RHBDD2

General Information

Gene Name : RHBDD2
Gene ID : ENSG00000005486.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RHBDD2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RHBDD2	ENSG00000005486.16	4.42	8.90	6.66	ENCSR000AEF
HepG2	RHBDD2	ENSG00000005486.16	26.55	11.68	19.12	ENCSR985KAT
K562	RHBDD2	ENSG00000005486.16	32.89	16.01	24.45	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RHBDD2 is not avaliable on ENCORE database.

Proteins bound to RNA

RHBDD2 RNA is bound by 12 proteins.

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eCLIP assay for RHBDD2 is not avaliable on ENCORE database.

12 proteins are bound to RHBDD2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	75508422	75508477	+	5'-UTR,CDS,intron-Distal	5.12892	29.72166	HepG2	DDX3X
chr7	75508355	75508422	+	5'-UTR,CDS,intron-Distal	4.51228	21.94029	HepG2	DDX3X
chr7	75518004	75518101	+	3'-UTR	5.42879	20.69485	HepG2	UPF1
chr7	75518116	75518226	+	3'-UTR	4.56583	20.07592	K562	UPF1
chr7	75518101	75518181	+	3'-UTR	6.17570	19.62541	HepG2	UPF1
chr7	75518162	75518234	+	3'-UTR	5.39423	18.64574	K562	PUM2
chr7	75518004	75518107	+	3'-UTR	4.62832	18.30956	HepG2	AKAP1
chr7	75518028	75518103	+	3'-UTR	6.25182	16.89355	K562	UPF1
chr7	75508483	75508557	+	5'-UTR,CDS,intron-Distal	5.19908	15.31047	HepG2	DDX3X
chr7	75518107	75518179	+	3'-UTR	5.52501	11.68490	HepG2	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 31 entries

eCLIP assay for RHBDD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RHBDD2 is not available on ENCORE database.
134 RBPs can affect the levels of RHBDD2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.

134 RBPs can affect the gene expression of RHBDD2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RHBDD2	ENSG00000005486.12	1467.87730	494.02090	1.57100	61.14490	58.74600	HepG2	SRSF5
RHBDD2	ENSG00000005486.12	1634.19870	469.40500	1.79960	50.28100	48.35590	HepG2	BOP1
RHBDD2	ENSG00000005486.12	1162.65170	444.73220	1.38630	38.65180	36.58110	K562	EIF2S2
RHBDD2	ENSG00000005486.12	1188.72060	531.14520	1.16210	38.22430	36.53870	HepG2	PUM1
RHBDD2	ENSG00000005486.12	1246.63490	574.16570	1.11840	35.86500	34.09260	HepG2	CKAP4
RHBDD2	ENSG00000005486.12	860.25900	337.63080	1.34920	35.13120	33.40600	HepG2	TRIM56
RHBDD2	ENSG00000005486.12	1405.29180	676.77050	1.05400	32.88490	31.03480	HepG2	UPF1
RHBDD2	ENSG00000005486.12	2585.66000	936.71850	1.46470	31.98500	30.11340	HepG2	DDX3X
RHBDD2	ENSG00000005486.12	755.11880	308.71020	1.29040	26.52120	24.59300	HepG2	DNAJC21
RHBDD2	ENSG00000005486.12	801.32350	344.38820	1.21820	25.48380	23.79680	HepG2	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 158 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.

12 RBPs can affect the splicing of RHBDD2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.21000	0.00000	0.00000	excluded	K562	AKAP8L
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.50400	0.00000	0.00000	excluded	HepG2	U2AF2
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.17000	0.00000	0.00009	excluded	HepG2	AKAP1
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	0.41900	0.00000	0.00002	included	K562	FXR1
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.18200	0.00000	0.00001	excluded	K562	AGGF1
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	0.31500	0.00001	0.00060	included	HepG2	HNRNPK
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.14500	0.00004	0.03000	excluded	HepG2	UPF1
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.41700	0.00004	0.01248	excluded	HepG2	HNRNPUL1
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.14100	0.00009	0.00504	excluded	K562	UTP18
SE	RHBDD2	ENSG00000005486.12	chr7	+	75510682	75510804	75508489	75508578	75511146	75511554	-0.18300	0.00012	0.01294	excluded	HepG2	FTO

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RHBDD2

General Information

Functions

Localization

Domains (AlphaFold: RHBDD2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RHBDD2 is not avaliable on ENCORE database.

12 proteins are bound to RHBDD2 RNA:

eCLIP assay for RHBDD2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.

134 RBPs can affect the gene expression of RHBDD2 :

The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.

12 RBPs can affect the splicing of RHBDD2 :

The Knockdown/knockout RNA-Seq assay for RHBDD2 is not avaliable on ENCORE database.