CTSA

General Information

Gene Name       : CTSA
Gene ID             : ENSG00000064601.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTSA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CTSAENSG00000064601.1823.9032.0527.97ENCSR000AEF
HepG2CTSAENSG00000064601.18226.69177.02201.86ENCSR985KAT
K562CTSAENSG00000064601.1843.5341.4842.50ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTSA is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTSA RNA is bound by 28 proteins.  







eCLIP assay for CTSA is not avaliable on ENCORE database.





28 proteins are bound to CTSA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr204452705844527154+3'-UTR,CDS3.4531123.24014HepG2LARP4
chr204452664244526727+3'-UTR,CDS,intron-Proximal3.7280722.91786HepG2RPS3
chr204452714744527206+3'-UTR3.620166.97440HepG2PABPN1
chr204452183944521879+3'-UTR,CDS,intron-Proximal3.888894.89208K562AQR
chr204452151844521567+3'-UTR,CDS,intron-Proximal4.273835.35619K562AQR
chr204452180644521882+3'-UTR,CDS,intron-Proximal3.8102910.97424HepG2SF3B4
chr204452642444526441+3'-UTR,CDS3.194906.06432HepG2SND1
chr204452664444526724+3'-UTR,CDS3.6365320.00011HepG2SND1
chr204452733744527403+3'-UTR4.427599.82827HepG2UPF1
chr204452715444527225+3'-UTR4.2467127.59905HepG2LARP4
chr204452715644527215+3'-UTR4.6046720.60642HepG2DDX55
chr204452146344521555+3'-UTR,CDS,intron-Proximal3.603354.74268K562UCHL5
chr204452733544527400+3'-UTR4.1292611.87946HepG2LARP4
chr204452145844521507+3'-UTR,CDS3.408569.40570HepG2GRWD1
chr204452150944521561+3'-UTR,CDS,intron-Proximal3.822659.36784HepG2EFTUD2
chr204452642044526448+3'-UTR,CDS,intron-Proximal4.154853.69113K562LIN28B
chr204452111944521157+3'-UTR,CDS,intron-Proximal3.550983.09957HepG2AQR
chr204452630444526368+3'-UTR,CDS,intron-Proximal4.4896618.20658HepG2SF3A3
chr204452734244527388+3'-UTR3.182338.28455HepG2DDX55
chr204452658344526669+3'-UTR,CDS,intron-Proximal3.091775.99667HepG2SF3B4
chr204452346744523540+3'-UTR,CDS,intron-Proximal3.526868.18086HepG2GRWD1
chr204452104944521093+3'-UTR,CDS3.5068213.26570HepG2SND1
chr204452098144521071+3'-UTR,CDS,intron-Proximal6.1652212.14179K562EFTUD2
chr204452149244521566+3'-UTR,CDS,intron-Proximal3.3092427.32156HepG2PRPF8
chr204452704844527130+3'-UTR,CDS3.347493.08948K562DDX55
chr204452700544527064+3'-UTR,CDS,intron-Proximal3.044148.20684HepG2RPS3
chr204452727344527334+3'-UTR5.7340810.01142HepG2UPF1
chr204452664344526705+3'-UTR,CDS,intron-Proximal4.147953.02060K562LIN28B
chr204452727644527342+3'-UTR3.8812815.19016HepG2DDX55
chr204452642744526444+3'-UTR,CDS3.229538.94758HepG2RPS3
chr204452333044523379+3'-UTR,CDS4.3459121.22339HepG2PPIG
chr204452641544526446+3'-UTR,CDS,intron-Proximal3.5100017.39320HepG2LIN28B
chr204452715044527226+3'-UTR3.7166010.90907HepG2UPF1
chr204452640244526447+3'-UTR,CDS,intron-Proximal3.490124.71645HepG2GRSF1
chr204452181444521868+3'-UTR,CDS,intron-Proximal5.3510829.70254K562SF3B4
chr204452132244521366+3'-UTR,CDS,intron-Proximal4.881448.54916K562SF3B4
chr204452726544527335+3'-UTR3.6110316.32859HepG2LARP4
chr204452136744521379+3'-UTR,CDS3.346905.82787HepG2SND1
chr204452723744527273+3'-UTR3.773513.50315HepG2UPF1
chr204452333544523375+3'-UTR,CDS4.068958.16229HepG2GRWD1
chr204452365044523690+3'-UTR,CDS3.230909.56700HepG2SND1
chr204452664644526678+3'-UTR,CDS4.2886722.02877HepG2LIN28B
chr204452664244526646+3'-UTR,CDS,intron-Proximal4.1375814.72718HepG2LIN28B
chr204452328844523373+3'-UTR,CDS,intron-Proximal3.409843.12941K562UCHL5
chr204452714944527216+3'-UTR3.016785.66031HepG2LSM11
chr204452725644527320+3'-UTR3.282203.65697HepG2PABPN1
chr204452567044525723+3'-UTR,CDS,intron-Proximal4.6363228.69508HepG2PRPF8
chr204452329244523377+3'-UTR,CDS3.029955.92720K562ZNF622
chr204452734344527377+3'-UTR3.365593.03634HepG2PABPN1
chr204452330844523335+3'-UTR,CDS3.059076.81934HepG2GRWD1
chr204452266644522711+5'-UTR,CDS3.033766.79825HepG2GRWD1
chr204451972844519820+5'-UTR4.978216.32136HepG2RBM15
chr204452037844520444+5'-UTR,CDS,intron-Proximal3.5002214.28674HepG2PRPF8
chr204451998044520017+5'-UTR,CDS3.382887.49943HepG2DDX3X
chr204452020744520373+CDS,intron-Proximal3.3382543.24995HepG2RPS3
chr204452065744520663+CDS,intron-Distal3.247106.27819HepG2PPIG
chr204452035744520397+CDS3.220966.18332HepG2GRWD1
chr204452065144520704+CDS,intron-Distal,intron-Proximal6.2065316.41790HepG2PRPF8
chr204452056144520644+CDS,intron-Distal3.6790419.47569HepG2RPS3
chr204452056744520653+CDS,intron-Distal3.1898718.22640HepG2SND1
chr204452051144520567+CDS,intron-Distal,intron-Proximal4.3264817.76935HepG2SF3B4
chr204452050344520511+intron-Distal,intron-Proximal6.0306518.02061HepG2SF3B4
chr204452086044520910+intron-Distal,intron-Proximal5.841369.44792K562SF3B4
chr204452582344525867+intron-Distal3.795857.53528HepG2EFTUD2
chr204452486144524943+intron-Distal3.239674.32790HepG2HNRNPK
chr204452050144520551+intron-Distal,intron-Proximal5.0424111.02762K562SF3B4
chr204452085844520888+intron-Distal,intron-Proximal4.620713.82050HepG2SF3B4
chr204452045244520540+intron-Distal,intron-Proximal3.248825.40117HepG2PRPF4
chr204452454544524616+intron-Distal4.340307.46127HepG2ILF3
chr204452510144525117+intron-Distal4.393904.94901HepG2HNRNPC
chr204452046344520503+intron-Distal,intron-Proximal5.370989.15758HepG2SF3B4
chr204452046744520538+intron-Distal,intron-Proximal3.2912512.73424HepG2BUD13
chr204452045944520548+intron-Distal,intron-Proximal4.3904719.16147HepG2EFTUD2
chr204452047844520521+intron-Distal,intron-Proximal3.130629.68144HepG2PPIG
chr204452442044524471+intron-Distal3.729228.55193HepG2ILF3
chr204452511744525135+intron-Distal4.347344.95101HepG2HNRNPC
chr204452508744525101+intron-Distal4.284584.95101HepG2HNRNPC
chr204452447144524528+intron-Distal3.451296.21552HepG2ILF3
chr204452599544526023+intron-Distal4.967837.21143HepG2EFTUD2
chr204452646844526541+intron-Proximal4.853126.10370HepG2PRPF4
chr204452647344526535+intron-Proximal4.945885.98493HepG2CDC40
chr204452257144522615+intron-Proximal4.889204.90235K562SF3B4
chr204452550944525581+intron-Proximal4.870326.57024HepG2AQR
chr204452099444521023+intron-Proximal5.137955.40008K562SF3B4
chr204452646344526543+intron-Proximal3.417788.12994HepG2LSM11
chr204452691744526972+intron-Proximal4.218414.41148HepG2GTF2F1
chr204452691144526974+intron-Proximal4.502024.79286HepG2PRPF4
chr204452377344523871+intron-Proximal4.808435.33214K562PRPF8
chr204452097944521009+intron-Proximal3.713235.58951HepG2SF3B4
chr204452098844521028+intron-Proximal4.958408.42614HepG2EFTUD2
chr204452112344521166+intron-Proximal4.342335.47926K562AQR
chr204452646844526552+intron-Proximal5.1353251.02241HepG2EFTUD2
chr204452378444523857+intron-Proximal3.3554317.61101HepG2PRPF8
chr204452096444521002+intron-Proximal4.9830214.24265HepG2PRPF8
chr204452182444521854+intron-Proximal4.700666.67793HepG2EFTUD2
chr204452648044526550+intron-Proximal3.476408.43738HepG2SF3B4
chr204452181844521858+intron-Proximal3.993538.70492HepG2SF3A3
chr204452112344521163+intron-Proximal3.8821012.22234HepG2PRPF8
chr204452644744526537+intron-Proximal4.040983.64168HepG2RBM5
chr204452379544523860+intron-Proximal4.180533.56076K562BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTSA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTSA is not available on ENCORE database.

  • 156 RBPs can affect the levels of CTSA.  








The Knockdown/knockout RNA-Seq assay for CTSA is not available on ENCORE database.





156 RBPs can affect the gene expression of CTSA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTSAENSG00000064601.124144.606203085.451100.425705.189203.76010HepG2AATF
CTSAENSG00000064601.128702.196705793.090900.586907.298705.86720HepG2ABCF1
CTSAENSG00000064601.126331.922904289.151900.5619021.0914019.76270HepG2ACO1
CTSAENSG00000064601.127559.198404276.075800.821809.081208.18000HepG2AKAP1
CTSAENSG00000064601.126841.772403879.524100.8184011.545209.59240HepG2AKAP8
CTSAENSG00000064601.126357.447804309.165600.5609017.4465015.74700HepG2AKAP8L
CTSAENSG00000064601.124971.215203537.928100.490605.159504.10350HepG2ASCC1
CTSAENSG00000064601.126392.720805227.130200.290302.879301.44550HepG2ATP5C1
CTSAENSG00000064601.124533.630305856.90000-0.369507.801806.74330HepG2AUH
CTSAENSG00000064601.125829.893804013.205000.538605.215504.01670HepG2BCLAF1
CTSAENSG00000064601.1215635.771105188.591901.5913064.3058062.24530HepG2BOP1
CTSAENSG00000064601.127258.649104339.994500.7419013.0533010.60450HepG2BUD13
CTSAENSG00000064601.124997.790704311.781100.212902.202101.50910HepG2CALR
CTSAENSG00000064601.127530.899603361.328801.1637027.4228025.34790HepG2CIRBP
CTSAENSG00000064601.124904.624104288.053800.193703.322102.60490HepG2CKAP4
CTSAENSG00000064601.124597.877702483.538200.888508.130506.83390HepG2CNOT7
CTSAENSG00000064601.127504.359804763.498000.6556010.744909.48130HepG2CPSF6
CTSAENSG00000064601.126685.816404770.335600.486907.479905.75600HepG2CPSF7
CTSAENSG00000064601.123683.660104568.38810-0.310504.428403.14120HepG2YBX3
CTSAENSG00000064601.123570.503602852.567600.323802.495301.46960HepG2CSTF2
CTSAENSG00000064601.122325.149603159.61170-0.442402.934701.52270HepG2CSTF2T
CTSAENSG00000064601.1210704.107105954.455400.8460037.4348035.61870HepG2CELF1
CTSAENSG00000064601.123430.343903966.77480-0.209603.271502.37160HepG2DDX19B
CTSAENSG00000064601.127993.577904574.725200.8051029.1525026.21210HepG2DDX1
CTSAENSG00000064601.121877.822303439.76200-0.8732014.6740012.04230HepG2DDX28
CTSAENSG00000064601.1210240.201204095.801701.3219032.4731030.58760HepG2DDX3X
CTSAENSG00000064601.124517.767203562.178800.342803.346701.92170HepG2DDX47
CTSAENSG00000064601.126408.716904541.761200.496704.049203.13310HepG2DDX55
CTSAENSG00000064601.129225.666605409.272800.770102.558501.61970HepG2DDX59
CTSAENSG00000064601.129018.425003519.215201.3575029.1790027.49170HepG2DDX6
CTSAENSG00000064601.125545.476804103.513200.4344010.790509.63410HepG2DKC1
CTSAENSG00000064601.123877.130804446.22790-0.197603.363202.65700HepG2DNAJC2
CTSAENSG00000064601.126861.782003866.206500.8276015.2446013.35800HepG2EEF2
CTSAENSG00000064601.124318.443703222.808700.422104.234802.86090HepG2EFTUD2
CTSAENSG00000064601.1211388.585303382.276401.7514056.3768054.04320HepG2EIF2S1
CTSAENSG00000064601.125941.825004394.251000.435206.409704.69800HepG2EIF2S2
CTSAENSG00000064601.124651.495903138.345600.567606.565505.21940HepG2EIF3D
CTSAENSG00000064601.129995.673603737.411301.4192031.5617029.44630HepG2EIF4A3
CTSAENSG00000064601.125543.603403639.661200.606905.101704.18680HepG2EIF4B
CTSAENSG00000064601.124173.292706316.39140-0.5979019.4413017.65000HepG2EIF4G1
CTSAENSG00000064601.123655.606705018.02440-0.457005.669604.15890HepG2ESF1
CTSAENSG00000064601.125970.113206724.45900-0.171702.306601.74890HepG2ETF1
CTSAENSG00000064601.125918.048504191.120500.497707.852406.45200HepG2EWSR1
CTSAENSG00000064601.124033.639302805.203200.523909.289107.12430HepG2FAM120A
CTSAENSG00000064601.129322.307405849.546100.672308.699607.42560HepG2FIP1L1
CTSAENSG00000064601.129498.361505989.828200.665108.307205.57190HepG2FMR1
CTSAENSG00000064601.124268.572302963.076700.526603.613202.72120HepG2FUBP3
CTSAENSG00000064601.125781.177103879.248900.575504.489603.09020HepG2FUS
CTSAENSG00000064601.127648.407903772.107101.0197020.4998018.80000HepG2FXR1
CTSAENSG00000064601.125325.548503498.542900.606106.832505.80610HepG2G3BP1
CTSAENSG00000064601.124709.300103714.987400.342102.865901.95560HepG2G3BP2
CTSAENSG00000064601.123988.306402794.246200.513206.182704.84440HepG2GEMIN5
CTSAENSG00000064601.125670.713203470.343700.708409.174907.28540HepG2GNB2L1
CTSAENSG00000064601.127333.493905400.036900.441404.194803.41790HepG2GPKOW
CTSAENSG00000064601.123947.463702299.288700.779605.606704.01290HepG2GRSF1
CTSAENSG00000064601.124594.615603221.856700.512004.159301.85360HepG2GRWD1
CTSAENSG00000064601.125161.770504094.811600.334006.460405.04650HepG2HDGF
CTSAENSG00000064601.125828.237704528.738100.363904.180003.40800HepG2HNRNPA1
CTSAENSG00000064601.127533.209805883.840300.356408.118406.67200HepG2HNRNPA2B1
CTSAENSG00000064601.123152.003802051.945600.619205.613803.56250HepG2HNRNPAB
CTSAENSG00000064601.128218.035205037.409100.7060014.1285012.67950HepG2HNRNPC
CTSAENSG00000064601.127075.120508578.85070-0.278005.225404.27860HepG2HNRNPF
CTSAENSG00000064601.126968.170105831.516000.256806.756705.74880HepG2HNRNPL
CTSAENSG00000064601.127436.165405153.332900.529004.296703.52740HepG2HNRNPLL
CTSAENSG00000064601.125397.766904035.699100.419405.775004.46300HepG2HNRNPM
CTSAENSG00000064601.1211196.719503555.964901.6547037.1865035.03940HepG2IGF2BP2
CTSAENSG00000064601.126658.270703338.035900.996002.583601.63460HepG2IGF2BP3
CTSAENSG00000064601.127471.951805111.521200.5476016.4772014.86340HepG2ILF2
CTSAENSG00000064601.125466.533603577.118500.611705.520804.05590HepG2KHSRP
CTSAENSG00000064601.124501.172203920.719500.199103.450202.31050HepG2KIF1C
CTSAENSG00000064601.1210742.441307960.795100.432203.249002.34640HepG2LARP4
CTSAENSG00000064601.124781.984103400.926700.491604.398202.96040HepG2LARP7
CTSAENSG00000064601.122278.711103410.67780-0.581804.119102.06150HepG2LSM11
CTSAENSG00000064601.128386.654603773.429401.1521024.8050022.97030HepG2MAGOH
CTSAENSG00000064601.127222.743903794.351100.9286014.6225013.25510HepG2MATR3
CTSAENSG00000064601.125866.105103284.453900.836604.069402.80430HepG2METAP2
CTSAENSG00000064601.125886.134304733.864400.314203.427902.52900HepG2MSI2
CTSAENSG00000064601.1210335.839403883.568601.4121035.1358033.08900HepG2NCBP2
CTSAENSG00000064601.125835.261404002.617700.543804.061902.33780HepG2NKRF
CTSAENSG00000064601.127773.354006348.187500.292104.200003.26090HepG2NOL12
CTSAENSG00000064601.127055.344504171.653100.758004.606003.17370HepG2NONO
CTSAENSG00000064601.123312.973604569.24030-0.463804.409103.46930HepG2NSUN2
CTSAENSG00000064601.124692.519803542.472500.405504.378202.36710HepG2NUP35
CTSAENSG00000064601.123306.654502270.382300.542302.985402.06220HepG2PABPC1
CTSAENSG00000064601.128560.688403457.832501.3078030.9434028.59660HepG2PABPC4
CTSAENSG00000064601.126177.210704953.173500.318506.242905.04890HepG2PARN
CTSAENSG00000064601.125444.179803469.275600.6500011.9492010.82950HepG2PCBP1
CTSAENSG00000064601.125701.882203671.955400.634804.966503.60650HepG2PCBP2
CTSAENSG00000064601.125948.761803530.133600.7528021.9218020.66410HepG2PTBP1
CTSAENSG00000064601.1210242.627106433.194500.6709043.1345041.36590HepG2PUM1
CTSAENSG00000064601.128454.606306428.383800.395206.769705.73730HepG2PUM2
CTSAENSG00000064601.125469.492403823.187900.5165010.791409.67580HepG2QKI
CTSAENSG00000064601.125264.128802404.809601.130203.909701.72530HepG2RBM17
CTSAENSG00000064601.127323.560405620.413000.381802.784102.26500HepG2RBM22
CTSAENSG00000064601.125719.191103469.801600.7209015.6143014.08100HepG2RBM25
CTSAENSG00000064601.125368.433304101.143100.388402.266501.37760HepG2RBM27
CTSAENSG00000064601.124081.547702111.987700.950403.108601.38950HepG2RBM39
CTSAENSG00000064601.125646.853903928.686500.523307.977407.14270HepG2NELFE
CTSAENSG00000064601.125626.102303481.624100.692305.606704.28520HepG2RPS10
CTSAENSG00000064601.125043.746903053.909400.7237015.3935014.10660HepG2RPS19
CTSAENSG00000064601.123433.516402495.161000.460503.154502.30120HepG2RPS3A
CTSAENSG00000064601.125352.323803860.966400.471102.879001.78030HepG2RPS5
CTSAENSG00000064601.124790.569003464.475100.467503.784202.88400HepG2RRP9
CTSAENSG00000064601.121930.268304456.36000-1.2071080.2148077.67150HepG2SAFB2
CTSAENSG00000064601.121235.614402369.55500-0.939408.371805.88970HepG2SBDS
CTSAENSG00000064601.126857.934103064.819201.1619028.9841026.30210HepG2SERBP1
CTSAENSG00000064601.1212624.527104949.785301.3507023.2153021.19630HepG2SF3A3
CTSAENSG00000064601.123288.835505100.92050-0.633207.655506.53290HepG2SF3B1
CTSAENSG00000064601.125260.925003675.296200.5174014.9046013.69720HepG2SF3B4
CTSAENSG00000064601.129115.679105196.843700.8106061.1410058.88710HepG2SMN1
CTSAENSG00000064601.125012.498103617.200100.470603.324802.26420HepG2SMNDC1
CTSAENSG00000064601.124656.275002076.157901.165204.610702.82460HepG2SNRNP200
CTSAENSG00000064601.125236.356706348.06650-0.277806.091705.42760HepG2SRFBP1
CTSAENSG00000064601.123417.639004325.38570-0.339803.094401.37660HepG2SRP68
CTSAENSG00000064601.127781.362103836.225101.0202065.8377064.22850HepG2SRSF1
CTSAENSG00000064601.1210465.041605983.635800.8064040.6656038.66010HepG2SRSF5
CTSAENSG00000064601.125377.577403120.983500.7849035.7901034.23130HepG2SRSF9
CTSAENSG00000064601.127636.723505511.654200.4704014.7996013.80320HepG2SSB
CTSAENSG00000064601.124803.877503949.571500.282402.714501.78140HepG2SUPT6H
CTSAENSG00000064601.1210220.839304520.903301.1767023.0603021.45000HepG2SUPV3L1
CTSAENSG00000064601.124211.341603448.181100.288302.989202.40980HepG2TAF15
CTSAENSG00000064601.1215844.896505022.265501.6575066.1280063.49130HepG2TARDBP
CTSAENSG00000064601.129361.386204133.947101.179108.695306.91970HepG2TBRG4
CTSAENSG00000064601.125165.908503029.989700.769609.402807.78660HepG2TFIP11
CTSAENSG00000064601.122573.972303168.37440-0.299703.204502.30930HepG2TIA1
CTSAENSG00000064601.126838.183604862.326000.491909.517308.68710HepG2TIAL1
CTSAENSG00000064601.126814.963004905.893700.4741013.8501012.72460HepG2TRIM56
CTSAENSG00000064601.123470.736502493.685000.476903.789601.96420HepG2TROVE2
CTSAENSG00000064601.127212.638105920.709400.284703.360502.38970HepG2TUFM
CTSAENSG00000064601.126026.231005003.692500.268202.035101.48710HepG2U2AF1
CTSAENSG00000064601.128075.893806267.170500.365702.621301.80640HepG2UBE2L3
CTSAENSG00000064601.124018.277102670.397600.589406.556705.37790HepG2UCHL5
CTSAENSG00000064601.127511.626104389.696400.7749038.7351036.75960HepG2UPF1
CTSAENSG00000064601.127020.902704138.840900.762305.196103.79610HepG2UPF2
CTSAENSG00000064601.126111.917804512.042100.4377010.209208.35030HepG2UTP18
CTSAENSG00000064601.125982.410704238.089200.497203.391402.73990HepG2UTP3
CTSAENSG00000064601.126188.732403896.816600.667205.806504.30200HepG2XRCC6
CTSAENSG00000064601.123628.019204450.34410-0.294702.745502.02280HepG2XRN2
CTSAENSG00000064601.129086.955604760.367700.9326067.4988065.12490HepG2ZC3H8
CTSAENSG00000064601.1210283.321904827.834801.0908057.6959056.03940HepG2ZNF622
CTSAENSG00000064601.121049.61590613.387000.7749014.2088013.02580K562AGGF1
CTSAENSG00000064601.121047.94770673.997600.636707.162205.39750K562AKAP8
CTSAENSG00000064601.121220.21260638.251500.934808.167306.98480K562AKAP8L
CTSAENSG00000064601.121641.16710944.979200.7963011.2157010.15100K562AQR
CTSAENSG00000064601.12852.30790669.669300.347802.964202.02010K562ATP5C1
CTSAENSG00000064601.121262.69260595.482601.0843016.8357014.66980K562BOP1
CTSAENSG00000064601.121237.39760733.048600.7552011.953309.52220K562CCDC124
CTSAENSG00000064601.121146.41500820.707900.482102.241901.30500K562CNOT7
CTSAENSG00000064601.121072.08210633.155100.7597010.742209.18290K562CPSF6
CTSAENSG00000064601.12834.00300484.597200.7832010.492608.32820K562DDX3X
CTSAENSG00000064601.12668.06010491.334300.443204.177102.47170K562DDX6
CTSAENSG00000064601.12730.05840532.360600.455504.104802.61270K562EIF2S1
CTSAENSG00000064601.121280.666101082.197900.242802.145001.49780K562EIF2S2
CTSAENSG00000064601.12741.12210506.311500.549604.970703.86710K562EIF4A3
CTSAENSG00000064601.12614.68090455.986700.430703.864602.46100K562EIF4B
CTSAENSG00000064601.121204.87850873.935300.463204.224503.15900K562FIP1L1
CTSAENSG00000064601.121236.56040644.247000.9405013.6825011.71880K562FMR1
CTSAENSG00000064601.12748.30210546.069100.454403.055502.08890K562FTO
CTSAENSG00000064601.12939.96090526.547300.8359014.7438013.45990K562FXR1
CTSAENSG00000064601.12194.82260355.23680-0.866603.995203.10670K562G3BP2
CTSAENSG00000064601.121148.45830604.496200.9258014.1673012.33580K562GPKOW
CTSAENSG00000064601.121200.38340805.476700.575506.679405.79220K562HNRNPC
CTSAENSG00000064601.121266.938301025.484000.304902.384701.41080K562HNRNPL
CTSAENSG00000064601.12826.24280506.924200.704705.773604.05980K562IGF2BP2
CTSAENSG00000064601.12964.73890516.193400.902108.117406.42070K562KRR1
CTSAENSG00000064601.12940.60330758.815400.309702.263301.45340K562MBNL1
CTSAENSG00000064601.12898.09860590.060400.605906.344104.98940K562METAP2
CTSAENSG00000064601.121821.172701434.570400.344103.139501.93340K562MSI2
CTSAENSG00000064601.121255.89840987.465700.346804.265503.27930K562MTPAP
CTSAENSG00000064601.12831.88210531.873000.645204.361503.17830K562NAA15
CTSAENSG00000064601.12718.77880505.545600.507604.772703.15370K562NCBP2
CTSAENSG00000064601.121396.192101097.152100.347605.498204.50050K562NSUN2
CTSAENSG00000064601.121264.02880788.465100.680804.186002.64060K562PABPC1
CTSAENSG00000064601.12871.64690424.839701.036705.531803.99730K562PABPN1
CTSAENSG00000064601.121231.44130999.168900.301402.542601.77760K562POLR2G
CTSAENSG00000064601.121979.235501561.635800.341804.290302.93980K562PUM1
CTSAENSG00000064601.121576.02540633.009101.3159011.5540010.49260K562PUS1
CTSAENSG00000064601.121017.98860616.739900.7229010.845209.69430K562RBM15
CTSAENSG00000064601.12753.01040495.953600.602405.668004.41160K562RBM22
CTSAENSG00000064601.12904.17340522.640500.790703.069301.42710K562RBM39
CTSAENSG00000064601.12910.66950658.919700.466704.468803.20540K562RCC2
CTSAENSG00000064601.121136.64660890.290700.352302.821101.72720K562SAFB
CTSAENSG00000064601.12916.91570388.403701.239106.490204.38550K562SF1
CTSAENSG00000064601.121940.354701082.625500.8417013.3217011.64400K562SF3A3
CTSAENSG00000064601.12787.91820574.937600.454502.827701.84340K562SF3B1
CTSAENSG00000064601.12544.04680369.011800.560003.063702.16300K562SF3B4
CTSAENSG00000064601.12925.82900473.327800.967804.545002.71130K562SFPQ
CTSAENSG00000064601.12829.60880446.249300.894502.939601.66050K562SNRNP200
CTSAENSG00000064601.12940.08980507.225900.8901013.2955011.74500K562SRSF1
CTSAENSG00000064601.12852.85740513.282100.732507.743006.48730K562TARDBP
CTSAENSG00000064601.121183.33320694.630800.768408.688106.95900K562TIAL1
CTSAENSG00000064601.121611.132101313.704600.294303.419101.99910K562TROVE2
CTSAENSG00000064601.121239.14460930.899700.412502.728001.53570K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTSA is not available on ENCORE database.





15 RBPs can affect the splicing of CTSA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECTSAENSG00000064601.12chr20+445218584452195044521363445215194452262644522711-0.177000.000020.00078excludedK562SF3B4
SECTSAENSG00000064601.12chr20+445218584452195044521312445215194452262644522711-0.060000.001070.01295excludedK562AQR
SECTSAENSG00000064601.12chr20+445218584452195044521363445215194452262644522711-0.078000.000850.03528excludedK562SF3B1
A5SSCTSAENSG00000064601.12chr20+4452136344521526445213634452151944521858445219500.058000.000140.01638longerHepG2U2AF1
RICTSAENSG00000064601.12chr20+445202074452066644520207445204014452055444520666-0.070000.000360.00587excludedHepG2SF3A3
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.168000.000270.00306includedHepG2U2AF2
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.100000.000000.00000includedHepG2UCHL5
RICTSAENSG00000064601.12chr20+4452091144521123445209114452096244521036445211230.144000.002250.02516includedK562RBM15
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.083000.000000.00000includedHepG2TIAL1
RICTSAENSG00000064601.12chr20+4452136344521868445213634452151944521678445218680.121000.003040.03072includedHepG2RBM22
RICTSAENSG00000064601.12chr20+4452091144521123445209114452096244521036445211230.143000.002250.02808includedK562UTP18
RICTSAENSG00000064601.12chr20+4452091144521123445209114452096244521036445211230.317000.000000.00000includedK562AQR
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.329000.000000.00000includedK562AQR
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.086000.000010.00220includedHepG2LARP4
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.188000.001120.04023includedK562TARDBP
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.088000.000000.00004includedHepG2XRN2
RICTSAENSG00000064601.12chr20+4452020744520666445202074452040144520554445206660.076000.000000.00000includedHepG2SSB
MXECTSAENSG00000064601.12chr20+4452560344525679445263554452644544523632445237724452664344526748-0.091000.000700.025702includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CTSA is not avaliable on ENCORE database.