CYTH2

General Information

Gene Name       : CYTH2
Gene ID             : ENSG00000105443.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CYTH2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CYTH2ENSG00000105443.145.4412.779.11ENCSR000AEF
HepG2CYTH2ENSG00000105443.1419.6214.9217.27ENCSR985KAT
K562CYTH2ENSG00000105443.1424.3421.2022.77ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CYTH2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CYTH2 RNA is bound by 32 proteins.  







eCLIP assay for CYTH2 is not avaliable on ENCORE database.





32 proteins are bound to CYTH2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194898170648981764+3'-UTR,CDS3.166464.87883K562BUD13
chr194898263148982664+3'-UTR,polyA_site4.141316.82051HepG2QKI
chr194898311148983141+3'-UTR4.237663.60290K562AKAP8L
chr194898306548983158+3'-UTR4.080544.71605K562FUS
chr194898139848981459+3'-UTR,CDS,intron-Proximal3.427408.43093HepG2PRPF8
chr194898238848982573+3'-UTR,CDS3.0040611.58049K562DDX24
chr194898301548983053+3'-UTR3.241323.12941K562UCHL5
chr194898176348981852+3'-UTR,CDS,intron-Proximal3.568804.77403HepG2SRSF1
chr194898248548982585+3'-UTR3.616798.01252K562ZNF622
chr194898317248983220+3'-UTR3.822433.00996K562BUD13
chr194898263348982697+3'-UTR,polyA_site4.158093.88726HepG2TIAL1
chr194898309848983136+3'-UTR3.738116.22597HepG2EFTUD2
chr194898238048982487+3'-UTR,CDS3.175784.05119HepG2UCHL5
chr194898250048982577+3'-UTR3.087915.46976K562UCHL5
chr194898249148982543+3'-UTR4.042728.00190HepG2GRWD1
chr194898527848985347+3'-UTR3.2610013.31748HepG2U2AF2
chr194898263848982664+3'-UTR,polyA_site4.767585.48475K562TIA1
chr194898333848983396+3'-UTR,intron-Proximal4.2213515.72013HepG2PRPF8
chr194898310448983159+3'-UTR3.710463.37821K562XRCC6
chr194898170548981767+3'-UTR,CDS3.428104.89070K562UCHL5
chr194898237948982483+3'-UTR,CDS,intron-Proximal3.718639.48271K562ZNF622
chr194898266448982751+3'-UTR3.308045.62577HepG2QKI
chr194898423148984268+3'-UTR4.258633.36385K562UCHL5
chr194898327248983383+3'-UTR,intron-Proximal3.073587.16955HepG2GRWD1
chr194898259548982648+3'-UTR,polyA_site4.477285.38549K562PUM2
chr194898390948983970+3'-UTR,intron-Proximal3.827176.57106HepG2SF3B4
chr194898420048984272+3'-UTR4.215927.08290K562AKAP8L
chr194898171848981834+3'-UTR,CDS3.3277412.63903HepG2PPIG
chr194898411648984168+3'-UTR4.656574.50934HepG2RBFOX2
chr194898311148983216+3'-UTR3.322203.75965HepG2DROSHA
chr194898153348981605+3'-UTR,CDS,intron-Proximal3.887423.99145HepG2SRSF1
chr194898436148984419+3'-UTR4.240144.09073K562SLTM
chr194898527548985361+3'-UTR3.486975.15343HepG2PABPN1
chr194898478448984823+3'-UTR3.598564.25221HepG2LSM11
chr194898169348981785+3'-UTR,CDS,intron-Proximal3.749563.48077HepG2UCHL5
chr194898479448984831+3'-UTR3.394066.03230HepG2HNRNPC
chr194898176148981844+3'-UTR,CDS3.237476.73886K562ZNF622
chr194898334248983395+3'-UTR,intron-Proximal4.449077.80986K562PRPF8
chr194898169448981711+3'-UTR,CDS,intron-Proximal3.466166.54857HepG2PPIG
chr194898238448982489+3'-UTR,CDS3.491599.10235K562UCHL5
chr194898248348982554+3'-UTR3.281205.33133K562BUD13
chr194898238848982491+3'-UTR,CDS3.9401412.52462HepG2GRWD1
chr194898418648984259+3'-UTR3.988147.83018HepG2PABPN1
chr194898402548984116+3'-UTR3.396524.11903HepG2PABPN1
chr194898238048982484+3'-UTR,CDS3.284938.77728HepG2PPIG
chr194898399448984059+3'-UTR,intron-Proximal3.8056316.54897HepG2U2AF2
chr194898169448981761+3'-UTR,CDS,intron-Proximal4.198026.83823K562DDX24
chr194898336548983413+3'-UTR,intron-Proximal3.330724.31340HepG2RBM22
chr194897259748972718+5'-UTR,intron-Distal3.246587.80195HepG2NCBP2
chr194897272848972784+5'-UTR,CDS,intron-Distal,intron-Proximal3.728283.14999HepG2GRWD1
chr194897273548972783+5'-UTR,CDS,intron-Distal3.398144.27210HepG2NCBP2
chr194897276248972784+5'-UTR,CDS,intron-Distal,intron-Proximal5.178495.86613HepG2PPIG
chr194897366748973709+CDS4.559668.68543HepG2PPIG
chr194897567748975701+CDS,intron-Proximal4.070803.59941K562UCHL5
chr194897655148976609+CDS,intron-Proximal3.8803210.49170K562DDX24
chr194897660948976634+CDS4.350444.67299K562DDX24
chr194897725248977275+CDS,intron-Proximal3.734654.20387K562ZNF622
chr194897820448978238+CDS,intron-Proximal4.2697414.91325HepG2PRPF8
chr194897821148978250+CDS,intron-Proximal4.6778911.08359K562AQR
chr194897560148975619+CDS3.551063.40338K562DDX24
chr194897658048976636+CDS,intron-Proximal5.0995513.20429HepG2PPIG
chr194897373248973757+CDS3.690923.90826K562ZNF622
chr194897369948973749+CDS3.381554.06757K562UCHL5
chr194897716048977214+CDS,intron-Proximal6.1937216.25971HepG2PPIG
chr194897820648978211+CDS,intron-Proximal4.363298.61602K562AQR
chr194897360548973639+3'-UTR,CDS,intron-Proximal3.751594.42776HepG2BUD13
chr194897390948973973+CDS,intron-Distal,intron-Proximal5.8376911.65826K562AQR
chr194897569948975717+CDS,intron-Proximal3.623633.04871K562AQR
chr194897558748975637+CDS3.559403.90826K562ZNF622
chr194897747248977538+CDS4.538895.85983HepG2GRWD1
chr194897565748975701+CDS,intron-Proximal3.702255.14149K562DDX24
chr194897557948975651+CDS,intron-Proximal4.0972514.02437HepG2PPIG
chr194897557548975701+CDS,intron-Proximal4.773157.13798HepG2SDAD1
chr194897810748978211+CDS,intron-Proximal3.2880910.35370HepG2PPIG
chr194897559948975700+CDS3.197484.29582HepG2HLTF
chr194897390448973927+CDS,intron-Distal,intron-Proximal3.466169.40911HepG2PPIG
chr194897743848977516+CDS,intron-Proximal3.070145.65791K562ZNF622
chr194897566048975703+CDS,intron-Proximal3.325094.45064HepG2GRWD1
chr194897655348976582+CDS,intron-Proximal3.668163.68471HepG2BCLAF1
chr194897559948975651+CDS3.730906.39499HepG2GRWD1
chr194897553448975601+CDS,intron-Proximal4.789019.04180K562SF3B4
chr194897823748978294+CDS,intron-Proximal4.279788.98393HepG2RBM22
chr194897370948973741+CDS4.2888510.43162HepG2PPIG
chr194897385948973921+CDS,intron-Distal,intron-Proximal3.239255.87296K562DDX24
chr194897721448977276+CDS,intron-Proximal4.3739713.53097HepG2PPIG
chr194897817348978246+CDS,intron-Proximal4.853016.03362HepG2AQR
chr194897820648978297+CDS,intron-Proximal3.386838.60356K562PRPF8
chr194897656048976636+CDS,intron-Proximal3.287664.33023K562ZNF622
chr194897655448976580+CDS,intron-Proximal3.454805.21025HepG2PPIG
chr194897753048977585+CDS3.025484.85880HepG2PPIG
chr194897360848973667+3'-UTR,CDS,intron-Proximal4.8868111.38699HepG2PPIG
chr194897385848973904+CDS,intron-Distal,intron-Proximal3.7113213.65160HepG2PPIG
chr194897565148975701+CDS,intron-Proximal3.907329.28206HepG2PPIG
chr194897379748973861+CDS,intron-Distal,intron-Proximal3.985357.38843HepG2BUD13
chr194897374148973758+CDS,intron-Proximal3.743216.70085HepG2PPIG
chr194897558548975677+CDS3.715898.06634K562UCHL5
chr194897823848978249+CDS,intron-Proximal4.1746310.48654HepG2PRPF8
chr194897412648974216+intron-Distal4.127143.85435K562PRPF8
chr194898195148982055+intron-Distal4.356843.45219HepG2RBFOX2
chr194898080048980884+intron-Distal3.080315.17453K562PRPF8
chr194898197748982031+intron-Distal3.105483.25786HepG2FAM120A
chr194898203148982091+intron-Distal4.221404.28089HepG2FAM120A
chr194898078348980888+intron-Distal4.132427.31085HepG2PCBP2
chr194898081048980883+intron-Distal4.429357.15298K562AQR
chr194897378748973856+intron-Proximal5.053149.24251HepG2EFTUD2
chr194897571748975746+intron-Proximal4.929355.17615K562AQR
chr194897379048973852+intron-Proximal4.893064.83371K562EFTUD2
chr194897379548973856+intron-Proximal5.285687.36555K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CYTH2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CYTH2 is not available on ENCORE database.

  • 66 RBPs can affect the levels of CYTH2.  








The Knockdown/knockout RNA-Seq assay for CYTH2 is not available on ENCORE database.





66 RBPs can affect the gene expression of CYTH2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CYTH2ENSG00000105443.91670.530201043.998500.678106.165105.40720HepG2AKAP1
CYTH2ENSG00000105443.91287.42010977.800100.396802.761701.82590HepG2BCCIP
CYTH2ENSG00000105443.91040.53620834.965900.317402.141301.60970HepG2BOP1
CYTH2ENSG00000105443.91031.727301488.52030-0.528807.819806.81040HepG2CKAP4
CYTH2ENSG00000105443.9433.01680604.07850-0.480302.784601.70540HepG2CSTF2
CYTH2ENSG00000105443.91808.330801462.051800.306605.015004.05990HepG2DAZAP1
CYTH2ENSG00000105443.91095.077101376.87430-0.330404.354903.33770HepG2DDX19B
CYTH2ENSG00000105443.91260.303701000.043300.333602.078901.52800HepG2DDX3X
CYTH2ENSG00000105443.9850.097801076.35920-0.340502.167201.35010HepG2EEF2
CYTH2ENSG00000105443.91645.35210825.831100.9944014.5643013.27110HepG2EIF2S1
CYTH2ENSG00000105443.91147.97020912.608500.330901.888201.35630HepG2EIF4A3
CYTH2ENSG00000105443.91725.50920888.613500.957309.802908.54650HepG2EIF4B
CYTH2ENSG00000105443.93625.173101808.789101.0029043.3412041.49990HepG2ETF1
CYTH2ENSG00000105443.92072.329701407.418700.558104.862103.86560HepG2FIP1L1
CYTH2ENSG00000105443.91413.67310767.861700.880404.128902.88860HepG2FTO
CYTH2ENSG00000105443.91009.22080668.124700.595006.174505.02490HepG2FUBP3
CYTH2ENSG00000105443.91488.95290920.880500.693107.672906.56350HepG2FXR1
CYTH2ENSG00000105443.91977.88200854.200801.2112020.6509018.91440HepG2G3BP1
CYTH2ENSG00000105443.91504.01550906.910200.729708.609707.02570HepG2G3BP2
CYTH2ENSG00000105443.9642.12440868.92440-0.436402.688202.05590HepG2GPKOW
CYTH2ENSG00000105443.91114.64430889.417800.325602.488801.87350HepG2HNRNPA1
CYTH2ENSG00000105443.91244.30090989.327100.330702.440201.78610HepG2HNRNPC
CYTH2ENSG00000105443.91538.86050865.074600.8309011.8216010.47580HepG2HNRNPK
CYTH2ENSG00000105443.91102.420801331.78270-0.272703.126802.41330HepG2HNRNPL
CYTH2ENSG00000105443.91119.91190829.231400.433403.263102.58630HepG2HNRNPLL
CYTH2ENSG00000105443.91565.76320868.258300.8506011.143109.88460HepG2IGF2BP2
CYTH2ENSG00000105443.91509.49180814.895900.889302.163601.30290HepG2IGF2BP3
CYTH2ENSG00000105443.91385.28830873.353400.665405.296703.86800HepG2KHSRP
CYTH2ENSG00000105443.91238.29490921.202400.426703.106402.41220HepG2MAGOH
CYTH2ENSG00000105443.91179.12430844.330800.481703.741102.91020HepG2PABPC4
CYTH2ENSG00000105443.91334.76620889.958000.584706.643705.86840HepG2PTBP1
CYTH2ENSG00000105443.91736.482201469.179600.241103.483002.83270HepG2PUM1
CYTH2ENSG00000105443.91845.440501468.083400.329903.582702.82510HepG2PUM2
CYTH2ENSG00000105443.91196.027701516.30980-0.342304.644303.88580HepG2PUS1
CYTH2ENSG00000105443.92870.999201511.809500.9252028.7888027.46900HepG2RBM22
CYTH2ENSG00000105443.91710.48870874.637400.9676012.8083011.41910HepG2RBM25
CYTH2ENSG00000105443.91295.59190990.353000.387501.957301.48490HepG2NELFE
CYTH2ENSG00000105443.91280.55420922.533200.473004.474903.71570HepG2RECQL
CYTH2ENSG00000105443.91317.237301020.623000.368004.853004.03950HepG2SMN1
CYTH2ENSG00000105443.9487.39400913.25240-0.905906.726705.50190HepG2SNRNP70
CYTH2ENSG00000105443.92766.433301707.526900.6960022.2720021.20570HepG2SRFBP1
CYTH2ENSG00000105443.9656.01800883.16650-0.428902.247601.35730HepG2SRSF3
CYTH2ENSG00000105443.91607.184201366.510600.233902.577301.96840HepG2SRSF5
CYTH2ENSG00000105443.91701.94040957.060400.8304010.254809.08980HepG2SUPV3L1
CYTH2ENSG00000105443.91078.09470798.636700.432803.750202.78370HepG2TIA1
CYTH2ENSG00000105443.91126.21910963.499600.225001.971201.47950HepG2TRIM56
CYTH2ENSG00000105443.9710.044201367.25740-0.9453012.8431011.69400HepG2UTP3
CYTH2ENSG00000105443.91148.94780796.945500.527709.072207.97470HepG2ZC3H8
CYTH2ENSG00000105443.91051.859601425.42430-0.438406.415405.60300K562AGGF1
CYTH2ENSG00000105443.91174.342401483.20530-0.336902.745902.09480K562AKAP8L
CYTH2ENSG00000105443.91956.445901397.065400.485705.166804.40800K562AQR
CYTH2ENSG00000105443.91286.126201556.21420-0.275002.683201.78480K562ATP5C1
CYTH2ENSG00000105443.9768.93770595.022700.369802.075501.32550K562BOP1
CYTH2ENSG00000105443.9784.19210616.281300.347502.434401.45980K562DDX3X
CYTH2ENSG00000105443.91506.047301180.572000.351204.556203.74730K562DDX47
CYTH2ENSG00000105443.91208.742801596.11860-0.401105.363304.09050K562DKC1
CYTH2ENSG00000105443.9863.04650676.861600.350503.306301.97160K562EIF2S1
CYTH2ENSG00000105443.91685.534401075.145200.6486012.6701011.30130K562EIF2S2
CYTH2ENSG00000105443.9732.99170579.783900.338202.712301.57580K562EIF4B
CYTH2ENSG00000105443.92067.659301556.500500.409605.870604.52440K562EIF4G2
CYTH2ENSG00000105443.9918.39730707.472300.376302.812301.95640K562FIP1L1
CYTH2ENSG00000105443.9719.85910545.601700.399802.467401.60550K562FTO
CYTH2ENSG00000105443.9826.81160669.557400.304302.358701.79160K562FXR1
CYTH2ENSG00000105443.9166.60070381.23960-1.194309.397807.94000K562G3BP2
CYTH2ENSG00000105443.9764.27240604.078800.339302.196201.48740K562GPKOW
CYTH2ENSG00000105443.9928.17190691.344300.424903.588002.92000K562HNRNPC
CYTH2ENSG00000105443.9785.96550617.217900.348602.423401.36900K562HNRNPF
CYTH2ENSG00000105443.91390.15530959.083300.535405.053403.99070K562HSPD1
CYTH2ENSG00000105443.9861.532001235.99830-0.520703.479302.46480K562NAA15
CYTH2ENSG00000105443.91028.97360803.222700.357202.644501.84610K562PPIG
CYTH2ENSG00000105443.9908.89230619.819900.552205.172303.88480K562PSIP1
CYTH2ENSG00000105443.91093.285901471.02800-0.428203.565202.96030K562PUS1
CYTH2ENSG00000105443.91016.963201433.21610-0.495006.726505.82840K562RBM15
CYTH2ENSG00000105443.91042.52030663.569900.651703.158702.25540K562RBM22
CYTH2ENSG00000105443.91457.656601141.707000.352403.481702.57280K562SF3A3
CYTH2ENSG00000105443.9694.63160396.222000.809807.072905.66620K562SF3B4
CYTH2ENSG00000105443.91153.34110686.838800.747706.902805.73590K562TARDBP
CYTH2ENSG00000105443.9918.87440662.568100.471703.102402.22750K562TIA1
CYTH2ENSG00000105443.91549.898601226.730300.337304.714303.80200K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CYTH2 is not available on ENCORE database.





12 RBPs can affect the splicing of CYTH2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSCYTH2ENSG00000105443.9chr19+4898132248981402489813254898140248978094489782060.215000.000140.01742longerHepG2HNRNPK
A3SSCYTH2ENSG00000105443.9chr19+4898132248981402489813254898140248978094489782060.355000.000000.00000longerHepG2U2AF2
A3SSCYTH2ENSG00000105443.9chr19+4898132248981402489813254898140248978094489782060.199000.000060.00371longerHepG2U2AF1
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.257000.000110.08809includedHepG2TROVE2
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.240000.006190.07484includedK562SF3B4
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981322489814020.069000.007570.04429includedK562PUS1
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981322489814020.259000.000000.00000includedHepG2SF3A3
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.395000.000000.00000includedHepG2U2AF2
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.212000.000390.07434includedHepG2EIF3D
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.233000.000030.00054includedHepG2U2AF1
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981322489814020.059000.000490.02994includedK562SBDS
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.243000.000060.00125includedHepG2HNRNPK
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.215000.003490.06457includedHepG2PTBP1
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981325489814020.307000.001350.01575includedK562EFTUD2
RICYTH2ENSG00000105443.9chr19+4897809448981402489780944897820648981322489814020.247000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CYTH2 is not avaliable on ENCORE database.