SAP30L

General Information

Gene Name       : SAP30L
Gene ID             : ENSG00000164576.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SAP30L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SAP30LENSG00000164576.1114.5310.9812.75ENCSR000AEF
HepG2SAP30LENSG00000164576.1127.0824.1525.61ENCSR985KAT
K562SAP30LENSG00000164576.1113.9816.7515.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SAP30L is not avaliable on ENCORE database.



Proteins bound to RNA
  • SAP30L RNA is bound by 3 proteins.  







eCLIP assay for SAP30L is not avaliable on ENCORE database.





3 proteins are bound to SAP30L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5153835630153835793+3'-UTR6.860048.89419K562PUM2
chr5153825584153825729+5'-UTR4.0533519.00134HepG2DDX3X
chr5153832950153833013+CDS,intron-Proximal3.797993.02321K562U2AF2
chr5153832901153833005+CDS,intron-Proximal4.579373.45799HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SAP30L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SAP30L is not available on ENCORE database.

  • 77 RBPs can affect the levels of SAP30L.  








The Knockdown/knockout RNA-Seq assay for SAP30L is not available on ENCORE database.





77 RBPs can affect the gene expression of SAP30L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SAP30LENSG00000164576.7468.20130284.939200.716405.524604.18290HepG2ADAR
SAP30LENSG00000164576.7170.22820680.78760-1.9997014.3366013.22380HepG2AKAP1
SAP30LENSG00000164576.7771.30360535.189100.527203.962503.04710HepG2CIRBP
SAP30LENSG00000164576.7366.57960485.79220-0.406202.908702.25280HepG2CELF1
SAP30LENSG00000164576.7407.42450522.36920-0.358502.801602.05530HepG2DAZAP1
SAP30LENSG00000164576.7450.25480361.485700.316702.182801.43590HepG2DDX19B
SAP30LENSG00000164576.7576.16840353.252100.705706.194005.22710HepG2DDX21
SAP30LENSG00000164576.7457.58520345.614100.404802.313501.48570HepG2DDX24
SAP30LENSG00000164576.7954.75230652.213200.549704.223503.46320HepG2DDX3X
SAP30LENSG00000164576.7448.20480331.874800.433402.370501.43350HepG2DDX5
SAP30LENSG00000164576.7388.64830560.09950-0.527202.669402.06230HepG2DDX6
SAP30LENSG00000164576.7595.79650373.946500.671907.556706.53990HepG2DKC1
SAP30LENSG00000164576.7202.04850286.92410-0.506002.853002.14190HepG2DNAJC21
SAP30LENSG00000164576.7205.72860284.38100-0.467102.849802.18970HepG2DNAJC2
SAP30LENSG00000164576.7487.89080333.542700.548604.123302.83260HepG2EIF3G
SAP30LENSG00000164576.7874.16500595.296800.554203.573602.84960HepG2EIF4A3
SAP30LENSG00000164576.7510.97400356.328900.519903.709002.45540HepG2ESF1
SAP30LENSG00000164576.7967.30980530.126200.8675016.7000015.42660HepG2ETF1
SAP30LENSG00000164576.7147.41520217.77110-0.562902.662801.51930HepG2FAM120A
SAP30LENSG00000164576.7404.75390600.38960-0.568902.674201.99390HepG2FXR1
SAP30LENSG00000164576.7413.04850557.07560-0.431601.887001.33240HepG2G3BP1
SAP30LENSG00000164576.7756.30650591.242300.355102.066901.30490HepG2G3BP2
SAP30LENSG00000164576.7383.43850289.672800.404501.965701.40960HepG2HNRNPA1
SAP30LENSG00000164576.7498.95300322.204300.630804.477103.60920HepG2HNRNPC
SAP30LENSG00000164576.7266.64210563.79490-1.080307.724606.60200HepG2HNRNPK
SAP30LENSG00000164576.7300.71110475.84540-0.662106.934605.91130HepG2HNRNPL
SAP30LENSG00000164576.7383.48470284.533000.430501.968801.42990HepG2HNRNPLL
SAP30LENSG00000164576.7189.35370286.61780-0.598002.946101.96420HepG2HNRNPM
SAP30LENSG00000164576.7422.09190308.415500.452603.020002.26610HepG2IGF2BP1
SAP30LENSG00000164576.7329.21900531.26740-0.690402.265001.38200HepG2IGF2BP3
SAP30LENSG00000164576.7375.58330569.51720-0.600603.066202.00280HepG2KHSRP
SAP30LENSG00000164576.7282.30130603.99870-1.097307.213706.23050HepG2MATR3
SAP30LENSG00000164576.7107.90690255.04300-1.241005.616604.15990HepG2METAP2
SAP30LENSG00000164576.7445.65440290.223200.618702.632401.68940HepG2MTPAP
SAP30LENSG00000164576.7237.32900517.97900-1.1260015.3430013.61970HepG2NOL12
SAP30LENSG00000164576.7398.48820550.74470-0.466802.021201.39530HepG2PABPC4
SAP30LENSG00000164576.7318.30430511.67720-0.684807.506906.58580HepG2PCBP1
SAP30LENSG00000164576.7386.05470520.62450-0.431403.318402.73010HepG2PTBP1
SAP30LENSG00000164576.7620.95070494.449800.328601.895001.38810HepG2PUF60
SAP30LENSG00000164576.7398.53740524.87270-0.397303.382702.74080HepG2PUM1
SAP30LENSG00000164576.7347.20360524.49400-0.595105.031704.14150HepG2PUM2
SAP30LENSG00000164576.7411.28790563.90500-0.455303.514002.82160HepG2QKI
SAP30LENSG00000164576.7556.47390443.096000.328602.195501.71950HepG2RBM22
SAP30LENSG00000164576.7446.44420337.373400.404002.240501.61680HepG2RPLP0
SAP30LENSG00000164576.7533.46420390.030500.451702.117001.41670HepG2RPS3A
SAP30LENSG00000164576.7140.24650228.02860-0.701302.647001.87590HepG2RRP9
SAP30LENSG00000164576.7499.47610281.621800.826602.861702.14390HepG2SF3B1
SAP30LENSG00000164576.7251.89750332.41050-0.400102.398601.79430HepG2SMN1
SAP30LENSG00000164576.7688.98880500.475700.461105.117204.49470HepG2SRFBP1
SAP30LENSG00000164576.7448.26290565.79950-0.335902.351901.90660HepG2SRSF1
SAP30LENSG00000164576.7436.08560307.705200.503004.082903.26340HepG2SRSF7
SAP30LENSG00000164576.7755.92350434.557700.798608.905308.08640HepG2SSB
SAP30LENSG00000164576.7332.95200555.21210-0.737709.091608.07510HepG2SUCLG1
SAP30LENSG00000164576.7430.75340297.390700.534402.850002.16400HepG2SUPV3L1
SAP30LENSG00000164576.7371.54240277.375900.421602.023201.39140HepG2TARDBP
SAP30LENSG00000164576.7342.34780467.30730-0.448903.075202.19940HepG2TIA1
SAP30LENSG00000164576.7413.89730311.023800.412102.393701.92270HepG2TIAL1
SAP30LENSG00000164576.7254.29460511.28640-1.007607.705106.28270HepG2UBE2L3
SAP30LENSG00000164576.7253.19730454.15080-0.842909.090508.10750HepG2UTP3
SAP30LENSG00000164576.7491.36970264.995100.8907011.5948010.37760HepG2ZC3H8
SAP30LENSG00000164576.7408.15710517.34760-0.342002.660102.12140HepG2ZNF622
SAP30LENSG00000164576.7254.99730375.38980-0.557903.268302.55640K562AKAP8L
SAP30LENSG00000164576.7713.46610443.549800.685605.077404.32500K562AQR
SAP30LENSG00000164576.7573.74140397.804800.528205.139204.28920K562DDX47
SAP30LENSG00000164576.7154.92580253.93420-0.712903.195701.81200K562EEF2
SAP30LENSG00000164576.7487.51310371.964000.390202.670701.96120K562EIF2S2
SAP30LENSG00000164576.7379.70210262.670800.531502.556501.56540K562EIF3D
SAP30LENSG00000164576.7747.14340547.947800.447204.266203.10760K562EIF4G2
SAP30LENSG00000164576.7450.64400264.779800.767105.901304.64340K562FMR1
SAP30LENSG00000164576.7352.38350224.428400.650803.668202.60210K562FTO
SAP30LENSG00000164576.7386.50670211.954000.866607.962107.00350K562FXR1
SAP30LENSG00000164576.7349.63030248.446000.492802.556701.79200K562GPKOW
SAP30LENSG00000164576.7387.09650219.608000.817706.287105.42240K562HNRNPC
SAP30LENSG00000164576.7334.35490212.151100.656203.032902.05090K562KRR1
SAP30LENSG00000164576.7332.65150242.512500.455902.326801.52650K562METAP2
SAP30LENSG00000164576.7383.20460264.931000.532402.700001.87840K562PCBP3
SAP30LENSG00000164576.7287.25260203.220000.499202.612101.83720K562POLR2G
SAP30LENSG00000164576.71342.73480597.850701.1672021.5183019.15000K562PUF60
SAP30LENSG00000164576.7873.91170635.920300.458504.220402.88300K562PUM1
SAP30LENSG00000164576.7780.31560623.063400.324602.451401.54630K562PUM2
SAP30LENSG00000164576.7250.53520372.27510-0.571403.184102.60850K562PUS1
SAP30LENSG00000164576.7261.97900158.948400.720802.535801.58250K562RPS3
SAP30LENSG00000164576.7370.83210236.293700.650103.514602.41570K562SF3B1
SAP30LENSG00000164576.7314.68620233.035200.433302.162501.52900K562SRSF1
SAP30LENSG00000164576.7321.84230235.862000.448302.169401.53780K562TARDBP
SAP30LENSG00000164576.7486.66090289.413500.749705.115103.48170K562UTP3
SAP30LENSG00000164576.7421.61960322.050300.388602.726101.88550K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SAP30L is not available on ENCORE database.





13 RBPs can affect the splicing of SAP30L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.282000.000000.00016includedK562SRSF1
SESAP30LENSG00000164576.7chr5+1538320151538320551538306501538307731538329611538330600.103000.000090.07794includedK562TROVE2
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.095000.000070.02939includedK562PUM1
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.162000.000010.00100includedHepG2AKAP1
SESAP30LENSG00000164576.7chr5+153832015153832059153830650153830773153832961153833045-0.084000.000280.07150excludedK562PPIL4
SESAP30LENSG00000164576.7chr5+1538320151538320551538306501538307731538329611538330600.081000.005810.09864includedHepG2SRSF1
SESAP30LENSG00000164576.7chr5+153832015153832055153830650153830773153832961153833060-0.171000.000130.03513excludedK562FXR2
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.123000.000160.01743includedHepG2IGF2BP3
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.084000.000780.05463includedK562HNRNPUL1
SESAP30LENSG00000164576.7chr5+153832015153832055153830650153830773153832961153833060-0.172000.000120.07243excludedK562HLTF
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.163000.000020.01178includedHepG2NOL12
SESAP30LENSG00000164576.7chr5+153832015153832059153830650153830773153832961153833045-0.114000.001900.06162excludedK562HNRNPU
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.227000.000740.03570includedK562HNRNPK
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.223000.000050.00322includedHepG2HNRNPC
SESAP30LENSG00000164576.7chr5+1538320151538320591538306501538307731538329611538330450.232000.000000.00000includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SAP30L is not avaliable on ENCORE database.