NUP35

General Information

Gene Name       : NUP35
Gene ID             : ENSG00000163002.12
Essential Gene : No

Functions

Localization(RBPImage: NUP35)

Domains (AlphaFold: NUP35)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NUP35ENSG00000163002.1221.4117.2019.30ENCSR000AEF
HepG2NUP35ENSG00000163002.1229.9444.9337.44ENCSR985KAT
K562NUP35ENSG00000163002.1228.3329.4228.88ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq NUP35-BGKLV38-K562ENCSR953IQFNUP35K562ReleasedENCSR260BQC   shRNAKD% = 83.1,84.6
knockdown followed by RNA-seq NUP35-BGHLV27-HepG2ENCSR457WBKNUP35HepG2ReleasedENCSR960MSV   shRNAKD% = 58.5,69.3






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
NUP35ENCAB697LIXA301-781A1BGHLV27-39, Released, ENCODE3BGKLV38-41, Released, ENCODE3
NUP35ENCAB117HMCA301-781A2Released, ENCODE4BGHLV27-39, Released, ENCODE3BGKLV38-41, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
NUP35K562shRNABGKLV38-39,BGKLV38-40BGKLV38-1,BGKLV38-24.3,0.0NotSatisfiedENCODE3
NUP35K562shRNAENCSR953IQFENCSR260BQCNUP35-BGKLV38-41C,NUP35-BGKLV38-42CNT-BGKLV38-1C,NT-BGKLV38-2C83.1,84.6ReleasedENCODE4
NUP35K562shRNABGKLV38-43,BGKLV38-44BGKLV38-1,BGKLV38-28.2,0.0NotSatisfiedENCODE3
NUP35K562shRNABGKLV38-45,BGKLV38-46BGKLV38-1,BGKLV38-20.0,0.0NotSatisfiedENCODE3
NUP35HepG2shRNABGHLV18-35,BGHLV18-36BGHLV18-1,BGHLV18-2NotSatisfiedENCODE3
NUP35HepG2shRNABGHLV20-45,BGHLV20-46BGHLV20-1,BGHLV20-2NotSatisfiedENCODE3
NUP35HepG2shRNAENCSR457WBKENCSR960MSVNUP35_BGHLV27-39B,NUP35_BGHLV27-40BNT_BGHLV27-1B,NT_BGHLV27-2B58.5,69.3ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    NUP35: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Cytoplasm
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    NUP35Product_ID: A301-781A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: NUP35-human    		 NUP35-HEPG2_Secondary_Western.png<br>Caption: Western blot following shRNA against NUP35 in HepG2 whole cell lysate using NUP35 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against NUP35.NUP35 protein appears as the green band, Tubulin serves as a control and appears in red.
    		 Bethyl_A301-781A_2_NUP35.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the NUP35 specific antibody, A301-781A. Lane 1 is 2.5% of five million whole cell lysate input. Lanes 2 and 3 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the NUP35-specific antibody, A301-781A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 NUP35-k562.png<br>Caption: Western blot following shRNA against NUP35 in k562 whole cell lysate using NUP35 specific antibody. Lane 1 is a ladder, lane 2 is k562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against NUP35. NUP35 protein appears as the green band, Tubulin serves as a control and appears in red.
    NUP35-K562-A301-781A.png<br>Caption: Western blot following shRNA against NUP35 in K562 whole cell lysate using NUP35 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNA against NUP35. NUP35 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








    RNA Targets

    • eCLIP assay for NUP35 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • NUP35 RNA is bound by 16 proteins.  







    eCLIP assay for NUP35 is not avaliable on ENCORE database.





    16 proteins are bound to NUP35 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr2184023080184023138+3'-UTR,CDS4.326265.36555HepG2BCLAF1
    chr2184024266184024379+3'-UTR,CDS3.073096.09950HepG2BCLAF1
    chr2184025786184025898+3'-UTR,CDS4.314727.53358HepG2BCLAF1
    chr2183993181183993251+5'-UTR,CDS,intron-Proximal3.916114.98250K562AQR
    chr2183989190183989227+5'-UTR,CDS,intron-Distal,intron-Proximal3.391903.76820HepG2NCBP2
    chr2183995188183995304+5'-UTR,CDS,intron-Proximal4.428578.41475HepG2BCLAF1
    chr2183995130183995188+5'-UTR,CDS,intron-Proximal4.502465.52476K562BUD13
    chr2184022171184022225+CDS,intron-Proximal3.274864.74886HepG2BCLAF1
    chr2183997825183997957+intron-Distal4.265048.75493K562KHSRP
    chr2184012103184012153+intron-Distal4.601884.27460K562HNRNPM
    chr2184010374184010435+intron-Distal3.721203.29026K562KHDRBS1
    chr2184006841184006909+intron-Distal3.164773.14999K562EXOSC5
    chr2184006592184006644+intron-Distal3.346763.84798HepG2MATR3
    chr2184012805184012833+intron-Distal3.092573.91899K562EXOSC5
    chr2184013038184013061+intron-Distal4.509025.44433K562EXOSC5
    chr2183995281183995392+intron-Distal,intron-Proximal4.130367.05160K562PRPF8
    chr2183996485183996576+intron-Distal4.113453.73609HepG2KHSRP
    chr2184015055184015144+intron-Distal4.248554.75572K562MATR3
    chr2184011642184011679+intron-Distal3.129574.19308K562EXOSC5
    chr2184016814184016883+intron-Distal5.475295.57507HepG2HNRNPL
    chr2184008074184008167+intron-Distal3.432764.35402HepG2SUGP2
    chr2184012102184012113+intron-Distal5.5739524.03540K562EXOSC5
    chr2184013208184013261+intron-Distal3.753547.26439K562EXOSC5
    chr2184012190184012242+intron-Distal3.5731310.70963K562EXOSC5
    chr2183996475183996595+intron-Distal3.8737811.21801K562KHSRP
    chr2184012102184012154+intron-Distal3.897453.07980HepG2HNRNPM
    chr2184006731184006799+intron-Distal5.133516.41216K562EXOSC5
    chr2184012113184012148+intron-Distal5.1189825.14216K562EXOSC5
    chr2184012925184012963+intron-Distal5.126757.38693K562EXOSC5
    chr2184016674184016795+intron-Distal3.529146.07860K562HNRNPL
    chr2184012656184012701+intron-Distal4.175956.71166K562EXOSC5
    chr2184008075184008253+intron-Distal3.458653.90822HepG2HNRNPM
    chr2184002103184002145+intron-Distal3.487833.57996HepG2XPO5
    chr2184012296184012335+intron-Distal4.143537.61465K562EXOSC5
    chr2184023158184023271+intron-Distal,intron-Proximal4.065884.37030K562KHSRP
    chr2184016560184016625+intron-Distal4.369903.71677HepG2HNRNPL
    chr2184003572184003705+intron-Distal3.222393.34940K562HNRNPM
    chr2184012754184012780+intron-Distal3.999975.80937K562EXOSC5
    chr2184011913184011954+intron-Distal3.482566.13002K562EXOSC5
    chr2184016826184016872+intron-Distal4.679037.01052K562HNRNPL
    chr2183995276183995360+intron-Proximal3.942344.15711K562AQR
    chr2183998381183998444+intron-Proximal3.002263.06355HepG2KHSRP
    chr2183998379183998433+intron-Proximal5.6752314.73881HepG2TIAL1
    chr2183998386183998424+intron-Proximal6.5893527.58135K562TIA1
    chr2183998381183998442+intron-Proximal3.717886.30554K562U2AF2
    chr2183998381183998431+intron-Proximal3.839673.84732HepG2TIA1
    chr2183998424183998445+intron-Proximal5.0899518.24536K562TIA1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for NUP35 is not avaliable on ENCORE database.



    Diffrential Expression
    • 536 differentially expressed genes after Knockdown/Knockout NUP35 protein.  





    • 86 RBPs can affect the levels of NUP35.  







    536 differentially expressed genes after Knockdown/Knockout NUP35 protein :

    Only display 100 entries as example. Please click "View All" button to see all 536 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    ARHGAP33ENSG00000004777.14134.94480211.04900-0.645203.079201.38350HepG2NUP35
    LUC7LENSG00000007392.121330.441301765.56100-0.408203.878901.97270HepG2NUP35
    AASSENSG00000008311.10310.39370565.04760-0.864308.822206.26060HepG2NUP35
    NCAPD2ENSG00000010292.81478.800202485.15320-0.7489012.020709.13820HepG2NUP35
    ANLNENSG00000011426.6623.692601240.54350-0.9921016.0666012.79290HepG2NUP35
    TACC3ENSG00000013810.14328.35780596.65610-0.861609.024406.44290HepG2NUP35
    CYP24A1ENSG00000019186.5302.58510121.015401.3221011.546108.71470HepG2NUP35
    CD74ENSG00000019582.102092.041101573.115100.411204.186302.21380HepG2NUP35
    DEPDC1ENSG00000024526.12164.98710347.61660-1.075109.485306.86100HepG2NUP35
    UBA6ENSG00000033178.81366.842401748.02070-0.354903.055101.36380HepG2NUP35
    TMSB10ENSG00000034510.47391.225904826.805300.614603.242001.51230HepG2NUP35
    TIMP2ENSG00000035862.82901.020201796.122500.691602.976201.31110HepG2NUP35
    VCANENSG00000038427.111523.368801092.016700.480204.985402.86420HepG2NUP35
    CDH1ENSG00000039068.141199.27610845.923600.503503.687301.82080HepG2NUP35
    CPENSG00000047457.939699.8826049903.07410-0.330003.565101.73850HepG2NUP35
    NFE2L3ENSG00000050344.8481.65560335.184900.522903.349801.58530HepG2NUP35
    PRSS8ENSG00000052344.11801.54830470.567700.768307.564705.10640HepG2NUP35
    FNIP2ENSG00000052795.82298.416403229.60640-0.490706.216103.90760HepG2NUP35
    MSMO1ENSG00000052802.86249.353404858.880700.363003.870101.96530HepG2NUP35
    DCBLD2ENSG00000057019.113358.935602490.938500.431204.851002.75400HepG2NUP35
    CASP8ENSG00000064012.17820.38410618.398000.407703.020701.33970HepG2NUP35
    NGFRENSG00000064300.4250.27910155.431900.687203.682101.81690HepG2NUP35
    CTSAENSG00000064601.124692.519803542.472500.405504.378202.36710HepG2NUP35
    SUGP2ENSG00000064607.122625.657903301.99370-0.330703.008601.33100HepG2NUP35
    BCAS1ENSG00000064787.8207.49500105.725100.972703.485501.67750HepG2NUP35
    MYLKENSG00000065534.14532.45900733.10260-0.461303.720601.84880HepG2NUP35
    KDM4AENSG00000066135.8711.60080532.444200.418303.062201.37000HepG2NUP35
    ASPMENSG00000066279.12507.473901127.11310-1.1512020.2512016.46550HepG2NUP35
    THUMPD1ENSG00000066654.81175.077101588.56210-0.435004.179102.21380HepG2NUP35
    DDX3YENSG00000067048.124950.423806319.91880-0.352403.749201.86530HepG2NUP35
    SP100ENSG00000067066.12483.36460306.470600.657305.186703.02430HepG2NUP35
    RHOAENSG00000067560.63805.987205389.99530-0.502006.701904.33130HepG2NUP35
    PRR11ENSG00000068489.8547.43540992.28900-0.8581011.600808.75710HepG2NUP35
    NUCKS1ENSG00000069275.123393.196305036.34580-0.569708.125105.60390HepG2NUP35
    RORAENSG00000069667.111776.759502361.74700-0.410603.858101.95470HepG2NUP35
    SLC12A3ENSG00000070915.5124.13980303.20990-1.2884010.033707.34500HepG2NUP35
    HMMRENSG00000072571.15226.23820386.42700-0.772405.755503.50650HepG2NUP35
    MCM2ENSG00000073111.9341.79180538.91170-0.656904.548902.50760HepG2NUP35
    SEMA3AENSG00000075213.6145.9933076.678400.928903.904901.98850HepG2NUP35
    GTSE1ENSG00000075218.14131.30040230.05340-0.809104.526502.48900HepG2NUP35
    ZNF638ENSG00000075292.142871.275703669.64190-0.353903.505501.68960HepG2NUP35
    SPAG5ENSG00000076382.12300.45030558.66630-0.894909.513806.88190HepG2NUP35
    PPP1R12BENSG00000077157.16535.82140754.63400-0.494004.217702.23660HepG2NUP35
    DNAJC10ENSG00000077232.122930.590202116.630500.469304.068802.12510HepG2NUP35
    FBLN1ENSG00000077942.132817.266403578.23040-0.345003.425701.63240HepG2NUP35
    FDFT1ENSG00000079459.89891.959807896.132100.325003.248401.51580HepG2NUP35
    KIF22ENSG00000079616.8425.68960698.82540-0.715107.102004.68740HepG2NUP35
    EPB41L2ENSG00000079819.125598.939107029.36260-0.328203.410701.62290HepG2NUP35
    RFX3ENSG00000080298.11427.38140579.20450-0.438502.988701.31710HepG2NUP35
    NDC80ENSG00000080986.8107.67100206.30680-0.938205.231303.06110HepG2NUP35
    AFPENSG00000081051.3576451.33430301506.709700.9349024.0623019.97560HepG2NUP35
    C1QTNF3ENSG00000082196.16122.44790200.88480-0.714203.378601.60380HepG2NUP35
    MAP3K4ENSG00000085511.15983.143801288.99580-0.390803.283901.54360HepG2NUP35
    RAD54LENSG00000085999.787.05370172.77980-0.989004.789602.71160HepG2NUP35
    AURKAENSG00000087586.13703.372101192.59840-0.7617010.043907.34640HepG2NUP35
    TPX2ENSG00000088325.111493.416102564.98540-0.7803013.1305010.08520HepG2NUP35
    TRMT6ENSG00000089195.10628.03910453.150200.470803.442701.64390HepG2NUP35
    BIRC5ENSG00000089685.10369.97420566.77290-0.615305.022602.89250HepG2NUP35
    CHRDENSG00000090539.111217.456801651.48550-0.439904.262902.27320HepG2NUP35
    KIF4AENSG00000090889.10224.26290412.02160-0.877507.615305.14150HepG2NUP35
    CMTM6ENSG00000091317.7742.580201117.45380-0.589606.099303.79800HepG2NUP35
    TFENSG00000091513.10254018.72820189572.001400.422105.381603.18700HepG2NUP35
    ORC6ENSG00000091651.4138.78860251.51590-0.857805.043702.90600HepG2NUP35
    HAUS4ENSG00000092036.12415.76190574.44490-0.466403.163501.44700HepG2NUP35
    G2E3ENSG00000092140.10814.352801221.99260-0.585506.273303.95750HepG2NUP35
    CBX5ENSG00000094916.91105.897901636.40500-0.565306.502504.15220HepG2NUP35
    ERMP1ENSG00000099219.92371.425203537.06860-0.576808.304105.76770HepG2NUP35
    CRKLENSG00000099942.82531.311103256.59230-0.363503.687701.82080HepG2NUP35
    SH3BP1ENSG00000100092.16456.68320694.16950-0.604105.610203.37500HepG2NUP35
    MCM5ENSG00000100297.11351.67540581.97680-0.726706.507204.15220HepG2NUP35
    CDKN3ENSG00000100526.15211.94120318.06490-0.585703.327001.57380HepG2NUP35
    C14orf105ENSG00000100557.551.7805019.806101.386403.005701.32940HepG2NUP35
    ITPK1ENSG00000100605.12604.42960845.24380-0.483803.297601.55340HepG2NUP35
    HIF1AENSG00000100644.126198.544004976.595100.316703.022201.34030HepG2NUP35
    MTHFD1ENSG00000100714.111059.628901421.27550-0.423603.890301.97960HepG2NUP35
    GINS1ENSG00000101003.8157.11870282.61950-0.847005.384803.18750HepG2NUP35
    ZMYND8ENSG00000101040.157178.649809157.11500-0.351203.909401.99010HepG2NUP35
    SGK2ENSG00000101049.10454.75640208.538601.1247012.174309.26380HepG2NUP35
    MYBL2ENSG00000101057.11474.49640655.27270-0.465703.329501.57380HepG2NUP35
    NFATC2ENSG00000101096.15623.91340828.62870-0.409403.017001.33780HepG2NUP35
    CDC25BENSG00000101224.13591.628001066.82340-0.8506012.097009.20070HepG2NUP35
    TRIB3ENSG00000101255.63793.582702476.693700.615006.128403.82340HepG2NUP35
    FAM83DENSG00000101447.9246.21460446.21100-0.857807.780005.29540HepG2NUP35
    MYOM1ENSG00000101605.8204.90300307.93470-0.587703.366501.59770HepG2NUP35
    LIPGENSG00000101670.7508.83670205.836701.305605.832103.57440HepG2NUP35
    FMR1ENSG00000102081.92092.485203602.90300-0.7839014.3968011.26440HepG2NUP35
    TIMP1ENSG00000102265.7547.44960324.968500.752304.917602.80640HepG2NUP35
    IL21RENSG00000103522.11184.4680065.555001.492505.831703.57440HepG2NUP35
    CCP110ENSG00000103540.12726.147001006.81160-0.471504.176902.21380HepG2NUP35
    CEP152ENSG00000103995.9138.84130279.23700-1.008107.458205.01500HepG2NUP35
    IMPAD1ENSG00000104331.43074.247603988.33360-0.375603.998602.06270HepG2NUP35
    CHN2ENSG00000106069.16747.084701001.49400-0.422803.494001.68090HepG2NUP35
    FKBP14ENSG00000106080.6547.91110862.32900-0.654302.979501.31280HepG2NUP35
    CYP3A5ENSG00000106258.9427.53530225.520100.922708.457905.91530HepG2NUP35
    TFR2ENSG00000106327.83102.811704278.57530-0.463605.754303.50650HepG2NUP35
    AGR2ENSG00000106541.7128.1061020.398902.6507012.390209.43390HepG2NUP35
    SMC3ENSG00000108055.91848.674602360.99830-0.352903.191601.47040HepG2NUP35
    KRT23ENSG00000108244.12661.61610389.791400.763203.462201.65770HepG2NUP35
    DHX58ENSG00000108771.8148.4030084.750900.808103.238701.51000HepG2NUP35
    VTNENSG00000109072.95417.882104228.081900.357603.585001.75360HepG2NUP35
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    86 RBPs can affect the gene expression of NUP35 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    NUP35ENSG00000163002.8241.96570374.52400-0.630305.375104.58240HepG2ACO1
    NUP35ENSG00000163002.8176.45810530.24060-1.5873016.1200014.94580HepG2AKAP1
    NUP35ENSG00000163002.8411.74920649.45600-0.657508.078607.00530HepG2AUH
    NUP35ENSG00000163002.8243.41990393.68200-0.693604.003702.93990HepG2BCLAF1
    NUP35ENSG00000163002.8352.67230501.09170-0.506703.291402.64500HepG2BOP1
    NUP35ENSG00000163002.8287.32000374.43690-0.382102.436601.80430HepG2CKAP4
    NUP35ENSG00000163002.8253.03530460.02230-0.862407.045905.98790HepG2CPSF6
    NUP35ENSG00000163002.8418.34920593.41100-0.504304.834704.02890HepG2CELF1
    NUP35ENSG00000163002.8309.56000445.44130-0.525002.456701.72390HepG2DDX55
    NUP35ENSG00000163002.8312.08880522.39150-0.743203.690802.56420HepG2DDX59
    NUP35ENSG00000163002.8195.90870436.25890-1.155009.487408.41640HepG2DDX6
    NUP35ENSG00000163002.8156.54600419.48590-1.4220013.6462012.39710HepG2EIF2S1
    NUP35ENSG00000163002.8269.44400463.62950-0.783005.332904.44570HepG2EIF4A3
    NUP35ENSG00000163002.8294.83150603.03100-1.0323011.9046010.28880HepG2EIF4G2
    NUP35ENSG00000163002.8500.72880745.62780-0.574406.421905.56820HepG2ETF1
    NUP35ENSG00000163002.8222.14500460.82570-1.052704.392703.12080HepG2FTO
    NUP35ENSG00000163002.8298.67580433.87850-0.538702.934702.25070HepG2G3BP1
    NUP35ENSG00000163002.8254.89850521.45150-1.032608.186507.12710HepG2GPKOW
    NUP35ENSG00000163002.8269.19620357.55980-0.409502.656501.69650HepG2HDGF
    NUP35ENSG00000163002.8472.90020586.43270-0.310402.231501.38260HepG2HNRNPA2B1
    NUP35ENSG00000163002.8146.20320410.90340-1.4908016.0655014.52960HepG2HNRNPC
    NUP35ENSG00000163002.8339.90850499.57130-0.555504.977804.05150HepG2HNRNPF
    NUP35ENSG00000163002.8376.53740581.32320-0.626507.881706.79740HepG2HNRNPL
    NUP35ENSG00000163002.8258.81120497.63260-0.943208.207907.18660HepG2HNRNPLL
    NUP35ENSG00000163002.8226.43040342.07490-0.595203.334802.29720HepG2HNRNPM
    NUP35ENSG00000163002.8321.15930491.93770-0.615204.933803.99260HepG2IGF2BP1
    NUP35ENSG00000163002.8249.95850441.05530-0.819305.357204.44470HepG2IGF2BP2
    NUP35ENSG00000163002.8507.55670708.58040-0.481402.622701.81470HepG2LARP4
    NUP35ENSG00000163002.8297.84760470.44140-0.659403.891303.15400HepG2MATR3
    NUP35ENSG00000163002.8468.02860632.77650-0.435103.755602.86480HepG2NOL12
    NUP35ENSG00000163002.8291.77460441.26070-0.596803.561402.71270HepG2NSUN2
    NUP35ENSG00000163002.888.79970253.69470-1.5145012.753609.72760HepG2NUP35
    NUP35ENSG00000163002.8239.38290428.93340-0.841406.251305.17830HepG2PABPC4
    NUP35ENSG00000163002.8164.02210404.04680-1.3006017.3328015.54480HepG2PARN
    NUP35ENSG00000163002.8581.13670402.987600.528002.537501.36830HepG2PRPF6
    NUP35ENSG00000163002.8345.93620444.65700-0.362202.454501.93430HepG2PTBP1
    NUP35ENSG00000163002.8323.82930604.01830-0.8994010.266109.21560HepG2PUF60
    NUP35ENSG00000163002.8446.19900640.71400-0.522004.726703.86190HepG2PUM2
    NUP35ENSG00000163002.8351.84620481.61410-0.452903.134702.47650HepG2QKI
    NUP35ENSG00000163002.8240.03910369.96240-0.624102.353501.70010HepG2RAVER1
    NUP35ENSG00000163002.8399.87280508.22650-0.345902.193601.41930HepG2RBM15
    NUP35ENSG00000163002.8299.69990437.08080-0.544403.761902.98410HepG2RBM25
    NUP35ENSG00000163002.8367.54840494.87600-0.429103.054802.49160HepG2NELFE
    NUP35ENSG00000163002.8332.25870538.12210-0.695605.789704.85380HepG2RPLP0
    NUP35ENSG00000163002.8216.01390363.34250-0.750203.845402.73230HepG2RPS10
    NUP35ENSG00000163002.8220.43120312.89760-0.505402.527201.93740HepG2RPS19
    NUP35ENSG00000163002.8690.41460424.737700.700804.504803.63350HepG2SF3A3
    NUP35ENSG00000163002.8338.92500462.97860-0.450003.295602.65670HepG2SF3B4
    NUP35ENSG00000163002.8467.07900579.10610-0.310202.468801.80040HepG2SLBP
    NUP35ENSG00000163002.8379.55750703.91010-0.8911013.9975013.10190HepG2SRFBP1
    NUP35ENSG00000163002.81144.57600483.235901.2439032.8678031.63260HepG2SRSF1
    NUP35ENSG00000163002.8346.63290596.34900-0.782709.029807.98570HepG2SRSF5
    NUP35ENSG00000163002.8259.33200490.80330-0.9203011.2898010.04850HepG2SRSF7
    NUP35ENSG00000163002.8303.34880393.12640-0.374002.462001.93440HepG2SRSF9
    NUP35ENSG00000163002.8454.58470611.18290-0.427103.773703.19540HepG2SSB
    NUP35ENSG00000163002.8385.59240245.507100.651203.918002.41020HepG2SSRP1
    NUP35ENSG00000163002.8286.96290443.44020-0.627903.275102.54650HepG2SUPV3L1
    NUP35ENSG00000163002.8276.26500485.08970-0.812206.754805.68980HepG2TARDBP
    NUP35ENSG00000163002.8200.60190297.22860-0.567202.786301.78810HepG2TFIP11
    NUP35ENSG00000163002.8223.64760396.66370-0.826707.379206.63350HepG2TIAL1
    NUP35ENSG00000163002.8320.41840400.17370-0.320701.915101.42920HepG2TRIM56
    NUP35ENSG00000163002.8459.21190590.05790-0.361702.353001.55380HepG2TUFM
    NUP35ENSG00000163002.8384.96990624.53910-0.698004.885203.75190HepG2UBE2L3
    NUP35ENSG00000163002.8235.70720376.67580-0.676305.854004.89820HepG2UPF1
    NUP35ENSG00000163002.8592.17370363.668200.703308.128907.18980HepG2UTP3
    NUP35ENSG00000163002.8257.93820414.27350-0.683606.947706.18360HepG2ZNF622
    NUP35ENSG00000163002.8577.38840406.746300.505303.544302.19200K562AARS
    NUP35ENSG00000163002.8630.61400506.754100.315402.248001.72790K562AGGF1
    NUP35ENSG00000163002.8240.35410360.04650-0.583004.446902.49280K562AKAP1
    NUP35ENSG00000163002.8763.92250527.297400.534704.617903.76680K562AKAP8L
    NUP35ENSG00000163002.8757.75550553.255800.453704.366603.19060K562ATP5C1
    NUP35ENSG00000163002.8448.57280593.10010-0.402902.644701.87630K562CPSF6
    NUP35ENSG00000163002.81074.27620778.403200.464706.209605.28770K562DDX47
    NUP35ENSG00000163002.8757.89330567.429900.417503.827802.77490K562DKC1
    NUP35ENSG00000163002.8549.65090422.370600.379902.281201.45170K562EFTUD2
    NUP35ENSG00000163002.8499.68060673.54970-0.430803.802102.98090K562EIF2S2
    NUP35ENSG00000163002.8601.87210396.389300.602406.212805.36000K562FXR1
    NUP35ENSG00000163002.8429.55390588.45740-0.454103.853602.51490K562GLRX3
    NUP35ENSG00000163002.8411.24400566.27320-0.461503.072502.23730K562GPKOW
    NUP35ENSG00000163002.8137.20240445.13460-1.6979022.1786020.56810K562HNRNPC
    NUP35ENSG00000163002.8753.20620527.354900.514202.463901.30630K562HNRNPK
    NUP35ENSG00000163002.8844.56720626.898000.429903.643802.57740K562MBNL1
    NUP35ENSG00000163002.8393.96620618.67620-0.651107.753506.45990K562MTPAP
    NUP35ENSG00000163002.8700.13250439.409100.672002.766001.88260K562NAA15
    NUP35ENSG00000163002.8562.39110687.46120-0.289702.091001.43250K562NSUN2
    NUP35ENSG00000163002.8833.13330411.012101.0193012.9204011.28930K562PRPF8
    NUP35ENSG00000163002.8678.43020539.032900.331702.288301.67700K562PTBP1
    NUP35ENSG00000163002.8948.00240522.957300.858109.927308.94580K562PUS1
    NUP35ENSG00000163002.8740.00930509.524000.538305.451104.64350K562RBM15
    NUP35ENSG00000163002.8690.96680517.029100.418302.988702.11180K562RBM22
    NUP35ENSG00000163002.8644.46580418.750000.621902.957002.11150K562RPS19
    NUP35ENSG00000163002.81009.62460528.398900.9340014.9918013.34170K562SRSF1
    NUP35ENSG00000163002.8391.08490498.64030-0.350502.489601.38350K562SRSF7
    NUP35ENSG00000163002.8593.66280445.903500.412803.031502.16870K562SYNCRIP
    NUP35ENSG00000163002.8925.96180486.290500.9290015.7005013.75980K562U2AF2
    NUP35ENSG00000163002.8514.26000728.92520-0.503305.815304.81770K562UPF1
    NUP35ENSG00000163002.8258.78500623.72560-1.2692019.6480017.36160K562WDR3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for NUP35 is not available on ENCORE database.





    2 RBPs can affect the splicing of NUP35 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SENUP35ENSG00000163002.8chr2+184024192184024380184022946184023139184025781184025972-0.074000.000460.00635excludedK562AQR
    SENUP35ENSG00000163002.8chr2+1839957221839958451839951451839952731839982931839983510.083000.002430.07645includedHepG2HNRNPC
    SENUP35ENSG00000163002.8chr2+1839957221839958451839951451839952731839982931839983510.130000.000010.00028includedK562HNRNPC
    A3SSNUP35ENSG00000163002.8chr2+1840241921840243801840242151840243801840229461840231390.159000.000000.00000longerK562AQR
    A3SSNUP35ENSG00000163002.8chr2+1840229951840231391840230101840231391840221101840222410.127000.000000.00000longerK562AQR
    A3SSNUP35ENSG00000163002.8chr2+184024215184026408184025781184026408184022946184023139-0.112000.000070.00065shorterK562AQR
    MXENUP35ENSG00000163002.8chr2+1839982931839983511840221711840222411839930141839931851840230101840231390.057000.002200.018041includedK562AQR
    MXENUP35ENSG00000163002.8chr2+1839951451839952731840221711840222411839930141839931851840230101840231390.141000.010870.067741includedK562AQR
    MXENUP35ENSG00000163002.8chr2+183998293183998351184022989184023139183995145183995273184025781184026366-0.064000.000040.000582includedK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for NUP35 is not avaliable on ENCORE database.