RHBDD2

General Information

Gene Name       : RHBDD2
Gene ID             : ENSG00000005486.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RHBDD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RHBDD2ENSG00000005486.164.428.906.66ENCSR000AEF
HepG2RHBDD2ENSG00000005486.1626.5511.6819.12ENCSR985KAT
K562RHBDD2ENSG00000005486.1632.8916.0124.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RHBDD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RHBDD2 RNA is bound by 12 proteins.  







eCLIP assay for RHBDD2 is not avaliable on ENCORE database.





12 proteins are bound to RHBDD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr77551802875518103+3'-UTR6.2518216.89355K562UPF1
chr77551800475518101+3'-UTR5.4287920.69485HepG2UPF1
chr77551752475517586+3'-UTR,CDS3.310803.02556K562IGF2BP2
chr77551810775518179+3'-UTR5.5250111.68490HepG2AKAP1
chr77551734375517413+3'-UTR,CDS3.582384.76162K562IGF2BP2
chr77551800475518107+3'-UTR4.6283218.30956HepG2AKAP1
chr77551751875517585+3'-UTR,CDS3.163895.78757K562UPF1
chr77551779475517827+3'-UTR3.222956.45876K562YBX3
chr77551802275518150+3'-UTR4.346823.94601K562PCBP1
chr77551809675518159+3'-UTR4.308748.88091HepG2LARP4
chr77551782775517847+3'-UTR4.286284.98640K562YBX3
chr77551747075517556+3'-UTR,CDS3.885874.99078K562SND1
chr77551740875517584+3'-UTR,CDS3.434485.08461K562IGF2BP1
chr77551816275518234+3'-UTR5.3942318.64574K562PUM2
chr77551750675517549+3'-UTR,CDS3.891363.45716HepG2AKAP1
chr77551768475517729+3'-UTR4.048143.43253K562YBX3
chr77551810175518181+3'-UTR6.1757019.62541HepG2UPF1
chr77551777575517844+3'-UTR4.687176.23478HepG2AKAP1
chr77551804875518094+3'-UTR4.659696.79809K562PABPC4
chr77551811675518226+3'-UTR4.5658320.07592K562UPF1
chr77550837675508478+5'-UTR,CDS,intron-Distal3.806113.59926K562DDX3X
chr77551126975511312+5'-UTR,CDS,intron-Distal3.368996.80152K562YBX3
chr77550842275508477+5'-UTR,CDS,intron-Distal5.1289229.72166HepG2DDX3X
chr77550835575508422+5'-UTR,CDS,intron-Distal4.5122821.94029HepG2DDX3X
chr77551125875511269+5'-UTR,CDS,intron-Distal4.096654.30417K562YBX3
chr77551131275511392+5'-UTR,CDS,intron-Distal3.586838.84704K562YBX3
chr77551123575511258+5'-UTR,CDS,intron-Distal4.2397210.21839K562YBX3
chr77550847875508564+5'-UTR,CDS,intron-Distal3.477283.74019K562DDX3X
chr77551117475511235+5'-UTR,CDS,intron-Distal3.5133510.75033K562YBX3
chr77550848375508557+5'-UTR,CDS,intron-Distal5.1990815.31047HepG2DDX3X
chr77550876175508877+intron-Distal4.164833.11802K562HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RHBDD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RHBDD2 is not available on ENCORE database.

  • 134 RBPs can affect the levels of RHBDD2.  








The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.





134 RBPs can affect the gene expression of RHBDD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RHBDD2ENSG00000005486.121028.97000746.924900.462102.662001.73710HepG2ABCF1
RHBDD2ENSG00000005486.121064.37870574.364800.8899020.6746019.35590HepG2ACO1
RHBDD2ENSG00000005486.121968.88250978.031801.0093012.1232011.08870HepG2AKAP1
RHBDD2ENSG00000005486.121099.90620666.496900.722604.071702.81420HepG2AKAP8
RHBDD2ENSG00000005486.121123.95920577.001600.9618022.4564020.58180HepG2AKAP8L
RHBDD2ENSG00000005486.121279.59460809.163800.661106.240205.08290HepG2ASCC1
RHBDD2ENSG00000005486.121290.24470764.448200.7551015.3249013.93930HepG2AUH
RHBDD2ENSG00000005486.12862.60540418.648201.042909.171907.42120HepG2BCCIP
RHBDD2ENSG00000005486.12553.42180363.689300.605602.460501.61380HepG2BCLAF1
RHBDD2ENSG00000005486.121634.19870469.405001.7996050.2810048.35590HepG2BOP1
RHBDD2ENSG00000005486.12412.00480768.78570-0.899904.788103.78420HepG2CIRBP
RHBDD2ENSG00000005486.121246.63490574.165701.1184035.8650034.09260HepG2CKAP4
RHBDD2ENSG00000005486.121509.70450476.604901.6633021.3671019.28810HepG2CNOT7
RHBDD2ENSG00000005486.12661.74360430.935800.618705.027404.12490HepG2CPSF6
RHBDD2ENSG00000005486.12911.66690614.777400.568304.016502.69210HepG2CPSF7
RHBDD2ENSG00000005486.12774.73150491.593500.656108.536007.52570HepG2CELF1
RHBDD2ENSG00000005486.12670.47590531.171000.335903.171802.28420HepG2DDX19B
RHBDD2ENSG00000005486.12447.71130314.836500.507903.332602.06140HepG2DDX1
RHBDD2ENSG00000005486.12523.81860345.428100.600604.583103.73490HepG2DDX21
RHBDD2ENSG00000005486.122585.66000936.718501.4647031.9850030.11340HepG2DDX3X
RHBDD2ENSG00000005486.12757.34590411.661500.879406.191605.08880HepG2DDX55
RHBDD2ENSG00000005486.12882.95520489.360400.851302.486301.56040HepG2DDX59
RHBDD2ENSG00000005486.12902.70250568.998900.665706.768705.24340HepG2DDX5
RHBDD2ENSG00000005486.121654.48340805.042101.039108.352707.33410HepG2DDX6
RHBDD2ENSG00000005486.12438.37250297.756200.557903.821602.67820HepG2DHX30
RHBDD2ENSG00000005486.12775.52630549.492300.497005.447004.55450HepG2DKC1
RHBDD2ENSG00000005486.12755.11880308.710201.2904026.5212024.59300HepG2DNAJC21
RHBDD2ENSG00000005486.12628.40230306.007701.0380019.8349018.23920HepG2DNAJC2
RHBDD2ENSG00000005486.12614.08970354.048400.794403.785002.48080HepG2EFTUD2
RHBDD2ENSG00000005486.12811.45680566.358200.518704.320102.86830HepG2EIF2S2
RHBDD2ENSG00000005486.121518.14830877.736400.7904011.8859010.78070HepG2ETF1
RHBDD2ENSG00000005486.12956.69660561.191100.769507.989206.58090HepG2EWSR1
RHBDD2ENSG00000005486.12462.92570308.267400.586503.026101.79580HepG2FAM120A
RHBDD2ENSG00000005486.12353.93600663.94940-0.907608.349107.02130HepG2FUBP3
RHBDD2ENSG00000005486.12654.18380327.582600.997706.499504.84180HepG2FUS
RHBDD2ENSG00000005486.121590.61360800.143500.9912013.5368012.12790HepG2G3BP1
RHBDD2ENSG00000005486.12580.08910849.83590-0.550902.343201.52770HepG2G3BP2
RHBDD2ENSG00000005486.12586.45460306.977300.933806.396605.03750HepG2GEMIN5
RHBDD2ENSG00000005486.12705.53610548.308900.363603.361402.29080HepG2HDGF
RHBDD2ENSG00000005486.12627.64730403.604000.636902.935901.52320HepG2HNRNPA0
RHBDD2ENSG00000005486.12462.82770311.668000.570403.919703.17030HepG2HNRNPA1
RHBDD2ENSG00000005486.12692.42700394.063500.813104.980103.08160HepG2HNRNPAB
RHBDD2ENSG00000005486.12928.94050346.680801.421904.546403.67270HepG2HNRNPC
RHBDD2ENSG00000005486.12964.56820634.564100.604009.303508.08590HepG2HNRNPF
RHBDD2ENSG00000005486.12347.86370810.89850-1.221006.258205.23650HepG2HNRNPK
RHBDD2ENSG00000005486.12754.20600466.175400.694006.117005.22090HepG2HNRNPLL
RHBDD2ENSG00000005486.12801.32350344.388201.2182025.4838023.79680HepG2HNRNPU
RHBDD2ENSG00000005486.12841.87070624.866400.430004.012203.15480HepG2IGF2BP1
RHBDD2ENSG00000005486.121566.72670813.224700.9459013.3960012.03640HepG2IGF2BP2
RHBDD2ENSG00000005486.12462.75260351.779800.395503.343902.54380HepG2ILF2
RHBDD2ENSG00000005486.12657.54880524.995200.324702.886801.85190HepG2KIF1C
RHBDD2ENSG00000005486.121522.13260699.205101.122208.810907.32350HepG2LARP4
RHBDD2ENSG00000005486.121375.10030863.170100.671706.109005.14210HepG2MAGOH
RHBDD2ENSG00000005486.121496.56090867.911000.785908.261207.22070HepG2MATR3
RHBDD2ENSG00000005486.12575.72020360.818100.674003.089401.97550HepG2METAP2
RHBDD2ENSG00000005486.121028.69690610.053500.753709.004207.62430HepG2MSI2
RHBDD2ENSG00000005486.122021.37890888.281901.1862019.9404018.34220HepG2NCBP2
RHBDD2ENSG00000005486.121042.78670687.409900.601102.770101.33970HepG2NKRF
RHBDD2ENSG00000005486.12758.52190524.177300.533003.197602.38040HepG2NOL12
RHBDD2ENSG00000005486.12573.17580330.747100.793104.895603.01400HepG2NOLC1
RHBDD2ENSG00000005486.12772.24950378.230701.029705.586504.00210HepG2NONO
RHBDD2ENSG00000005486.12776.99300435.801500.834105.123903.88550HepG2PABPC1
RHBDD2ENSG00000005486.12411.97340285.145000.530803.559302.16170HepG2PKM
RHBDD2ENSG00000005486.12425.48970307.165400.470002.400501.70980HepG2PPIL4
RHBDD2ENSG00000005486.12655.68180524.236500.322702.202101.50470HepG2PRPF4
RHBDD2ENSG00000005486.12600.19240317.330500.919307.230205.99630HepG2PRPF8
RHBDD2ENSG00000005486.121398.53410850.284500.7178015.2005014.11730HepG2PTBP1
RHBDD2ENSG00000005486.12909.41370500.362800.861908.553807.58130HepG2PUF60
RHBDD2ENSG00000005486.121188.72060531.145201.1621038.2243036.53870HepG2PUM1
RHBDD2ENSG00000005486.12922.53990530.764700.797405.004504.11670HepG2PUM2
RHBDD2ENSG00000005486.121056.76400585.017000.8530019.0368017.68170HepG2PUS1
RHBDD2ENSG00000005486.12519.05840315.982000.716004.283802.09670HepG2RBM14
RHBDD2ENSG00000005486.121078.19790835.773800.367302.998202.30020HepG2RBM25
RHBDD2ENSG00000005486.121336.44700946.297400.497907.224706.42170HepG2NELFE
RHBDD2ENSG00000005486.12719.79090881.32490-0.292102.506301.91650HepG2RECQL
RHBDD2ENSG00000005486.12693.25520294.066101.237108.083606.54060HepG2RPS10
RHBDD2ENSG00000005486.12833.87820335.553401.3132022.7962021.30010HepG2RPS19
RHBDD2ENSG00000005486.12798.51540396.266101.010805.470104.36670HepG2RPS2
RHBDD2ENSG00000005486.12689.36320479.149500.524702.064401.37340HepG2RPS3A
RHBDD2ENSG00000005486.12481.92390306.688300.651906.858005.91180HepG2SAFB2
RHBDD2ENSG00000005486.121631.74940763.118901.0963013.0710011.53880HepG2SF3A3
RHBDD2ENSG00000005486.12835.92340461.415900.857203.612602.81550HepG2SF3B1
RHBDD2ENSG00000005486.12499.03270214.764401.216303.564101.86670HepG2SFPQ
RHBDD2ENSG00000005486.12610.02830479.745100.346502.804002.09730HepG2SLBP
RHBDD2ENSG00000005486.12615.06490357.642600.7821011.6172010.44130HepG2SMN1
RHBDD2ENSG00000005486.12609.08240305.920500.993405.872704.43900HepG2SMNDC1
RHBDD2ENSG00000005486.12383.35360197.822900.954402.699301.40870HepG2SNRNP200
RHBDD2ENSG00000005486.121853.22630513.408101.8518015.2859013.46480HepG2SNRNP70
RHBDD2ENSG00000005486.12969.13820828.574000.226001.725601.30110HepG2SRFBP1
RHBDD2ENSG00000005486.121191.64620924.032500.366804.291503.73420HepG2SRSF1
RHBDD2ENSG00000005486.121467.87730494.020901.5710061.1449058.74600HepG2SRSF5
RHBDD2ENSG00000005486.12876.04930623.431700.490706.326705.34440HepG2SRSF7
RHBDD2ENSG00000005486.12736.68090417.001200.820904.503703.06640HepG2STIP1
RHBDD2ENSG00000005486.12751.49110561.850300.419504.219203.48060HepG2SUCLG1
RHBDD2ENSG00000005486.12816.59610508.975700.681907.213305.74710HepG2SUPT6H
RHBDD2ENSG00000005486.121174.14500409.735101.5187021.5098019.94370HepG2SUPV3L1
RHBDD2ENSG00000005486.12515.29000830.52610-0.688609.131108.20800HepG2TAF15
RHBDD2ENSG00000005486.12846.92720454.402700.8982010.885609.59060HepG2TARDBP
RHBDD2ENSG00000005486.12820.56420334.608101.2940012.2659011.34340HepG2TIAL1
RHBDD2ENSG00000005486.12860.25900337.630801.3492035.1312033.40600HepG2TRIM56
RHBDD2ENSG00000005486.121006.38660488.813601.041705.707004.39510HepG2TUFM
RHBDD2ENSG00000005486.12834.65320229.762901.860907.370705.67990HepG2U2AF2
RHBDD2ENSG00000005486.12925.91840517.388500.839507.124005.75540HepG2UBE2L3
RHBDD2ENSG00000005486.121405.29180676.770501.0540032.8849031.03480HepG2UPF1
RHBDD2ENSG00000005486.12875.04110695.619900.331003.067701.97060HepG2UTP18
RHBDD2ENSG00000005486.12952.31750653.394200.543407.789906.86620HepG2UTP3
RHBDD2ENSG00000005486.12613.79770329.009700.899503.592902.38530HepG2XRCC6
RHBDD2ENSG00000005486.12574.11840403.341300.509202.046801.41570HepG2XRN2
RHBDD2ENSG00000005486.12815.00660517.357800.6555010.275709.11840HepG2ZC3H8
RHBDD2ENSG00000005486.121090.36570744.317000.5507010.087109.20710HepG2ZNF622
RHBDD2ENSG00000005486.121660.383201231.743200.430705.189604.45280K562AGGF1
RHBDD2ENSG00000005486.121715.822901353.608700.342003.245602.16020K562AKAP8
RHBDD2ENSG00000005486.121824.084301471.913400.309402.385601.30540K562CCDC124
RHBDD2ENSG00000005486.12546.60760319.523200.774507.586406.28200K562CPSF6
RHBDD2ENSG00000005486.12945.54270472.005001.0022017.1085014.40810K562DDX3X
RHBDD2ENSG00000005486.121731.516101379.044900.328303.835002.78060K562DKC1
RHBDD2ENSG00000005486.12456.99520319.490700.516302.796601.87850K562EFTUD2
RHBDD2ENSG00000005486.121162.65170444.732201.3863038.6518036.58110K562EIF2S2
RHBDD2ENSG00000005486.12744.80200493.155600.594704.869303.77710K562EIF4A3
RHBDD2ENSG00000005486.12550.16220363.107500.599404.760203.62630K562FIP1L1
RHBDD2ENSG00000005486.12509.09610325.141300.646804.798503.67000K562FMR1
RHBDD2ENSG00000005486.12381.88190275.601300.470402.420601.56980K562FTO
RHBDD2ENSG00000005486.1296.99990169.62240-0.806302.273401.64040K562G3BP2
RHBDD2ENSG00000005486.12553.79160320.324900.789705.558403.52250K562GEMIN5
RHBDD2ENSG00000005486.12417.29270305.051900.451902.451701.70240K562GPKOW
RHBDD2ENSG00000005486.12910.24040592.569500.619205.953704.84200K562GRSF1
RHBDD2ENSG00000005486.12684.53340402.368500.766504.574803.82540K562HNRNPC
RHBDD2ENSG00000005486.121229.09650492.267801.3200025.1166022.95420K562HSPD1
RHBDD2ENSG00000005486.12702.25220287.483301.288407.534505.52630K562IGF2BP2
RHBDD2ENSG00000005486.12463.41660292.285400.664804.771403.12040K562IGF2BP3
RHBDD2ENSG00000005486.12501.73970301.826800.733105.204904.04400K562MAGOH
RHBDD2ENSG00000005486.121728.866801302.047800.408904.736003.21510K562MAK16
RHBDD2ENSG00000005486.12491.99020297.770600.724306.205204.86860K562METAP2
RHBDD2ENSG00000005486.12536.73880315.139000.768105.043403.15570K562NONO
RHBDD2ENSG00000005486.121111.95160614.829800.854703.522402.58360K562PCBP3
RHBDD2ENSG00000005486.12881.47400471.577700.9023013.7644012.04210K562POLR2G
RHBDD2ENSG00000005486.12727.89010412.228600.820209.102807.39060K562PPIG
RHBDD2ENSG00000005486.121356.36030735.038700.883703.067801.50970K562PPP1R8
RHBDD2ENSG00000005486.12621.96430360.823200.785405.567004.21640K562PSIP1
RHBDD2ENSG00000005486.12484.69270293.266600.724805.988405.04350K562PTBP1
RHBDD2ENSG00000005486.121371.53230947.595100.533305.550604.17320K562PUM2
RHBDD2ENSG00000005486.12415.30480281.040000.563303.569502.60650K562RBM22
RHBDD2ENSG00000005486.12553.99180329.482200.749604.772603.46800K562RCC2
RHBDD2ENSG00000005486.12451.87320316.591600.513202.467001.69640K562RPS19
RHBDD2ENSG00000005486.12923.08840565.415700.707102.412701.32150K562SF1
RHBDD2ENSG00000005486.12909.09290691.129600.395403.911102.95100K562SF3A3
RHBDD2ENSG00000005486.121575.56850689.286201.192606.453504.12260K562SFPQ
RHBDD2ENSG00000005486.12536.96800312.311500.781804.358902.98710K562SRFBP1
RHBDD2ENSG00000005486.12548.46990287.533500.931609.139007.86370K562SRSF1
RHBDD2ENSG00000005486.12719.27880412.515200.802006.543004.80420K562SRSF4
RHBDD2ENSG00000005486.12521.00570271.638900.939503.024701.91710K562SRSF5
RHBDD2ENSG00000005486.12651.32230290.928401.162609.721608.26640K562TARDBP
RHBDD2ENSG00000005486.12541.65710280.652800.948509.925708.26140K562TIA1
RHBDD2ENSG00000005486.12531.62100275.579600.947803.733102.43670K562TRA2A
RHBDD2ENSG00000005486.12477.82960318.496100.585103.518502.36320K562UCHL5
RHBDD2ENSG00000005486.121006.44160742.671900.438405.403404.43480K562UPF1
RHBDD2ENSG00000005486.12513.09730660.82220-0.365003.402602.47350K562WDR43
RHBDD2ENSG00000005486.12529.63220324.459000.706904.997603.19380K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RHBDD2 is not available on ENCORE database.





12 RBPs can affect the splicing of RHBDD2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.210000.000000.00000excludedK562AKAP8L
SERHBDD2ENSG00000005486.12chr7+7551068275510804755084897550857875511146755115540.315000.000010.00060includedHepG2HNRNPK
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.168000.000310.03574excludedHepG2DDX59
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.504000.000000.00000excludedHepG2U2AF2
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.170000.000000.00009excludedHepG2AKAP1
SERHBDD2ENSG00000005486.12chr7+7551068275510804755084897550857875511146755115540.419000.000000.00002includedK562FXR1
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.145000.000040.03000excludedHepG2UPF1
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.183000.000120.01294excludedHepG2FTO
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.417000.000040.01248excludedHepG2HNRNPUL1
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.388000.000430.03624excludedK562HNRNPUL1
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.141000.000090.00504excludedK562UTP18
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.132000.002760.05858excludedK562RBM15
SERHBDD2ENSG00000005486.12chr7+755106827551080475508489755085787551114675511554-0.182000.000000.00001excludedK562AGGF1
SERHBDD2ENSG00000005486.12chr7+7551068275510804755084897550857875511146755115540.333000.001390.05778includedK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RHBDD2 is not avaliable on ENCORE database.