C1orf112

General Information

Gene Name : C1orf112
Gene ID : ENSG00000000460.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: C1orf112)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	C1orf112	ENSG00000000460.16	24.72	19.23	21.98	ENCSR000AEF
HepG2	C1orf112	ENSG00000000460.16	10.19	17.47	13.83	ENCSR985KAT
K562	C1orf112	ENSG00000000460.16	28.33	30.39	29.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for C1orf112 is not avaliable on ENCORE database.

Proteins bound to RNA

C1orf112 RNA is bound by 7 proteins.

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eCLIP assay for C1orf112 is not avaliable on ENCORE database.

7 proteins are bound to C1orf112 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	169810077	169810119	+	intron-Distal	5.04221	8.03988	K562	EXOSC5
chr1	169809136	169809216	+	intron-Distal	4.06845	7.31365	K562	EXOSC5
chr1	169801647	169801693	+	intron-Proximal	5.07707	6.44303	K562	AQR
chr1	169805900	169806006	+	intron-Distal,intron-Proximal	4.57052	6.09994	K562	KHSRP
chr1	169809041	169809084	+	intron-Distal	4.54221	5.12361	K562	EXOSC5
chr1	169799883	169799967	+	CDS,intron-Proximal	4.94234	4.86944	K562	AQR
chr1	169818515	169818663	+	CDS,intron-Distal,intron-Proximal	4.32965	4.76003	K562	KHSRP
chr1	169778351	169778465	+	intron-Distal	4.44140	4.51355	HepG2	PTBP1
chr1	169808195	169808236	+	intron-Distal	4.34605	4.48560	K562	EXOSC5
chr1	169778353	169778400	+	intron-Distal	3.83032	4.22415	K562	PTBP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 23 entries

eCLIP assay for C1orf112 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for C1orf112 is not available on ENCORE database.
137 RBPs can affect the levels of C1orf112.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for C1orf112 is not available on ENCORE database.

137 RBPs can affect the gene expression of C1orf112 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
C1orf112	ENSG00000000460.12	92.61420	348.98000	-1.91380	30.12830	28.82030	HepG2	ZNF622
C1orf112	ENSG00000000460.12	210.10120	535.01320	-1.34850	22.60220	21.52960	HepG2	SRFBP1
C1orf112	ENSG00000000460.12	91.55660	380.50860	-2.05520	21.53130	19.96460	HepG2	SUPV3L1
C1orf112	ENSG00000000460.12	134.57300	361.91500	-1.42730	19.91290	18.49060	HepG2	CKAP4
C1orf112	ENSG00000000460.12	52.54430	254.09120	-2.27370	19.69940	18.21720	HepG2	EIF2S1
C1orf112	ENSG00000000460.12	93.27780	323.63800	-1.79480	19.28810	17.81280	HepG2	RPLP0
C1orf112	ENSG00000000460.12	90.54870	353.70960	-1.96580	18.33740	17.25890	HepG2	TIAL1
C1orf112	ENSG00000000460.12	209.91480	540.07340	-1.36340	18.52820	17.16630	HepG2	PUF60
C1orf112	ENSG00000000460.12	71.85560	291.72230	-2.02140	17.43910	15.77940	HepG2	RRP9
C1orf112	ENSG00000000460.12	237.71240	530.61720	-1.15850	17.06510	15.73940	HepG2	CELF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 164 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for C1orf112 is not available on ENCORE database.

7 RBPs can affect the splicing of C1orf112 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	C1orf112	ENSG00000000460.12	chr1	+	169770023	169770112			169767997	169768099	169771761	169771866	-0.24000	0.00000	0.00002	excluded	K562	AQR
SE	C1orf112	ENSG00000000460.12	chr1	+	169801557	169801647			169799836	169799888	169806067	169806253	-0.12700	0.00000	0.00000	excluded	K562	AQR
SE	C1orf112	ENSG00000000460.12	chr1	+	169792548	169792613			169790819	169790900	169796191	169796340	-0.13500	0.00000	0.00000	excluded	K562	AQR
SE	C1orf112	ENSG00000000460.12	chr1	+	169792548	169792613			169790819	169790900	169796191	169796340	-0.28400	0.00000	0.00004	excluded	K562	U2AF1
MXE	C1orf112	ENSG00000000460.12	chr1	+	169818625	169818745	169819405	169819486	169816830	169816944	169820957	169821077	0.08800	0.00000	0.00006	1included	K562	AQR
MXE	C1orf112	ENSG00000000460.12	chr1	+	169792548	169792613	169796191	169796340	169790819	169790900	169798403	169798955	-0.20400	0.00000	0.00000	2included	K562	AQR
A3SS	C1orf112	ENSG00000000460.12	chr1	+	169818625	169818745			169818640	169818745	169816830	169816944	0.13100	0.00002	0.00016	longer	K562	AQR
MXE	C1orf112	ENSG00000000460.12	chr1	+	169792548	169792613	169796191	169796340	169790819	169790900	169798403	169798955	-0.22300	0.00004	0.00156	2included	K562	U2AF1
A3SS	C1orf112	ENSG00000000460.12	chr1	+	169792532	169792613			169792548	169792613	169790819	169790900	0.07400	0.00006	0.00057	longer	K562	AQR
MXE	C1orf112	ENSG00000000460.12	chr1	+	169792548	169792613	169796147	169796340	169790819	169790900	169798403	169798955	-0.10700	0.00006	0.00075	2included	K562	AQR

Showing 1 to 10 of 19 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

C1orf112

General Information

Functions

Localization

Domains (AlphaFold: C1orf112)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for C1orf112 is not avaliable on ENCORE database.

7 proteins are bound to C1orf112 RNA:

eCLIP assay for C1orf112 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for C1orf112 is not available on ENCORE database.

137 RBPs can affect the gene expression of C1orf112 :

The Knockdown/knockout RNA-Seq assay for C1orf112 is not available on ENCORE database.

7 RBPs can affect the splicing of C1orf112 :

The Knockdown/knockout RNA-Seq assay for C1orf112 is not avaliable on ENCORE database.