TOP2A

General Information

Gene Name       : TOP2A
Gene ID             : ENSG00000131747.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TOP2A)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TOP2AENSG00000131747.14162.78135.58149.18ENCSR000AEF
HepG2TOP2AENSG00000131747.14148.81313.69231.25ENCSR985KAT
K562TOP2AENSG00000131747.14147.42157.05152.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TOP2A is not avaliable on ENCORE database.



Proteins bound to RNA

  • TOP2A RNA is bound by 47 proteins.  







eCLIP assay for TOP2A is not avaliable on ENCORE database.





47 proteins are bound to TOP2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173854556338545600-3'-UTR,intron-Distal5.3034011.71197HepG2SUB1
chr173854479238544831-3'-UTR,intron-Distal5.4158540.75714K562PUM2
chr173854560138545669-3'-UTR,intron-Distal3.192349.13742K562NOLC1
chr173854493538544988-3'-UTR,intron-Distal4.1843511.57820HepG2ZC3H11A
chr173854479738544834-3'-UTR,intron-Distal3.635486.77513HepG2FUBP3
chr173854484838544917-3'-UTR,intron-Distal7.1704622.87844HepG2SUB1
chr173854479138544836-3'-UTR,intron-Distal3.399334.20926HepG2ZC3H11A
chr173854560038545668-3'-UTR,intron-Distal4.9429026.49243HepG2SUB1
chr173854486338544955-3'-UTR,intron-Distal3.3138216.64045K562ZC3H11A
chr173854489738544984-3'-UTR,intron-Distal3.1693112.15346K562UPF1
chr173854479138544830-3'-UTR,intron-Distal4.136475.74545K562CPEB4
chr173854540338545450-3'-UTR,intron-Distal4.3742815.30140K562IGF2BP1
chr173854488838544942-3'-UTR,intron-Distal3.231634.61266K562IGF2BP1
chr173854567638545711-3'-UTR,intron-Distal3.287548.38953HepG2SUB1
chr173854543438545505-3'-UTR,intron-Distal4.4543614.68051K562TIA1
chr173854483738544919-3'-UTR,intron-Distal3.6752439.33253K562PUM2
chr173854543538545443-3'-UTR,intron-Distal3.526767.42315K562YBX3
chr173854495538544987-3'-UTR,intron-Distal4.736036.57824K562ZC3H11A
chr173854505838545118-3'-UTR,intron-Distal3.0653914.89757HepG2DDX55
chr173854478538544832-3'-UTR,intron-Distal4.314765.54046K562ZC3H11A
chr173854478738544824-3'-UTR,intron-Distal3.662304.48983K562TIA1
chr173854485638544901-3'-UTR,intron-Distal3.428575.27768K562DDX6
chr173854545038545510-3'-UTR,intron-Distal3.8432110.46364K562IGF2BP1
chr173854545538545519-3'-UTR,intron-Distal4.2022313.72294HepG2SUB1
chr173854507638545119-3'-UTR,intron-Distal3.0654919.34443HepG2SUB1
chr173854527938545324-3'-UTR,intron-Distal3.705776.25289K562IGF2BP1
chr173854483638544918-3'-UTR,intron-Distal4.6820424.77885HepG2FUBP3
chr173854507238545117-3'-UTR,intron-Distal3.179689.69523HepG2DDX6
chr173854516838545193-3'-UTR,intron-Distal3.4116738.94827K562YBX3
chr173854550538545566-3'-UTR,intron-Distal3.6804720.25443K562TIA1
chr173857407438574148-5'-UTR,intron-Distal4.0171421.90883K562FMR1
chr173857407338574146-5'-UTR,intron-Distal3.028063.30791HepG2SRSF9
chr173857309538573141-5'-UTR,CDS,intron-Distal3.345929.61425HepG2GRWD1
chr173857401838574110-5'-UTR,CDS,intron-Distal,intron-Proximal3.199227.25352K562GEMIN5
chr173857407238574145-5'-UTR,intron-Distal3.1694713.60377K562FXR2
chr173857398438574045-5'-UTR,CDS,intron-Distal,intron-Proximal3.753305.40420HepG2AQR
chr173857311638573148-5'-UTR,CDS,intron-Distal,intron-Proximal3.5908421.85689K562PUM2
chr173857402238574080-5'-UTR,CDS,intron-Distal,intron-Proximal3.2061515.47085K562DDX3X
chr173857228738572319-CDS,intron-Distal3.3728216.65119HepG2BCLAF1
chr173855509838555137-CDS,intron-Distal3.0708020.42227K562UCHL5
chr173855529238555353-CDS,intron-Distal3.329109.75237HepG2GRWD1
chr173856073838560743-CDS,intron-Distal3.2458714.85198K562ZNF622
chr173856912638569141-CDS,intron-Distal3.006046.71555HepG2GRWD1
chr173856283638562844-CDS,intron-Distal,intron-Proximal3.7959917.05386K562UCHL5
chr173855729538557328-CDS,intron-Distal3.050954.95591K562SND1
chr173855270938552716-CDS,intron-Distal3.6565314.46786K562ZNF622
chr173854883638548879-CDS,intron-Distal,intron-Proximal3.1933022.35167K562UCHL5
chr173856104338561064-CDS,intron-Distal3.592349.37593HepG2GRWD1
chr173854846938548509-CDS,intron-Distal,intron-Proximal3.128004.13127HepG2FXR2
chr173856273538562744-CDS,intron-Distal,intron-Proximal3.653515.48341K562GRWD1
chr173856272538562786-CDS,intron-Distal,intron-Proximal3.429738.87315K562EFTUD2
chr173856070238560742-CDS,intron-Distal3.881339.94245HepG2GRWD1
chr173855529138555295-CDS,intron-Distal,intron-Proximal3.6925919.62901K562UCHL5
chr173857226638572366-CDS,intron-Distal,intron-Proximal3.1877816.33714K562SF3B4
chr173854883938548878-CDS,intron-Distal3.078475.48517HepG2GRWD1
chr173855711438557131-CDS,intron-Distal3.374856.78893HepG2GRWD1
chr173854781838547874-CDS,intron-Distal3.328245.24964HepG2FXR2
chr173855172738551782-CDS,intron-Distal3.9228728.34682K562UCHL5
chr173856432938564377-CDS,intron-Distal,intron-Proximal3.5668613.25731K562FMR1
chr173856911138569157-CDS,intron-Distal3.1558625.85830K562ZNF622
chr173856430038564329-CDS,intron-Distal3.448585.85678K562FMR1
chr173855730838557331-CDS,intron-Distal4.010013.01429K562IGF2BP1
chr173855710238557114-CDS,intron-Distal3.387086.30955HepG2GRWD1
chr173856789638567929-CDS,intron-Distal,intron-Proximal3.3729118.90080K562ZNF622
chr173856484438564883-CDS,intron-Distal,intron-Proximal3.431129.93920K562LIN28B
chr173856071138560737-CDS,intron-Distal3.654744.76888HepG2UCHL5
chr173856803538568055-CDS,intron-Distal3.135973.67498K562SAFB2
chr173856425238564310-CDS,intron-Distal4.331577.93716K562FXR2
chr173857308538573122-CDS,intron-Distal4.8704122.74466HepG2BCLAF1
chr173855258138552626-CDS,intron-Distal,intron-Proximal4.5356128.10734K562UCHL5
chr173855705038557105-CDS,intron-Distal,intron-Proximal3.3100611.66442K562AQR
chr173856271538562745-CDS,intron-Distal,intron-Proximal3.200603.18818K562FXR1
chr173856071638560743-CDS,intron-Distal3.249337.02313K562MTPAP
chr173856106438561098-CDS,intron-Distal3.5678310.00318K562GRWD1
chr173855174238551786-CDS,intron-Distal4.9401621.36451HepG2BCLAF1
chr173856069438560742-CDS,intron-Distal5.6979641.94351HepG2BCLAF1
chr173856040338560434-CDS,intron-Distal,intron-Proximal3.301733.38308HepG2UCHL5
chr173856285338562916-CDS,intron-Distal3.108818.30873HepG2GRWD1
chr173856271638562737-CDS,intron-Distal,intron-Proximal5.8228235.96532HepG2BCLAF1
chr173855687038556887-CDS,intron-Distal3.499018.42595K562NIPBL
chr173856912338569210-CDS,intron-Distal3.4328912.13524K562GRWD1
chr173855660238556626-CDS,intron-Distal3.5445614.74273HepG2BCLAF1
chr173857305938573085-CDS,intron-Distal4.5641917.78023HepG2BCLAF1
chr173856310738563149-CDS,intron-Distal3.792646.21133K562FXR2
chr173857301838573048-CDS,intron-Distal4.4892616.97771HepG2GRWD1
chr173855481238554823-CDS,intron-Distal4.1098915.88746K562ZNF622
chr173855269538552716-CDS,intron-Distal3.6583420.80258K562UCHL5
chr173856068938560711-CDS,intron-Distal4.058553.75945HepG2UCHL5
chr173855268638552715-CDS,intron-Distal3.6305915.54241HepG2BCLAF1
chr173856272538562742-CDS,intron-Distal,intron-Proximal3.659896.81934HepG2GRWD1
chr173855510238555145-CDS,intron-Distal3.6870524.38198K562ZNF622
chr173857397038574039-CDS,intron-Distal,intron-Proximal3.556306.87008HepG2PRPF8
chr173855529138555343-CDS,intron-Distal,intron-Proximal3.733033.60082HepG2TRA2A
chr173856271338562745-CDS,intron-Distal,intron-Proximal4.881416.26041K562FXR2
chr173856976338569791-CDS,intron-Distal3.4108316.94500HepG2BCLAF1
chr173855504138555126-CDS,intron-Distal5.0182049.18978HepG2BCLAF1
chr173856801838568025-CDS,intron-Distal3.5199012.50248K562UCHL5
chr173856974038569763-CDS,intron-Distal4.3052125.87880HepG2BCLAF1
chr173856283538562844-CDS,intron-Distal,intron-Proximal5.5417528.05296HepG2BCLAF1
chr173855650538556537-CDS,intron-Distal4.7243014.48643HepG2GRWD1
chr173856485238564871-CDS,intron-Distal3.9328215.80228HepG2BCLAF1
chr173856381638563835-CDS,intron-Distal4.1233711.60690HepG2GRWD1
chr173856040438560424-CDS,intron-Distal3.0342210.30710K562ZNF622
chr173855505538555124-CDS,intron-Distal3.8783813.56684HepG2GRWD1
chr173854889338548933-CDS,intron-Distal3.6950720.62260K562UCHL5
chr173856067538560740-CDS,intron-Distal3.616356.07466K562FXR1
chr173856071038560735-CDS,intron-Distal3.7013921.92380K562UCHL5
chr173856804338568056-CDS,intron-Distal3.3317814.42925K562UCHL5
chr173856973238569739-CDS,intron-Distal4.1947517.46419HepG2BCLAF1
chr173857299538573015-CDS,intron-Distal3.3155815.67240K562ZNF622
chr173855269238552709-CDS,intron-Distal3.3759614.52978K562ZNF622
chr173856308438563138-CDS,intron-Distal3.9842818.14645HepG2GRWD1
chr173856273738562742-CDS,intron-Distal,intron-Proximal5.3598233.37890HepG2BCLAF1
chr173855257538552598-CDS,intron-Distal,intron-Proximal4.718924.13543HepG2FXR2
chr173856920038569208-CDS,intron-Distal3.230714.76623K562MTPAP
chr173855529738555337-CDS,intron-Distal3.7253829.35877K562ZNF622
chr173855710138557133-CDS,intron-Distal,intron-Proximal4.70864400.00000K562PUM2
chr173857261638572689-CDS,intron-Distal,intron-Proximal3.0963010.64614K562EFTUD2
chr173856104438561064-CDS,intron-Distal3.6700712.58313K562GRWD1
chr173855661638556650-CDS,intron-Distal3.752539.86022K562YBX3
chr173856311438563140-CDS,intron-Distal3.3361313.18863HepG2BCLAF1
chr173855710438557144-CDS,intron-Distal4.092073.36587K562FXR1
chr173854847338548514-CDS,intron-Distal3.8053523.06654HepG2BCLAF1
chr173856910538569181-CDS,intron-Distal3.734617.32550HepG2ZNF800
chr173856911438569165-CDS,intron-Distal5.0117141.00233HepG2BCLAF1
chr173855650638556557-CDS,intron-Distal3.2831025.24840K562UCHL5
chr173855685638556899-CDS,intron-Distal3.2293221.46021K562ZNF622
chr173856308538563105-CDS,intron-Distal4.127604.66169HepG2UCHL5
chr173855660138556616-CDS,intron-Distal3.193905.92885K562YBX3
chr173856071838560738-CDS,intron-Distal3.3974216.81987K562ZNF622
chr173856283638562844-CDS,intron-Distal,intron-Proximal3.758845.69924K562GRWD1
chr173855678538556823-CDS,intron-Distal3.376607.31003HepG2GRWD1
chr173855482738554857-CDS,intron-Distal3.165427.37957K562GRWD1
chr173856316438563195-CDS,intron-Distal,intron-Proximal3.237244.51385K562FMR1
chr173855917038559232-CDS,intron-Distal3.586988.52705K562DGCR8
chr173856274238562745-CDS,intron-Distal,intron-Proximal5.5963530.11081HepG2BCLAF1
chr173857300938573040-CDS,intron-Distal3.2921718.62173K562UCHL5
chr173856313838563154-CDS,intron-Distal4.3760111.57577HepG2GRWD1
chr173856736038567371-CDS,intron-Distal,intron-Proximal4.160189.46646K562LIN28B
chr173856288038562910-CDS,intron-Distal3.6291619.06656K562ZNF622
chr173855690538556914-CDS,intron-Distal3.090095.76891HepG2GRWD1
chr173856478938564844-CDS,intron-Distal3.715118.73343K562LIN28B
chr173855651538556573-CDS,intron-Distal3.0709712.26765K562NIPBL
chr173855711538557133-CDS,intron-Distal5.8736224.79748HepG2BCLAF1
chr173855481038554825-CDS,intron-Distal3.015933.50849HepG2PPIG
chr173855529538555335-CDS,intron-Distal3.2987431.59129K562UCHL5
chr173854636538546373-CDS,intron-Distal3.2519913.94348K562YBX3
chr173855923738559265-CDS,intron-Distal3.549377.65887HepG2GRWD1
chr173855678638556818-CDS,intron-Distal3.4290516.62777HepG2BCLAF1
chr173855684538556852-CDS,intron-Distal4.0111712.01397HepG2BCLAF1
chr173856073538560743-CDS,intron-Distal3.2976920.60204K562UCHL5
chr173855481038554819-CDS,intron-Distal5.5093317.23395HepG2BCLAF1
chr173856380138563803-CDS,intron-Distal5.245298.78094HepG2GRWD1
chr173855480938554812-CDS,intron-Distal,intron-Proximal3.6267811.15182K562ZNF622
chr173855529138555348-CDS,intron-Distal,intron-Proximal3.011664.59358K562TRA2A
chr173857301538573052-CDS,intron-Distal3.3381321.99753K562ZNF622
chr173856902538569087-CDS,intron-Distal3.855479.14197K562LIN28B
chr173856310538563150-CDS,intron-Distal4.614656.62169HepG2UCHL5
chr173857299938573018-CDS,intron-Distal4.1883812.61417HepG2GRWD1
chr173856073838560743-CDS,intron-Distal3.272973.40171HepG2UCHL5
chr173855917338559221-CDS,intron-Distal3.022124.64090K562FMR1
chr173856769538567701-CDS,intron-Distal3.3047410.62736K562ZNF622
chr173855263238552679-CDS,intron-Distal,intron-Proximal4.0578436.06882K562UCHL5
chr173855710138557115-CDS,intron-Distal,intron-Proximal5.4405128.05296HepG2BCLAF1
chr173856305938563120-CDS,intron-Distal,intron-Proximal5.420266.69228HepG2PRPF8
chr173855617338556234-CDS,intron-Distal4.9197445.88339HepG2BCLAF1
chr173855267938552695-CDS,intron-Distal3.7566325.95343K562UCHL5
chr173856287038562911-CDS,intron-Distal3.279003.74115HepG2UCHL5
chr173856916138569203-CDS,intron-Distal3.9968525.34050K562UCHL5
chr173854783138547871-CDS,intron-Distal3.9311921.73210HepG2BCLAF1
chr173854637338546391-CDS,intron-Distal3.4510418.30932K562YBX3
chr173856474338564777-CDS,intron-Distal,intron-Proximal3.149986.53596HepG2GRWD1
chr173856474338564755-CDS,intron-Distal,intron-Proximal3.575959.24219K562FMR1
chr173854885338548875-CDS,intron-Distal4.3540916.36868HepG2BCLAF1
chr173856271638562744-CDS,intron-Distal,intron-Proximal3.0151311.18276K562BUD13
chr173856905038569157-CDS,intron-Distal4.100234.53184K562IGF2BP1
chr173856292038562931-CDS,intron-Distal3.5817513.10126HepG2BCLAF1
chr173855649738556537-CDS,intron-Distal3.146953.88005K562FXR2
chr173856912038569145-CDS,intron-Distal3.470685.58962K562RBM15
chr173855651438556578-CDS,intron-Distal3.2494927.23332K562ZNF622
chr173854884138548852-CDS,intron-Distal4.1788414.92651K562ZNF622
chr173856287838562911-CDS,intron-Distal3.9824719.57725HepG2BCLAF1
chr173855659138556642-CDS,intron-Distal3.210349.81781HepG2GRWD1
chr173855623538556292-CDS,intron-Distal4.548014.67478K562FXR1
chr173856272738562744-CDS,intron-Distal,intron-Proximal5.537159.03001HepG2HLTF
chr173857301338573099-CDS,intron-Distal3.308009.12772K562ZNF800
chr173856736038567363-CDS,intron-Distal,intron-Proximal3.2062510.65712K562YBX3
chr173856798038568052-CDS,intron-Distal5.4881411.88998K562LIN28B
chr173856761238567659-CDS,intron-Distal3.045013.73743HepG2TRA2A
chr173855730538557316-CDS,intron-Distal3.4073910.72725K562BUD13
chr173856736338567371-CDS,intron-Distal3.4862611.21220K562YBX3
chr173856272138562739-CDS,intron-Distal,intron-Proximal4.1782918.41249K562UCHL5
chr173856104238561063-CDS,intron-Distal,intron-Proximal4.5090527.79811HepG2BCLAF1
chr173855533838555361-CDS,intron-Distal3.0663014.38066K562NIPBL
chr173854833238548353-CDS,intron-Distal4.0976616.09505HepG2BCLAF1
chr173854847038548514-CDS,intron-Distal3.4141910.95944HepG2GRWD1
chr173856317538563193-CDS,intron-Distal5.589519.91422HepG2GRWD1
chr173856271838562745-CDS,intron-Distal,intron-Proximal3.587356.54545K562FMR1
chr173855503038555082-CDS,intron-Distal3.080724.78436HepG2FXR2
chr173855686038556905-CDS,intron-Distal3.019786.25288HepG2GRWD1
chr173854884038548853-CDS,intron-Distal4.4225913.93122HepG2BCLAF1
chr173855517438555189-CDS,intron-Distal3.939344.31749K562TRA2A
chr173856915738569213-CDS,intron-Distal3.0296525.26235K562ZNF622
chr173856292438562939-CDS,intron-Distal3.755395.41801K562NIPBL
chr173854883638548961-CDS,intron-Distal,intron-Proximal3.3703510.79986HepG2FXR2
chr173856742338567456-CDS,intron-Distal3.969373.58697HepG2UCHL5
chr173855685638556898-CDS,intron-Distal5.0142033.99072HepG2BCLAF1
chr173856474338564757-CDS,intron-Distal,intron-Proximal3.128926.16990K562FXR2
chr173855259638552621-CDS,intron-Distal,intron-Proximal5.6599121.69280HepG2BCLAF1
chr173855653738556560-CDS,intron-Distal4.3625215.24676HepG2GRWD1
chr173857300238573052-CDS,intron-Distal3.365774.83522HepG2ZNF800
chr173855656038556583-CDS,intron-Distal3.824099.80714HepG2GRWD1
chr173855650738556560-CDS,intron-Distal4.4199336.41616HepG2BCLAF1
chr173855620738556234-CDS,intron-Distal4.354613.18004K562FXR1
chr173856423438564271-CDS,intron-Distal4.199173.36793K562FXR1
chr173855715338557184-CDS,intron-Distal3.3426012.69332K562PUM2
chr173857273138572766-CDS,intron-Distal,intron-Proximal3.2018615.63547K562BUD13
chr173855613638556173-CDS,intron-Distal4.7427324.33549HepG2BCLAF1
chr173857304838573095-CDS,intron-Distal3.7757210.78389HepG2GRWD1
chr173857266138572682-CDS,intron-Distal,intron-Proximal3.029186.53539K562PRPF8
chr173857267138572689-CDS,intron-Distal,intron-Proximal5.724604.02817HepG2PRPF8
chr173856761838567666-CDS,intron-Distal4.547036.26355HepG2UCHL5
chr173856283538562842-CDS,intron-Distal,intron-Proximal5.321194.41602K562FXR2
chr173855689938556914-CDS,intron-Distal3.1799816.78587K562ZNF622
chr173856769638567702-CDS,intron-Distal3.2206116.06297K562YBX3
chr173856274238562745-CDS,intron-Distal,intron-Proximal3.693194.91547HepG2GRWD1
chr173855689838556914-CDS,intron-Distal5.5375929.42431HepG2BCLAF1
chr173856916838569210-CDS,intron-Distal3.297114.64637K562FXR2
chr173856769138567754-CDS,intron-Distal,intron-Proximal3.6773014.32849K562SF3B4
chr173856272738562734-CDS,intron-Distal4.131513.01090HepG2CDC40
chr173856761438567663-CDS,intron-Distal4.2336435.32177HepG2BCLAF1
chr173855529338555353-CDS,intron-Distal3.9339732.21000HepG2BCLAF1
chr173856802338568058-CDS,intron-Distal3.604178.79498K562GRWD1
chr173854896838549021-CDS,intron-Distal,intron-Proximal3.031799.54630K562GPKOW
chr173855713338557153-CDS,intron-Distal4.9062687.53955K562PUM2
chr173855529338555345-CDS,intron-Distal3.395343.74115HepG2UCHL5
chr173855170038551733-CDS,intron-Distal,intron-Proximal3.774684.48452HepG2FXR2
chr173855690838556915-CDS,intron-Distal3.2117410.92013K562PUM2
chr173856952538569543-CDS,intron-Distal4.9245921.87973HepG2BCLAF1
chr173856477138564789-CDS,intron-Distal3.928003.04123K562LIN28B
chr173856916538569204-CDS,intron-Distal5.7210530.79783HepG2BCLAF1
chr173855917638559220-CDS,intron-Distal3.221708.34198K562FXR2
chr173856912138569161-CDS,intron-Distal3.7140127.71242K562UCHL5
chr173856040338560420-CDS,intron-Distal,intron-Proximal3.949447.44807HepG2GRWD1
chr173856798338568066-CDS,intron-Distal5.9623057.14697HepG2BCLAF1
chr173855684338556897-CDS,intron-Distal3.3317831.51754K562UCHL5
chr173856286838562914-CDS,intron-Distal3.091924.13127HepG2FXR2
chr173856106738561092-CDS,intron-Distal3.599383.71990K562FXR1
chr173855505138555102-CDS,intron-Distal3.2354824.93386K562ZNF622
chr173856486738564927-CDS,intron-Distal,intron-Proximal3.276729.62351K562SF3B4
chr173856283538562843-CDS,intron-Distal,intron-Proximal5.105356.21976HepG2HLTF
chr173856283538562843-CDS,intron-Distal,intron-Proximal3.769905.74981HepG2GRWD1
chr173855718038557238-CDS,intron-Distal3.647094.44247K562FXR1
chr173856474338564756-CDS,intron-Distal,intron-Proximal3.872683.02618HepG2UCHL5
chr173856106338561086-CDS,intron-Distal3.8184420.64975HepG2BCLAF1
chr173854783738547878-CDS,intron-Distal4.204653.74028K562FXR1
chr173857300038573042-CDS,intron-Distal3.8646426.02501HepG2BCLAF1
chr173854884238548852-CDS,intron-Distal3.445203.88509K562SND1
chr173856104538561086-CDS,intron-Distal4.088606.42089K562FXR2
chr173855480938554823-CDS,intron-Distal,intron-Proximal3.4771615.92841K562UCHL5
chr173855482938554850-CDS,intron-Distal3.5001815.94800K562UCHL5
chr173855481638554855-CDS,intron-Distal3.789223.81194K562TRA2A
chr173856474438564764-CDS,intron-Distal4.8728224.56431HepG2BCLAF1
chr173856293538562938-CDS,intron-Distal3.9983010.92176HepG2BCLAF1
chr173856273938562745-CDS,intron-Distal,intron-Proximal4.0928617.75427K562UCHL5
chr173856380338563816-CDS,intron-Distal4.8235913.11867HepG2GRWD1
chr173856104338561067-CDS,intron-Distal3.511003.54207K562FXR1
chr173855517738555189-CDS,intron-Distal3.0291015.04994K562UCHL5
chr173854639138546414-CDS,intron-Distal3.4294717.68229K562YBX3
chr173856432138564376-CDS,intron-Distal3.104447.96601K562FXR2
chr173854770138547751-intron-Distal,intron-Proximal4.152457.44508K562PRPF8
chr173856727438567323-intron-Distal,intron-Proximal4.042986.75234K562PRPF8
chr173856781338567833-intron-Distal,intron-Proximal3.377826.57673K562KHSRP
chr173854747738547519-intron-Distal4.864379.98748K562TROVE2
chr173856940238569429-intron-Distal,intron-Proximal5.596847.28294K562AQR
chr173855161538551638-intron-Distal,intron-Proximal4.234654.21433K562PRPF8
chr173857290638572943-intron-Distal,intron-Proximal4.514316.48405K562AQR
chr173856457038564608-intron-Distal4.197404.37030K562KHSRP
chr173856723238567312-intron-Distal,intron-Proximal3.865873.43867K562CSTF2T
chr173856449938564570-intron-Distal4.4034611.26674K562KHSRP
chr173857216038572215-intron-Distal,intron-Proximal3.342117.70554K562KHSRP
chr173854839738548462-intron-Distal,intron-Proximal3.034985.66866K562KHSRP
chr173857263638572671-intron-Distal,intron-Proximal5.735874.02817HepG2PRPF8
chr173856461338564672-intron-Distal,intron-Proximal3.752917.05055K562PRPF8
chr173855865538558726-intron-Distal4.439835.07733HepG2PTBP1
chr173856597138566037-intron-Distal3.793993.81381K562HNRNPC
chr173856466838564699-intron-Distal,intron-Proximal3.470547.71234K562KHSRP
chr173856035338560376-intron-Distal,intron-Proximal4.292565.97994K562AQR
chr173856776138567813-intron-Distal,intron-Proximal3.654408.98001K562KHSRP
chr173854645838546518-intron-Distal,intron-Proximal3.878233.66349K562LIN28B
chr173854719838547288-intron-Distal3.125975.67819K562KHSRP
chr173855609238556115-intron-Distal,intron-Proximal3.370154.41130K562AQR
chr173857067938570794-intron-Distal4.023313.31709K562ILF3
chr173854825438548308-intron-Distal,intron-Proximal4.7046212.86643K562AQR
chr173857298038572992-intron-Distal,intron-Proximal3.036164.14951K562AQR
chr173857263838572661-intron-Distal,intron-Proximal5.373837.58908K562PRPF8
chr173855634438556390-intron-Distal,intron-Proximal3.878683.71397K562KHSRP
chr173854826838548298-intron-Distal,intron-Proximal3.334664.64824K562PRPF8
chr173857221538572240-intron-Distal,intron-Proximal3.657538.34206K562KHSRP
chr173857398038574022-intron-Distal,intron-Proximal5.5529322.30360K562AQR
chr173856893538568998-intron-Distal,intron-Proximal3.358584.56724K562KHSRP
chr173857294838572980-intron-Distal,intron-Proximal3.215485.12057K562AQR
chr173856706138567158-intron-Distal3.268635.49850HepG2HNRNPL
chr173854772938547756-intron-Distal,intron-Proximal3.317884.38107K562AQR
chr173856099238561035-intron-Distal,intron-Proximal4.9455611.65116K562AQR
chr173856460838564668-intron-Distal,intron-Proximal3.536868.26817K562KHSRP
chr173857279138572911-intron-Distal,intron-Proximal3.6578210.63600K562KHSRP
chr173856099538561023-intron-Distal,intron-Proximal4.736505.70555K562PRPF8
chr173854771438547729-intron-Distal,intron-Proximal5.395796.75320K562AQR
chr173857290338572914-intron-Distal,intron-Proximal3.234653.47285K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TOP2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TOP2A is not available on ENCORE database.

  • 195 RBPs can affect the levels of TOP2A.  








The Knockdown/knockout RNA-Seq assay for TOP2A is not available on ENCORE database.





195 RBPs can affect the gene expression of TOP2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TOP2AENSG00000131747.107844.7034012602.04640-0.683905.803003.38790HepG2AARS
TOP2AENSG00000131747.106122.946809051.64210-0.564002.298501.31930HepG2AATF
TOP2AENSG00000131747.109607.7452014909.43160-0.634004.955203.73110HepG2ABCF1
TOP2AENSG00000131747.105428.3711013333.14520-1.2964014.6618013.49590HepG2ACO1
TOP2AENSG00000131747.101860.383009493.71510-2.3514051.3030049.45680HepG2AKAP1
TOP2AENSG00000131747.101729.500604511.13520-1.383109.778707.95980HepG2AKAP8
TOP2AENSG00000131747.105906.3737013398.18130-1.1817012.6556011.17620HepG2AKAP8L
TOP2AENSG00000131747.102619.931005611.77960-1.098904.268902.16130HepG2APOBEC3C
TOP2AENSG00000131747.10563.523107855.47170-3.8012095.1770091.65310HepG2ASCC1
TOP2AENSG00000131747.109007.8427013461.58170-0.579604.089002.40750HepG2ATP5C1
TOP2AENSG00000131747.104014.9837018179.26960-2.17880180.04090176.42190HepG2AUH
TOP2AENSG00000131747.104797.6828012857.43410-1.4222032.1145028.73950HepG2BCCIP
TOP2AENSG00000131747.102903.3222011172.71840-1.9442063.3144059.98660HepG2BCLAF1
TOP2AENSG00000131747.10216.5964011320.96170-5.70780151.28120148.49990HepG2BOP1
TOP2AENSG00000131747.106946.6063011174.50410-0.685805.883004.13310HepG2BUD13
TOP2AENSG00000131747.105015.7691016007.45130-1.6742099.5158096.29660HepG2CALR
TOP2AENSG00000131747.103256.378807463.16800-1.1965021.2913019.39100HepG2CIRBP
TOP2AENSG00000131747.102633.8032013333.12560-2.3398030.5976028.92650HepG2CKAP4
TOP2AENSG00000131747.101282.412606008.20320-2.2281013.7473012.09740HepG2CNOT7
TOP2AENSG00000131747.103642.7682010392.93050-1.5125027.3940025.52010HepG2CPSF6
TOP2AENSG00000131747.106854.0743012283.32510-0.841705.289003.79880HepG2CPSF7
TOP2AENSG00000131747.108741.3291012715.66330-0.5407014.9240012.70440HepG2YBX3
TOP2AENSG00000131747.106487.9608018359.18010-1.50070118.58670115.78920HepG2CELF1
TOP2AENSG00000131747.108869.7156019742.24060-1.1543059.6043057.11090HepG2DAZAP1
TOP2AENSG00000131747.108184.6924012733.32980-0.6376014.4976012.21030HepG2DDX1
TOP2AENSG00000131747.101634.3931010000.24800-2.6132013.5818012.21770HepG2DDX21
TOP2AENSG00000131747.105359.858109774.78600-0.866903.943202.84050HepG2DDX24
TOP2AENSG00000131747.108221.6076011828.78980-0.524804.175402.63220HepG2DDX27
TOP2AENSG00000131747.106632.148809577.54930-0.530205.509103.62150HepG2DDX28
TOP2AENSG00000131747.10993.149909094.73210-3.1949073.0733070.22940HepG2DDX3X
TOP2AENSG00000131747.103570.5898012641.20880-1.8239052.7721050.15260HepG2DDX55
TOP2AENSG00000131747.102782.8075011802.04480-2.0844033.4216030.51870HepG2DDX59
TOP2AENSG00000131747.108581.2381012354.62930-0.525803.517102.38370HepG2DDX5
TOP2AENSG00000131747.10958.279707811.45330-3.0271077.6108075.10920HepG2DDX6
TOP2AENSG00000131747.107916.1604012042.50600-0.605308.603406.97130HepG2DHX30
TOP2AENSG00000131747.107933.7407012756.95120-0.685206.188205.25250HepG2DKC1
TOP2AENSG00000131747.102850.6365012485.72190-2.13090192.39700188.93740HepG2DNAJC21
TOP2AENSG00000131747.105192.3401012375.62410-1.25300129.43110125.84200HepG2DNAJC2
TOP2AENSG00000131747.107570.1208012466.46600-0.719707.781506.31620HepG2EEF2
TOP2AENSG00000131747.105340.5706010393.63330-0.960609.938907.86360HepG2EFTUD2
TOP2AENSG00000131747.103013.953009199.29010-1.609908.095406.26320HepG2AGO1
TOP2AENSG00000131747.10329.145307510.44090-4.51210114.08030111.00650HepG2EIF2S1
TOP2AENSG00000131747.103468.1134010120.57770-1.5451023.3578021.05150HepG2EIF3D
TOP2AENSG00000131747.103254.172108300.45280-1.3509023.1559021.34620HepG2EIF4A3
TOP2AENSG00000131747.104891.316808080.63890-0.724207.122406.04630HepG2EIF4B
TOP2AENSG00000131747.109176.4660019475.54120-1.0857043.3921040.94220HepG2EIF4G1
TOP2AENSG00000131747.108028.1143018656.57180-1.2166036.7980034.27920HepG2EIF4G2
TOP2AENSG00000131747.106269.7870020871.57750-1.73510137.58980134.48490HepG2ETF1
TOP2AENSG00000131747.106012.7205013031.41990-1.1159011.101109.45890HepG2EWSR1
TOP2AENSG00000131747.105191.653109044.12470-0.8008012.7378010.26960HepG2FAM120A
TOP2AENSG00000131747.103788.800609523.98620-1.329806.532904.90670HepG2FASTKD2
TOP2AENSG00000131747.107666.4783015055.99100-0.973707.484306.28200HepG2FIP1L1
TOP2AENSG00000131747.104840.8675010522.30920-1.1201022.9472020.06980HepG2FKBP4
TOP2AENSG00000131747.104615.8037010411.42900-1.173507.867106.15850HepG2FTO
TOP2AENSG00000131747.105070.753004075.184600.315203.339302.47930HepG2FUBP3
TOP2AENSG00000131747.1014174.752708373.197000.7594012.4209011.06150HepG2FXR1
TOP2AENSG00000131747.103603.832207768.21600-1.1081014.8837013.39940HepG2G3BP1
TOP2AENSG00000131747.104931.441809011.24100-0.8697012.2536010.45670HepG2GEMIN5
TOP2AENSG00000131747.102951.5916011780.29460-1.9968035.6754033.67380HepG2GPKOW
TOP2AENSG00000131747.102474.633105562.86670-1.168605.965604.32670HepG2GRSF1
TOP2AENSG00000131747.104923.1837011576.24970-1.2335016.0964012.96010HepG2GTF2F1
TOP2AENSG00000131747.107222.6201012731.08240-0.817807.795706.25830HepG2HDGF
TOP2AENSG00000131747.107737.4673011774.45530-0.605703.793502.15630HepG2HLTF
TOP2AENSG00000131747.102693.057505085.97400-0.917302.742101.38170HepG2HNRNPA0
TOP2AENSG00000131747.103197.9207012605.34020-1.97880103.06060100.39210HepG2HNRNPA1
TOP2AENSG00000131747.109818.6578018142.90570-0.8858037.4515034.81110HepG2HNRNPA2B1
TOP2AENSG00000131747.102490.246904965.95620-0.995804.349102.58890HepG2HNRNPAB
TOP2AENSG00000131747.104820.5439014021.16210-1.5403063.6602060.86230HepG2HNRNPC
TOP2AENSG00000131747.106050.630609062.85860-0.5829019.8984018.21710HepG2HNRNPF
TOP2AENSG00000131747.108297.6806017984.15990-1.11590102.1392099.12910HepG2HNRNPL
TOP2AENSG00000131747.102560.5795011242.23370-2.1344043.1601041.15110HepG2HNRNPLL
TOP2AENSG00000131747.107114.8822010390.88060-0.546404.556903.36960HepG2HNRNPM
TOP2AENSG00000131747.108642.6705013928.45870-0.6885032.3064030.43720HepG2HNRNPU
TOP2AENSG00000131747.105868.822908924.34080-0.6047013.2874011.82360HepG2IGF2BP1
TOP2AENSG00000131747.10737.770807896.52340-3.4200080.1418077.18560HepG2IGF2BP2
TOP2AENSG00000131747.106313.5334014227.45070-1.17220130.57940127.11820HepG2ILF2
TOP2AENSG00000131747.102425.526005858.29540-1.272206.321104.25740HepG2ILF3
TOP2AENSG00000131747.105084.551207941.98910-0.643402.462201.52660HepG2KHSRP
TOP2AENSG00000131747.102733.756004909.17380-0.844604.107702.57290HepG2KRR1
TOP2AENSG00000131747.107058.1639022538.83570-1.6750013.1143011.33600HepG2LARP4
TOP2AENSG00000131747.108703.4699013128.57220-0.593004.466203.01850HepG2LARP7
TOP2AENSG00000131747.108958.2388013789.64570-0.622304.266502.75590HepG2LIN28B
TOP2AENSG00000131747.105150.840908376.11310-0.701508.523507.38650HepG2MAGOH
TOP2AENSG00000131747.103283.7230010592.51230-1.6896026.4753023.54360HepG2METAP2
TOP2AENSG00000131747.106030.9720012189.92930-1.0152010.271208.81260HepG2MSI2
TOP2AENSG00000131747.106505.0577010234.83100-0.653903.922602.47490HepG2NAA15
TOP2AENSG00000131747.103534.858808621.88340-1.2864023.2101021.49360HepG2NCBP2
TOP2AENSG00000131747.107584.0811011871.64640-0.646503.836302.14840HepG2NIP7
TOP2AENSG00000131747.1011514.9437019576.27870-0.7656012.0856010.54000HepG2NOL12
TOP2AENSG00000131747.104352.625606361.18370-0.547403.871102.17470HepG2NOLC1
TOP2AENSG00000131747.105260.4290011606.30840-1.1417010.858708.63750HepG2NONO
TOP2AENSG00000131747.108205.910509969.04510-0.280802.137001.47680HepG2NSUN2
TOP2AENSG00000131747.102030.606304352.84700-1.1000026.9197022.53200HepG2NUP35
TOP2AENSG00000131747.102843.211205493.20810-0.950103.025602.09450HepG2PABPC1
TOP2AENSG00000131747.102041.947007679.32870-1.9110036.7223034.18270HepG2PABPC4
TOP2AENSG00000131747.108469.2674013786.72500-0.7030030.5307028.31750HepG2PARN
TOP2AENSG00000131747.103916.725907130.22680-0.8643042.2492040.38920HepG2PCBP1
TOP2AENSG00000131747.103145.5323011627.85970-1.8862036.5614033.36420HepG2PCBP2
TOP2AENSG00000131747.108099.2083012602.82450-0.637903.603001.68600HepG2PHF6
TOP2AENSG00000131747.108117.3329012423.06330-0.6139018.2231016.44640HepG2PPIL4
TOP2AENSG00000131747.107212.315509915.35700-0.4592012.7896011.30650HepG2PRPF4
TOP2AENSG00000131747.102716.524209753.41730-1.8441063.4438060.39890HepG2PRPF8
TOP2AENSG00000131747.104977.295607255.16190-0.5436017.7218016.56660HepG2PTBP1
TOP2AENSG00000131747.105478.2533018686.82290-1.7702091.3020088.51390HepG2PUF60
TOP2AENSG00000131747.109065.8461019836.36210-1.12960130.82420128.18000HepG2PUM1
TOP2AENSG00000131747.109336.4598019822.19940-1.0862047.2355044.77840HepG2PUM2
TOP2AENSG00000131747.104751.8750013581.09450-1.5150018.6717017.32630HepG2PUS1
TOP2AENSG00000131747.106330.477307857.75500-0.311804.310003.55600HepG2QKI
TOP2AENSG00000131747.104173.7620011220.78370-1.4268017.3399015.72110HepG2RAVER1
TOP2AENSG00000131747.107582.6744014855.45030-0.9702035.9658033.54960HepG2RBM15
TOP2AENSG00000131747.101722.7353017444.91350-3.34000260.44130257.07370HepG2RBM22
TOP2AENSG00000131747.103967.107307131.32870-0.8461022.1223020.32890HepG2RBM25
TOP2AENSG00000131747.107001.9031015830.33480-1.1769011.686909.62280HepG2RBM27
TOP2AENSG00000131747.106516.5151015798.02810-1.277605.222402.84100HepG2RBM39
TOP2AENSG00000131747.109727.846205804.671600.744803.600401.86000HepG2RBM47
TOP2AENSG00000131747.108533.1979012854.87370-0.591203.946002.67660HepG2RCC2
TOP2AENSG00000131747.1011523.290508074.390400.5130017.0478015.92600HepG2NELFE
TOP2AENSG00000131747.1014922.067707520.030800.9885063.6498061.53890HepG2RECQL
TOP2AENSG00000131747.101042.374409762.73550-3.22740217.72740213.93880HepG2RPLP0
TOP2AENSG00000131747.103096.1419011022.90640-1.8320033.5971030.62670HepG2RPS10
TOP2AENSG00000131747.101022.600909847.23510-3.2675080.1348077.67260HepG2RPS19
TOP2AENSG00000131747.104791.5494014600.80180-1.6075018.6585016.72700HepG2RPS2
TOP2AENSG00000131747.101180.442306038.38840-2.3548013.1055011.41560HepG2RPS3A
TOP2AENSG00000131747.109410.5785014903.13200-0.663305.045503.58200HepG2RPS5
TOP2AENSG00000131747.101016.483409648.32010-3.24670150.20690146.14660HepG2RRP9
TOP2AENSG00000131747.108337.5181012208.49040-0.550203.821802.01610HepG2RTF1
TOP2AENSG00000131747.1010314.5002012403.87800-0.266106.505505.58020HepG2SAFB2
TOP2AENSG00000131747.103721.016009884.07730-1.4094022.9179020.44460HepG2SERBP1
TOP2AENSG00000131747.104164.4961010790.90080-1.3736023.5152021.48670HepG2SF3A3
TOP2AENSG00000131747.104105.0453011127.06990-1.4386024.3799022.52810HepG2SF3B1
TOP2AENSG00000131747.104090.356907553.75820-0.8850044.1276042.31140HepG2SF3B4
TOP2AENSG00000131747.1011360.9518017916.67120-0.6572018.1476016.64700HepG2SLBP
TOP2AENSG00000131747.106748.1281014464.96660-1.10000123.25610120.39330HepG2SMN1
TOP2AENSG00000131747.105761.7952011442.93830-0.9899012.6843010.57430HepG2SMNDC1
TOP2AENSG00000131747.107062.8344015515.24790-1.135404.539502.77100HepG2SNRNP200
TOP2AENSG00000131747.102766.0674012381.00320-2.1622037.3749034.58350HepG2SNRNP70
TOP2AENSG00000131747.102748.9405019703.62990-2.84150246.39950243.65740HepG2SRFBP1
TOP2AENSG00000131747.106134.7113012040.69460-0.9729017.6358014.31380HepG2SRP68
TOP2AENSG00000131747.1014453.031407884.407300.8742056.1896054.66750HepG2SRSF1
TOP2AENSG00000131747.107784.9993011974.24610-0.621205.915704.40840HepG2SRSF3
TOP2AENSG00000131747.108164.1909018449.88580-1.1762090.2941087.51040HepG2SRSF5
TOP2AENSG00000131747.103552.724508903.91670-1.3255095.6040093.00130HepG2SRSF7
TOP2AENSG00000131747.102578.780606414.31560-1.3146097.2507094.97440HepG2SRSF9
TOP2AENSG00000131747.108046.0075017107.83840-1.0883068.0737066.39580HepG2SSB
TOP2AENSG00000131747.105405.3914010060.60900-0.896203.909602.46070HepG2STAU1
TOP2AENSG00000131747.103020.832205254.52900-0.798603.213702.02100HepG2STIP1
TOP2AENSG00000131747.106441.5190010486.19210-0.703005.924804.18020HepG2SUB1
TOP2AENSG00000131747.1014008.0197020983.14220-0.5830026.7772025.16820HepG2SUCLG1
TOP2AENSG00000131747.102152.309204956.39160-1.203407.691105.51340HepG2SUGP2
TOP2AENSG00000131747.104398.4029010170.46730-1.2093011.355109.57040HepG2SUPT6H
TOP2AENSG00000131747.10783.9591012584.63490-4.00470232.87240228.49950HepG2SUPV3L1
TOP2AENSG00000131747.1011191.758107086.588200.6592020.5025019.17300HepG2TAF15
TOP2AENSG00000131747.102354.2540010960.08840-2.2189043.9000041.68320HepG2TARDBP
TOP2AENSG00000131747.102545.342304806.76580-0.917204.236902.93410HepG2TBRG4
TOP2AENSG00000131747.101316.724508435.34830-2.67950106.85630102.51170HepG2TFIP11
TOP2AENSG00000131747.101432.0410013533.90660-3.2404099999.9999999999.99999HepG2TIAL1
TOP2AENSG00000131747.107701.0707011267.41660-0.549004.114702.34560HepG2TRA2A
TOP2AENSG00000131747.101966.7323013655.09780-2.7956099999.9999999999.99999HepG2TRIM56
TOP2AENSG00000131747.1012656.4642018255.37630-0.528406.750705.29320HepG2TUFM
TOP2AENSG00000131747.104674.1829012882.03870-1.4626018.0590016.39950HepG2U2AF1
TOP2AENSG00000131747.101734.8013018071.24600-3.3809027.3637024.03270HepG2U2AF2
TOP2AENSG00000131747.1010345.2886019322.46410-0.9013017.2261015.13540HepG2UBE2L3
TOP2AENSG00000131747.101109.351907434.47710-2.74450125.76270121.41930HepG2UCHL5
TOP2AENSG00000131747.101877.359509569.90760-2.3498076.0721073.55590HepG2UPF1
TOP2AENSG00000131747.104919.5387011525.00670-1.2282018.2140015.64640HepG2UPF2
TOP2AENSG00000131747.103739.203009836.31400-1.3954029.5084026.72520HepG2UTP18
TOP2AENSG00000131747.103177.047309239.32630-1.5401052.2711050.18400HepG2UTP3
TOP2AENSG00000131747.103398.897905408.89100-0.670302.534201.49200HepG2XPO5
TOP2AENSG00000131747.106739.7085012388.17770-0.8782015.9872014.27600HepG2XRN2
TOP2AENSG00000131747.108326.161509784.91650-0.232905.173804.30460HepG2ZC3H8
TOP2AENSG00000131747.10622.0406010525.02640-4.08070182.68860180.27600HepG2ZNF622
TOP2AENSG00000131747.1030241.4626020484.275300.5619024.3461022.77870K562AGGF1
TOP2AENSG00000131747.1025450.7019021315.010900.255702.579601.94780K562AKAP8L
TOP2AENSG00000131747.1023393.9018028356.75080-0.277603.320701.95800K562APOBEC3C
TOP2AENSG00000131747.1027163.2097022364.943800.280303.923802.81790K562ATP5C1
TOP2AENSG00000131747.1012013.9648013856.99550-0.205903.498102.41360K562BCLAF1
TOP2AENSG00000131747.1011095.6392013994.94280-0.334903.238902.29300K562BOP1
TOP2AENSG00000131747.104856.128006367.30420-0.390904.080102.75110K562CCAR1
TOP2AENSG00000131747.1018069.0759024479.20270-0.438004.392702.86690K562CCDC124
TOP2AENSG00000131747.1017002.2456022756.54680-0.420605.308903.54940K562CIRBP
TOP2AENSG00000131747.1012374.0508014880.61280-0.266103.024902.20580K562CPSF6
TOP2AENSG00000131747.1030499.1741024033.677200.343603.710902.00970K562DDX19B
TOP2AENSG00000131747.1010466.1827012151.38980-0.215403.138101.71890K562DDX27
TOP2AENSG00000131747.1012180.2756016593.52350-0.446106.353904.69580K562DDX3X
TOP2AENSG00000131747.1012380.9285023190.39150-0.9054035.6838033.61360K562DDX47
TOP2AENSG00000131747.105271.602106847.12400-0.377304.093802.43630K562DNAJC21
TOP2AENSG00000131747.108916.8851011608.54100-0.380603.739102.66530K562EFTUD2
TOP2AENSG00000131747.1013271.1421018227.96140-0.457906.977405.01450K562EIF2S1
TOP2AENSG00000131747.1013588.6204015808.58910-0.218303.028102.28120K562EIF2S2
TOP2AENSG00000131747.103155.587706476.76660-1.0374010.555808.56780K562EIF3A
TOP2AENSG00000131747.106837.2243012429.95280-0.8623012.4971010.12420K562EIF3D
TOP2AENSG00000131747.108641.0947015019.51920-0.7976018.7950016.65780K562EIF3G
TOP2AENSG00000131747.107982.2756017336.66140-1.1190019.9558017.53140K562EIF4A3
TOP2AENSG00000131747.1027770.1298032137.28280-0.210703.292302.27020K562EIF4G2
TOP2AENSG00000131747.1011272.6868015058.81090-0.417805.193804.00780K562FIP1L1
TOP2AENSG00000131747.1010253.3265012833.15030-0.323802.713201.80710K562FTO
TOP2AENSG00000131747.1010891.5787018029.48860-0.7271014.8400013.55110K562FXR1
TOP2AENSG00000131747.1028948.6291020017.788400.532104.526103.57420K562G3BP2
TOP2AENSG00000131747.109492.5546014207.30180-0.5818010.431408.87000K562GPKOW
TOP2AENSG00000131747.1010296.1447021067.38900-1.0329019.9338017.80490K562GRSF1
TOP2AENSG00000131747.1013690.0509017497.82140-0.354002.696301.63810K562HNRNPA1
TOP2AENSG00000131747.106870.0973012237.56230-0.8329022.7226021.09290K562HNRNPC
TOP2AENSG00000131747.1015731.1676020958.67610-0.413906.060404.43470K562HNRNPL
TOP2AENSG00000131747.107437.2621012386.19090-0.7359010.681108.56790K562HNRNPM
TOP2AENSG00000131747.1013856.9046020416.40470-0.559108.708607.31250K562HSPD1
TOP2AENSG00000131747.1017188.8628021592.91320-0.329103.530802.14500K562IGF2BP3
TOP2AENSG00000131747.104716.662306652.10650-0.496005.417403.33630K562ILF3
TOP2AENSG00000131747.1031500.4499022619.874400.477703.532102.58790K562KIF1C
TOP2AENSG00000131747.107852.5387012131.32000-0.627506.244404.77990K562KRR1
TOP2AENSG00000131747.1011959.1317022314.66140-0.8999022.9805020.36450K562MAGOH
TOP2AENSG00000131747.1016886.3145022270.34950-0.399305.346604.00720K562MATR3
TOP2AENSG00000131747.1010762.7867013867.92100-0.365704.816303.64060K562METAP2
TOP2AENSG00000131747.1013947.7435016757.09230-0.264704.318403.32620K562MTPAP
TOP2AENSG00000131747.1026480.6789017761.612000.576102.739401.86190K562NAA15
TOP2AENSG00000131747.1029361.9884019705.863500.575202.634101.67300K562PABPN1
TOP2AENSG00000131747.1013433.4915019855.67280-0.563709.984508.08130K562PCBP2
TOP2AENSG00000131747.109466.5028011324.36990-0.258503.035402.19580K562POLR2G
TOP2AENSG00000131747.1011123.5663017094.87900-0.619909.894308.06600K562PPIG
TOP2AENSG00000131747.107135.6087011296.42850-0.6628010.852209.35420K562PRPF8
TOP2AENSG00000131747.108401.7595010972.28240-0.385102.653601.77110K562PSIP1
TOP2AENSG00000131747.1010407.0173021679.62050-1.0588031.6741029.49300K562PTBP1
TOP2AENSG00000131747.1025506.9650035063.68200-0.459107.558106.20710K562PUF60
TOP2AENSG00000131747.1027080.9771036542.27790-0.4323011.690909.72100K562PUM2
TOP2AENSG00000131747.1029902.7672021137.257400.500406.938906.12460K562PUS1
TOP2AENSG00000131747.1032071.4000020596.220500.6388020.4619018.79820K562RBM15
TOP2AENSG00000131747.1014500.4563020791.60770-0.519907.655006.16770K562RBM22
TOP2AENSG00000131747.1015407.3135020265.21740-0.395404.040202.26150K562RBM34
TOP2AENSG00000131747.106655.7652010010.91050-0.5889012.5188010.40250K562RCC2
TOP2AENSG00000131747.1013674.8071021879.03670-0.6780010.830008.62640K562NELFE
TOP2AENSG00000131747.1016368.3095020327.05200-0.312503.594301.64540K562RECQL
TOP2AENSG00000131747.105009.6101011507.20760-1.1998024.4971022.11490K562RPS19
TOP2AENSG00000131747.1010338.3441020466.58300-0.9853017.9065015.26960K562RPS3
TOP2AENSG00000131747.107508.1477010090.06250-0.426406.159504.54020K562SAFB
TOP2AENSG00000131747.1014647.2250018372.26210-0.326905.694604.55600K562SF3A3
TOP2AENSG00000131747.108773.3023013511.72630-0.623007.793506.11120K562SF3B1
TOP2AENSG00000131747.1010484.4178020816.30300-0.9895036.4848033.16670K562SF3B4
TOP2AENSG00000131747.107647.982209490.06270-0.311303.201902.07910K562SRFBP1
TOP2AENSG00000131747.1013843.9252021252.54920-0.6184013.8585012.27520K562SRSF1
TOP2AENSG00000131747.1014845.7407019759.97030-0.412506.510504.77560K562SRSF4
TOP2AENSG00000131747.1017928.6532015492.507700.210602.569401.34070K562SSB
TOP2AENSG00000131747.108068.5993010938.32050-0.439004.081502.82810K562SUPV3L1
TOP2AENSG00000131747.1010476.4787021510.48950-1.0379018.8690016.70500K562TARDBP
TOP2AENSG00000131747.1015889.8906020748.89600-0.384905.017303.86350K562TIA1
TOP2AENSG00000131747.107946.8285011211.85240-0.496607.204305.52350K562TRIM56
TOP2AENSG00000131747.1012876.7214020040.89290-0.6382015.9362013.97520K562U2AF2
TOP2AENSG00000131747.1016187.2774019740.90680-0.286306.672905.61080K562UPF1
TOP2AENSG00000131747.108367.0204017566.01160-1.0700084.5886081.59410K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TOP2A is not available on ENCORE database.





7 RBPs can affect the splicing of TOP2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETOP2AENSG00000131747.10chr17-385483193854836338547757385478923854846938548593-0.073000.000000.00000excludedK562SF3B4
SETOP2AENSG00000131747.10chr17-385483193854836338547757385478923854846938548593-0.094000.000000.00000excludedK562PRPF8
SETOP2AENSG00000131747.10chr17-385483193854836338547757385478923854846938548593-0.216000.000000.00000excludedK562AQR
SETOP2AENSG00000131747.10chr17-385567803855680638556460385566613855710138557333-0.062000.000000.00000excludedK562AQR
SETOP2AENSG00000131747.10chr17-385694463856954438569010385692233856973138569877-0.062000.000000.00000excludedK562AQR
SETOP2AENSG00000131747.10chr17-385673603856743538564743385648823856760538567707-0.091000.000000.00019excludedK562SUPV3L1
SETOP2AENSG00000131747.10chr17-385483193854836338547757385478923854846938548593-0.081000.000000.00000excludedK562U2AF1
SETOP2AENSG00000131747.10chr17-385483193854836338547757385478923854846938548593-0.205000.000000.00000excludedK562U2AF2
A3SSTOP2AENSG00000131747.10chr17-3857267338572786385726733857276438572991385732060.061000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-3854775738548003385477573854789238548319385483630.063000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-3855678038556994385567803855691538557101385573330.061000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-3856104238561287385610423856113538562635385627450.051000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-3855646038556703385564603855666138556780385568060.074000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-3854581338545938385458133854589938546216385464450.068000.000000.00000longerK562AQR
A3SSTOP2AENSG00000131747.10chr17-385477573854800338547757385478923854846938548593-0.246000.000080.00071shorterK562AQR
MXETOP2AENSG00000131747.10chr17-38572256385723203857267338572786385697313856987738572991385731470.064000.000000.000001includedK562AQR
MXETOP2AENSG00000131747.10chr17-3855170038551791385525343855271738548836385489893855480938554893-0.182000.000000.000002includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TOP2A is not avaliable on ENCORE database.