CHRD

General Information

Gene Name       : CHRD
Gene ID             : ENSG00000090539.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CHRD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CHRDENSG00000090539.150.000.000.00ENCSR000AEF
HepG2CHRDENSG00000090539.1527.529.9118.71ENCSR985KAT
K562CHRDENSG00000090539.150.080.100.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CHRD is not avaliable on ENCORE database.



Proteins bound to RNA
  • CHRD RNA is bound by 30 proteins.  







eCLIP assay for CHRD is not avaliable on ENCORE database.





30 proteins are bound to CHRD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3184099283184099310+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.439829.98881HepG2PABPN1
chr3184106717184106746+3'-UTR,CDS,intron-Distal3.892388.12130HepG2PPIG
chr3184104367184104444+3'-UTR,CDS,intron-Distal4.3753417.08962HepG2PPIG
chr3184104642184104725+3'-UTR,CDS,intron-Distal4.3048419.17454HepG2PPIG
chr3184107168184107269+3'-UTR,CDS,intron-Distal3.131254.18675HepG2ZC3H11A
chr3184104836184104896+3'-UTR,CDS,intron-Distal,intron-Proximal4.2448318.22249HepG2PPIG
chr3184103006184103027+3'-UTR,CDS,intron-Distal,intron-Proximal4.1507814.94352HepG2PPIG
chr3184107154184107170+3'-UTR,CDS,intron-Distal,intron-Proximal3.496064.00333HepG2EIF3H
chr3184104813184104897+3'-UTR,CDS,intron-Distal,intron-Proximal5.2377425.18797HepG2PRPF8
chr3184105808184105822+3'-UTR,CDS,intron-Distal,intron-Proximal3.6543610.81930HepG2PPIG
chr3184104511184104543+3'-UTR,CDS,intron-Distal,intron-Proximal6.0268714.19662HepG2PABPN1
chr3184104278184104290+3'-UTR,CDS,intron-Distal,intron-Proximal3.198864.61799HepG2BCLAF1
chr3184105718184105744+3'-UTR,CDS,intron-Distal,intron-Proximal3.061556.06438HepG2BCLAF1
chr3184098845184098914+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.1899913.05543HepG2U2AF2
chr3184106377184106417+3'-UTR,CDS,intron-Distal4.281399.39582HepG2BCLAF1
chr3184106374184106502+3'-UTR,CDS,intron-Distal,intron-Proximal3.842459.56867HepG2ZC3H11A
chr3184107319184107441+3'-UTR,intron-Distal3.217555.76291HepG2DDX59
chr3184106501184106530+3'-UTR,CDS,intron-Distal,intron-Proximal5.2555915.02880HepG2PPIG
chr3184105747184105824+3'-UTR,CDS,intron-Distal,intron-Proximal3.113524.02671HepG2UCHL5
chr3184104302184104367+3'-UTR,CDS,intron-Distal4.0805710.86690HepG2PPIG
chr3184106680184106708+3'-UTR,CDS,intron-Distal,intron-Proximal3.5133410.03442HepG2PABPN1
chr3184105170184105214+3'-UTR,CDS,intron-Distal3.842958.67834HepG2LSM11
chr3184103833184103836+3'-UTR,CDS,intron-Distal,intron-Proximal4.2848711.91397HepG2PPIG
chr3184105760184105765+3'-UTR,CDS,intron-Distal3.444413.32156HepG2DDX59
chr3184106374184106389+3'-UTR,CDS,intron-Distal,intron-Proximal3.178864.87890HepG2LSM11
chr3184107294184107373+3'-UTR,intron-Distal3.369478.77086HepG2BCLAF1
chr3184105169184105221+3'-UTR,CDS,intron-Distal4.3661512.11762HepG2PPIG
chr3184104451184104511+3'-UTR,CDS,intron-Distal4.2392413.91386HepG2PABPN1
chr3184105718184105747+3'-UTR,CDS,intron-Distal,intron-Proximal5.5243521.62816HepG2PABPN1
chr3184105718184105760+3'-UTR,CDS,intron-Distal,intron-Proximal3.234254.75790HepG2HLTF
chr3184100156184100223+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.6537419.57787HepG2U2AF2
chr3184106480184106530+3'-UTR,CDS,intron-Distal,intron-Proximal3.8307113.34526HepG2PABPN1
chr3184107180184107272+3'-UTR,CDS,intron-Distal3.7182815.05744HepG2LSM11
chr3184106418184106480+3'-UTR,CDS,intron-Distal4.5021513.98985HepG2PABPN1
chr3184106389184106425+3'-UTR,CDS,intron-Distal3.271758.03766HepG2LSM11
chr3184107201184107285+3'-UTR,CDS,intron-Distal3.190354.41677HepG2EIF3H
chr3184106679184106717+3'-UTR,CDS,intron-Distal,intron-Proximal5.3599515.94237HepG2PPIG
chr3184104864184104895+3'-UTR,CDS,intron-Distal3.996714.86518HepG2BUD13
chr3184105800184105864+3'-UTR,CDS,intron-Distal,intron-Proximal3.7188411.43407HepG2PRPF8
chr3184105718184105742+3'-UTR,CDS,intron-Distal,intron-Proximal4.5780518.48398HepG2PPIG
chr3184106718184106748+3'-UTR,CDS,intron-Distal3.4941813.51038HepG2LSM11
chr3184103007184103026+3'-UTR,CDS,intron-Distal3.224555.26569HepG2BUD13
chr3184105169184105219+3'-UTR,CDS,intron-Distal5.8628315.85721HepG2PABPN1
chr3184104292184104359+3'-UTR,CDS,intron-Distal3.754308.55051HepG2HLTF
chr3184106497184106530+3'-UTR,CDS,intron-Distal,intron-Proximal5.572788.22235HepG2EIF3H
chr3184100243184100316+3'-UTR,5'-UTR,CDS,intron-Distal3.4223411.86841HepG2PABPN1
chr3184103890184103948+3'-UTR,CDS,intron-Distal,intron-Proximal3.1235510.73945HepG2BCLAF1
chr3184106425184106489+3'-UTR,CDS,intron-Distal3.208448.52689HepG2LSM11
chr3184103868184103888+3'-UTR,CDS,intron-Distal3.359687.72558HepG2LSM11
chr3184099369184099406+3'-UTR,5'-UTR,CDS,intron-Distal3.683188.62339HepG2GRWD1
chr3184099523184099558+3'-UTR,5'-UTR,CDS,intron-Distal3.380285.64190HepG2PABPN1
chr3184105801184105822+3'-UTR,CDS,intron-Distal,intron-Proximal3.194384.13483HepG2PRPF4
chr3184104632184104639+3'-UTR,CDS,intron-Distal,intron-Proximal5.594029.73587HepG2PABPN1
chr3184106683184106710+3'-UTR,CDS,intron-Distal3.2425812.82489HepG2LSM11
chr3184104639184104697+3'-UTR,CDS,intron-Distal4.4241817.01863HepG2PABPN1
chr3184106420184106472+3'-UTR,CDS,intron-Distal4.532833.24150HepG2HLTF
chr3184100114184100206+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5884419.59913HepG2SF3A3
chr3184100445184100469+3'-UTR,5'-UTR,CDS,intron-Distal4.249689.56105HepG2PPIG
chr3184099283184099290+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8137312.71368HepG2PPIG
chr3184107182184107240+3'-UTR,CDS,intron-Distal5.0046914.40770HepG2PABPN1
chr3184103886184103945+3'-UTR,CDS,intron-Distal3.999203.48445HepG2NOL12
chr3184104366184104453+3'-UTR,CDS,intron-Distal3.0140412.36712HepG2LSM11
chr3184105805184105822+3'-UTR,CDS,intron-Distal,intron-Proximal4.6268515.34947HepG2PABPN1
chr3184106711184106781+3'-UTR,CDS,intron-Distal5.2268122.63963HepG2PABPN1
chr3184105169184105232+3'-UTR,CDS,intron-Distal4.130084.45558HepG2GRWD1
chr3184107272184107340+3'-UTR,intron-Distal4.5999024.01048HepG2LSM11
chr3184106756184106782+3'-UTR,CDS,intron-Distal4.2011311.83519HepG2PPIG
chr3184107273184107403+3'-UTR,intron-Distal3.9841026.67258HepG2PABPN1
chr3184105812184105821+3'-UTR,CDS,intron-Distal3.728257.65586HepG2LSM11
chr3184106373184106418+3'-UTR,CDS,intron-Distal,intron-Proximal5.6593821.90362HepG2PABPN1
chr3184103833184103836+3'-UTR,CDS,intron-Distal,intron-Proximal4.066347.38694HepG2SRSF9
chr3184105738184105818+3'-UTR,CDS,intron-Distal3.742564.25541HepG2GRWD1
chr3184106680184106699+3'-UTR,CDS,intron-Distal,intron-Proximal5.334206.73606HepG2EIF3H
chr3184102804184102836+3'-UTR,CDS,intron-Distal,intron-Proximal3.301736.78262HepG2LSM11
chr3184103836184103853+3'-UTR,CDS,intron-Distal3.223946.70718HepG2SRSF9
chr3184103898184103933+3'-UTR,CDS,intron-Distal4.7004122.18170HepG2PABPN1
chr3184099523184099551+3'-UTR,5'-UTR,CDS,intron-Distal4.246293.97409HepG2LSM11
chr3184099506184099515+3'-UTR,5'-UTR,CDS,intron-Distal5.2172212.59749HepG2PPIG
chr3184106493184106530+3'-UTR,CDS,intron-Distal,intron-Proximal3.354736.33024HepG2BCLAF1
chr3184103919184103945+3'-UTR,CDS,intron-Distal4.151153.28046HepG2ZC3H11A
chr3184100447184100481+3'-UTR,5'-UTR,CDS,intron-Distal3.744235.55663HepG2LSM11
chr3184100525184100537+3'-UTR,5'-UTR,CDS,intron-Distal3.444504.00411HepG2LSM11
chr3184104283184104284+3'-UTR,CDS,intron-Distal3.550994.00411HepG2LSM11
chr3184105716184105747+3'-UTR,CDS,intron-Distal,intron-Proximal4.277657.57443HepG2BUD13
chr3184099754184099805+3'-UTR,5'-UTR,CDS,intron-Distal5.0624217.18911HepG2PABPN1
chr3184100120184100178+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.7603120.44641HepG2SF3B4
chr3184106711184106782+3'-UTR,CDS,intron-Distal3.415959.70770HepG2EIF3H
chr3184105171184105220+3'-UTR,CDS,intron-Distal4.442357.53358HepG2BCLAF1
chr3184099732184099813+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5206110.18571HepG2GRWD1
chr3184104846184104892+3'-UTR,CDS,intron-Distal4.3816514.53405HepG2PABPN1
chr3184105241184105265+3'-UTR,CDS,intron-Distal3.413635.15500HepG2BCLAF1
chr3184099698184099727+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.521563.84691HepG2SF3B4
chr3184104316184104370+3'-UTR,CDS,intron-Distal3.396603.13224HepG2ZC3H11A
chr3184102873184102993+3'-UTR,CDS,intron-Distal3.5661513.10809HepG2EIF3H
chr3184099355184099412+3'-UTR,5'-UTR,CDS,intron-Distal3.022274.82058HepG2SRSF9
chr3184103832184103878+3'-UTR,CDS,intron-Distal,intron-Proximal3.071296.53290HepG2BUD13
chr3184103833184103840+3'-UTR,CDS,intron-Distal,intron-Proximal3.958679.74915HepG2PABPN1
chr3184103841184103884+3'-UTR,CDS,intron-Distal4.3039118.07905HepG2PPIG
chr3184107508184107575+3'-UTR,intron-Distal3.122278.20578HepG2LSM11
chr3184103840184103862+3'-UTR,CDS,intron-Distal4.1789814.70554HepG2PABPN1
chr3184102901184102991+3'-UTR,CDS,intron-Distal3.1938713.96297HepG2LSM11
chr3184100176184100206+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.026245.02602HepG2PABPN1
chr3184102914184103006+3'-UTR,CDS,intron-Distal4.5219119.12582HepG2PPIG
chr3184104304184104343+3'-UTR,CDS,intron-Distal5.159735.74423HepG2BUD13
chr3184103908184103947+3'-UTR,CDS,intron-Distal3.346248.80324HepG2LSM11
chr3184105744184105821+3'-UTR,CDS,intron-Distal3.4251612.32425HepG2BCLAF1
chr3184104401184104459+3'-UTR,CDS,intron-Distal3.129673.54960HepG2ZC3H11A
chr3184100161184100219+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.5125433.02329HepG2PPIG
chr3184107431184107460+3'-UTR,intron-Distal4.590124.97342HepG2PPIG
chr3184102804184102874+3'-UTR,CDS,intron-Distal,intron-Proximal4.7976116.43475HepG2PABPN1
chr3184099348184099409+3'-UTR,5'-UTR,CDS,intron-Distal4.1792830.42714HepG2PPIG
chr3184106742184106784+3'-UTR,CDS,intron-Distal,intron-Proximal3.615664.17167HepG2ZC3H11A
chr3184099351184099369+3'-UTR,5'-UTR,CDS,intron-Distal4.198329.83058HepG2GRWD1
chr3184099515184099542+3'-UTR,5'-UTR,CDS,intron-Distal4.5826312.68282HepG2PPIG
chr3184103005184103027+3'-UTR,CDS,intron-Distal,intron-Proximal4.355749.16753HepG2SRSF9
chr3184105716184105737+3'-UTR,CDS,intron-Distal,intron-Proximal4.371079.45279HepG2EIF3H
chr3184102805184102914+3'-UTR,CDS,intron-Distal,intron-Proximal4.0308019.24593HepG2PPIG
chr3184107501184107571+3'-UTR,intron-Distal5.268096.93450HepG2ZC3H11A
chr3184107179184107262+3'-UTR,CDS,intron-Distal3.525448.77723HepG2PPIG
chr3184104724184104770+3'-UTR,CDS,intron-Distal,intron-Proximal4.4477511.22922HepG2AQR
chr3184107275184107385+3'-UTR,intron-Distal4.325093.58932HepG2AGGF1
chr3184107340184107406+3'-UTR,intron-Distal4.4364518.33228HepG2LSM11
chr3184099290184099338+3'-UTR,5'-UTR,CDS,intron-Distal3.5916322.18667HepG2PPIG
chr3184106424184106483+3'-UTR,CDS,intron-Distal4.4118211.55000HepG2BCLAF1
chr3184106422184106501+3'-UTR,CDS,intron-Distal5.4875822.00757HepG2PPIG
chr3184107154184107169+3'-UTR,CDS,intron-Distal,intron-Proximal3.421949.95640HepG2LSM11
chr3184099763184099813+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.3375320.66452HepG2PPIG
chr3184099720184099754+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.190349.17083HepG2PABPN1
chr3184104378184104446+3'-UTR,CDS,intron-Distal3.6200217.02354HepG2PABPN1
chr3184104722184104736+3'-UTR,CDS,intron-Distal,intron-Proximal4.5046712.79935HepG2PRPF8
chr3184103900184103947+3'-UTR,CDS,intron-Distal4.7434524.77674HepG2PPIG
chr3184107361184107400+3'-UTR,intron-Distal3.446825.60389HepG2PPIG
chr3184106415184106486+3'-UTR,CDS,intron-Distal4.180688.51579HepG2EIF3H
chr3184106776184106783+3'-UTR,CDS,intron-Distal3.386178.80324HepG2LSM11
chr3184103862184103898+3'-UTR,CDS,intron-Distal4.5180217.60710HepG2PABPN1
chr3184104812184104897+3'-UTR,CDS,intron-Distal,intron-Proximal4.0892712.42306HepG2AQR
chr3184100159184100208+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.365596.96093HepG2PRPF4
chr3184106373184106422+3'-UTR,CDS,intron-Distal,intron-Proximal4.6586323.23542HepG2PPIG
chr3184105239184105266+3'-UTR,CDS,intron-Distal,intron-Proximal5.7013210.63730HepG2PPIG
chr3184103933184103947+3'-UTR,CDS,intron-Distal5.0241914.40770HepG2PABPN1
chr3184102805184102859+3'-UTR,CDS,intron-Distal,intron-Proximal3.169434.88392HepG2FASTKD2
chr3184100533184100552+3'-UTR,5'-UTR,CDS,intron-Distal5.9818211.86816HepG2PPIG
chr3184106748184106776+3'-UTR,CDS,intron-Distal3.3685015.67809HepG2LSM11
chr3184099722184099807+3'-UTR,5'-UTR,CDS,intron-Distal3.147827.57988HepG2PRPF4
chr3184107506184107562+3'-UTR,intron-Distal3.455265.63808HepG2EIF3H
chr3184106680184106742+3'-UTR,CDS,intron-Distal,intron-Proximal3.213553.30450HepG2ZC3H11A
chr3184106371184106473+3'-UTR,CDS,intron-Distal,intron-Proximal3.546487.41653HepG2BUD13
chr3184103007184103027+3'-UTR,CDS,intron-Distal,intron-Proximal4.0556110.00858HepG2PABPN1
chr3184107505184107555+3'-UTR,intron-Distal4.7663416.97652HepG2PABPN1
chr3184102802184102886+3'-UTR,CDS,intron-Distal,intron-Proximal3.061338.22760HepG2BUD13
chr3184105236184105265+3'-UTR,CDS,intron-Distal4.024919.48994HepG2PABPN1
chr3184102874184103007+3'-UTR,CDS,intron-Distal4.4011921.58685HepG2PABPN1
chr3184107508184107571+3'-UTR,intron-Distal3.123207.90382HepG2BCLAF1
chr3184105749184105806+3'-UTR,CDS,intron-Distal4.2513915.93081HepG2PPIG
chr3184104297184104355+3'-UTR,CDS,intron-Distal5.4187815.78782HepG2PABPN1
chr3184102836184102901+3'-UTR,CDS,intron-Distal3.334418.80324HepG2LSM11
chr3184107409184107473+3'-UTR,intron-Distal3.377676.97453HepG2LSM11
chr3184097877184097953+5'-UTR,intron-Distal4.385856.63452HepG2PCBP1
chr3184100731184100772+5'-UTR,intron-Distal,intron-Proximal3.765353.12708HepG2RBM5
chr3184099020184099067+5'-UTR,CDS,intron-Distal,intron-Proximal4.073095.01944HepG2UCHL5
chr3184100735184100789+5'-UTR,intron-Distal,intron-Proximal4.521564.82767HepG2SF3B4
chr3184099021184099065+5'-UTR,CDS,intron-Distal,intron-Proximal3.500489.03599HepG2GRWD1
chr3184102323184102412+5'-UTR,CDS,intron-Distal,intron-Proximal3.5931111.73537HepG2BCLAF1
chr3184100898184100949+5'-UTR,CDS,intron-Distal3.739696.48632HepG2PRPF4
chr3184099136184099152+5'-UTR,CDS,intron-Distal5.3903110.28350HepG2PABPN1
chr3184100785184100837+5'-UTR,CDS,intron-Distal,intron-Proximal3.401814.85249HepG2U2AF2
chr3184102461184102482+5'-UTR,CDS,intron-Distal,intron-Proximal3.669239.18020HepG2LSM11
chr3184100861184100915+5'-UTR,CDS,intron-Distal4.2118315.60869HepG2PPIG
chr3184098960184099035+5'-UTR,CDS,intron-Distal,intron-Proximal3.402357.83535HepG2SF3A3
chr3184100877184100949+5'-UTR,CDS,intron-Distal3.9453112.28745HepG2BCLAF1
chr3184100537184100560+5'-UTR,CDS,intron-Distal3.616624.25147HepG2LSM11
chr3184101099184101187+5'-UTR,CDS,intron-Distal,intron-Proximal3.4878117.32370HepG2LSM11
chr3184100700184100723+5'-UTR,CDS,intron-Distal3.110378.24193HepG2PABPN1
chr3184100757184100856+5'-UTR,CDS,intron-Distal,intron-Proximal3.367996.18174HepG2EFTUD2
chr3184102398184102462+5'-UTR,CDS,intron-Distal4.6922316.43475HepG2PABPN1
chr3184099022184099063+5'-UTR,CDS,intron-Distal,intron-Proximal5.0773231.24158HepG2PPIG
chr3184102324184102373+5'-UTR,CDS,intron-Distal,intron-Proximal4.183325.75388HepG2BUD13
chr3184099081184099141+5'-UTR,CDS,intron-Distal3.235714.02525HepG2HLTF
chr3184100813184100865+5'-UTR,CDS,intron-Distal3.143795.77812HepG2EIF3H
chr3184100872184100920+5'-UTR,CDS,intron-Distal4.3534019.18973HepG2PABPN1
chr3184100535184100597+5'-UTR,CDS,intron-Distal,intron-Proximal3.106695.75634HepG2PRPF8
chr3184101374184101430+5'-UTR,CDS,intron-Distal3.2571612.53083HepG2BCLAF1
chr3184102324184102345+5'-UTR,CDS,intron-Distal,intron-Proximal3.224294.36388HepG2EIF3H
chr3184100665184100689+5'-UTR,CDS,intron-Distal,intron-Proximal3.866468.97221HepG2PABPN1
chr3184102323184102369+5'-UTR,CDS,intron-Distal,intron-Proximal3.725579.69902HepG2LSM11
chr3184101129184101187+5'-UTR,CDS,intron-Distal4.7885427.83588HepG2PABPN1
chr3184097883184097970+5'-UTR,intron-Distal3.9950324.87183HepG2DDX59
chr3184097995184098152+5'-UTR,CDS,intron-Distal5.46301400.00000HepG2DDX59
chr3184100804184100844+5'-UTR,CDS,intron-Distal3.1995811.32585HepG2PABPN1
chr3184102324184102369+5'-UTR,CDS,intron-Distal,intron-Proximal5.3458318.07355HepG2PPIG
chr3184102462184102482+5'-UTR,CDS,intron-Distal,intron-Proximal4.6715610.37618HepG2PABPN1
chr3184100680184100725+5'-UTR,CDS,intron-Distal3.714786.89257HepG2LSM11
chr3184099144184099152+5'-UTR,CDS,intron-Distal3.6950012.43843HepG2PPIG
chr3184100830184100860+5'-UTR,CDS,intron-Distal3.682096.38589HepG2LSM11
chr3184101310184101354+5'-UTR,CDS,intron-Distal,intron-Proximal5.6226422.72897HepG2PABPN1
chr3184100940184100951+5'-UTR,CDS,intron-Distal4.1917611.27084HepG2PPIG
chr3184102409184102460+5'-UTR,CDS,intron-Distal4.6222819.08121HepG2PPIG
chr3184101310184101374+5'-UTR,CDS,intron-Distal,intron-Proximal3.7948013.09328HepG2BCLAF1
chr3184102324184102364+5'-UTR,CDS,intron-Distal,intron-Proximal4.173474.79286HepG2PRPF4
chr3184102384184102482+5'-UTR,CDS,intron-Distal,intron-Proximal3.148524.52197HepG2FASTKD2
chr3184102400184102480+5'-UTR,CDS,intron-Distal4.009774.84752HepG2UCHL5
chr3184100844184100872+5'-UTR,CDS,intron-Distal4.0719311.39745HepG2PABPN1
chr3184102323184102362+5'-UTR,CDS,intron-Distal,intron-Proximal5.6585913.36428HepG2PABPN1
chr3184101099184101129+5'-UTR,CDS,intron-Distal,intron-Proximal4.0592918.24482HepG2PABPN1
chr3184098863184098883+5'-UTR,CDS,intron-Distal,intron-Proximal4.0068515.84600HepG2PPIG
chr3184101341184101365+5'-UTR,CDS,intron-Distal3.512259.57146HepG2LSM11
chr3184101099184101199+5'-UTR,CDS,intron-Distal,intron-Proximal3.3284816.36156HepG2BCLAF1
chr3184101388184101431+5'-UTR,CDS,intron-Distal,intron-Proximal3.9912913.18245HepG2LSM11
chr3184102403184102461+5'-UTR,CDS,intron-Distal3.4879210.72776HepG2LSM11
chr3184101354184101416+5'-UTR,CDS,intron-Distal5.0199625.99361HepG2PABPN1
chr3184101365184101388+5'-UTR,CDS,intron-Distal4.7119611.66847HepG2LSM11
chr3184101315184101339+5'-UTR,CDS,intron-Distal3.7424310.69967HepG2PPIG
chr3184100803184100861+5'-UTR,CDS,intron-Distal,intron-Proximal4.1606826.73857HepG2PPIG
chr3184102327184102377+5'-UTR,CDS,intron-Distal3.026863.21309HepG2GRWD1
chr3184100054184100099+5'-UTR,intron-Distal,intron-Proximal3.560866.16549HepG2U2AF2
chr3184101318184101422+5'-UTR,CDS,intron-Distal3.454775.11909HepG2HLTF
chr3184098948184099044+5'-UTR,CDS,intron-Distal,intron-Proximal3.2560910.61179HepG2SF3B4
chr3184100926184100951+5'-UTR,CDS,intron-Distal3.5624210.42251HepG2PABPN1
chr3184099065184099135+5'-UTR,CDS,intron-Distal3.8074012.02500HepG2GRWD1
chr3184101310184101356+5'-UTR,CDS,intron-Distal,intron-Proximal3.519634.70769HepG2ZC3H11A
chr3184098022184098142+5'-UTR,CDS,intron-Distal4.3948330.84805HepG2PCBP2
chr3184100678184100725+5'-UTR,CDS,intron-Distal3.8322218.30164HepG2PPIG
chr3184101095184101184+5'-UTR,CDS,intron-Distal,intron-Proximal3.379356.98206HepG2PRPF4
chr3184099061184099136+5'-UTR,CDS,intron-Distal4.2403417.77872HepG2PABPN1
chr3184101356184101421+5'-UTR,CDS,intron-Distal4.515005.51435HepG2ZC3H11A
chr3184102460184102481+5'-UTR,CDS,intron-Distal3.562789.28206HepG2PPIG
chr3184101416184101430+5'-UTR,CDS,intron-Distal5.341628.89358HepG2PABPN1
chr3184097883184097964+5'-UTR,intron-Distal3.9142313.81529HepG2HNRNPK
chr3184099067184099151+5'-UTR,CDS,intron-Distal3.964328.63853HepG2UCHL5
chr3184101339184101431+5'-UTR,CDS,intron-Distal,intron-Proximal5.4234142.35848HepG2PPIG
chr3184101101184101199+5'-UTR,CDS,intron-Distal4.8176136.85152HepG2PPIG
chr3184097964184098161+5'-UTR,CDS,intron-Distal4.2182638.75858HepG2HNRNPK
chr3184100804184100830+5'-UTR,CDS,intron-Distal3.210744.06954HepG2LSM11
chr3184101319184101431+5'-UTR,CDS,intron-Distal,intron-Proximal3.6938812.52393HepG2PRPF4
chr3184101108184101201+5'-UTR,CDS,intron-Distal3.060054.49612HepG2HLTF
chr3184099077184099144+5'-UTR,CDS,intron-Distal4.2182732.47058HepG2PPIG
chr3184098212184098254+CDS,intron-Distal4.2848717.03352HepG2PPIG
chr3184098489184098545+CDS,intron-Distal3.281396.65375HepG2PRPF4
chr3184098479184098489+CDS,intron-Distal,intron-Proximal3.190316.02430HepG2PPIG
chr3184098504184098544+CDS,intron-Distal4.2390621.84835HepG2PPIG
chr3184098558184098584+CDS,intron-Distal,intron-Proximal4.6189741.15677HepG2PPIG
chr3184098541184098583+CDS,intron-Distal3.282604.77157HepG2UCHL5
chr3184098492184098551+CDS,intron-Distal3.045125.15270HepG2GRWD1
chr3184098504184098551+CDS,intron-Distal3.587117.68275HepG2PABPN1
chr3184098579184098678+CDS,intron-Distal,intron-Proximal3.4056815.17890HepG2EFTUD2
chr3184098544184098558+CDS,intron-Distal4.7108336.61377HepG2PPIG
chr3184098152184098201+CDS,intron-Distal3.6620317.96654HepG2DDX59
chr3184098497184098583+CDS,intron-Distal3.935857.11367HepG2SRSF9
chr3184104035184104075+intron-Distal,intron-Proximal4.202924.61506HepG2EFTUD2
chr3184098370184098441+intron-Distal,intron-Proximal3.011638.90039HepG2PRPF8
chr3184099866184099922+intron-Distal,intron-Proximal3.022073.02714HepG2RBM5
chr3184098703184098746+intron-Distal4.434474.77477HepG2RBFOX2
chr3184098345184098430+intron-Distal,intron-Proximal3.288087.20196HepG2RBFOX2
chr3184103994184104016+intron-Distal,intron-Proximal4.430563.71570HepG2BCLAF1
chr3184098612184098669+intron-Distal,intron-Proximal3.5310418.25347HepG2PRPF8
chr3184098942184098983+intron-Distal,intron-Proximal4.014103.27601HepG2RBM5
chr3184103980184104010+intron-Distal,intron-Proximal4.356848.98365HepG2PPIG
chr3184098273184098320+intron-Distal,intron-Proximal3.154763.51682HepG2RBFOX2
chr3184104544184104587+intron-Distal,intron-Proximal3.548986.86197HepG2PRPF8
chr3184103969184104021+intron-Distal,intron-Proximal4.170229.00124HepG2PRPF8
chr3184099816184099874+intron-Distal,intron-Proximal3.5312810.62901HepG2PRPF8
chr3184104770184104801+intron-Distal,intron-Proximal4.785724.62947HepG2AQR
chr3184099822184099907+intron-Distal,intron-Proximal3.083054.37565HepG2TIA1
chr3184104740184104806+intron-Distal,intron-Proximal3.393494.81289HepG2RBM22
chr3184104736184104772+intron-Distal,intron-Proximal6.7150119.08167HepG2PRPF8
chr3184098609184098674+intron-Distal,intron-Proximal3.3564913.08589HepG2RBM22
chr3184104557184104628+intron-Distal,intron-Proximal4.150466.32943HepG2SF3B4
chr3184098597184098651+intron-Distal,intron-Proximal3.969146.63111HepG2XRN2
chr3184104779184104802+intron-Distal,intron-Proximal4.673335.35117HepG2PRPF8
chr3184103985184104035+intron-Distal,intron-Proximal3.684656.22597HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CHRD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CHRD is not available on ENCORE database.

  • 102 RBPs can affect the levels of CHRD.  








The Knockdown/knockout RNA-Seq assay for CHRD is not available on ENCORE database.





102 RBPs can affect the gene expression of CHRD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CHRDENSG00000090539.112188.446701499.557100.545305.129603.88750HepG2ABCF1
CHRDENSG00000090539.111256.094801711.20950-0.446104.661603.91130HepG2ACO1
CHRDENSG00000090539.11895.544701614.91380-0.850602.256601.77180HepG2AKAP1
CHRDENSG00000090539.111315.241501718.97890-0.386202.708101.94880HepG2AKAP8L
CHRDENSG00000090539.112256.268201336.045800.755904.897303.86500HepG2ASCC1
CHRDENSG00000090539.112095.991601614.012700.376902.321001.68320HepG2AUH
CHRDENSG00000090539.111408.02220695.445701.017609.078607.57630HepG2BCLAF1
CHRDENSG00000090539.111575.96180459.670401.7775018.8030017.45190HepG2BOP1
CHRDENSG00000090539.111588.076001123.221600.499505.372503.68650HepG2BUD13
CHRDENSG00000090539.111811.589001280.238800.500703.147602.10340HepG2CCAR1
CHRDENSG00000090539.112388.790701710.512500.4818010.638909.50740HepG2CKAP4
CHRDENSG00000090539.111633.988301234.564700.404303.165101.98170HepG2CPSF7
CHRDENSG00000090539.111086.05220548.115800.986406.907105.31260HepG2YBX3
CHRDENSG00000090539.111579.228901092.672500.5313011.7658010.40800HepG2DAZAP1
CHRDENSG00000090539.111947.712401582.474200.299502.942902.08510HepG2DDX19B
CHRDENSG00000090539.111556.303501048.483400.569706.208404.75270HepG2DDX5
CHRDENSG00000090539.113213.153101637.079700.9728039.2515037.48040HepG2DKC1
CHRDENSG00000090539.11840.45480538.147300.643105.718504.73890HepG2DNAJC21
CHRDENSG00000090539.111295.27570533.484401.2796048.9822046.52340HepG2DNAJC2
CHRDENSG00000090539.111485.979001061.663700.485002.672001.76300HepG2EEF2
CHRDENSG00000090539.111998.481901411.036800.502002.334301.74520HepG2EIF4A3
CHRDENSG00000090539.111540.360701078.015600.514802.473901.67420HepG2EIF4G1
CHRDENSG00000090539.111968.980501032.665100.931003.457102.55460HepG2EIF4G2
CHRDENSG00000090539.111686.347801298.769800.376702.873701.76160HepG2ESF1
CHRDENSG00000090539.112752.033301853.241700.570306.617405.75370HepG2ETF1
CHRDENSG00000090539.111036.297501671.86880-0.690003.872302.88470HepG2EWSR1
CHRDENSG00000090539.111119.201401514.11910-0.436003.359102.51820HepG2FIP1L1
CHRDENSG00000090539.112214.229401321.140400.744905.426704.50800HepG2G3BP1
CHRDENSG00000090539.112648.663601403.366600.916308.228906.67630HepG2G3BP2
CHRDENSG00000090539.111132.66680767.166600.562003.926402.84500HepG2GEMIN5
CHRDENSG00000090539.111480.30280478.190801.6301015.1104013.73330HepG2GPKOW
CHRDENSG00000090539.11875.80150543.303900.688702.762302.11620HepG2HNRNPA1
CHRDENSG00000090539.11954.37620604.354700.659101.935001.34330HepG2HNRNPC
CHRDENSG00000090539.111550.72200756.324701.0358030.7164028.74630HepG2HNRNPF
CHRDENSG00000090539.113633.844401339.215601.4400031.1699029.09190HepG2HNRNPK
CHRDENSG00000090539.111643.61680995.331500.7235020.6724018.99390HepG2HNRNPL
CHRDENSG00000090539.111011.49530456.357901.148203.941603.20360HepG2HNRNPLL
CHRDENSG00000090539.11833.267501044.47310-0.325902.725701.78190HepG2HNRNPM
CHRDENSG00000090539.111520.49720600.356901.3406050.1105047.79890HepG2HNRNPU
CHRDENSG00000090539.111723.69470744.762401.2106022.8916021.05420HepG2IGF2BP1
CHRDENSG00000090539.112086.822801342.690800.636102.625701.96590HepG2IGF2BP2
CHRDENSG00000090539.11638.975401260.94180-0.980702.218301.34680HepG2IGF2BP3
CHRDENSG00000090539.111367.15080863.657700.662502.549601.41690HepG2KHDRBS1
CHRDENSG00000090539.112589.286401350.928200.938503.616902.45040HepG2KHSRP
CHRDENSG00000090539.112608.464401425.353200.871807.676406.59890HepG2MAGOH
CHRDENSG00000090539.11950.98130465.707001.029902.181301.32870HepG2MTPAP
CHRDENSG00000090539.112038.898901466.743100.475102.004301.46080HepG2NCBP2
CHRDENSG00000090539.111162.29700779.269200.576702.782701.36080HepG2NIP7
CHRDENSG00000090539.111894.319801083.493500.805903.017502.22190HepG2NOL12
CHRDENSG00000090539.11658.21650383.066600.780904.977803.07830HepG2NOLC1
CHRDENSG00000090539.111218.18860723.279300.752003.439802.21060HepG2NONO
CHRDENSG00000090539.11848.31300404.742001.067503.478002.63780HepG2NSUN2
CHRDENSG00000090539.111217.456801651.48550-0.439904.262902.27320HepG2NUP35
CHRDENSG00000090539.112145.29650827.582101.3741014.5921012.52040HepG2PABPC1
CHRDENSG00000090539.111113.27750535.465201.0558019.5629017.73940HepG2PPIL4
CHRDENSG00000090539.111088.12920668.648500.7024012.8052011.32150HepG2PRPF4
CHRDENSG00000090539.11909.146301405.18100-0.628206.148605.39600HepG2PTBP1
CHRDENSG00000090539.112330.247301034.298101.1717029.6139027.93890HepG2PUF60
CHRDENSG00000090539.111309.752301097.963200.254403.139602.51770HepG2PUM1
CHRDENSG00000090539.11808.718001097.15490-0.440104.461603.62150HepG2PUM2
CHRDENSG00000090539.11316.03670743.91080-1.235002.968602.23970HepG2RAVER1
CHRDENSG00000090539.11588.480401548.93810-1.3962034.1115032.68200HepG2RBM22
CHRDENSG00000090539.111730.850801381.048800.325602.726302.05660HepG2RBM25
CHRDENSG00000090539.111186.66400844.023500.491502.807901.73960HepG2RCC2
CHRDENSG00000090539.112049.122301563.740300.389906.247805.49050HepG2NELFE
CHRDENSG00000090539.112043.275701456.577100.488206.634105.73900HepG2RECQL
CHRDENSG00000090539.111571.49530814.770600.947604.444703.60840HepG2RPLP0
CHRDENSG00000090539.111996.34750910.024701.133308.434007.06110HepG2RPS3A
CHRDENSG00000090539.111051.27360534.626900.9754024.3889022.73860HepG2SAFB2
CHRDENSG00000090539.11534.01690841.42560-0.656002.854701.89990HepG2SERBP1
CHRDENSG00000090539.111708.343902295.23080-0.426002.443501.81120HepG2SF3A3
CHRDENSG00000090539.11884.90000451.630000.970303.057802.31600HepG2SF3B1
CHRDENSG00000090539.111935.37830991.751500.9645037.5203035.56930HepG2SLBP
CHRDENSG00000090539.111005.44500502.544201.000403.417302.54390HepG2SNRNP70
CHRDENSG00000090539.111123.082901749.41730-0.6394011.1818010.35760HepG2SRFBP1
CHRDENSG00000090539.11597.612101526.90380-1.3533023.1807022.10110HepG2SRSF1
CHRDENSG00000090539.111724.255601021.230900.7556010.192709.09410HepG2SRSF5
CHRDENSG00000090539.111524.41360743.069501.0366030.8744029.05220HepG2SRSF7
CHRDENSG00000090539.111505.065801242.286800.276703.275802.68560HepG2SRSF9
CHRDENSG00000090539.114434.148301518.818901.54560110.57440108.60130HepG2SSB
CHRDENSG00000090539.111404.69860792.056200.826504.155802.78150HepG2STIP1
CHRDENSG00000090539.111818.524301161.410400.6468017.0064015.67310HepG2SUCLG1
CHRDENSG00000090539.111381.90330783.499900.818605.644204.73090HepG2SUPV3L1
CHRDENSG00000090539.111260.40440583.248001.1116025.0021023.78410HepG2TIAL1
CHRDENSG00000090539.111721.07760588.580901.5479068.9963066.73430HepG2TRIM56
CHRDENSG00000090539.111372.028001010.482000.441203.600002.59100HepG2TUFM
CHRDENSG00000090539.11993.480701295.04590-0.382401.835601.31310HepG2U2AF1
CHRDENSG00000090539.112160.524401069.590201.014204.792303.67360HepG2UBE2L3
CHRDENSG00000090539.11922.58260462.745500.9954010.286308.82480HepG2UCHL5
CHRDENSG00000090539.112514.342702035.521600.304704.925604.03590HepG2UPF1
CHRDENSG00000090539.111403.83730717.091100.969004.721103.39270HepG2UPF2
CHRDENSG00000090539.112625.030902092.210600.327203.794802.58580HepG2UTP18
CHRDENSG00000090539.111267.249401965.21180-0.6330015.3574014.11630HepG2UTP3
CHRDENSG00000090539.112191.20150771.273801.5063029.9458027.71870HepG2XRN2
CHRDENSG00000090539.111537.393802238.68010-0.5422015.5091014.47710HepG2ZNF622
CHRDENSG00000090539.11108.7687064.731800.748602.458601.84190K562AKAP8L
CHRDENSG00000090539.1123.7778057.40810-1.271602.369701.81990K562AQR
CHRDENSG00000090539.1137.6465074.33300-0.981502.391701.31050K562CCDC124
CHRDENSG00000090539.1128.5023067.32600-1.240102.455301.53810K562CELF1
CHRDENSG00000090539.1111.6864032.69170-1.484102.395601.63000K562EIF4A3
CHRDENSG00000090539.117.0408033.99770-2.271604.067603.35500K562FXR1
CHRDENSG00000090539.1199.3768050.235100.984103.498702.49560K562HNRNPU
CHRDENSG00000090539.1149.6340014.755401.750003.564102.63460K562RPS19
CHRDENSG00000090539.1148.4803019.487301.314802.144401.51660K562TARDBP
CHRDENSG00000090539.1141.9272018.797501.157202.049201.35210K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CHRD is not available on ENCORE database.





19 RBPs can affect the splicing of CHRD :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECHRDENSG00000090539.11chr3+1841042791841045431841038331841039471841046321841047260.115000.000460.08922includedHepG2DKC1
SECHRDENSG00000090539.11chr3+184104279184104543184103833184103947184104632184104726-0.257000.000020.00118excludedHepG2HNRNPK
SECHRDENSG00000090539.11chr3+184105161184105265184104838184104895184105718184105821-0.320000.000000.00027excludedHepG2HNRNPK
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.339000.004680.05036excludedHepG2U2AF2
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.496000.000240.01998excludedHepG2AKAP1
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.415000.000540.03611excludedHepG2NCBP2
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.479000.000000.00000excludedHepG2FTO
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.420000.000010.00418excludedHepG2LARP4
SECHRDENSG00000090539.11chr3+184104279184104543184103833184103947184104632184104726-0.389000.000030.00415excludedHepG2HNRNPL
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.607000.000470.03826excludedHepG2IGF2BP3
SECHRDENSG00000090539.11chr3+184098863184098918184098479184098583184099022184099152-0.778000.000000.00000excludedHepG2PCBP1
SECHRDENSG00000090539.11chr3+1840988631840989181840984791840985831840990221840991520.425000.000170.04643includedHepG2FUBP3
SECHRDENSG00000090539.11chr3+1841051611841052651841048381841048951841057181841058210.154000.000920.04018includedHepG2HNRNPU
A3SSCHRDENSG00000090539.11chr3+184100643184100726184100672184100726184100421184100562-0.172000.002130.07409shorterHepG2U2AF1
A5SSCHRDENSG00000090539.11chr3+184103833184104543184103833184103947184104632184104726-0.242000.001400.08121shorterHepG2HNRNPK
A5SSCHRDENSG00000090539.11chr3+184104838184104908184104838184104895184105718184105821-0.339000.000730.04784shorterHepG2HNRNPK
A5SSCHRDENSG00000090539.11chr3+184103833184104543184103833184103947184104632184104726-0.446000.000220.08326shorterHepG2HNRNPL
RICHRDENSG00000090539.11chr3+1840988061840991521840988061840989181840990221840991520.323000.000540.05494includedHepG2DDX59
RICHRDENSG00000090539.11chr3+184103833184104726184103833184103947184104632184104726-0.709000.000090.01076excludedHepG2HNRNPL
RICHRDENSG00000090539.11chr3+184098806184099152184098806184098918184099022184099152-0.377000.000000.00085excludedHepG2HNRNPL
RICHRDENSG00000090539.11chr3+1841038331841045431841038331841039471841042791841045430.226000.000440.00693includedHepG2SF3A3
RICHRDENSG00000090539.11chr3+1840988061840991521840988061840989181840990221840991520.388000.008460.07835includedHepG2PRPF8
RICHRDENSG00000090539.11chr3+184103833184104726184103833184103947184104632184104726-0.663000.000710.08351excludedHepG2NOL12
RICHRDENSG00000090539.11chr3+1840988061840991521840988061840989181840990221840991520.378000.000170.00717includedHepG2FTO
RICHRDENSG00000090539.11chr3+1841038331841047261841038331841045431841046321841047260.074000.000340.00465includedHepG2U2AF1
RICHRDENSG00000090539.11chr3+1840988061840991521840988061840989181840990221840991520.231000.002020.02106includedHepG2U2AF1
RICHRDENSG00000090539.11chr3+1841004211841007181841004211841005621841006541841007180.080000.011370.09435includedHepG2NCBP2
RICHRDENSG00000090539.11chr3+1840988061840991521840988061840989181840990221840991520.281000.003530.03458includedHepG2RBM22
RICHRDENSG00000090539.11chr3+1841038331841045431841038331841039471841042791841045430.216000.003870.05385includedHepG2SRSF9
RICHRDENSG00000090539.11chr3+1841038331841045431841038331841039471841042791841045430.107000.010890.09262includedHepG2HNRNPK
RICHRDENSG00000090539.11chr3+1841038331841047261841038331841045431841046321841047260.080000.006000.05667includedHepG2HNRNPK
RICHRDENSG00000090539.11chr3+1840999321841003181840999321840999961841001761841003180.077000.011090.09391includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CHRD is not avaliable on ENCORE database.