.271202.69930HepG2AKAP1
UBP1ENSG00000153560.72059.184803453.99110-0.7462025.1345023.44740HepG2AUH
UBP1ENSG00000153560.72973.066804123.27220-0.471805.168304.38190HepG2BOP1
UBP1ENSG00000153560.73516.983102917.658500.269402.758801.98800HepG2CALR
UBP1ENSG00000153560.71925.923403538.95980-0.8778010.321708.46780HepG2CCAR1
UBP1ENSG00000153560.72511.742102945.17230-0.229702.770602.12800HepG2CELF1
UBP1ENSG00000153560.72667.911603167.02110-0.247404.527803.61460HepG2DAZAP1
UBP1ENSG00000153560.72433.446801846.919300.397804.016103.21280HepG2DDX21
UBP1ENSG00000153560.71563.357802488.75670-0.670806.091405.19820HepG2DDX3X
UBP1ENSG00000153560.71537.842502246.68970-0.546904.132503.20770HepG2DDX55
UBP1ENSG00000153560.71382.741402137.50560-0.628405.945405.06830HepG2DDX6
UBP1ENSG00000153560.72566.735602203.054000.220302.584101.92670HepG2DKC1
UBP1ENSG00000153560.71566.394902008.31120-0.358504.855603.94710HepG2DNAJC21
UBP1ENSG00000153560.72665.527802055.220900.375002.972302.35780HepG2EIF2S1
UBP1ENSG00000153560.72991.565902396.878400.319603.233301.96140HepG2EIF2S2
UBP1ENSG00000153560.73281.227902271.447000.530504.954304.10180HepG2EIF4A3
UBP1ENSG00000153560.72805.423602211.216900.343301.879901.30490HepG2EIF4B
UBP1ENSG00000153560.72473.674002992.87400-0.274902.190201.45930HepG2EIF4G2
UBP1ENSG00000153560.71143.923101480.58080-0.372203.866902.46160HepG2FAM120A
UBP1ENSG00000153560.72780.038402256.368200.301002.239301.44220HepG2G3BP2
UBP1ENSG00000153560.71564.044702060.68900-0.397802.860701.82390HepG2GNB2L1
UBP1ENSG00000153560.75419.214104291.348200.336602.597501.97420HepG2GPKOW
UBP1ENSG00000153560.72639.192902027.551800.380303.853803.10990HepG2HNRNPA1
UBP1ENSG00000153560.72383.811502910.46840-0.288004.285503.16410HepG2HNRNPA2B1
UBP1ENSG00000153560.72865.106202255.288700.345203.292302.54160HepG2HNRNPC
UBP1ENSG00000153560.72622.300402151.821800.285202.221101.59070HepG2HNRNPK
UBP1ENSG00000153560.72193.196802884.98600-0.3955010.032008.82270HepG2HNRNPL
UBP1ENSG00000153560.71858.990902240.37720-0.269203.638102.95150HepG2HNRNPU
UBP1ENSG00000153560.72628.351002160.883300.282401.928501.35540HepG2IGF2BP2
UBP1ENSG00000153560.73363.912002027.471000.730402.703101.73060HepG2IGF2BP3
UBP1ENSG00000153560.71927.598402288.46900-0.247603.943003.08300HepG2ILF2
UBP1ENSG00000153560.71463.475802104.91730-0.5244013.6769011.62940HepG2KIF1C
UBP1ENSG00000153560.73493.177802292.028700.607807.091706.05720HepG2MAGOH
UBP1ENSG00000153560.71868.655202359.31750-0.336402.217901.64850HepG2NCBP2
UBP1ENSG00000153560.72683.728303140.39890-0.226702.388301.68100HepG2NOL12
UBP1ENSG00000153560.72550.221702039.949400.322005.000004.22130HepG2PCBP1
UBP1ENSG00000153560.72710.661702309.139800.231202.813402.03500HepG2PRPF4
UBP1ENSG00000153560.72466.082202075.717600.248503.170702.59270HepG2PTBP1
UBP1ENSG00000153560.71763.798102345.45450-0.411208.347307.37650HepG2PUS1
UBP1ENSG00000153560.72928.489402248.068800.381405.329704.50400HepG2QKI
UBP1ENSG00000153560.72842.468303503.02040-0.301503.523702.56600HepG2RBM15
UBP1ENSG00000153560.74025.134003314.603800.280103.592303.02310HepG2RBM22
UBP1ENSG00000153560.72575.427102040.261100.336002.458801.81960HepG2RBM25
UBP1ENSG00000153560.73293.397602310.080400.5115011.9694010.99520HepG2NELFE
UBP1ENSG00000153560.72842.531102151.515000.401707.656606.70710HepG2RECQL
UBP1ENSG00000153560.73088.149702244.870300.460005.258604.17580HepG2RPS2
UBP1ENSG00000153560.71546.960502124.95260-0.458003.232701.82370HepG2SART3
UBP1ENSG00000153560.76526.536303475.318600.9091010.523909.14630HepG2SF3A3
UBP1ENSG00000153560.73042.480302161.102900.4934011.3204010.24970HepG2SF3B4
UBP1ENSG00000153560.72517.671902874.18680-0.191102.807402.10050HepG2SLBP
UBP1ENSG00000153560.72949.308104510.36050-0.612904.470003.46600HepG2SNRNP70
UBP1ENSG00000153560.74520.885703743.688200.272005.065704.44580HepG2SRFBP1
UBP1ENSG00000153560.73499.259002255.718300.6334020.1488019.11950HepG2SRSF1
UBP1ENSG00000153560.72904.705404361.38520-0.586405.508304.05260HepG2SRSF3
UBP1ENSG00000153560.74435.669103250.346900.4485011.6036010.69530HepG2SSB
UBP1ENSG00000153560.73082.148602027.512800.6041013.4523012.35350HepG2TAF15
UBP1ENSG00000153560.71465.554902196.40830-0.5837014.1134012.98040HepG2TRIM56
UBP1ENSG00000153560.72619.669803168.00070-0.274203.771602.56670HepG2UTP18
UBP1ENSG00000153560.73380.316602975.628600.183902.266601.71300HepG2UTP3
UBP1ENSG00000153560.73053.531402215.953900.462502.900301.81600HepG2XRCC6
UBP1ENSG00000153560.72944.571302278.812600.369708.232307.17720HepG2ZC3H8
UBP1ENSG00000153560.73775.657203389.696700.155502.243601.73640HepG2ZNF622
UBP1ENSG00000153560.73805.008203234.463500.234303.284402.67580K562AGGF1
UBP1ENSG00000153560.74222.653403365.572600.327203.166302.46670K562AKAP8L
UBP1ENSG00000153560.72419.152602898.06480-0.260603.952302.78870K562BCLAF1
UBP1ENSG00000153560.73386.759404694.41440-0.471005.333604.11180K562BOP1
UBP1ENSG00000153560.74577.767805471.61570-0.257303.690802.40430K562CPEB4
UBP1ENSG00000153560.73243.115904991.52970-0.6221012.8154011.11410K562CPSF6
UBP1ENSG00000153560.71624.456502198.61420-0.436606.343704.64640K562CSTF2
UBP1ENSG00000153560.73053.008003650.05340-0.257703.548402.17440K562DDX21
UBP1ENSG00000153560.71788.263002189.81190-0.292203.536801.48080K562DDX24
UBP1ENSG00000153560.71812.998402540.97700-0.4870010.062307.61120K562DDX27
UBP1ENSG00000153560.71677.516602066.68380-0.301002.828201.77510K562DDX3X
UBP1ENSG00000153560.74512.751303621.805900.317204.819203.61220K562DKC1
UBP1ENSG00000153560.73711.948504229.41220-0.188301.956301.33300K562EIF2S2
UBP1ENSG00000153560.72706.395002287.748400.242302.588501.81730K562EIF3G
UBP1ENSG00000153560.73871.200005109.62570-0.400403.012602.12500K562FIP1L1
UBP1ENSG00000153560.73268.586205078.72370-0.635809.724008.07330K562FMR1
UBP1ENSG00000153560.73179.229804304.65940-0.437202.686201.78480K562FTO
UBP1ENSG00000153560.73281.933402245.431600.5475012.3935011.20450K562FXR1
UBP1ENSG00000153560.73319.048704765.69870-0.521907.698106.36890K562GPKOW
UBP1ENSG00000153560.74659.065205636.46780-0.274802.635501.89700K562GRSF1
UBP1ENSG00000153560.72511.329903042.66620-0.276902.707901.64700K562HNRNPA1
UBP1ENSG00000153560.72858.325703369.44300-0.237302.604601.73740K562HNRNPU
UBP1ENSG00000153560.75316.239606927.99280-0.382002.713501.92650K562HSPD1
UBP1ENSG00000153560.73534.378402864.633700.303003.072302.18540K562MAGOH
UBP1ENSG00000153560.74749.876504001.335900.247302.086801.31270K562MBNL1
UBP1ENSG00000153560.73474.210304651.84690-0.421105.031203.83110K562METAP2
UBP1ENSG00000153560.75350.875706678.14000-0.319702.686401.57520K562MSI2
UBP1ENSG00000153560.73339.766803800.62630-0.186502.501701.73240K562MTPAP
UBP1ENSG00000153560.74028.577402804.636400.522402.545401.70700K562NAA15
UBP1ENSG00000153560.73313.951404222.98360-0.3497011.001009.64910K562NSUN2
UBP1ENSG00000153560.73335.670502548.951200.388004.279803.05770K562PCBP2
UBP1ENSG00000153560.74064.230805799.99860-0.513104.090703.06820K562PPIG
UBP1ENSG00000153560.78251.056906835.826100.271402.571101.78530K562PUF60
UBP1ENSG00000153560.75606.318303337.962900.7480012.6968011.58010K562PUS1
UBP1ENSG00000153560.74524.047903252.144400.476109.087608.03680K562RBM15
UBP1ENSG00000153560.73232.980702572.388500.329703.415802.20830K562SAFB
UBP1ENSG00000153560.71800.573102728.29670-0.599509.955708.62880K562SRSF1
UBP1ENSG00000153560.74482.989802895.658000.6305013.4176011.60570K562SYNCRIP
UBP1ENSG00000153560.72133.330802761.39530-0.372303.299902.52560K562TARDBP
UBP1ENSG00000153560.72144.788102663.63000-0.312603.184702.29790K562TIA1
UBP1ENSG00000153560.74452.571105978.88600-0.425202.992701.54040K562TRIP6
UBP1ENSG00000153560.73426.270404639.61300-0.437409.305506.95880K562TROVE2
UBP1ENSG00000153560.73053.026402198.273900.473804.172102.77080K562U2AF1
UBP1ENSG00000153560.72937.298102270.162700.371604.762903.71300K562U2AF2
UBP1ENSG00000153560.71872.395402550.26610-0.445802.225901.32030K562UCHL5
UBP1ENSG00000153560.73223.495303831.45170-0.249302.329401.52590K562WDR3
UBP1ENSG00000153560.74500.267603984.135300.175602.447901.64940K562WDR43
UBP1ENSG00000153560.74310.832905618.66410-0.382303.048402.13840K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for UBP1 is not available on ENCORE database.





44 RBPs can affect the splicing of UBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.127000.000620.05451includedHepG2G3BP1
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.317000.000000.00000includedHepG2G3BP1
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.083000.000200.06772includedK562IGF2BP2
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.139000.001500.02913includedK562SRSF1
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.135000.005600.08285excludedK562SRSF1
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.216000.000000.00009excludedK562PRPF8
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.087000.000000.00001excludedHepG2U2AF1
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.164000.000000.00390includedK562TROVE2
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.089000.000780.06389includedK562XRCC6
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.211000.000050.05151includedHepG2TROVE2
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.249000.000010.00370includedK562FMR1
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.089000.000250.05702excludedHepG2DKC1
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.242000.000000.00000includedHepG2HNRNPK
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.144000.000860.06758includedHepG2QKI
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.512000.000000.00000excludedHepG2U2AF2
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.064000.000000.00001excludedHepG2U2AF2
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.083000.005870.05301includedK562AQR
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450831-0.198000.000000.00001excludedK562AQR
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334378003343853633438627-0.366000.000030.00058excludedK562AQR
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.223000.000000.00020excludedK562FXR1
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.095000.000690.06142excludedHepG2SRSF7
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.112000.000000.00009excludedHepG2SRSF7
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.317000.000000.00038includedHepG2UCHL5
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.166000.000720.09634includedHepG2TIA1
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.165000.000090.01148includedK562SUPV3L1
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.218000.000000.00000excludedK562PUS1
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.074000.000140.03474includedK562MTPAP
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.348000.000700.03472excludedHepG2SFPQ
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.102000.000000.00265includedHepG2UPF1
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.162000.000190.06407includedK562UCHL5
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.240000.001070.06237includedHepG2FTO
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.082000.000300.02552includedHepG2FTO
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.205000.000000.00032excludedK562EFTUD2
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.181000.000000.00040includedHepG2MATR3
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.113000.001120.02475excludedK562U2AF1
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.334000.000000.00000excludedK562U2AF1
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.082000.001070.09126includedHepG2LARP4
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.208000.000010.00458includedHepG2RBM15
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.127000.000000.00069includedHepG2RBM15
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.086000.002760.06697excludedHepG2SF3A3
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.156000.000000.00000excludedHepG2SSB
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.102000.000110.01298includedHepG2IGF2BP3
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.305000.000110.01321includedHepG2IGF2BP3
SEUBP1ENSG00000153560.7chr3-3343793633438008334376533343777233438536334386270.120000.000010.00274includedK562HNRNPUL1
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.162000.000000.00104excludedHepG2TIAL1
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.095000.000000.00258excludedK562EIF4G2
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.119000.000150.03357excludedK562EIF4G2
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.115000.003370.08328excludedK562UTP18
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.193000.000020.00454includedHepG2TAF15
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.252000.000110.00312excludedK562U2AF2
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.095000.001140.04143excludedK562HNRNPU
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.170000.000000.00010excludedK562AGGF1
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.138000.000400.07170includedHepG2DDX55
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.169000.001600.05770includedK562SF3B1
SEUBP1ENSG00000153560.7chr3-334501813345028933444292334443963345072733450838-0.153000.000060.05261excludedK562SLBP
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.178000.000000.00006excludedHepG2HNRNPU
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.111000.001440.05157includedHepG2HNRNPC
SEUBP1ENSG00000153560.7chr3-334382363343837033437653334377723343853633438627-0.127000.000080.00505excludedHepG2HNRNPC
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.229000.000000.00052includedHepG2SRSF9
SEUBP1ENSG00000153560.7chr3-3345018133450289334442923344439633450727334508380.275000.000000.00000includedHepG2FUS
SEUBP1ENSG00000153560.7chr3-3343823633438370334376533343777233438536334386270.148000.000210.03753includedHepG2KHSRP
A3SSUBP1ENSG00000153560.7chr3-3345307233453224334530723345317933454213334542900.057000.000000.00000longerK562AQR
A3SSUBP1ENSG00000153560.7chr3-3345094033451180334509403345109333453072334531510.082000.000000.00000longerK562AQR
A3SSUBP1ENSG00000153560.7chr3-3346708133467284334670813346723333481227334814170.106000.000000.00000longerK562AQR
A3SSUBP1ENSG00000153560.7chr3-3343175733431945334317573343186033434054334341060.060000.000010.00007longerK562AQR
A3SSUBP1ENSG00000153560.7chr3-3343765333437875334376533343777233438536334386510.128000.000000.00000longerK562AQR
RIUBP1ENSG00000153560.7chr3-334376533343811333437653334377723343793633438113-0.722000.000000.00001excludedK562HNRNPUL1
MXEUBP1ENSG00000153560.7chr3-3345824933458326334670813346723333450940334510933348122733481870-0.056000.013210.079222includedK562AQR
MXEUBP1ENSG00000153560.7chr3-3343793633438008334382363343837033437653334377723343853633438627-0.189000.000300.061402includedK562EIF4G2
MXEUBP1ENSG00000153560.7chr3-3343793633438008334382363343837033437653334377723343853633438627-0.309000.002920.091472includedK562HNRNPU
MXEUBP1ENSG00000153560.7chr3-3343793633438008334382363343837033437653334377723343853633438627-0.243000.000110.004972includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for UBP1 is not avaliable on ENCORE database.