CCP110

General Information

Gene Name       : CCP110
Gene ID             : ENSG00000103540.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCP110)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCP110ENSG00000103540.1623.5622.3422.95ENCSR000AEF
HepG2CCP110ENSG00000103540.168.5416.7212.63ENCSR985KAT
K562CCP110ENSG00000103540.169.1910.8410.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCP110 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCP110 RNA is bound by 6 proteins.  







eCLIP assay for CCP110 is not avaliable on ENCORE database.





6 proteins are bound to CCP110 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161955321919553356+3'-UTR,CDS3.133594.44630K562ZNF622
chr161955320719553365+3'-UTR,CDS,intron-Proximal3.758635.03335K562UCHL5
chr161956338719563453+3'-UTR4.310288.11238K562PUM2
chr161953919219539263+3'-UTR,5'-UTR,CDS3.881553.01428K562UCHL5
chr161955326719553386+3'-UTR,CDS4.5796214.65888HepG2BCLAF1
chr161954854919548593+CDS,intron-Distal3.136053.07152HepG2HLTF
chr161955611819556224+CDS,intron-Proximal3.876038.25092HepG2BCLAF1
chr161955393519554028+CDS,intron-Proximal4.240014.51739HepG2BCLAF1
chr161954840119548465+CDS,intron-Distal3.674105.26073HepG2HLTF
chr161955393819554025+CDS,intron-Proximal3.226343.34920HepG2HLTF
chr161955645519556529+CDS4.668164.34038HepG2BCLAF1
chr161954381919543866+CDS,intron-Distal4.938446.58593HepG2BCLAF1
chr161954726019547359+CDS,intron-Distal,intron-Proximal3.741308.50755HepG2BCLAF1
chr161953553619535597+intron-Distal5.6417915.89510HepG2EFTUD2
chr161953542019535536+intron-Distal,intron-Proximal5.376856.03057K562EFTUD2
chr161953547119535536+intron-Distal,intron-Proximal6.6539516.30644HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCP110 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCP110 is not available on ENCORE database.

  • 113 RBPs can affect the levels of CCP110.  








The Knockdown/knockout RNA-Seq assay for CCP110 is not available on ENCORE database.





113 RBPs can affect the gene expression of CCP110 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCP110ENSG00000103540.121104.51390729.941600.597505.116803.69920HepG2AATF
CCP110ENSG00000103540.12975.303101427.21330-0.549309.599708.45010HepG2AUH
CCP110ENSG00000103540.12625.82430867.54800-0.471202.441801.56200HepG2BCCIP
CCP110ENSG00000103540.12459.52320753.90200-0.714205.223004.02300HepG2BCLAF1
CCP110ENSG00000103540.12560.506401092.60850-0.9630014.2279013.01960HepG2BOP1
CCP110ENSG00000103540.12732.459901046.54960-0.514805.723904.66790HepG2CALR
CCP110ENSG00000103540.12388.72110814.80950-1.0677013.1871011.63810HepG2CIRBP
CCP110ENSG00000103540.12720.47400900.19480-0.321301.954501.38330HepG2CKAP4
CCP110ENSG00000103540.12705.523501003.08170-0.507704.273303.43580HepG2CPSF6
CCP110ENSG00000103540.12583.98170859.28630-0.557203.496802.25810HepG2CPSF7
CCP110ENSG00000103540.12597.33140861.56830-0.528406.135604.61630HepG2YBX3
CCP110ENSG00000103540.12860.228101254.86590-0.544708.714607.69450HepG2CELF1
CCP110ENSG00000103540.12951.711301349.49660-0.5038010.194108.91140HepG2DAZAP1
CCP110ENSG00000103540.12599.88090832.64480-0.473003.553202.62330HepG2DDX19B
CCP110ENSG00000103540.12505.42250805.58000-0.672507.025005.99530HepG2DDX21
CCP110ENSG00000103540.12489.57360992.88300-1.0201012.7467011.49520HepG2DDX3X
CCP110ENSG00000103540.12473.86030852.94310-0.848007.055705.88870HepG2DDX55
CCP110ENSG00000103540.12707.95120934.36460-0.400302.924801.88720HepG2DDX5
CCP110ENSG00000103540.12653.06130852.99210-0.385302.117301.57000HepG2DDX6
CCP110ENSG00000103540.12607.16200846.03530-0.478605.277404.33330HepG2DNAJC21
CCP110ENSG00000103540.12993.34800741.658100.421402.393301.36740HepG2AGO1
CCP110ENSG00000103540.12436.81880819.91760-0.908409.515708.45460HepG2EIF2S1
CCP110ENSG00000103540.12543.81750763.74490-0.490003.451502.44890HepG2EIF3D
CCP110ENSG00000103540.12616.73430906.06450-0.555003.973503.21190HepG2EIF4A3
CCP110ENSG00000103540.121026.135101638.69350-0.6753014.2174013.02410HepG2ETF1
CCP110ENSG00000103540.12571.11640879.82550-0.623404.694603.61140HepG2EWSR1
CCP110ENSG00000103540.12592.90640767.58760-0.372502.705801.57300HepG2FASTKD2
CCP110ENSG00000103540.12614.229801004.78520-0.710002.771001.75480HepG2FTO
CCP110ENSG00000103540.12678.80170460.013200.561202.626201.86000HepG2FUBP3
CCP110ENSG00000103540.12458.20130680.02450-0.569604.439503.29540HepG2GEMIN5
CCP110ENSG00000103540.12679.064701137.09220-0.743707.322706.31160HepG2GPKOW
CCP110ENSG00000103540.12812.719501180.83710-0.539003.453901.91280HepG2HNRNPA0
CCP110ENSG00000103540.12329.48720854.14000-1.3742023.1264021.57650HepG2HNRNPA1
CCP110ENSG00000103540.12665.86860950.05360-0.512804.542103.66900HepG2HNRNPC
CCP110ENSG00000103540.12716.22220919.75790-0.360803.389602.60180HepG2HNRNPF
CCP110ENSG00000103540.12967.315801229.35110-0.345805.139704.24400HepG2HNRNPL
CCP110ENSG00000103540.12413.902701085.14620-1.3905023.6968022.14660HepG2HNRNPLL
CCP110ENSG00000103540.12690.43510905.70770-0.391503.042102.28570HepG2IGF2BP1
CCP110ENSG00000103540.12522.95660862.03840-0.721106.839505.82340HepG2IGF2BP2
CCP110ENSG00000103540.12690.21000964.03700-0.482107.604206.45210HepG2ILF2
CCP110ENSG00000103540.12902.862601701.18910-0.9140010.201608.61190HepG2LARP4
CCP110ENSG00000103540.12420.66430799.34770-0.926206.175204.65410HepG2METAP2
CCP110ENSG00000103540.12638.26240962.17440-0.592105.489904.45350HepG2NSUN2
CCP110ENSG00000103540.12726.147001006.81160-0.471504.176902.21380HepG2NUP35
CCP110ENSG00000103540.121508.76920760.341900.9886027.3868026.01130HepG2PTBP1
CCP110ENSG00000103540.12779.160101277.32070-0.7131010.142209.09910HepG2PUF60
CCP110ENSG00000103540.12568.049201355.86480-1.2551044.2125042.42010HepG2PUM1
CCP110ENSG00000103540.12919.023401354.91640-0.560007.926906.81830HepG2PUM2
CCP110ENSG00000103540.121354.89940916.942200.563206.566705.68860HepG2PUS1
CCP110ENSG00000103540.121806.65760823.397001.1336017.4242016.04970HepG2QKI
CCP110ENSG00000103540.121541.702701251.613500.300602.750501.89600HepG2RBM15
CCP110ENSG00000103540.12704.825701369.63170-0.9584022.4891021.29840HepG2RBM22
CCP110ENSG00000103540.121022.28110747.312900.451904.317303.48980HepG2RBM25
CCP110ENSG00000103540.121999.939701348.450700.568604.027802.19410HepG2RBM47
CCP110ENSG00000103540.121074.84920846.159400.345003.594802.99470HepG2NELFE
CCP110ENSG00000103540.121273.97020788.133400.6927013.4640012.25980HepG2RECQL
CCP110ENSG00000103540.12397.19140743.13300-0.9038011.6508010.49550HepG2RPS19
CCP110ENSG00000103540.12544.879901402.16810-1.3636018.5938016.61940HepG2RPS3A
CCP110ENSG00000103540.12335.20870651.09250-0.957808.116406.85780HepG2RRP9
CCP110ENSG00000103540.12692.38470840.48360-0.279602.499501.88180HepG2SAFB2
CCP110ENSG00000103540.12555.23300745.88830-0.425902.648001.72950HepG2SERBP1
CCP110ENSG00000103540.12695.376501046.93000-0.590304.310203.45870HepG2SF3A3
CCP110ENSG00000103540.12755.150901074.09240-0.508304.541003.65440HepG2SF3B1
CCP110ENSG00000103540.12939.093401224.61280-0.383005.813104.85870HepG2SLBP
CCP110ENSG00000103540.12718.82150980.16500-0.447406.458805.54170HepG2SMN1
CCP110ENSG00000103540.12658.412101200.33820-0.866402.677801.39620HepG2SNRNP200
CCP110ENSG00000103540.12921.379001546.92580-0.7475018.6341017.63750HepG2SRFBP1
CCP110ENSG00000103540.121158.68610826.235100.487804.634904.06240HepG2SRSF1
CCP110ENSG00000103540.121099.526801261.08720-0.197801.877201.34820HepG2SRSF5
CCP110ENSG00000103540.12669.19100903.60170-0.433304.514003.65810HepG2SRSF7
CCP110ENSG00000103540.12827.79990672.207600.300302.853402.29500HepG2SRSF9
CCP110ENSG00000103540.121073.064501343.05820-0.323804.043303.44860HepG2SSB
CCP110ENSG00000103540.121880.844201434.272900.391005.194204.38780HepG2SUCLG1
CCP110ENSG00000103540.12517.59830711.48220-0.459002.965101.99420HepG2SUPT6H
CCP110ENSG00000103540.12572.86860849.14970-0.567803.427902.68460HepG2SUPV3L1
CCP110ENSG00000103540.121544.08860742.721001.0558014.5598013.42280HepG2TAF15
CCP110ENSG00000103540.12648.463701057.62610-0.705707.892906.75040HepG2TARDBP
CCP110ENSG00000103540.12388.91910569.19060-0.549403.096602.04410HepG2TFIP11
CCP110ENSG00000103540.121431.09580682.386601.0684017.1314015.12080HepG2TIA1
CCP110ENSG00000103540.12676.00530917.12470-0.440104.307903.71240HepG2TIAL1
CCP110ENSG00000103540.121413.43490941.142600.586603.874902.14550HepG2TRA2A
CCP110ENSG00000103540.12644.75550925.24570-0.521107.341606.49940HepG2TRIM56
CCP110ENSG00000103540.12801.736301398.25790-0.802402.184501.32010HepG2U2AF2
CCP110ENSG00000103540.12295.48300501.65850-0.763605.793804.68540HepG2UCHL5
CCP110ENSG00000103540.12739.38890954.35010-0.368203.732002.53420HepG2UTP18
CCP110ENSG00000103540.121292.43880921.666000.487702.702501.45820HepG2XRCC5
CCP110ENSG00000103540.12436.12920835.89300-0.938609.449708.12990HepG2XRN2
CCP110ENSG00000103540.121063.71180789.505400.430005.913104.98850HepG2ZC3H8
CCP110ENSG00000103540.12662.226601021.13650-0.6248012.0105011.07060HepG2ZNF622
CCP110ENSG00000103540.121588.332301271.925400.320404.085703.42000K562AGGF1
CCP110ENSG00000103540.121063.205801371.68340-0.367502.795002.20440K562AQR
CCP110ENSG00000103540.121236.302901542.21680-0.319003.448802.20810K562CPEB4
CCP110ENSG00000103540.12701.70750925.16540-0.398803.343102.18330K562DDX3X
CCP110ENSG00000103540.121026.386001595.77850-0.6367013.1008011.79330K562DDX47
CCP110ENSG00000103540.12536.56920721.54220-0.427302.349301.50980K562EFTUD2
CCP110ENSG00000103540.12599.08460741.15770-0.307002.370901.63150K562EIF3G
CCP110ENSG00000103540.12560.75420966.60280-0.785609.921908.35420K562EIF4A3
CCP110ENSG00000103540.12689.38100870.51010-0.336602.804901.63890K562EIF4B
CCP110ENSG00000103540.12763.460501022.08430-0.420903.439302.48580K562FIP1L1
CCP110ENSG00000103540.12747.14580981.50180-0.393602.831501.96680K562FMR1
CCP110ENSG00000103540.12705.616701005.23190-0.510606.245005.39060K562FXR1
CCP110ENSG00000103540.121536.007101027.901200.579402.153301.54080K562G3BP2
CCP110ENSG00000103540.12719.61260920.83940-0.355702.592701.82290K562GPKOW
CCP110ENSG00000103540.12676.848801189.17420-0.8131010.658309.14690K562GRSF1
CCP110ENSG00000103540.12402.37800737.90460-0.8749010.600309.49420K562HNRNPC
CCP110ENSG00000103540.121167.361801442.15980-0.305002.495301.49760K562HNRNPL
CCP110ENSG00000103540.12561.80570840.65750-0.581404.440103.24120K562HNRNPM
CCP110ENSG00000103540.12996.934201385.75930-0.475104.621003.59800K562HSPD1
CCP110ENSG00000103540.12924.847701160.83620-0.327902.631601.81160K562MAGOH
CCP110ENSG00000103540.121478.483801886.72980-0.351802.847401.69820K562MSI2
CCP110ENSG00000103540.121244.32930829.711100.584605.131303.99700K562PCBP3
CCP110ENSG00000103540.12962.36800636.430200.596504.637703.59930K562POLR2G
CCP110ENSG00000103540.12761.368601160.23690-0.607806.441505.09890K562PPIG
CCP110ENSG00000103540.12493.61130702.14000-0.508403.389302.55690K562PRPF8
CCP110ENSG00000103540.12764.766801127.79100-0.560406.827205.81870K562PTBP1
CCP110ENSG00000103540.121481.683502054.12970-0.471306.466004.77890K562PUM1
CCP110ENSG00000103540.121967.590501312.528300.584007.128806.30340K562PUS1
CCP110ENSG00000103540.121528.341301278.877100.257002.358701.80390K562RBM15
CCP110ENSG00000103540.12368.96040715.31170-0.955108.894607.41570K562RPS19
CCP110ENSG00000103540.12558.45990832.45880-0.575904.320003.03490K562RPS3
CCP110ENSG00000103540.12636.448101068.55810-0.7476011.652309.82280K562SF3B4
CCP110ENSG00000103540.12584.47640803.75670-0.459603.683402.44460K562SRSF4
CCP110ENSG00000103540.121745.840401341.070900.380403.120301.66480K562SSRP1
CCP110ENSG00000103540.12645.162501119.00910-0.794509.916708.44740K562TARDBP
CCP110ENSG00000103540.12836.767101079.38170-0.367303.210802.31990K562TIA1
CCP110ENSG00000103540.12510.64580719.61200-0.494903.248202.14030K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCP110 is not available on ENCORE database.





9 RBPs can affect the splicing of CCP110 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECCP110ENSG00000103540.12chr16+195370401953718319535132195354101953918819539344-0.383000.000230.00986excludedK562AKAP8L
SECCP110ENSG00000103540.12chr16+195592761955933619557733195577961956251719564722-0.100000.002040.02569excludedHepG2U2AF2
SECCP110ENSG00000103540.12chr16+195539421955408219553208195533861955419919554316-0.130000.000190.00293excludedK562AQR
SECCP110ENSG00000103540.12chr16+1953704019537183195351321953541019539188195393530.510000.000170.00965includedK562FXR1
SECCP110ENSG00000103540.12chr16+195598361955992219557138195572121956251719564730-0.217000.000490.00932excludedK562PUS1
SECCP110ENSG00000103540.12chr16+195370401953718319535132195354101953918819539344-0.490000.000020.00050excludedK562PUS1
SECCP110ENSG00000103540.12chr16+1953704019537183195351321953541019539188195393530.591000.000000.00007includedHepG2MATR3
SECCP110ENSG00000103540.12chr16+195577331955779619557138195572121955927619559336-0.323000.000560.01235excludedK562U2AF2
SECCP110ENSG00000103540.12chr16+195577331955779619557138195572121956251719564730-0.276000.003320.09241excludedK562TARDBP
SECCP110ENSG00000103540.12chr16+195577331955779619557138195572121956251719564722-0.249000.003840.07488excludedK562RBM15
SECCP110ENSG00000103540.12chr16+195592761955933619557138195572121956251719564722-0.444000.000010.00080excludedK562AGGF1
A3SSCCP110ENSG00000103540.12chr16+1955711019557212195571381955721219556415195565320.104000.005940.03361longerK562AQR
A3SSCCP110ENSG00000103540.12chr16+1955195919552109195519781955210919547261195489090.072000.002460.01546longerK562AQR
A3SSCCP110ENSG00000103540.12chr16+1955608419556220195561181955622019554199195543160.081000.002690.01672longerK562AQR
MXECCP110ENSG00000103540.12chr16+1955773319557796195592761955933619557138195572121956251719564722-0.301000.001680.024072includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCP110 is not avaliable on ENCORE database.