KPNA3

General Information

Gene Name       : KPNA3
Gene ID             : ENSG00000102753.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: KPNA3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KPNA3ENSG00000102753.940.4134.3537.38ENCSR000AEF
HepG2KPNA3ENSG00000102753.922.2738.5330.40ENCSR985KAT
K562KPNA3ENSG00000102753.914.2315.7314.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KPNA3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KPNA3 RNA is bound by 9 proteins.  







eCLIP assay for KPNA3 is not avaliable on ENCORE database.





9 proteins are bound to KPNA3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr135030710750307183-CDS,intron-Distal,intron-Proximal4.821186.29310K562ZNF622
chr135036648450366586-CDS,intron-Distal4.1100910.32997HepG2PRPF8
chr135030709450307162-CDS,intron-Distal3.635435.56491HepG2BCLAF1
chr135027985150279914-CDS,intron-Distal,intron-Proximal3.913103.43253K562YBX3
chr135036657350366610-CDS,intron-Distal3.475843.61259K562ZNF622
chr135032110550321129-CDS,intron-Distal4.098873.77023K562ZNF622
chr135035970050359741-intron-Distal3.804793.29248HepG2SUGP2
chr135036113450361197-intron-Distal3.924905.64899HepG2PCBP2
chr135028761850287678-intron-Distal3.132514.10408K562KHSRP
chr135035911250359222-intron-Distal3.309764.53157HepG2MATR3
chr135030116450301291-intron-Distal5.539276.23225K562QKI
chr135028734950287449-intron-Distal4.191834.76003K562KHSRP
chr135035925150359334-intron-Distal4.138503.54208HepG2SUGP2
chr135035976850359825-intron-Distal4.058034.10336HepG2SUGP2
chr135032599850326046-intron-Distal4.025973.84389HepG2SUGP2
chr135030125050301295-intron-Distal4.294804.51735HepG2QKI
chr135028756050287617-intron-Distal3.954684.07352K562KHSRP
chr135030117050301250-intron-Distal5.311646.93116HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KPNA3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KPNA3 is not available on ENCORE database.

  • 131 RBPs can affect the levels of KPNA3.  








The Knockdown/knockout RNA-Seq assay for KPNA3 is not available on ENCORE database.





131 RBPs can affect the gene expression of KPNA3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KPNA3ENSG00000102753.51374.69340990.235200.473204.562303.21860HepG2AATF
KPNA3ENSG00000102753.52766.469501452.319100.929608.871707.33040HepG2ABCF1
KPNA3ENSG00000102753.52704.968401205.755801.1656057.6959055.81080HepG2ACO1
KPNA3ENSG00000102753.52443.835401429.730800.773308.762107.87660HepG2AKAP1
KPNA3ENSG00000102753.51322.63560945.674200.483903.726302.52680HepG2AKAP8
KPNA3ENSG00000102753.52002.566701211.420100.725108.788307.51980HepG2AKAP8L
KPNA3ENSG00000102753.5767.908501183.01610-0.623505.856504.73640HepG2ASCC1
KPNA3ENSG00000102753.51666.990402315.48190-0.474104.220703.40460HepG2AUH
KPNA3ENSG00000102753.51297.166001801.01870-0.473503.336002.30700HepG2BCCIP
KPNA3ENSG00000102753.51005.364301564.99310-0.638406.117404.84100HepG2BCLAF1
KPNA3ENSG00000102753.51584.602501205.493000.394406.862305.89950HepG2CKAP4
KPNA3ENSG00000102753.51573.942002331.33380-0.566803.094902.37260HepG2CPSF6
KPNA3ENSG00000102753.51072.337001409.69830-0.394602.981701.92400HepG2YBX3
KPNA3ENSG00000102753.51557.269101112.546400.485105.046703.65310HepG2CSTF2
KPNA3ENSG00000102753.52214.305701791.118500.305903.790203.06010HepG2CELF1
KPNA3ENSG00000102753.51141.366201926.05430-0.7549025.1693023.35790HepG2DAZAP1
KPNA3ENSG00000102753.51738.490901115.151000.6405016.9083015.24960HepG2DDX19B
KPNA3ENSG00000102753.51118.684901411.75950-0.335703.092201.87360HepG2DDX1
KPNA3ENSG00000102753.52435.368201093.144801.1556027.1922025.39280HepG2DDX21
KPNA3ENSG00000102753.51775.430901069.216400.7315012.3250010.45970HepG2DDX24
KPNA3ENSG00000102753.52290.625301770.750200.371302.653501.89340HepG2DDX55
KPNA3ENSG00000102753.51466.707301153.581300.346404.383803.56780HepG2DKC1
KPNA3ENSG00000102753.5769.401501384.35160-0.8474012.7200011.30220HepG2DNAJC21
KPNA3ENSG00000102753.5998.009701371.93330-0.459105.280504.42450HepG2DNAJC2
KPNA3ENSG00000102753.52155.78350949.752201.1825023.1409020.95040HepG2EEF2
KPNA3ENSG00000102753.51154.75850791.795800.544305.037103.54130HepG2EFTUD2
KPNA3ENSG00000102753.5708.497601131.05600-0.674806.573305.68300HepG2EIF2S1
KPNA3ENSG00000102753.51132.72570771.008500.554904.851903.68010HepG2EIF3D
KPNA3ENSG00000102753.51592.169501031.958600.625509.136607.40490HepG2EIF3G
KPNA3ENSG00000102753.51731.097101250.032000.469603.623902.89450HepG2EIF4A3
KPNA3ENSG00000102753.52591.514001216.924701.0905013.4350011.98390HepG2EIF4B
KPNA3ENSG00000102753.5900.731501820.13330-1.0149018.6737016.69810HepG2EIF4G2
KPNA3ENSG00000102753.51784.315001178.238200.598602.280101.52250HepG2EWSR1
KPNA3ENSG00000102753.52390.386501801.811400.407703.115501.36310HepG2FMR1
KPNA3ENSG00000102753.51346.440002335.14620-0.794403.651502.47920HepG2FTO
KPNA3ENSG00000102753.5439.63950602.76150-0.455303.164902.32770HepG2FUBP3
KPNA3ENSG00000102753.51876.584601368.459700.455502.713801.60700HepG2FUS
KPNA3ENSG00000102753.51878.498101260.981200.574904.824903.92780HepG2FXR1
KPNA3ENSG00000102753.51583.177401169.875800.436402.099801.51670HepG2G3BP1
KPNA3ENSG00000102753.51584.905101241.802200.351902.562401.70780HepG2G3BP2
KPNA3ENSG00000102753.51624.18970686.489801.2423023.5484021.28270HepG2GEMIN5
KPNA3ENSG00000102753.53753.203602642.990300.505905.009004.16420HepG2GPKOW
KPNA3ENSG00000102753.51056.043601554.52040-0.557805.262904.33030HepG2HNRNPC
KPNA3ENSG00000102753.51254.572402549.72240-1.0231038.1031035.98000HepG2HNRNPF
KPNA3ENSG00000102753.5995.100401754.53720-0.8182026.9124025.06120HepG2HNRNPL
KPNA3ENSG00000102753.51462.428002522.23250-0.786304.946804.13010HepG2HNRNPLL
KPNA3ENSG00000102753.51736.210601012.267000.7783014.4644012.57740HepG2HNRNPM
KPNA3ENSG00000102753.51199.404902510.76590-1.0658029.0042026.96460HepG2IGF2BP1
KPNA3ENSG00000102753.51599.506001189.199700.427503.543902.78940HepG2IGF2BP2
KPNA3ENSG00000102753.52130.803501115.825200.933202.777201.79370HepG2IGF2BP3
KPNA3ENSG00000102753.51275.537401577.40880-0.306502.521401.81780HepG2ILF2
KPNA3ENSG00000102753.5773.514701102.21150-0.510908.798507.07020HepG2KIF1C
KPNA3ENSG00000102753.53331.829302403.340800.471203.062502.18540HepG2LARP4
KPNA3ENSG00000102753.51596.265501087.517100.553606.249104.56600HepG2LARP7
KPNA3ENSG00000102753.51953.623401261.420300.631006.792405.77920HepG2MAGOH
KPNA3ENSG00000102753.51341.14540920.830000.542405.035502.89730HepG2MARK2
KPNA3ENSG00000102753.52810.565801268.520801.1476010.246409.09340HepG2MATR3
KPNA3ENSG00000102753.51409.31330806.945100.804405.921704.42850HepG2METAP2
KPNA3ENSG00000102753.51945.517201187.560500.712108.063806.74880HepG2MSI2
KPNA3ENSG00000102753.51447.289802571.82070-0.829405.808804.37950HepG2MTPAP
KPNA3ENSG00000102753.51499.336501909.86280-0.349104.237703.29390HepG2NOL12
KPNA3ENSG00000102753.51481.298102236.26590-0.594203.468802.62970HepG2NSUN2
KPNA3ENSG00000102753.51413.85800895.376100.659003.801702.74710HepG2PABPC1
KPNA3ENSG00000102753.5938.618201099.25810-0.227902.018701.48700HepG2PCBP1
KPNA3ENSG00000102753.5782.144501377.35670-0.8164012.4122010.91980HepG2PPIL4
KPNA3ENSG00000102753.5699.450001342.31050-0.9404023.9368022.07450HepG2PRPF4
KPNA3ENSG00000102753.52423.253801361.821500.831307.224705.34300HepG2PRPF6
KPNA3ENSG00000102753.51812.523801366.130600.407803.405102.51730HepG2PRPF8
KPNA3ENSG00000102753.51848.544401118.503800.7247017.4336016.28780HepG2PTBP1
KPNA3ENSG00000102753.52462.199001823.086100.433503.083302.46020HepG2PUF60
KPNA3ENSG00000102753.52257.765101935.233700.222303.017302.40400HepG2PUM1
KPNA3ENSG00000102753.51558.746701211.436400.363603.832303.11330HepG2QKI
KPNA3ENSG00000102753.53810.701401250.106701.6079020.4009018.65720HepG2RAVER1
KPNA3ENSG00000102753.51767.682401311.378000.430703.637802.49290HepG2RBM27
KPNA3ENSG00000102753.51693.477801064.897600.669206.969205.29310HepG2RCC2
KPNA3ENSG00000102753.53520.200101244.814301.4996084.3308082.40740HepG2NELFE
KPNA3ENSG00000102753.51602.119701159.326400.466607.438506.50050HepG2RECQL
KPNA3ENSG00000102753.52175.137502746.41850-0.336402.976502.27070HepG2RPLP0
KPNA3ENSG00000102753.51679.68820750.207301.1627026.7328025.14490HepG2RPS19
KPNA3ENSG00000102753.52093.319501209.422700.7914011.377309.84660HepG2RPS2
KPNA3ENSG00000102753.51956.872801234.574600.664408.165106.32340HepG2RPS5
KPNA3ENSG00000102753.51984.331401360.102000.544803.373801.68500HepG2RTF1
KPNA3ENSG00000102753.5641.557201375.25870-1.1001015.7339014.38580HepG2SAFB2
KPNA3ENSG00000102753.51490.62570752.978200.9851015.5649013.45380HepG2SERBP1
KPNA3ENSG00000102753.52641.453601315.403501.0057011.8267010.37340HepG2SF3A3
KPNA3ENSG00000102753.51365.704302496.65150-0.870305.972804.96930HepG2SF3B1
KPNA3ENSG00000102753.51699.391001164.565000.545109.928008.90960HepG2SF3B4
KPNA3ENSG00000102753.5873.950601747.94710-1.0000036.8837034.94390HepG2SLBP
KPNA3ENSG00000102753.5687.114201219.73990-0.828003.715901.86520HepG2SLTM
KPNA3ENSG00000102753.51967.512801603.848100.294702.208101.62300HepG2SMN1
KPNA3ENSG00000102753.5925.882501274.75760-0.461302.772201.81420HepG2SMNDC1
KPNA3ENSG00000102753.51280.328302509.59640-0.9709012.9206012.05030HepG2SRFBP1
KPNA3ENSG00000102753.57741.775201215.530002.6710099999.9999999999.99999HepG2SRSF1
KPNA3ENSG00000102753.51343.782002504.95860-0.8985030.4374028.62460HepG2SRSF7
KPNA3ENSG00000102753.51580.04040988.877900.6760015.8506014.72370HepG2SRSF9
KPNA3ENSG00000102753.53164.525202179.057700.538208.408907.60940HepG2SSB
KPNA3ENSG00000102753.52853.916502047.114500.4793011.8988010.76150HepG2SUCLG1
KPNA3ENSG00000102753.5392.75050990.82450-1.335009.992308.30700HepG2SUPT6H
KPNA3ENSG00000102753.53604.759101762.795101.0319017.1709015.73650HepG2SUPV3L1
KPNA3ENSG00000102753.51404.108501092.499800.361904.080903.42050HepG2TAF15
KPNA3ENSG00000102753.51736.580302457.75460-0.501102.441301.75440HepG2TARDBP
KPNA3ENSG00000102753.51821.858301007.663500.854304.694803.33600HepG2TBRG4
KPNA3ENSG00000102753.5982.724201513.92310-0.623408.491507.58910HepG2TRIM56
KPNA3ENSG00000102753.5854.49650612.670000.479903.037701.40690HepG2TROVE2
KPNA3ENSG00000102753.52809.430001254.926501.1626019.4017017.68710HepG2U2AF1
KPNA3ENSG00000102753.5408.742101041.36500-1.3492022.4705020.39890HepG2UCHL5
KPNA3ENSG00000102753.51350.749701166.558200.211402.068901.44980HepG2UPF1
KPNA3ENSG00000102753.51523.889601199.085300.345704.325403.04960HepG2UTP18
KPNA3ENSG00000102753.52155.148601126.271500.9361032.6219030.91540HepG2UTP3
KPNA3ENSG00000102753.52994.611601374.809101.1230013.9040011.73270HepG2XRCC6
KPNA3ENSG00000102753.51198.568801735.27720-0.533904.805403.85920HepG2XRN2
KPNA3ENSG00000102753.51527.893801324.685200.205802.215001.60430HepG2ZC3H8
KPNA3ENSG00000102753.51682.259301282.995700.390807.330106.55010HepG2ZNF622
KPNA3ENSG00000102753.51204.41300915.997600.394804.143103.47320K562AGGF1
KPNA3ENSG00000102753.51328.71370953.137000.479204.858203.98350K562AKAP8L
KPNA3ENSG00000102753.51136.977701413.20590-0.313802.459401.89990K562AQR
KPNA3ENSG00000102753.5584.13990853.28500-0.546706.584904.42840K562BCCIP
KPNA3ENSG00000102753.5277.05170376.46840-0.442402.262501.32670K562CCAR1
KPNA3ENSG00000102753.51447.043801094.667400.402504.489802.94880K562CCDC124
KPNA3ENSG00000102753.51546.542201329.982100.217502.118801.53640K562DDX47
KPNA3ENSG00000102753.51382.773801025.643800.430905.741504.42420K562DKC1
KPNA3ENSG00000102753.5640.09020872.45220-0.446805.044503.38600K562EIF2S1
KPNA3ENSG00000102753.5835.971501066.99140-0.352002.576901.87850K562EIF2S2
KPNA3ENSG00000102753.5556.76310724.34710-0.379602.973301.62270K562EWSR1
KPNA3ENSG00000102753.5507.236401121.48330-1.1447019.5919017.14470K562FIP1L1
KPNA3ENSG00000102753.51143.65950862.968100.406204.780204.01440K562FXR1
KPNA3ENSG00000102753.51222.15530825.357200.566204.028503.13560K562G3BP2
KPNA3ENSG00000102753.5386.26700744.15220-0.9460012.0465010.87460K562HNRNPC
KPNA3ENSG00000102753.51558.352601011.516600.623403.012302.14950K562KIF1C
KPNA3ENSG00000102753.5481.57120754.57340-0.647905.492203.28430K562LIN28B
KPNA3ENSG00000102753.51546.599401133.154100.448704.801803.54120K562MBNL1
KPNA3ENSG00000102753.51229.52400794.259000.630302.923002.01300K562NAA15
KPNA3ENSG00000102753.5845.887101273.11860-0.589806.310804.98600K562PPIG
KPNA3ENSG00000102753.51089.08730712.265800.612506.060304.95010K562PRPF8
KPNA3ENSG00000102753.5370.11220667.18860-0.850108.601106.81750K562PSIP1
KPNA3ENSG00000102753.5675.65790968.55930-0.519505.607804.69090K562PTBP1
KPNA3ENSG00000102753.51212.94670787.536500.623003.482201.86000K562RAVER1
KPNA3ENSG00000102753.51677.05570921.004100.8646019.5125017.89950K562RBM15
KPNA3ENSG00000102753.5937.25230725.577500.369202.321601.57640K562RPS19
KPNA3ENSG00000102753.5269.66650414.69400-0.620904.324002.71290K562SLBP
KPNA3ENSG00000102753.5310.41950576.96480-0.894308.907906.75520K562SRFBP1
KPNA3ENSG00000102753.5496.40070654.83440-0.399602.615201.59810K562SRSF4
KPNA3ENSG00000102753.5683.59080961.00880-0.491404.071503.20700K562TARDBP
KPNA3ENSG00000102753.5696.92850926.98080-0.411503.596002.64400K562TIA1
KPNA3ENSG00000102753.5722.59260909.45790-0.331802.270201.30250K562TRA2A
KPNA3ENSG00000102753.51091.45470800.274700.447603.114301.94360K562U2AF1
KPNA3ENSG00000102753.51131.28760826.432600.452904.958903.88490K562U2AF2
KPNA3ENSG00000102753.5445.17390729.94000-0.713406.385304.76210K562UCHL5
KPNA3ENSG00000102753.5725.899801080.25880-0.573509.528708.29360K562UPF1
KPNA3ENSG00000102753.51148.61700961.188000.256902.586201.76560K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KPNA3 is not available on ENCORE database.





2 RBPs can affect the splicing of KPNA3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSKPNA3ENSG00000102753.5chr13-5028023350280338502802335028030550280403502805080.075000.000060.00848longerHepG2RBM22
A3SSKPNA3ENSG00000102753.5chr13-5030709250307224503070925030718250321084503211290.052000.009340.04985longerK562AQR
A3SSKPNA3ENSG00000102753.5chr13-5028040350280534502804035028050850283707502838360.117000.000010.00015longerK562AQR
A3SSKPNA3ENSG00000102753.5chr13-5028370750283889502837075028383650285026502851580.051000.000720.00518longerK562AQR
MXEKPNA3ENSG00000102753.5chr13-50280403502806525028370750283859502802335028030550285026502851580.099000.009260.059471includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for KPNA3 is not avaliable on ENCORE database.