C1QTNF3

General Information

Gene Name       : C1QTNF3
Gene ID             : ENSG00000082196.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C1QTNF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C1QTNF3ENSG00000082196.201.911.261.58ENCSR000AEF
HepG2C1QTNF3ENSG00000082196.201.994.013.00ENCSR985KAT
K562C1QTNF3ENSG00000082196.201.341.571.46ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C1QTNF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C1QTNF3 RNA is bound by 4 proteins.  







eCLIP assay for C1QTNF3 is not avaliable on ENCORE database.





4 proteins are bound to C1QTNF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr53402396934024051-CDS,intron-Distal,intron-Proximal4.720535.01842HepG2PRPF8
chr53403571734035789-CDS,intron-Distal,intron-Proximal4.840545.27173HepG2PRPF8
chr53402404734024115-CDS,intron-Distal,intron-Proximal4.205183.82843HepG2PPIG
chr53403343634033548-CDS,intron-Distal,intron-Proximal4.403394.16554HepG2PPIG
chr53402401334024110-CDS,intron-Distal,intron-Proximal3.583205.45876HepG2BCLAF1
chr53403228334032331-intron-Distal4.656045.54528HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C1QTNF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C1QTNF3 is not available on ENCORE database.

  • 46 RBPs can affect the levels of C1QTNF3.  








The Knockdown/knockout RNA-Seq assay for C1QTNF3 is not available on ENCORE database.





46 RBPs can affect the gene expression of C1QTNF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C1QTNF3ENSG00000082196.1674.31840119.80610-0.688901.968701.43930HepG2ACO1
C1QTNF3ENSG00000082196.1650.79750134.98990-1.410003.933903.31680HepG2AKAP1
C1QTNF3ENSG00000082196.16216.44970129.184400.744504.387703.55800HepG2AUH
C1QTNF3ENSG00000082196.16101.06070195.39490-0.951203.831602.92570HepG2CNOT7
C1QTNF3ENSG00000082196.16190.1261072.668601.387508.219507.08620HepG2CPSF6
C1QTNF3ENSG00000082196.1687.53200185.97620-1.087206.697505.78040HepG2CELF1
C1QTNF3ENSG00000082196.1664.44570129.27840-1.004302.690402.07210HepG2DDX3X
C1QTNF3ENSG00000082196.16170.48530106.755400.675202.342901.79470HepG2EIF2S1
C1QTNF3ENSG00000082196.16219.64530148.303200.566502.781002.17860HepG2ETF1
C1QTNF3ENSG00000082196.1632.53080140.03270-2.1059010.943209.55670HepG2FIP1L1
C1QTNF3ENSG00000082196.16175.5100082.302601.092405.222704.15320HepG2FUBP3
C1QTNF3ENSG00000082196.16191.32950111.955500.773003.156602.41130HepG2HNRNPK
C1QTNF3ENSG00000082196.16128.00060182.18150-0.509202.206101.59490HepG2HNRNPL
C1QTNF3ENSG00000082196.1636.60630119.79780-1.710404.486503.70040HepG2MATR3
C1QTNF3ENSG00000082196.16163.7783080.184401.030303.424402.33770HepG2MTPAP
C1QTNF3ENSG00000082196.16139.8129069.704701.004103.671902.81150HepG2NSUN2
C1QTNF3ENSG00000082196.16122.44790200.88480-0.714203.378601.60380HepG2NUP35
C1QTNF3ENSG00000082196.1685.27840178.56940-1.066204.338103.21220HepG2PABPC1
C1QTNF3ENSG00000082196.1675.16720116.44800-0.631502.039901.30360HepG2PARN
C1QTNF3ENSG00000082196.1690.34160189.29730-1.067205.928005.10000HepG2PUF60
C1QTNF3ENSG00000082196.16101.26980200.94100-0.988606.869006.02010HepG2PUM1
C1QTNF3ENSG00000082196.16142.57660200.79820-0.494001.990601.41600HepG2PUM2
C1QTNF3ENSG00000082196.16181.99620114.172500.672603.005702.35920HepG2QKI
C1QTNF3ENSG00000082196.1664.43080122.88700-0.931502.433501.76920HepG2RAVER1
C1QTNF3ENSG00000082196.16154.91520103.634500.579901.938801.36600HepG2RBM25
C1QTNF3ENSG00000082196.16177.36850109.323600.698003.261602.59950HepG2RECQL
C1QTNF3ENSG00000082196.1636.22790164.37450-2.181806.487504.06780HepG2SFPQ
C1QTNF3ENSG00000082196.16128.75500181.49340-0.495302.072601.44950HepG2SLBP
C1QTNF3ENSG00000082196.1670.60000122.17500-0.791203.028702.35950HepG2SMN1
C1QTNF3ENSG00000082196.16209.15270140.012300.578902.959702.44700HepG2SRFBP1
C1QTNF3ENSG00000082196.1696.11310186.89580-0.959405.587604.74360HepG2SRSF5
C1QTNF3ENSG00000082196.16129.7447085.834400.595902.060101.44970HepG2SRSF7
C1QTNF3ENSG00000082196.16252.81230121.575201.056108.900008.08130HepG2SSB
C1QTNF3ENSG00000082196.16134.99800212.55860-0.654903.582402.89210HepG2SUCLG1
C1QTNF3ENSG00000082196.16296.73070103.029001.5260016.6141015.40800HepG2TAF15
C1QTNF3ENSG00000082196.16128.1231076.636500.741302.357401.68120HepG2TARDBP
C1QTNF3ENSG00000082196.1677.57840115.34340-0.572201.800901.32630HepG2TRIM56
C1QTNF3ENSG00000082196.16148.0415074.799900.984803.735102.55420HepG2UPF2
C1QTNF3ENSG00000082196.16141.0234080.367700.811102.991502.23780HepG2XRN2
C1QTNF3ENSG00000082196.16146.42040101.605700.527001.895201.32520HepG2ZC3H8
C1QTNF3ENSG00000082196.165.4796033.50960-2.612402.005601.44730K562AKAP8L
C1QTNF3ENSG00000082196.1665.9950033.230100.989802.410801.73160K562EIF2S2
C1QTNF3ENSG00000082196.166.1262035.62110-2.539704.677603.55360K562FIP1L1
C1QTNF3ENSG00000082196.1611.7190040.91480-1.803802.665001.47540K562HNRNPA2B1
C1QTNF3ENSG00000082196.167.9547029.79380-1.905102.675001.93760K562PRPF8
C1QTNF3ENSG00000082196.166.8812030.73930-2.159403.850403.07870K562PTBP1
C1QTNF3ENSG00000082196.163.3496039.97970-3.577206.247303.96800K562SFPQ
C1QTNF3ENSG00000082196.165.3584030.13170-2.491403.820802.99690K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C1QTNF3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of C1QTNF3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for C1QTNF3 is not avaliable on ENCORE database.