MSH2

General Information

Gene Name       : MSH2
Gene ID             : ENSG00000095002.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MSH2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MSH2ENSG00000095002.1446.3142.8944.60ENCSR000AEF
HepG2MSH2ENSG00000095002.1432.1158.7045.41ENCSR985KAT
K562MSH2ENSG00000095002.1481.3283.9882.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MSH2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MSH2 RNA is bound by 27 proteins.  







eCLIP assay for MSH2 is not avaliable on ENCORE database.





27 proteins are bound to MSH2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr24771025747710337+3'-UTR,intron-Distal4.2299010.90588K562LSM11
chr24771015747710209+3'-UTR,intron-Distal4.322734.55651HepG2SUB1
chr24771023447710319+3'-UTR,intron-Distal3.391044.25221HepG2LSM11
chr24771013747710231+3'-UTR,intron-Distal3.404807.66579K562PABPC4
chr24771027947710332+3'-UTR,intron-Distal4.133474.55651HepG2SUB1
chr24763031147630396+5'-UTR,CDS,intron-Proximal3.450697.69339K562FMR1
chr24763044447630516+5'-UTR,CDS,intron-Proximal3.501287.05348K562FXR2
chr24763028947630400+5'-UTR,CDS,intron-Proximal4.277938.41080HepG2PRPF4
chr24763031747630407+5'-UTR,CDS,intron-Proximal3.059977.15529HepG2PPIG
chr24770543647705499+CDS3.734976.23555K562LIN28B
chr24763040547630453+CDS,intron-Proximal3.097734.96117K562YBX3
chr24764343447643478+CDS,intron-Proximal3.003754.07132HepG2GRWD1
chr24764140747641427+CDS,intron-Proximal4.337627.53358HepG2BCLAF1
chr24770216347702171+CDS,intron-Proximal4.254075.36555HepG2BCLAF1
chr24763735647637410+CDS3.477103.64168HepG2RBM5
chr24765705147657079+CDS4.1400012.02158K562YBX3
chr24770215947702189+CDS,intron-Proximal4.148473.44423K562BUD13
chr24770796047708011+CDS,intron-Proximal3.397163.81692HepG2LIN28B
chr24770991747709960+CDS,intron-Distal,intron-Proximal5.381446.51488K562LIN28B
chr24763567747635694+CDS4.220396.22576HepG2BCLAF1
chr24770362347703660+CDS4.700365.08593K562FXR2
chr24769811847698156+CDS4.395027.97334HepG2BCLAF1
chr24763035047630390+CDS,intron-Proximal3.928595.38772K562RBM15
chr24763039247630438+CDS,intron-Proximal3.296434.06531HepG2GRWD1
chr24770237947702407+CDS3.080345.69345HepG2BCLAF1
chr24769379647693824+CDS,intron-Proximal3.100665.69345HepG2BCLAF1
chr24770796347708012+CDS,intron-Proximal5.9241312.57080K562LIN28B
chr24770217147702204+CDS3.452736.91872HepG2BCLAF1
chr24763964447639668+CDS3.763856.06436HepG2BCLAF1
chr24763747547637480+CDS3.872824.09885HepG2BCLAF1
chr24770356247703636+CDS3.6330413.26331HepG2BCLAF1
chr24770546447705555+CDS3.9103415.64247K562YBX3
chr24770350547703523+CDS,intron-Proximal3.424374.34695HepG2BCLAF1
chr24763731547637361+CDS4.1537610.78406HepG2BCLAF1
chr24765700947657067+CDS3.506194.24070HepG2GRWD1
chr24763039647630449+CDS,intron-Proximal4.162947.85254K562FMR1
chr24763966847639698+CDS4.8630911.47391HepG2BCLAF1
chr24770352147703599+CDS3.790093.36793K562FXR1
chr24764343447643481+CDS,intron-Proximal4.060603.19863HepG2EIF3D
chr24765703447657051+CDS3.9306910.51808K562YBX3
chr24770562947705658+CDS3.573826.76685K562YBX3
chr24763039047630443+CDS,intron-Proximal4.431929.04978K562RBM15
chr24763736147637410+CDS4.2502612.93761HepG2BCLAF1
chr24770360147703700+CDS5.6821923.65420K562LIN28B
chr24763039647630496+CDS,intron-Proximal3.697874.35138HepG2NCBP2
chr24764343547643475+CDS3.211865.69345HepG2BCLAF1
chr24765701947657051+CDS4.250267.49468HepG2BCLAF1
chr24764344247643475+CDS4.044883.89948K562YBX3
chr24770360647703691+CDS3.773404.91603HepG2LIN28B
chr24763728647637364+CDS5.254997.23011HepG2EIF3H
chr24763746347637502+CDS3.903543.04123K562LIN28B
chr24770360747703659+CDS5.147858.32209K562FMR1
chr24767273247672790+CDS3.146609.33743HepG2BCLAF1
chr24770354547703601+CDS4.012266.01926K562LIN28B
chr24774776747747835+intron-Distal4.430535.01506HepG2HLTF
chr24770743347707512+intron-Distal3.490085.22669HepG2ILF3
chr24769399547694108+intron-Distal,intron-Proximal4.439564.55788HepG2QKI
chr24770739647707490+intron-Distal5.160465.88499HepG2DDX59
chr24770737047707508+intron-Distal6.7358718.66063HepG2PCBP2
chr24769597547696052+intron-Distal3.685563.30744K562PTBP1
chr24770743047707526+intron-Distal4.211804.27402K562CSTF2T
chr24768916047689261+intron-Distal6.3779017.51063K562PTBP1
chr24768916647689243+intron-Distal4.228117.03179HepG2PTBP1
chr24774101947741124+intron-Distal3.847526.23177HepG2SUGP2
chr24774798947748050+intron-Distal4.397663.75568K562SLTM
chr24774061347740706+intron-Distal4.296258.66162HepG2SUGP2
chr24770743547707524+intron-Distal4.315798.35855K562ILF3
chr24770715547707370+intron-Distal5.6167711.58605HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MSH2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MSH2 is not available on ENCORE database.

  • 131 RBPs can affect the levels of MSH2.  








The Knockdown/knockout RNA-Seq assay for MSH2 is not available on ENCORE database.





131 RBPs can affect the gene expression of MSH2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MSH2ENSG00000095002.81113.750501364.19050-0.292603.558102.88390HepG2ACO1
MSH2ENSG00000095002.8888.797301374.61910-0.629105.065004.01730HepG2ASCC1
MSH2ENSG00000095002.81372.340501988.24330-0.5349010.712309.50850HepG2AUH
MSH2ENSG00000095002.8927.283701574.26480-0.763607.099705.56050HepG2BCCIP
MSH2ENSG00000095002.8794.009301368.03240-0.784906.145504.86620HepG2BCLAF1
MSH2ENSG00000095002.8616.417601041.90090-0.757209.280308.26600HepG2BOP1
MSH2ENSG00000095002.8902.886601332.24300-0.561207.446506.26350HepG2CALR
MSH2ENSG00000095002.8756.399501363.86370-0.8505024.2137022.68840HepG2CKAP4
MSH2ENSG00000095002.8557.75980956.50210-0.778108.775707.61150HepG2CPSF6
MSH2ENSG00000095002.8766.179101034.48410-0.433203.734302.45310HepG2CPSF7
MSH2ENSG00000095002.81442.370701963.60380-0.445107.185806.24200HepG2CELF1
MSH2ENSG00000095002.81259.532402111.40980-0.7453025.2285023.41470HepG2DAZAP1
MSH2ENSG00000095002.81054.614501261.66690-0.258602.932602.07640HepG2DDX19B
MSH2ENSG00000095002.81178.717601591.49480-0.433202.665302.05000HepG2DDX3X
MSH2ENSG00000095002.8848.371801547.76710-0.867409.073207.76600HepG2DDX55
MSH2ENSG00000095002.8823.949101132.51850-0.458903.850702.66590HepG2DDX5
MSH2ENSG00000095002.8525.096501366.83500-1.3802015.3243014.03090HepG2DDX6
MSH2ENSG00000095002.81050.592701305.15280-0.313003.439602.69540HepG2DKC1
MSH2ENSG00000095002.8747.955001018.47910-0.445404.642703.75180HepG2DNAJC21
MSH2ENSG00000095002.8658.989301009.38600-0.6152010.744809.55740HepG2DNAJC2
MSH2ENSG00000095002.8672.04980932.58170-0.472703.648002.36460HepG2EFTUD2
MSH2ENSG00000095002.8418.952701314.26140-1.6494018.3744016.94050HepG2EIF2S1
MSH2ENSG00000095002.8540.24450908.12420-0.749307.116605.72840HepG2EIF3D
MSH2ENSG00000095002.8888.522501452.55350-0.709105.666304.75090HepG2EIF4A3
MSH2ENSG00000095002.81294.683301995.37860-0.624107.975106.62350HepG2EIF4G2
MSH2ENSG00000095002.81583.046902282.69030-0.5280010.872709.80840HepG2ETF1
MSH2ENSG00000095002.8612.30570811.67170-0.406603.580902.23270HepG2FAM120A
MSH2ENSG00000095002.81001.224501268.35130-0.341201.982301.32450HepG2FIP1L1
MSH2ENSG00000095002.8595.69830958.18240-0.685702.629501.64040HepG2FTO
MSH2ENSG00000095002.81010.661101359.35670-0.427602.549801.90960HepG2G3BP1
MSH2ENSG00000095002.81018.555001430.38620-0.489903.908202.69450HepG2GNB2L1
MSH2ENSG00000095002.8793.169901084.21590-0.451003.089302.41740HepG2GPKOW
MSH2ENSG00000095002.81047.561301302.39310-0.314103.695002.57800HepG2HDGF
MSH2ENSG00000095002.8702.919301028.23530-0.548705.463604.59960HepG2HNRNPA1
MSH2ENSG00000095002.81519.276001940.42020-0.353005.070303.86790HepG2HNRNPA2B1
MSH2ENSG00000095002.8701.572601143.68860-0.705008.475007.31410HepG2HNRNPC
MSH2ENSG00000095002.8712.754601032.20490-0.534307.955206.81520HepG2HNRNPF
MSH2ENSG00000095002.81047.328001375.95090-0.393702.564901.89140HepG2HNRNPK
MSH2ENSG00000095002.81616.864801923.34900-0.250403.711902.93890HepG2HNRNPL
MSH2ENSG00000095002.8633.372101034.69200-0.708107.340406.37280HepG2HNRNPLL
MSH2ENSG00000095002.8745.852001016.42120-0.446504.723003.79960HepG2IGF2BP1
MSH2ENSG00000095002.8780.976801381.83570-0.823206.968305.94430HepG2IGF2BP2
MSH2ENSG00000095002.8842.400501160.52450-0.462207.349606.21580HepG2ILF2
MSH2ENSG00000095002.8944.693301247.02230-0.400606.235304.73430HepG2KIF1C
MSH2ENSG00000095002.81070.274701750.81370-0.710006.500905.21760HepG2LARP4
MSH2ENSG00000095002.81105.974001401.18700-0.341302.527601.44570HepG2LARP7
MSH2ENSG00000095002.8556.55880950.42170-0.772004.853503.48430HepG2METAP2
MSH2ENSG00000095002.81744.458002093.66670-0.263302.642701.89760HepG2NOL12
MSH2ENSG00000095002.8825.501701343.85200-0.703005.533604.52440HepG2PABPC4
MSH2ENSG00000095002.8903.877401124.61520-0.315203.288702.37280HepG2PARN
MSH2ENSG00000095002.8906.663101328.79010-0.551509.640008.61720HepG2PCBP1
MSH2ENSG00000095002.8879.357001487.79040-0.758705.987204.50600HepG2PCBP2
MSH2ENSG00000095002.8850.390801013.34260-0.252902.030201.39010HepG2PPIL4
MSH2ENSG00000095002.8553.523501194.31530-1.1095015.2545013.57850HepG2PRPF8
MSH2ENSG00000095002.81260.846801998.57320-0.6646010.255309.20540HepG2PUF60
MSH2ENSG00000095002.81630.231802121.55620-0.380007.964407.06560HepG2PUM1
MSH2ENSG00000095002.81649.384102120.01740-0.362104.239603.42020HepG2PUM2
MSH2ENSG00000095002.81163.842101464.38510-0.331403.431902.74660HepG2QKI
MSH2ENSG00000095002.8993.515401435.72800-0.531202.572701.89180HepG2RAVER1
MSH2ENSG00000095002.81024.162801364.16790-0.413604.674103.59520HepG2RBM15
MSH2ENSG00000095002.81582.583001907.92320-0.269702.912102.38410HepG2RBM22
MSH2ENSG00000095002.8471.728301003.10510-1.088403.570701.68720HepG2RBM39
MSH2ENSG00000095002.81619.626501401.412400.208701.909201.38400HepG2RECQL
MSH2ENSG00000095002.8519.049201112.02650-1.0992019.1356017.66240HepG2RPLP0
MSH2ENSG00000095002.8819.439901410.36680-0.783406.057704.69370HepG2RPS10
MSH2ENSG00000095002.8392.94290883.66520-1.1692019.9420018.52410HepG2RPS19
MSH2ENSG00000095002.8999.246801558.28750-0.641007.077805.83730HepG2RPS2
MSH2ENSG00000095002.8630.929001181.45830-0.905009.532208.19990HepG2RRP9
MSH2ENSG00000095002.8583.796401011.79320-0.7934016.1428014.78000HepG2SAFB2
MSH2ENSG00000095002.8573.85760886.86350-0.628005.823004.47230HepG2SERBP1
MSH2ENSG00000095002.8777.821101024.10970-0.396903.003602.26950HepG2SF3B1
MSH2ENSG00000095002.81493.638201916.28410-0.359506.436505.43760HepG2SLBP
MSH2ENSG00000095002.81007.993601179.95470-0.227202.404301.79890HepG2SMN1
MSH2ENSG00000095002.81002.251301464.02910-0.546703.761602.63250HepG2SMNDC1
MSH2ENSG00000095002.8529.82220985.33480-0.895102.870501.53200HepG2SNRNP200
MSH2ENSG00000095002.81090.638402154.95810-0.9825036.4416035.16440HepG2SRFBP1
MSH2ENSG00000095002.82534.167301469.339900.7862025.0829023.97070HepG2SRSF1
MSH2ENSG00000095002.81550.838901973.27890-0.347505.244704.42520HepG2SRSF5
MSH2ENSG00000095002.8630.865101014.12780-0.6848012.3800011.09030HepG2SRSF7
MSH2ENSG00000095002.8728.132501195.36560-0.7152015.1117014.00660HepG2SRSF9
MSH2ENSG00000095002.8592.80390847.23700-0.515203.081101.78290HepG2STAU1
MSH2ENSG00000095002.8951.421301341.72880-0.495902.678901.49650HepG2SUB1
MSH2ENSG00000095002.81960.460702244.17970-0.195002.418601.82940HepG2SUCLG1
MSH2ENSG00000095002.8566.25360856.51020-0.597005.925904.57730HepG2SUPT6H
MSH2ENSG00000095002.8679.452201540.87630-1.1813016.7585015.33990HepG2SUPV3L1
MSH2ENSG00000095002.8593.201901008.64700-0.765808.932807.73550HepG2TARDBP
MSH2ENSG00000095002.8775.695301032.85510-0.413102.417801.47830HepG2TFIP11
MSH2ENSG00000095002.81008.677301213.55290-0.266802.088801.35950HepG2TIA1
MSH2ENSG00000095002.8422.354901104.08620-1.3863034.2302032.83050HepG2TIAL1
MSH2ENSG00000095002.8590.362301113.82290-0.9158021.7118020.31970HepG2TRIM56
MSH2ENSG00000095002.8471.55580721.59980-0.613804.339402.39030HepG2TROVE2
MSH2ENSG00000095002.81613.765401952.49270-0.274902.369201.56580HepG2TUFM
MSH2ENSG00000095002.8833.498201085.03100-0.380502.607601.99680HepG2U2AF1
MSH2ENSG00000095002.8497.563101147.47370-1.205504.208202.97880HepG2U2AF2
MSH2ENSG00000095002.81501.534202066.66400-0.460903.834302.84250HepG2UBE2L3
MSH2ENSG00000095002.8655.19680910.31010-0.474403.255502.43310HepG2UCHL5
MSH2ENSG00000095002.8741.861801279.85020-0.7868018.1616016.67770HepG2UPF1
MSH2ENSG00000095002.81178.384401578.94490-0.422202.377701.39580HepG2XRCC6
MSH2ENSG00000095002.81191.543501516.82080-0.348201.967701.34850HepG2XRN2
MSH2ENSG00000095002.81002.71690821.740500.287102.882902.19960HepG2ZC3H8
MSH2ENSG00000095002.8612.383501407.58950-1.2007046.3657044.83430HepG2ZNF622
MSH2ENSG00000095002.83727.574706965.01820-0.9019020.3904018.96950K562AQR
MSH2ENSG00000095002.81808.939402545.64250-0.492905.286004.06840K562BOP1
MSH2ENSG00000095002.8946.494401365.20120-0.528403.616102.37490K562CCAR1
MSH2ENSG00000095002.81979.952702706.73800-0.451106.070704.91300K562CPSF6
MSH2ENSG00000095002.82826.887903426.93020-0.277704.117302.48560K562DDX27
MSH2ENSG00000095002.82578.743803579.02780-0.472906.716905.00700K562DDX3X
MSH2ENSG00000095002.83880.487905166.51910-0.413009.379108.26520K562DDX47
MSH2ENSG00000095002.84602.784703983.603800.208302.449601.63160K562DKC1
MSH2ENSG00000095002.82326.913903463.33680-0.573707.008305.50290K562EFTUD2
MSH2ENSG00000095002.82808.483603931.29530-0.4852011.529909.02380K562EIF2S1
MSH2ENSG00000095002.83058.611304684.95980-0.6152016.6780015.13370K562EIF2S2
MSH2ENSG00000095002.8968.411101388.70230-0.520002.572201.60530K562EIF3A
MSH2ENSG00000095002.82546.964803708.67410-0.542104.819503.40690K562EIF3D
MSH2ENSG00000095002.82971.002703575.42130-0.267203.425302.54610K562EIF3G
MSH2ENSG00000095002.82059.608103739.21630-0.8604017.5059015.29760K562EIF4A3
MSH2ENSG00000095002.82700.369503367.38210-0.318504.118002.65930K562EIF4B
MSH2ENSG00000095002.87089.495208255.52510-0.219702.824801.87730K562EIF4G2
MSH2ENSG00000095002.82011.834302549.58880-0.341802.548301.47360K562FKBP4
MSH2ENSG00000095002.81827.139102754.06180-0.592007.706006.23530K562FMR1
MSH2ENSG00000095002.81416.546002334.32450-0.720609.238507.46670K562FTO
MSH2ENSG00000095002.85352.121203880.509400.463803.455102.64770K562G3BP2
MSH2ENSG00000095002.81707.915202584.26040-0.597508.694407.27960K562GPKOW
MSH2ENSG00000095002.83505.288606243.32470-0.8328020.3785018.21800K562GRSF1
MSH2ENSG00000095002.83980.279504814.98920-0.274702.884001.78830K562HNRNPA1
MSH2ENSG00000095002.81152.171702936.43490-1.3497042.5303040.27460K562HNRNPC
MSH2ENSG00000095002.82017.529002622.30560-0.378203.987702.58580K562HNRNPF
MSH2ENSG00000095002.83755.009204669.15540-0.314303.363202.18400K562HNRNPL
MSH2ENSG00000095002.83589.845004821.59940-0.425604.644703.61900K562HSPD1
MSH2ENSG00000095002.83647.640604822.43960-0.402804.573902.95750K562IGF2BP3
MSH2ENSG00000095002.81393.871402206.65790-0.662805.896104.47540K562KRR1
MSH2ENSG00000095002.83695.584504983.92200-0.431504.872103.74930K562MAGOH
MSH2ENSG00000095002.81785.154202522.53000-0.498806.609705.22770K562METAP2
MSH2ENSG00000095002.87090.519908799.68700-0.311602.720701.60240K562MSI2
MSH2ENSG00000095002.83153.084403814.40340-0.274704.675203.64610K562MTPAP
MSH2ENSG00000095002.82920.307303733.81080-0.354504.547602.95860K562NCBP2
MSH2ENSG00000095002.83738.623704238.16010-0.180903.492702.66400K562NSUN2
MSH2ENSG00000095002.82157.419602891.30160-0.422403.495301.82340K562NUSAP1
MSH2ENSG00000095002.83919.007204870.86970-0.313703.431001.92170K562PCBP1
MSH2ENSG00000095002.82216.899102866.92260-0.371003.639501.97730K562PHF6
MSH2ENSG00000095002.82700.424703370.21300-0.319702.514401.79900K562PRPF8
MSH2ENSG00000095002.81651.476402632.83980-0.6729010.550908.53870K562PSIP1
MSH2ENSG00000095002.87277.215209007.49660-0.307703.149702.28180K562PUF60
MSH2ENSG00000095002.86697.845409387.39900-0.4870011.820509.83360K562PUM2
MSH2ENSG00000095002.84582.073003671.375000.319602.962802.40430K562PUS1
MSH2ENSG00000095002.84242.807103577.120500.246102.890402.28540K562RBM15
MSH2ENSG00000095002.83309.395204643.98920-0.488804.926303.76500K562RBM22
MSH2ENSG00000095002.83523.709004526.20630-0.361203.195501.66810K562RBM34
MSH2ENSG00000095002.82179.519703433.29630-0.655607.057605.73720K562RPS19
MSH2ENSG00000095002.81687.655802509.08190-0.572106.528804.91010K562RPS3
MSH2ENSG00000095002.81927.820302457.75360-0.350402.507701.58360K562SF3B1
MSH2ENSG00000095002.81587.619602277.22450-0.520406.342504.61290K562SRFBP1
MSH2ENSG00000095002.81761.177202422.52530-0.460005.030703.53870K562SRSF4
MSH2ENSG00000095002.83208.039204482.28510-0.482504.355702.99110K562SRSF5
MSH2ENSG00000095002.82030.989003263.72940-0.684306.695905.06110K562SUPV3L1
MSH2ENSG00000095002.83231.217304804.33930-0.572304.737003.80360K562TARDBP
MSH2ENSG00000095002.83128.612504046.66540-0.371203.700101.84400K562TBRG4
MSH2ENSG00000095002.83421.916004634.20670-0.437505.110603.94610K562TIA1
MSH2ENSG00000095002.81711.453802532.34080-0.565206.091504.64530K562TIAL1
MSH2ENSG00000095002.83765.747804546.44320-0.271802.351301.36160K562TRA2A
MSH2ENSG00000095002.81859.336502690.38260-0.533006.817105.17820K562TRIM56
MSH2ENSG00000095002.83593.758704466.81230-0.313803.648702.18020K562TROVE2
MSH2ENSG00000095002.88357.6739010155.18140-0.281002.710301.32400K562UBE2L3
MSH2ENSG00000095002.82459.668603453.93800-0.489805.086303.66070K562UCHL5
MSH2ENSG00000095002.83261.692304493.80980-0.4623012.6984011.29800K562UPF1
MSH2ENSG00000095002.83409.662903998.56180-0.229903.831002.84600K562WDR43
MSH2ENSG00000095002.82740.295603516.57340-0.359802.919001.67010K562XRN2
MSH2ENSG00000095002.86497.537007846.23880-0.272102.528301.71060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MSH2 is not available on ENCORE database.





4 RBPs can affect the splicing of MSH2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMSH2ENSG00000095002.8chr2+476414074764155747639552476396994764343447643568-0.065000.001500.02921excludedK562SF3B4
SEMSH2ENSG00000095002.8chr2+476414074764155747639552476396994764343447643568-0.257000.007060.06965excludedHepG2U2AF2
SEMSH2ENSG00000095002.8chr2+476414074764155747639552476396994764343447643568-0.153000.000810.07573excludedHepG2LARP4
SEMSH2ENSG00000095002.8chr2+4770991747710111477078344770801047739441477395590.079000.001400.03360includedHepG2SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MSH2 is not avaliable on ENCORE database.