MSN

General Information

Gene Name       : MSN
Gene ID             : ENSG00000147065.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MSN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MSNENSG00000147065.16282.34294.24288.29ENCSR000AEF
HepG2MSNENSG00000147065.160.040.020.03ENCSR985KAT
K562MSNENSG00000147065.16324.82326.87325.85ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MSN is not avaliable on ENCORE database.



Proteins bound to RNA
  • MSN RNA is bound by 34 proteins.  







eCLIP assay for MSN is not avaliable on ENCORE database.





34 proteins are bound to MSN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX6496025364960279+3'-UTR3.5406917.28172K562UPF1
chrX6496174864961766+3'-UTR3.8724013.39546K562NOLC1
chrX6495978664959832+3'-UTR3.0571426.69897K562PABPC4
chrX6496042564960558+3'-UTR3.7432649.10357K562UPF1
chrX6496030564960373+3'-UTR3.5263248.45791K562FAM120A
chrX6496051864960544+3'-UTR3.193405.90347K562IGF2BP1
chrX6496091164960987+3'-UTR3.7208219.53324K562IGF2BP2
chrX6496023964960275+3'-UTR3.8666026.89235K562FAM120A
chrX6496115264961221+3'-UTR3.7439910.12426K562IGF2BP1
chrX6496017364960239+3'-UTR3.8388634.50569K562FAM120A
chrX6496158264961616+3'-UTR5.6477638.73499HepG2SUB1
chrX6496003864960098+3'-UTR3.2812211.37961K562IGF2BP1
chrX6496150864961543+3'-UTR3.8226326.75890K562IGF2BP2
chrX6496072964960816+3'-UTR3.3242836.97175K562FAM120A
chrX6496070364960810+3'-UTR3.9589480.74441K562UPF1
chrX6496044164960483+3'-UTR3.8453020.90654K562YBX3
chrX6496090264960970+3'-UTR5.8997717.17703K562PCBP1
chrX6496155664961608+3'-UTR3.9449913.63516K562PABPC4
chrX6493667964936742+3'-UTR,CDS,intron-Proximal4.8664014.03781K562METAP2
chrX6496043264960441+3'-UTR3.7209011.05259K562YBX3
chrX6496157064961582+3'-UTR6.7091047.65358HepG2SUB1
chrX6496032164960348+3'-UTR3.322584.25794K562HNRNPK
chrX6496081664960898+3'-UTR3.3888622.89650K562FAM120A
chrX6496124764961290+3'-UTR4.1153515.58337K562IGF2BP2
chrX6496120464961274+3'-UTR4.1637113.12642K562LIN28B
chrX6496173164961778+3'-UTR3.904839.98046K562TIA1
chrX6496090364960994+3'-UTR3.2654633.72744K562UPF1
chrX6495997864960041+3'-UTR3.8678436.25385K562UPF1
chrX6496124064961268+3'-UTR3.3554913.24014K562UPF1
chrX6496170364961722+3'-UTR4.5439913.72294HepG2SUB1
chrX6493667864936682+3'-UTR,CDS,intron-Proximal5.3031334.29781K562YBX3
chrX6496062264960703+3'-UTR3.3600549.11646K562UPF1
chrX6496175164961772+3'-UTR7.4143450.57193HepG2SUB1
chrX6496168264961721+3'-UTR4.5002717.41565K562NOLC1
chrX6496172464961743+3'-UTR3.9176925.56498K562UPF1
chrX6496006964960111+3'-UTR3.6877311.21230K562PCBP1
chrX6496104264961110+3'-UTR4.1716917.73440K562PCBP1
chrX6496122264961293+3'-UTR5.7439725.75170K562IGF2BP1
chrX6496004664960150+3'-UTR3.4642640.60495K562FAM120A
chrX6495983264959872+3'-UTR3.0683617.80635K562PABPC4
chrX6496058064960622+3'-UTR3.3208939.71763K562UPF1
chrX6496081064960869+3'-UTR3.5371232.00141K562UPF1
chrX6493669064936715+3'-UTR,CDS4.8655573.25980K562YBX3
chrX6496033864960366+3'-UTR3.8824132.25573K562UPF1
chrX6496031664960357+3'-UTR3.486067.76153K562NOLC1
chrX6496055864960580+3'-UTR3.1523424.51998K562UPF1
chrX6496131264961366+3'-UTR4.5509511.89747K562IGF2BP1
chrX6496140664961456+3'-UTR3.5847426.77900HepG2SUB1
chrX6496172264961751+3'-UTR6.1337259.90535HepG2SUB1
chrX6496171964961781+3'-UTR3.376646.84558K562ZC3H11A
chrX6495997564960023+3'-UTR3.507789.36215K562PCBP1
chrX6496147364961508+3'-UTR3.3517726.33537K562IGF2BP2
chrX6495976364959850+3'-UTR3.2775524.44418K562PCBP1
chrX6493668264936690+3'-UTR,CDS4.9107647.98351K562YBX3
chrX6495987664959914+3'-UTR3.398738.94344HepG2SUB1
chrX6496153364961570+3'-UTR5.9670447.73691HepG2SUB1
chrX6496174364961770+3'-UTR3.6772423.94089K562UPF1
chrX6496010064960137+3'-UTR4.5127010.58399HepG2SUB1
chrX6495979464959826+3'-UTR3.5721610.87680HepG2SUB1
chrX6496172164961748+3'-UTR4.4682022.31026K562NOLC1
chrX6496153264961600+3'-UTR3.8358114.06180K562NOLC1
chrX6496031664960338+3'-UTR3.3506226.08674K562UPF1
chrX6496156064961567+3'-UTR3.185953.31456K562TIA1
chrX6488769264887716+5'-UTR,CDS,intron-Distal4.7195926.66494K562YBX3
chrX6488766264887692+5'-UTR,intron-Distal3.6948123.66651K562YBX3
chrX6495883264958837+CDS4.3598510.73371K562ZNF622
chrX6494945064949503+CDS6.1866816.79949K562RPS3
chrX6495838764958405+CDS3.261057.63975K562PUM1
chrX6495665964956672+CDS3.3981210.05284K562ZNF622
chrX6494945064949497+CDS4.3544710.02532K562FXR2
chrX6495847864958485+CDS,intron-Proximal3.3063010.15932K562AQR
chrX6495673064956751+CDS4.4368432.77258K562ZNF622
chrX6495708464957109+CDS5.3685937.31412K562ZNF622
chrX6495676664956787+CDS3.1185134.36900K562ZNF800
chrX6495512864955155+CDS,intron-Proximal3.303598.14458K562GRWD1
chrX6495715064957193+CDS3.7058416.05933K562GRWD1
chrX6495304564953051+CDS,intron-Proximal3.416245.33133K562BUD13
chrX6495847364958479+CDS3.926089.56042K562ZNF622
chrX6494937364949391+CDS4.081838.35235K562RPS3
chrX6495670964956730+CDS4.1468325.80346K562ZNF622
chrX6495512964955188+CDS3.8302925.99051K562UCHL5
chrX6495665764956765+CDS3.304825.36558K562SRSF7
chrX6495883264958842+CDS3.4281011.99332K562UCHL5
chrX6495169964951716+CDS,intron-Proximal5.7025413.14174K562RPS3
chrX6495703964957084+CDS,intron-Proximal4.8275237.58828K562ZNF622
chrX6494935764949430+CDS4.037168.65309K562SND1
chrX6495517664955221+CDS4.305966.58618K562FXR2
chrX6495513264955142+CDS3.2378510.65712K562YBX3
chrX6495718464957199+CDS3.269459.26029K562ZNF800
chrX6495703964957043+CDS,intron-Proximal4.0828027.48037K562UCHL5
chrX6495713764957184+CDS3.0319821.97290K562ZNF800
chrX6493675664936761+CDS3.366549.43411K562YBX3
chrX6495677064956787+CDS4.6072742.18065K562UCHL5
chrX6495703964957070+CDS,intron-Proximal3.568425.40162K562TRA2A
chrX6495517064955216+CDS4.315376.22473K562FMR1
chrX6495845564958477+CDS4.843114.08330K562FXR2
chrX6495897064959027+CDS3.4590122.75208K562UCHL5
chrX6495666264956766+CDS3.0165449.69786K562ZNF800
chrX6495708464957133+CDS5.0681057.14335K562UCHL5
chrX6495713364957177+CDS4.3815528.91876K562UCHL5
chrX6495959164959622+CDS3.3727713.78760K562ZNF800
chrX6495665664956676+CDS,intron-Proximal3.182673.34822K562RBM15
chrX6495902764959048+CDS3.0267515.24686K562UCHL5
chrX6495840564958420+CDS3.203667.32462K562PUM1
chrX6493671564936729+CDS4.7235457.22979K562YBX3
chrX6495676464956788+CDS,intron-Proximal3.3782826.97416K562PUM1
chrX6495707064957084+CDS4.9022144.75043K562UCHL5
chrX6495704364957056+CDS4.2638035.67724K562UCHL5
chrX6495710964957133+CDS4.5948324.81076K562ZNF622
chrX6494945764949484+CDS4.419183.81597K562RBM15
chrX6495670564956732+CDS3.310185.04570K562TRA2A
chrX6495842064958479+CDS3.2441318.65335K562PUM1
chrX6495673264956787+CDS3.461895.78893K562TRA2A
chrX6488771664887720+CDS,intron-Distal3.457889.86022K562YBX3
chrX6494954664949574+CDS4.335319.67356K562RPS3
chrX6495838664958406+CDS,intron-Proximal3.191498.18166K562ZNF800
chrX6495902764959056+CDS3.1260212.03943K562ZNF800
chrX6495886064958898+CDS3.7096815.90392K562ZNF622
chrX6495104164951052+CDS5.4084910.96987K562RPS3
chrX6495512864955132+CDS,intron-Proximal3.052837.50689K562YBX3
chrX6495703964957046+CDS,intron-Proximal3.5830920.49648K562PUM1
chrX6495713064957150+CDS3.8048012.09342K562GRWD1
chrX6495706864957083+CDS3.0004117.91689K562GRWD1
chrX6495962264959698+CDS3.1538917.01309K562ZNF800
chrX6495670964956756+CDS5.9247157.95813K562UCHL5
chrX6495840864958437+CDS3.6924415.68300K562UCHL5
chrX6495845264958473+CDS4.3773513.83885K562ZNF622
chrX6494945064949503+CDS5.1772115.10078K562SND1
chrX6495673264956764+CDS3.2886225.06470K562PUM1
chrX6493672964936743+CDS4.4854129.81468K562YBX3
chrX6495705664957070+CDS4.6869143.06004K562UCHL5
chrX6495675664956770+CDS4.9988437.10574K562UCHL5
chrX6495886164958912+CDS4.4299425.31555K562UCHL5
chrX6495704664957076+CDS3.5341029.81406K562PUM1
chrX6495528164955292+CDS3.397953.56099K562TRA2A
chrX6495839364958434+CDS3.231549.40533K562GRWD1
chrX6494944964949496+CDS4.3153712.59500K562FMR1
chrX6495703864957076+CDS,intron-Proximal3.3309241.18362K562ZNF800
chrX6495177364951829+CDS3.6300116.05505K562RPS3
chrX6494953764949575+CDS,intron-Proximal3.261365.38208K562FXR2
chrX6495675164956787+CDS4.9955634.85032K562ZNF622
chrX6495843464958479+CDS3.4044512.57164K562GRWD1
chrX6495883164958849+CDS,intron-Proximal3.182847.17132K562GRWD1
chrX6495665964956709+CDS4.5723930.57558K562UCHL5
chrX6495842364958473+CDS4.200084.35343K562SRSF1
chrX6495844064958479+CDS4.1221521.58534K562UCHL5
chrX6495099164951030+CDS4.104986.41381K562METAP2
chrX6490538464905413+intron-Distal5.7275310.83497K562TROVE2
chrX6490578264905800+intron-Distal6.4221232.28230K562TROVE2
chrX6490537564905384+intron-Distal6.7275311.84464K562TROVE2
chrX6490574664905772+intron-Distal7.2163133.54377K562TROVE2
chrX6488772064887757+intron-Distal,intron-Proximal5.162636.83960K562AQR
chrX6491493064915080+intron-Distal3.533667.20520K562EIF4G2
chrX6494528064945346+intron-Distal4.582343.92866K562PTBP1
chrX6491494664915059+intron-Distal4.054683.91772K562TARDBP
chrX6490577264905782+intron-Distal7.2163133.54377K562TROVE2
chrX6490574864905793+intron-Distal5.188307.00899HepG2TROVE2
chrX6488787364887945+intron-Distal3.009825.14410K562AKAP8L
chrX6494640164946552+intron-Distal4.165883.46495K562TARDBP
chrX6495105564951094+intron-Proximal5.082405.65342K562AQR
chrX6495848564958522+intron-Proximal6.5208419.16919K562AQR
chrX6493676664936803+intron-Proximal4.842335.26064K562AQR
chrX6495314264953166+intron-Proximal4.9921110.24966K562AQR
chrX6495680864956840+intron-Proximal4.278566.77156K562AQR
chrX6495880864958825+intron-Proximal4.162634.89208K562AQR
chrX6495316664953184+intron-Proximal5.9598410.04245K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MSN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MSN is not available on ENCORE database.

  • 104 RBPs can affect the levels of MSN.  








The Knockdown/knockout RNA-Seq assay for MSN is not available on ENCORE database.





104 RBPs can affect the gene expression of MSN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MSNENSG00000147065.124.8080024.67540-2.359603.154302.09280HepG2ADAR
MSNENSG00000147065.1264.5208011.389202.502006.578003.77850HepG2APOBEC3C
MSNENSG00000147065.129.3684039.08370-2.060704.230903.41390HepG2AUH
MSNENSG00000147065.1225.0539068.22870-1.445303.591602.46560HepG2CCAR1
MSNENSG00000147065.12137.9371044.927101.618303.285002.54200HepG2CPSF6
MSNENSG00000147065.125.8731025.30540-2.107202.904201.86070HepG2YBX3
MSNENSG00000147065.1279.3429023.642801.746604.309003.36700HepG2DDX55
MSNENSG00000147065.122.6208051.01760-4.282909.659207.91090HepG2DDX59
MSNENSG00000147065.1220.226803.122502.695402.530801.87170HepG2EIF4B
MSNENSG00000147065.129.6516035.51930-1.879803.182102.29700HepG2EIF4G1
MSNENSG00000147065.12113.4564029.160501.960006.695705.55300HepG2FIP1L1
MSNENSG00000147065.128.0931045.00120-2.475203.678602.50090HepG2FTO
MSNENSG00000147065.1250.722103.233903.971209.555508.34060HepG2FXR1
MSNENSG00000147065.1216.495103.002802.457602.284201.67620HepG2G3BP1
MSNENSG00000147065.1269.8495023.674501.560804.276603.00480HepG2GNB2L1
MSNENSG00000147065.122.5975050.93230-4.293409.784808.63150HepG2GPKOW
MSNENSG00000147065.1227.7924060.88580-1.131402.586401.89210HepG2HNRNPF
MSNENSG00000147065.1211.4490032.78930-1.518002.263501.64560HepG2HNRNPL
MSNENSG00000147065.1214.6038048.60530-1.734803.386602.69780HepG2HNRNPLL
MSNENSG00000147065.1217.4254059.95660-1.782704.792803.86460HepG2IGF2BP1
MSNENSG00000147065.1226.896502.861203.232602.990801.96970HepG2IGF2BP3
MSNENSG00000147065.1238.1328072.03240-0.917602.175301.44690HepG2LARP4
MSNENSG00000147065.1210.8139043.09500-1.994603.590402.73810HepG2NSUN2
MSNENSG00000147065.126.9335024.72130-1.834102.484301.78180HepG2PPIL4
MSNENSG00000147065.1211.2008033.36350-1.574702.682401.91870HepG2PRPF4
MSNENSG00000147065.12112.046704.344304.6887025.6252024.28270HepG2PTBP1
MSNENSG00000147065.1214.1342036.17550-1.355802.191901.65150HepG2PUM1
MSNENSG00000147065.1211.7458036.14780-1.621802.607301.95540HepG2PUM2
MSNENSG00000147065.12137.6150017.921102.9408014.0746012.59580HepG2RAVER1
MSNENSG00000147065.121220.1249037.502605.0238014.3214013.32930HepG2RBM22
MSNENSG00000147065.1279.646104.835604.0417014.4161013.36280HepG2NELFE
MSNENSG00000147065.1220.566804.502202.191502.249601.68720HepG2RECQL
MSNENSG00000147065.12106.7309065.567600.702802.252901.62740HepG2RPLP0
MSNENSG00000147065.121.0988017.61900-4.003103.832302.72020HepG2RPS10
MSNENSG00000147065.1258.5273015.374301.928504.914004.12130HepG2RPS19
MSNENSG00000147065.124.2324048.11180-3.506807.790306.66020HepG2SF3B1
MSNENSG00000147065.1220.783704.524802.199402.273901.73100HepG2SF3B4
MSNENSG00000147065.123.7261032.67790-3.132605.362204.43990HepG2SLBP
MSNENSG00000147065.1276.5185028.782701.410504.595103.80170HepG2SMN1
MSNENSG00000147065.12149.1230042.359701.815603.728903.17390HepG2SRFBP1
MSNENSG00000147065.123.1843022.51990-2.822203.229301.46790HepG2SRP68
MSNENSG00000147065.1234.942204.722102.887404.766704.18870HepG2SRSF1
MSNENSG00000147065.12410.6920051.762102.988003.348002.23660HepG2SRSF3
MSNENSG00000147065.124.2877036.78150-3.100706.201405.49000HepG2SSB
MSNENSG00000147065.120.0000013.90500-99999.999994.127703.20020HepG2UCHL5
MSNENSG00000147065.1231.8912010.328801.626402.360101.79730HepG2UTP3
MSNENSG00000147065.124.3863023.16980-2.401202.657901.94790HepG2XRN2
MSNENSG00000147065.1229.0926011.766101.305901.877201.40280HepG2ZNF622
MSNENSG00000147065.1223774.9699028926.62880-0.283002.701101.49720K562ABCF1
MSNENSG00000147065.1227136.7971023878.846400.184403.191302.58930K562AGGF1
MSNENSG00000147065.1212487.2903021628.75230-0.7925017.3288016.02390K562AQR
MSNENSG00000147065.129795.6583012062.18170-0.300307.182705.60940K562BCLAF1
MSNENSG00000147065.1212914.1860021837.94330-0.757904.289203.19520K562BOP1
MSNENSG00000147065.1220812.5553030020.60610-0.528503.284502.11040K562CNOT7
MSNENSG00000147065.1221854.5823026334.97750-0.269005.101303.56290K562CPEB4
MSNENSG00000147065.1215833.4448023221.07270-0.552504.466603.47150K562CPSF6
MSNENSG00000147065.129445.0115013340.04110-0.498104.310001.99960K562YBX3
MSNENSG00000147065.128020.101409150.96300-0.190302.376401.40620K562CSTF2
MSNENSG00000147065.1224754.9042035973.65820-0.5392012.7932010.78200K562CELF1
MSNENSG00000147065.1213447.0800016776.17830-0.319106.609804.69740K562DDX21
MSNENSG00000147065.129241.0411010575.95500-0.194702.764501.44430K562DDX27
MSNENSG00000147065.1215285.9948027251.93990-0.8341044.9895042.67330K562DDX47
MSNENSG00000147065.129719.9747013133.52990-0.434205.366103.48640K562DNAJC21
MSNENSG00000147065.1218810.2503016646.910000.176202.154201.50610K562EIF2S2
MSNENSG00000147065.128869.9279012423.13670-0.486002.966101.92160K562EIF3A
MSNENSG00000147065.128956.7724012246.50350-0.451303.804702.57250K562EIF3D
MSNENSG00000147065.128261.339809836.14450-0.251703.733702.81900K562EIF3G
MSNENSG00000147065.1218428.9241029257.81100-0.6668024.9542022.40200K562EIF4G2
MSNENSG00000147065.1216127.6809022106.47350-0.454903.757401.81630K562ESF1
MSNENSG00000147065.1216710.2663023624.81270-0.499602.740501.89100K562FMR1
MSNENSG00000147065.1212789.2598020023.25760-0.646705.405804.08230K562FTO
MSNENSG00000147065.1214041.5241011574.706800.278603.743401.62670K562FUBP3
MSNENSG00000147065.1216098.9126020825.08580-0.371407.154405.37760K562GLRX3
MSNENSG00000147065.1215169.2717022171.26830-0.547504.106703.14410K562GPKOW
MSNENSG00000147065.1213907.1142022182.63710-0.6736010.376608.88810K562GRSF1
MSNENSG00000147065.1211752.9265017719.00550-0.5923012.1860010.17170K562HNRNPA1
MSNENSG00000147065.128975.9877015644.86730-0.8015012.2731011.09010K562HNRNPC
MSNENSG00000147065.129863.1983019623.19510-0.9924044.1506041.05680K562HNRNPU
MSNENSG00000147065.1223997.7014028190.70860-0.232302.002901.32110K562HSPD1
MSNENSG00000147065.129082.1644012759.91420-0.490505.431703.34590K562ILF3
MSNENSG00000147065.129606.4356012331.70420-0.360303.359001.71670K562KHDRBS1
MSNENSG00000147065.1214174.0860018929.24750-0.417402.446501.57480K562KRR1
MSNENSG00000147065.1218336.6479015144.147000.275902.762401.37530K562LARP7
MSNENSG00000147065.1235888.7983029539.851400.280803.102202.13000K562MBNL1
MSNENSG00000147065.1213044.2111021641.26950-0.730404.806103.63090K562METAP2
MSNENSG00000147065.1223890.7175031186.07950-0.384504.460803.02310K562MSI2
MSNENSG00000147065.1214072.2114021894.91040-0.6377031.4937029.26720K562MTPAP
MSNENSG00000147065.1229013.3244020705.293500.486604.114802.98100K562NAA15
MSNENSG00000147065.1218051.3801024326.94030-0.4304027.9639025.99210K562NSUN2
MSNENSG00000147065.1211314.8593013430.94220-0.247302.332301.43850K562PCBP2
MSNENSG00000147065.1214891.4381024524.38450-0.7197010.961309.31080K562PCBP3
MSNENSG00000147065.1223659.2442030063.24030-0.345604.071502.36120K562PNPT1
MSNENSG00000147065.1211660.7592018810.75860-0.6899018.2266016.27630K562POLR2G
MSNENSG00000147065.1218871.7843023602.08480-0.322703.140902.25950K562PPIG
MSNENSG00000147065.1211200.1549014026.71200-0.324702.927801.99220K562PSIP1
MSNENSG00000147065.1225652.9868031922.61200-0.315503.637102.70370K562PUF60
MSNENSG00000147065.1225239.9996033953.77280-0.427908.097506.19420K562PUM1
MSNENSG00000147065.1223970.8150033268.92790-0.4729012.8749010.81820K562PUM2
MSNENSG00000147065.1234241.8548024641.491300.474603.008702.44640K562PUS1
MSNENSG00000147065.1228716.1970024009.360400.258203.886703.20060K562RBM15
MSNENSG00000147065.126985.7760011337.60970-0.698609.224807.71530K562RPS19
MSNENSG00000147065.128507.8171011380.39680-0.419702.951601.57790K562RRP9
MSNENSG00000147065.1220255.9465024004.88550-0.245004.011803.03810K562SF3A3
MSNENSG00000147065.1214161.4510010905.117100.376903.287302.35420K562SF3B4
MSNENSG00000147065.129581.6471013452.13020-0.489506.449704.51400K562SLBP
MSNENSG00000147065.1211624.4408014379.86100-0.306903.679402.86960K562SRSF1
MSNENSG00000147065.1213151.1278014971.35560-0.187002.476001.37210K562SRSF7
MSNENSG00000147065.1216650.5995026762.66900-0.684603.720101.81060K562STIP1
MSNENSG00000147065.1218819.6480027852.86390-0.5656014.0849011.22990K562SUCLG1
MSNENSG00000147065.129539.5463013491.67260-0.500105.710404.31580K562TIAL1
MSNENSG00000147065.1218995.6221024326.57030-0.356903.650802.00250K562TRIP6
MSNENSG00000147065.129154.2534011405.78560-0.317302.798701.77390K562UCHL5
MSNENSG00000147065.1218767.9217025794.39210-0.4588016.8994015.29110K562UPF1
MSNENSG00000147065.1220766.4564028656.91680-0.464604.973303.36380K562UTP3
MSNENSG00000147065.1215692.1820022071.41160-0.492108.666607.07990K562WDR3
MSNENSG00000147065.1215532.2654022951.94810-0.5633027.0904024.88830K562WDR43
MSNENSG00000147065.129466.5467011614.60420-0.295002.436601.32670K562XRN2
MSNENSG00000147065.1215171.7769024364.35740-0.6834013.5554011.49880K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MSN is not available on ENCORE database.





5 RBPs can affect the splicing of MSN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXEMSNENSG00000147065.12chrX+64936679649367636494767564947771648875366488772064949299649495740.110000.003780.084591includedK562XRN2
MXEMSNENSG00000147065.12chrX+64936679649367636494767564947771648875366488772064949299649495740.107000.000150.009271includedK562SBDS
MXEMSNENSG00000147065.12chrX+64936679649367636494767564947771648875366488772064949299649495740.111000.000100.008121includedK562TIA1
MXEMSNENSG00000147065.12chrX+64936679649367636494767564947771648875366488772064949299649495740.089000.001220.023221includedK562SF3B4
MXEMSNENSG00000147065.12chrX+64936679649367636494767564947771648875366488772064949299649495740.138000.007630.080971includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MSN is not avaliable on ENCORE database.