CHN2

General Information

Gene Name       : CHN2
Gene ID             : ENSG00000106069.22
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CHN2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHN2ENSG00000106069.220.590.160.38ENCSR000AEF
HepG2CHN2ENSG00000106069.2219.5321.7720.65ENCSR985KAT
K562CHN2ENSG00000106069.220.150.100.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHN2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHN2 RNA is bound by 29 proteins.  







eCLIP assay for CHN2 is not avaliable on ENCORE database.





29 proteins are bound to CHN2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72951993929520001+3'-UTR,CDS,intron-Distal,intron-Proximal4.983026.23016HepG2PRPF8
chr72944037429440447+3'-UTR,CDS,intron-Distal,intron-Proximal4.083556.65960HepG2BCLAF1
chr72944031029440362+3'-UTR,CDS,intron-Distal3.580345.76104HepG2BCLAF1
chr72955381929553931+3'-UTR4.893533.83835HepG2FUBP3
chr72923446429234512+5'-UTR,intron-Distal3.216075.19749HepG2XRN2
chr72940758629407605+CDS,intron-Proximal3.668133.14999HepG2GRWD1
chr72918654329186634+CDS,intron-Distal,intron-Proximal3.927553.56019HepG2GRWD1
chr72954887829548955+CDS,intron-Proximal4.332273.59236HepG2AQR
chr72940754929407605+CDS,intron-Proximal3.792205.52342HepG2PPIG
chr72943799129438104+CDS,intron-Distal,intron-Proximal4.5375914.18756HepG2BCLAF1
chr72943329429433322+CDS,intron-Distal,intron-Proximal4.484024.04372HepG2BCLAF1
chr72918651829186631+CDS,intron-Distal,intron-Proximal4.840545.35117HepG2PRPF8
chr72943798829438102+CDS,intron-Distal,intron-Proximal4.054088.00190HepG2GRWD1
chr72939423629394285+CDS,intron-Proximal3.983074.04622HepG2GRWD1
chr72953555429535607+CDS,intron-Distal,intron-Proximal4.016614.79983HepG2U2AF2
chr72924372129243854+intron-Distal3.776867.65637HepG2SFPQ
chr72947907629479152+intron-Distal4.480875.84463HepG2SUGP2
chr72921761529217708+intron-Distal4.680895.84190HepG2HNRNPL
chr72931928429319390+intron-Distal3.140423.63033HepG2HNRNPU
chr72932252129322619+intron-Distal3.300624.26492HepG2BCLAF1
chr72933059529330697+intron-Distal5.3551310.55930HepG2RBFOX2
chr72929581629295880+intron-Distal4.430985.58061HepG2SUGP2
chr72928459429284646+intron-Distal4.465017.67287HepG2MATR3
chr72953211529532206+intron-Distal3.699633.30286HepG2PTBP1
chr72936031429360437+intron-Distal3.687937.54465HepG2RBFOX2
chr72938390929383964+intron-Distal4.208003.27829HepG2MATR3
chr72925244629252612+intron-Distal3.315869.03599HepG2GRWD1
chr72921721629217335+intron-Distal4.7911417.08089HepG2PTBP1
chr72944472629444821+intron-Distal3.767669.70976HepG2HNRNPL
chr72925006829250089+intron-Distal4.6707813.97732HepG2HNRNPL
chr72929802629298179+intron-Distal3.774095.12973HepG2MATR3
chr72928812429288177+intron-Distal3.920217.29258HepG2SUGP2
chr72938373329383802+intron-Distal3.327754.14346HepG2SUGP2
chr72934099429341063+intron-Distal3.170784.38902HepG2HNRNPL
chr72928042429280452+intron-Distal3.7401311.86973HepG2PTBP1
chr72925571329255769+intron-Distal3.419616.05394HepG2SUGP2
chr72952560129525704+intron-Distal4.814926.17200HepG2PCBP2
chr72924999729250092+intron-Distal3.077344.23985HepG2GTF2F1
chr72925668129256776+intron-Distal3.691583.94088HepG2QKI
chr72928045629280559+intron-Distal3.6863118.67323HepG2MATR3
chr72927854829278626+intron-Distal3.055703.47308HepG2TAF15
chr72929662129296696+intron-Distal3.111274.61989HepG2SUGP2
chr72922170229221785+intron-Distal4.075164.52298HepG2QKI
chr72945315029453261+intron-Distal3.444525.88747HepG2HNRNPL
chr72952667729526763+intron-Distal4.161363.74583HepG2PTBP1
chr72928548729285542+intron-Distal3.131123.54383HepG2HNRNPL
chr72945063729450714+intron-Distal3.339935.49850HepG2HNRNPL
chr72927916329279230+intron-Distal3.948077.66770HepG2HNRNPL
chr72933279829332917+intron-Distal4.0766512.33860HepG2HNRNPK
chr72934303929343123+intron-Distal4.946297.72290HepG2HNRNPK
chr72938952029389586+intron-Distal3.974753.16986HepG2QKI
chr72947943529479520+intron-Distal4.627684.24565HepG2HNRNPL
chr72928592429285986+intron-Distal3.808515.53636HepG2GTF2F1
chr72933230329332413+intron-Distal,intron-Proximal3.236056.25664HepG2SFPQ
chr72934187029341999+intron-Distal3.011997.92176HepG2MATR3
chr72925252429252602+intron-Distal4.689035.38543HepG2SRSF9
chr72930222029302323+intron-Distal3.955774.52298HepG2QKI
chr72927194029272087+intron-Distal3.6173110.65637HepG2MATR3
chr72952728429527407+intron-Distal4.2863014.39877HepG2PTBP1
chr72923388629233970+intron-Distal3.541054.84707HepG2HNRNPK
chr72930879329308854+intron-Distal3.711695.38389HepG2PCBP2
chr72930588329306016+intron-Distal3.596135.67571HepG2SFPQ
chr72938324829383368+intron-Distal3.811143.89405HepG2PTBP1
chr72932255629322649+intron-Distal4.065047.32646HepG2HLTF
chr72925187929251981+intron-Distal3.5123912.62435HepG2QKI
chr72941444629414504+intron-Distal3.152053.30286HepG2PTBP1
chr72934188129341953+intron-Distal5.9867530.91893HepG2PTBP1
chr72953234029532401+intron-Distal3.732315.54651HepG2SUGP2
chr72925611829256238+intron-Distal3.470733.33633HepG2MATR3
chr72923996429240022+intron-Distal6.6575921.51241HepG2PCBP2
chr72927163029271758+intron-Distal3.643373.68481HepG2HNRNPM
chr72926259829262645+intron-Distal4.794616.21976HepG2HLTF
chr72927988829279961+intron-Distal3.073326.43015HepG2HNRNPK
chr72947889229478950+intron-Distal4.058033.86809HepG2SUGP2
chr72946914629469232+intron-Distal3.146684.11174HepG2HNRNPL
chr72945591029456079+intron-Distal3.879764.52298HepG2QKI
chr72924407829244127+intron-Distal4.484863.77802HepG2U2AF2
chr72945195929452021+intron-Distal3.292016.65857HepG2HNRNPC
chr72953311329533225+intron-Distal5.262019.49897HepG2QKI
chr72930356229303837+intron-Distal5.4730314.25366HepG2SLTM
chr72940781129407860+intron-Distal4.332856.08171HepG2QKI
chr72927189529272083+intron-Distal3.106955.67280HepG2PTBP1
chr72934967329349770+intron-Distal3.124223.54232HepG2HNRNPL
chr72925466529254711+intron-Distal3.377395.36060HepG2SUGP2
chr72926248929262578+intron-Distal3.289776.94634HepG2HLTF
chr72921752229217609+intron-Distal3.606925.14763HepG2HNRNPK
chr72950850729508556+intron-Distal3.245033.35103HepG2QKI
chr72935184329351901+intron-Distal4.517958.88160HepG2PTBP1
chr72928432329284353+intron-Distal3.146473.35050HepG2SUGP2
chr72953361829533715+intron-Distal4.516544.78128HepG2SUGP2
chr72935190129351974+intron-Distal3.313024.54387HepG2PTBP1
chr72932372729323780+intron-Distal3.220465.25752HepG2HNRNPC
chr72927162329271732+intron-Distal3.1464710.97964HepG2SUGP2
chr72939585129395961+intron-Distal3.220203.77546HepG2HNRNPL
chr72930192229301992+intron-Distal3.334513.33412HepG2HNRNPL
chr72944482129444925+intron-Distal4.8762913.83086HepG2HNRNPL
chr72922030729220386+intron-Distal3.809685.75173HepG2QKI
chr72933499129335042+intron-Distal4.034213.71677HepG2HNRNPL
chr72933307629333208+intron-Distal3.138394.59863HepG2PTBP1
chr72934275329342811+intron-Distal4.780836.35155HepG2HNRNPK
chr72941236629412460+intron-Distal3.709847.70388HepG2QKI
chr72923992529240027+intron-Distal5.0179513.26087HepG2PTBP1
chr72942027829420383+intron-Distal,intron-Proximal4.537525.54528HepG2QKI
chr72934543229345457+intron-Distal3.864125.38800HepG2PCBP2
chr72931269429312797+intron-Distal4.784356.08961HepG2PTBP1
chr72940777229407811+intron-Distal5.148716.58335HepG2QKI
chr72952365929523755+intron-Distal,intron-Proximal3.633073.59803HepG2PTBP1
chr72945444129454549+intron-Distal3.939993.82414HepG2HNRNPK
chr72948384629483933+intron-Distal4.991726.93116HepG2QKI
chr72923991329239964+intron-Distal5.1995614.65053HepG2PCBP2
chr72927155629271601+intron-Distal4.322323.16986HepG2QKI
chr72928040529280424+intron-Distal4.8195410.89104HepG2PTBP1
chr72928695329287135+intron-Distal3.589177.45714HepG2HNRNPK
chr72952658629526653+intron-Distal3.919603.40087HepG2RBFOX2
chr72925101829251118+intron-Distal3.4004914.39418HepG2HNRNPL
chr72931854429318657+intron-Distal3.041055.49521HepG2HNRNPK
chr72953319629533256+intron-Distal3.207253.59523HepG2SUGP2
chr72938386529383921+intron-Distal4.007303.53723HepG2PTBP1
chr72934545729345544+intron-Distal5.6470719.79046HepG2PCBP2
chr72935278829352888+intron-Distal5.7804111.90922HepG2NKRF
chr72928542129285487+intron-Distal4.794016.36545HepG2HNRNPL
chr72928047529280564+intron-Distal4.1938851.97343HepG2PTBP1
chr72931374029313809+intron-Distal4.562505.11328HepG2SUGP2
chr72925656729256672+intron-Distal3.304367.84603HepG2QKI
chr72935291629353012+intron-Distal5.546448.40490HepG2NKRF
chr72930475729304842+intron-Distal3.735085.73132HepG2ILF3
chr72931341329313499+intron-Distal4.897576.63341HepG2SFPQ
chr72933081229330854+intron-Distal4.352734.77477HepG2RBFOX2
chr72928459129284637+intron-Distal3.250465.35016HepG2SUGP2
chr72924009029240184+intron-Distal5.539499.85976HepG2PTBP1
chr72950917929509263+intron-Distal3.352733.73413HepG2RBFOX2
chr72928464429284782+intron-Distal5.233887.11021HepG2PTBP1
chr72925506229255104+intron-Distal3.728785.79523HepG2SUGP2
chr72933412029334201+intron-Distal4.800836.06709HepG2SFPQ
chr72924869029248751+intron-Distal3.063833.19398HepG2XPO5
chr72932430929324404+intron-Distal3.128883.30791HepG2SRSF9
chr72928830929288371+intron-Distal4.4948611.37442HepG2SUGP2
chr72952729029527353+intron-Distal4.539214.17937HepG2PCBP2
chr72946946529469575+intron-Distal4.607315.00384HepG2SFPQ
chr72928452629284594+intron-Distal4.005326.91197HepG2MATR3
chr72930786629307961+intron-Distal3.6337312.83313HepG2HNRNPL
chr72924009829240134+intron-Distal4.695195.76537HepG2PCBP2
chr72947043929470545+intron-Distal4.447194.87774HepG2HNRNPK
chr72925008929250132+intron-Distal4.8612112.49294HepG2HNRNPL
chr72934195329341999+intron-Distal7.0712033.77618HepG2PTBP1
chr72933327329333369+intron-Distal4.102766.88258HepG2RBFOX2
chr72925863729258691+intron-Distal3.209644.90436HepG2HLTF
chr72924535929245420+intron-Distal3.071814.51544HepG2HNRNPL
chr72927195529272051+intron-Distal3.8083613.05314HepG2SUGP2
chr72932601529326149+intron-Distal4.8250710.61789HepG2RBFOX2
chr72928567629285714+intron-Distal3.480874.35402HepG2SUGP2
chr72934541429345542+intron-Distal4.0670217.10331HepG2PTBP1
chr72931270029312787+intron-Distal3.924905.64899HepG2PCBP2
chr72934538729345432+intron-Distal4.632428.02555HepG2PCBP2
chr72925303029253093+intron-Distal3.702033.25346HepG2SAFB
chr72927226229272346+intron-Distal4.6411210.82526HepG2MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHN2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHN2 is not available on ENCORE database.

  • 87 RBPs can affect the levels of CHN2.  








The Knockdown/knockout RNA-Seq assay for CHN2 is not available on ENCORE database.





87 RBPs can affect the gene expression of CHN2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHN2ENSG00000106069.16537.69830698.99770-0.378503.659602.97850HepG2ACO1
CHN2ENSG00000106069.16926.085401593.38070-0.782908.048407.19210HepG2AKAP1
CHN2ENSG00000106069.161729.641701031.905900.7451018.3900016.91250HepG2AUH
CHN2ENSG00000106069.16351.65250563.04180-0.679104.535203.33410HepG2BCCIP
CHN2ENSG00000106069.16310.37630489.21790-0.656504.348703.24460HepG2BCLAF1
CHN2ENSG00000106069.16429.94040623.87700-0.537104.102403.38970HepG2BOP1
CHN2ENSG00000106069.161148.66870923.323100.315002.565201.82140HepG2CALR
CHN2ENSG00000106069.16714.019301166.18700-0.707805.754004.32410HepG2CCAR1
CHN2ENSG00000106069.16514.79180646.45160-0.328602.928702.07350HepG2DDX19B
CHN2ENSG00000106069.16512.67060722.67310-0.495304.000703.19900HepG2DDX21
CHN2ENSG00000106069.16585.648401526.36740-1.3820025.2327023.53580HepG2DDX3X
CHN2ENSG00000106069.16345.86620553.59820-0.678604.552103.58650HepG2DDX55
CHN2ENSG00000106069.161280.35890650.386900.977106.984905.47260HepG2DDX59
CHN2ENSG00000106069.16749.884201311.11230-0.806108.244907.23130HepG2DDX6
CHN2ENSG00000106069.16518.19500627.12430-0.275302.178801.58720HepG2DNAJC2
CHN2ENSG00000106069.16430.64570751.97510-0.804207.212705.79800HepG2EEF2
CHN2ENSG00000106069.16600.759601260.47240-1.0691015.1069013.79150HepG2EIF2S1
CHN2ENSG00000106069.16404.54650610.48210-0.593604.077902.99440HepG2EIF3D
CHN2ENSG00000106069.16733.746201393.00330-0.9248010.897609.65770HepG2EIF4A3
CHN2ENSG00000106069.161198.47460984.042800.284302.761001.92500HepG2EIF4G1
CHN2ENSG00000106069.161345.11820942.656100.512804.891703.82700HepG2EIF4G2
CHN2ENSG00000106069.16914.824301184.68060-0.372903.429702.77090HepG2ETF1
CHN2ENSG00000106069.16546.45790683.00500-0.321802.016201.30590HepG2EWSR1
CHN2ENSG00000106069.16597.96020958.69460-0.681005.898104.81560HepG2FIP1L1
CHN2ENSG00000106069.16671.57410830.29360-0.306102.025701.34420HepG2FUBP3
CHN2ENSG00000106069.16616.36200942.79870-0.613203.996402.66050HepG2FUS
CHN2ENSG00000106069.16654.743601405.38180-1.1020017.1163015.55950HepG2FXR1
CHN2ENSG00000106069.16831.683401303.75040-0.648606.107005.13550HepG2G3BP1
CHN2ENSG00000106069.16434.14080649.18210-0.580503.947503.19400HepG2GPKOW
CHN2ENSG00000106069.16632.65050909.96000-0.524402.944501.79780HepG2GRSF1
CHN2ENSG00000106069.16614.98840903.38650-0.554802.672501.33600HepG2HLTF
CHN2ENSG00000106069.16463.79310638.74970-0.461803.249102.55650HepG2HNRNPA1
CHN2ENSG00000106069.16727.66260545.871400.414603.895403.05850HepG2HNRNPF
CHN2ENSG00000106069.16707.155901320.04240-0.9005012.8165011.42320HepG2HNRNPK
CHN2ENSG00000106069.16404.10960661.43720-0.710907.379805.94130HepG2HNRNPM
CHN2ENSG00000106069.16767.81750537.524900.514304.682103.76280HepG2IGF2BP1
CHN2ENSG00000106069.16801.692901325.25250-0.725107.771706.69880HepG2IGF2BP2
CHN2ENSG00000106069.16597.07170720.95070-0.272002.295801.62030HepG2ILF2
CHN2ENSG00000106069.16605.43330936.70690-0.629604.727403.11270HepG2KHDRBS1
CHN2ENSG00000106069.16862.748301231.21670-0.513103.461302.53170HepG2LARP4
CHN2ENSG00000106069.16482.52830665.62330-0.464103.007101.82320HepG2LARP7
CHN2ENSG00000106069.16484.82370699.11360-0.528103.336702.00190HepG2LIN28B
CHN2ENSG00000106069.16532.567601405.87200-1.4004025.1860023.33890HepG2MAGOH
CHN2ENSG00000106069.161123.881201413.75680-0.331001.911301.38220HepG2MATR3
CHN2ENSG00000106069.16580.64040775.87160-0.418203.223402.35280HepG2MSI2
CHN2ENSG00000106069.16693.654201447.07190-1.0608015.1340013.73390HepG2NCBP2
CHN2ENSG00000106069.16747.084701001.49400-0.422803.494001.68090HepG2NUP35
CHN2ENSG00000106069.161000.170101288.77270-0.365802.424101.74490HepG2PABPC4
CHN2ENSG00000106069.16526.01520698.61220-0.409403.814602.83870HepG2PARN
CHN2ENSG00000106069.16539.880901264.19270-1.2275031.0108029.35560HepG2PCBP1
CHN2ENSG00000106069.161017.39900801.413900.344203.612802.74030HepG2PRPF4
CHN2ENSG00000106069.16891.701901286.29880-0.528608.591807.73840HepG2PTBP1
CHN2ENSG00000106069.16697.27360944.17000-0.437303.782903.09820HepG2PUF60
CHN2ENSG00000106069.16563.045601002.26540-0.8319019.0696017.79520HepG2PUM1
CHN2ENSG00000106069.16581.72030861.35390-0.566302.621901.93470HepG2RAVER1
CHN2ENSG00000106069.16665.90060990.19160-0.572405.674004.99920HepG2RBM22
CHN2ENSG00000106069.16608.58770802.60690-0.399202.181701.31090HepG2RBM27
CHN2ENSG00000106069.16571.479301431.58070-1.3248026.4664025.14200HepG2NELFE
CHN2ENSG00000106069.16772.961501333.22560-0.7865017.4698016.13820HepG2RECQL
CHN2ENSG00000106069.16836.46380588.075300.508203.992803.19720HepG2RPLP0
CHN2ENSG00000106069.161140.72910846.010700.431102.153701.31870HepG2RPS10
CHN2ENSG00000106069.16329.74100593.98350-0.849107.997907.01580HepG2RPS19
CHN2ENSG00000106069.16461.55040740.26310-0.681605.141804.07210HepG2RPS2
CHN2ENSG00000106069.16669.02580987.12320-0.561203.629002.71330HepG2RPS3A
CHN2ENSG00000106069.16427.44350628.54220-0.556306.359305.44270HepG2SAFB2
CHN2ENSG00000106069.16817.63140613.181800.415002.841202.12610HepG2SF3B1
CHN2ENSG00000106069.16679.914401339.31890-0.9781023.0908021.66410HepG2SF3B4
CHN2ENSG00000106069.16533.78160732.97880-0.457505.448404.59720HepG2SMN1
CHN2ENSG00000106069.16560.08210877.95680-0.648504.553903.30120HepG2SMNDC1
CHN2ENSG00000106069.161423.288001118.416500.347704.870304.25920HepG2SRFBP1
CHN2ENSG00000106069.16693.533001397.91170-1.0112023.6507022.56400HepG2SRSF1
CHN2ENSG00000106069.16931.60450659.876500.497403.044601.98660HepG2SRSF3
CHN2ENSG00000106069.16726.52440536.309400.437804.286003.44800HepG2SRSF7
CHN2ENSG00000106069.161373.36850971.105300.499908.848908.03220HepG2SSB
CHN2ENSG00000106069.16643.266001060.19840-0.7208014.3945013.15670HepG2SUCLG1
CHN2ENSG00000106069.16470.92400647.32810-0.459003.576002.51570HepG2SUPT6H
CHN2ENSG00000106069.16309.17620551.08140-0.833806.311705.35100HepG2SUPV3L1
CHN2ENSG00000106069.16955.827701154.56870-0.272502.128601.39340HepG2TIA1
CHN2ENSG00000106069.16446.12230685.78850-0.620306.484805.77920HepG2TIAL1
CHN2ENSG00000106069.16638.91950820.08200-0.360102.162501.60070HepG2U2AF1
CHN2ENSG00000106069.16555.59720325.529000.771206.476705.30850HepG2UCHL5
CHN2ENSG00000106069.16687.78070937.69840-0.447205.098303.71900HepG2UTP18
CHN2ENSG00000106069.16684.30080880.77800-0.364103.429002.77500HepG2UTP3
CHN2ENSG00000106069.16648.38160884.17250-0.447502.365701.36070HepG2XPO5
CHN2ENSG00000106069.16580.33510947.20760-0.706805.098503.68860HepG2XRCC6
CHN2ENSG00000106069.161106.47270790.883100.484307.613606.58900HepG2ZC3H8
CHN2ENSG00000106069.161450.169201003.342200.5313011.3487010.42650HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHN2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CHN2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CHN2 is not avaliable on ENCORE database.